data_1B24 # _entry.id 1B24 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.362 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1B24 pdb_00001b24 10.2210/pdb1b24/pdb RCSB RCSB000208 ? ? WWPDB D_1000000208 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1B24 _pdbx_database_status.recvd_initial_deposition_date 1998-12-03 _pdbx_database_status.deposit_site BNL _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Van Roey, P.' 1 'Silva, G.H.' 2 # _citation.id primary _citation.title 'Crystal structure of the thermostable archaeal intron-encoded endonuclease I-DmoI.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 286 _citation.page_first 1123 _citation.page_last 1136 _citation.year 1999 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 10047486 _citation.pdbx_database_id_DOI 10.1006/jmbi.1998.2519 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Silva, G.H.' 1 ? primary 'Dalgaard, J.Z.' 2 ? primary 'Belfort, M.' 3 ? primary 'Van Roey, P.' 4 ? # _cell.entry_id 1B24 _cell.length_a 93.730 _cell.length_b 37.220 _cell.length_c 56.280 _cell.angle_alpha 90.00 _cell.angle_beta 112.80 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1B24 _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Homing endonuclease I-DmoI' 22181.473 1 3.1.-.- ? ? 'SELENOMETHIONYL PROTEIN' 2 water nat water 18.015 78 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;MHNNENVSGISAYLLGLIIGDGGLYKLKYKGNRSEYRVVITQKSENLIKQHIAPL(MSE)QFLIDELNVKSKIQIVKGDT RYELRVSSKKLYYYFAN(MSE)LERIRLFN(MSE)REQIAFIKGLYVAEGDKTLKRLRIWNKNKALLEIVSRWLNNLGVR NTIHLDDHRHGVYVLNISLRDRIKFVHTILSSHLNPLPPE ; _entity_poly.pdbx_seq_one_letter_code_can ;MHNNENVSGISAYLLGLIIGDGGLYKLKYKGNRSEYRVVITQKSENLIKQHIAPLMQFLIDELNVKSKIQIVKGDTRYEL RVSSKKLYYYFANMLERIRLFNMREQIAFIKGLYVAEGDKTLKRLRIWNKNKALLEIVSRWLNNLGVRNTIHLDDHRHGV YVLNISLRDRIKFVHTILSSHLNPLPPE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 HIS n 1 3 ASN n 1 4 ASN n 1 5 GLU n 1 6 ASN n 1 7 VAL n 1 8 SER n 1 9 GLY n 1 10 ILE n 1 11 SER n 1 12 ALA n 1 13 TYR n 1 14 LEU n 1 15 LEU n 1 16 GLY n 1 17 LEU n 1 18 ILE n 1 19 ILE n 1 20 GLY n 1 21 ASP n 1 22 GLY n 1 23 GLY n 1 24 LEU n 1 25 TYR n 1 26 LYS n 1 27 LEU n 1 28 LYS n 1 29 TYR n 1 30 LYS n 1 31 GLY n 1 32 ASN n 1 33 ARG n 1 34 SER n 1 35 GLU n 1 36 TYR n 1 37 ARG n 1 38 VAL n 1 39 VAL n 1 40 ILE n 1 41 THR n 1 42 GLN n 1 43 LYS n 1 44 SER n 1 45 GLU n 1 46 ASN n 1 47 LEU n 1 48 ILE n 1 49 LYS n 1 50 GLN n 1 51 HIS n 1 52 ILE n 1 53 ALA n 1 54 PRO n 1 55 LEU n 1 56 MSE n 1 57 GLN n 1 58 PHE n 1 59 LEU n 1 60 ILE n 1 61 ASP n 1 62 GLU n 1 63 LEU n 1 64 ASN n 1 65 VAL n 1 66 LYS n 1 67 SER n 1 68 LYS n 1 69 ILE n 1 70 GLN n 1 71 ILE n 1 72 VAL n 1 73 LYS n 1 74 GLY n 1 75 ASP n 1 76 THR n 1 77 ARG n 1 78 TYR n 1 79 GLU n 1 80 LEU n 1 81 ARG n 1 82 VAL n 1 83 SER n 1 84 SER n 1 85 LYS n 1 86 LYS n 1 87 LEU n 1 88 TYR n 1 89 TYR n 1 90 TYR n 1 91 PHE n 1 92 ALA n 1 93 ASN n 1 94 MSE n 1 95 LEU n 1 96 GLU n 1 97 ARG n 1 98 ILE n 1 99 ARG n 1 100 LEU n 1 101 PHE n 1 102 ASN n 1 103 MSE n 1 104 ARG n 1 105 GLU n 1 106 GLN n 1 107 ILE n 1 108 ALA n 1 109 PHE n 1 110 ILE n 1 111 LYS n 1 112 GLY n 1 113 LEU n 1 114 TYR n 1 115 VAL n 1 116 ALA n 1 117 GLU n 1 118 GLY n 1 119 ASP n 1 120 LYS n 1 121 THR n 1 122 LEU n 1 123 LYS n 1 124 ARG n 1 125 LEU n 1 126 ARG n 1 127 ILE n 1 128 TRP n 1 129 ASN n 1 130 LYS n 1 131 ASN n 1 132 LYS n 1 133 ALA n 1 134 LEU n 1 135 LEU n 1 136 GLU n 1 137 ILE n 1 138 VAL n 1 139 SER n 1 140 ARG n 1 141 TRP n 1 142 LEU n 1 143 ASN n 1 144 ASN n 1 145 LEU n 1 146 GLY n 1 147 VAL n 1 148 ARG n 1 149 ASN n 1 150 THR n 1 151 ILE n 1 152 HIS n 1 153 LEU n 1 154 ASP n 1 155 ASP n 1 156 HIS n 1 157 ARG n 1 158 HIS n 1 159 GLY n 1 160 VAL n 1 161 TYR n 1 162 VAL n 1 163 LEU n 1 164 ASN n 1 165 ILE n 1 166 SER n 1 167 LEU n 1 168 ARG n 1 169 ASP n 1 170 ARG n 1 171 ILE n 1 172 LYS n 1 173 PHE n 1 174 VAL n 1 175 HIS n 1 176 THR n 1 177 ILE n 1 178 LEU n 1 179 SER n 1 180 SER n 1 181 HIS n 1 182 LEU n 1 183 ASN n 1 184 PRO n 1 185 LEU n 1 186 PRO n 1 187 PRO n 1 188 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 188 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Desulfurococcus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Desulfurococcus mobilis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2275 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'DL41(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'SELENOMETHIONINE AUXOTROPH' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code DMO1_DESMO _struct_ref.pdbx_db_accession P21505 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MHNNENVSGISAYLLGLIIGDGGLYKLKYKGNRSEYRVVITQKSENLIKQHIAPLMQFLIDELNVKSKIQIVKGDTRYEL RVSSKKLYYYFANMLERIRLFNMREQIAFIKGLYVAEGDKTLKRLRIWNKNKALLEIVSRWLNNLGVRNTIHLDDHRHGV YVLNISLRDRIKFVHTILSSHLNPLPPE ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1B24 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 188 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P21505 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 188 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 188 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1B24 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.01 _exptl_crystal.density_percent_sol 33.3 _exptl_crystal.description 'MAD DATA TREATED AS A SPECIAL CASE OF MIR' # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details ;HANGING DROP VAPOR-DIFFUSION METHOD: 4UL I-DMOI PROTEIN 1UL 20MM N-OCTYL-B- GLUCOPYRANOSIDE 4UL PRECIPITATING BUFFER: 30% PEG 3350 200MM SODIUM ACETATE 100MM TRIS-HCL PH 8.5, VAPOR DIFFUSION, HANGING DROP ; _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 '4UL I-DMOI PROTEIN' ? ? ? 1 2 2 '1UL 20MM N-OCTYL-B-GLUCOPYRANOSIDE' ? ? ? 1 3 2 '4UL PRECIPITATING BUFFER' ? ? ? 1 4 2 '30% PEG 3350' ? ? ? 1 5 2 '200MM SODIUM ACETATE' ? ? ? 1 6 2 '100MM TRIS-HCL PH 8.5' ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type BRANDEIS _diffrn_detector.pdbx_collection_date 1997-09 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.9300 1.0 2 0.9785 1.0 3 0.9789 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X12C' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X12C _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9300,0.9785,0.9789 # _reflns.entry_id 1B24 _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 20.0 _reflns.d_resolution_high 2.2 _reflns.number_obs 8884 _reflns.number_all ? _reflns.percent_possible_obs 98.5 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.059 _reflns.pdbx_netI_over_sigmaI 32.3 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 11.1 _reflns.R_free_details ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.20 _reflns_shell.d_res_low 2.28 _reflns_shell.percent_possible_all 97.4 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.070 _reflns_shell.meanI_over_sigI_obs 24.7 _reflns_shell.pdbx_redundancy 6 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1B24 _refine.ls_number_reflns_obs 8878 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 10.0 _refine.ls_d_res_high 2.2 _refine.ls_percent_reflns_obs 98.7 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2180000 _refine.ls_R_factor_R_free 0.3240000 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.0 _refine.ls_number_reflns_R_free 887 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1427 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 78 _refine_hist.number_atoms_total 1505 _refine_hist.d_res_high 2.2 _refine_hist.d_res_low 10.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.007 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.285 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d 26.23 ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d 0.609 ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 8 _refine_ls_shell.d_res_high 2.20 _refine_ls_shell.d_res_low 2.30 _refine_ls_shell.number_reflns_R_work 737 _refine_ls_shell.R_factor_R_work 0.2996000 _refine_ls_shell.percent_reflns_obs 98.7 _refine_ls_shell.R_factor_R_free 0.3613000 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free 10.0 _refine_ls_shell.number_reflns_R_free 80 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM TOPHCSDX.PRO 'X-RAY DIFFRACTION' 2 PARAM19.SOL TOPH19.SOL 'X-RAY DIFFRACTION' 3 TOPH19.PEP ? 'X-RAY DIFFRACTION' 4 PARHCSDX.PRO ? 'X-RAY DIFFRACTION' # _struct.entry_id 1B24 _struct.title 'I-DMOI, INTRON-ENCODED ENDONUCLEASE' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1B24 _struct_keywords.pdbx_keywords INTRON-ENCODED _struct_keywords.text 'INTRON-ENCODED, ENDONUCLEASE, HOMING, THERMOSTABLE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 8 ? GLY A 20 ? SER A 8 GLY A 20 1 ? 13 HELX_P HELX_P2 2 GLU A 45 ? GLN A 50 ? GLU A 45 GLN A 50 1 ? 6 HELX_P HELX_P3 3 PRO A 54 ? GLU A 62 ? PRO A 54 GLU A 62 5 ? 9 HELX_P HELX_P4 4 LYS A 85 ? ALA A 92 ? LYS A 85 ALA A 92 1 ? 8 HELX_P HELX_P5 5 ILE A 98 ? LEU A 100 ? ILE A 98 LEU A 100 5 ? 3 HELX_P HELX_P6 6 GLU A 105 ? GLU A 117 ? GLU A 105 GLU A 117 1 ? 13 HELX_P HELX_P7 7 LYS A 132 ? LEU A 145 ? LYS A 132 LEU A 145 1 ? 14 HELX_P HELX_P8 8 LEU A 167 ? THR A 176 ? LEU A 167 THR A 176 5 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A LEU 55 C ? ? ? 1_555 A MSE 56 N ? ? A LEU 55 A MSE 56 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale2 covale both ? A MSE 56 C ? ? ? 1_555 A GLN 57 N ? ? A MSE 56 A GLN 57 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale3 covale both ? A ASN 93 C ? ? ? 1_555 A MSE 94 N ? ? A ASN 93 A MSE 94 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale4 covale both ? A MSE 94 C ? ? ? 1_555 A LEU 95 N ? ? A MSE 94 A LEU 95 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale5 covale both ? A ASN 102 C ? ? ? 1_555 A MSE 103 N ? ? A ASN 102 A MSE 103 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale6 covale both ? A MSE 103 C ? ? ? 1_555 A ARG 104 N ? ? A MSE 103 A ARG 104 1_555 ? ? ? ? ? ? ? 1.328 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLY A 22 ? LYS A 28 ? GLY A 22 LYS A 28 A 2 SER A 34 ? GLN A 42 ? SER A 34 GLN A 42 A 3 TYR A 78 ? SER A 83 ? TYR A 78 SER A 83 A 4 GLN A 70 ? LYS A 73 ? GLN A 70 LYS A 73 B 1 ARG A 126 ? ASN A 129 ? ARG A 126 ASN A 129 B 2 VAL A 160 ? ILE A 165 ? VAL A 160 ILE A 165 B 3 ASN A 149 ? ASP A 155 ? ASN A 149 ASP A 155 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O GLY A 23 ? O GLY A 23 N VAL A 39 ? N VAL A 39 A 2 3 O VAL A 38 ? O VAL A 38 N VAL A 82 ? N VAL A 82 A 3 4 O GLU A 79 ? O GLU A 79 N VAL A 72 ? N VAL A 72 B 1 2 O ILE A 127 ? O ILE A 127 N LEU A 163 ? N LEU A 163 B 2 3 O VAL A 160 ? O VAL A 160 N ASP A 155 ? N ASP A 155 # _database_PDB_matrix.entry_id 1B24 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1B24 _atom_sites.fract_transf_matrix[1][1] 0.010669 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.004485 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.026867 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019274 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 HIS 2 2 ? ? ? A . n A 1 3 ASN 3 3 ? ? ? A . n A 1 4 ASN 4 4 ? ? ? A . n A 1 5 GLU 5 5 ? ? ? A . n A 1 6 ASN 6 6 ? ? ? A . n A 1 7 VAL 7 7 7 VAL VAL A . n A 1 8 SER 8 8 8 SER SER A . n A 1 9 GLY 9 9 9 GLY GLY A . n A 1 10 ILE 10 10 10 ILE ILE A . n A 1 11 SER 11 11 11 SER SER A . n A 1 12 ALA 12 12 12 ALA ALA A . n A 1 13 TYR 13 13 13 TYR TYR A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 LEU 17 17 17 LEU LEU A . n A 1 18 ILE 18 18 18 ILE ILE A . n A 1 19 ILE 19 19 19 ILE ILE A . n A 1 20 GLY 20 20 20 GLY GLY A . n A 1 21 ASP 21 21 21 ASP ASP A . n A 1 22 GLY 22 22 22 GLY GLY A . n A 1 23 GLY 23 23 23 GLY GLY A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 TYR 25 25 25 TYR TYR A . n A 1 26 LYS 26 26 26 LYS LYS A . n A 1 27 LEU 27 27 27 LEU LEU A . n A 1 28 LYS 28 28 28 LYS LYS A . n A 1 29 TYR 29 29 29 TYR TYR A . n A 1 30 LYS 30 30 30 LYS LYS A . n A 1 31 GLY 31 31 31 GLY GLY A . n A 1 32 ASN 32 32 32 ASN ASN A . n A 1 33 ARG 33 33 33 ARG ARG A . n A 1 34 SER 34 34 34 SER SER A . n A 1 35 GLU 35 35 35 GLU GLU A . n A 1 36 TYR 36 36 36 TYR TYR A . n A 1 37 ARG 37 37 37 ARG ARG A . n A 1 38 VAL 38 38 38 VAL VAL A . n A 1 39 VAL 39 39 39 VAL VAL A . n A 1 40 ILE 40 40 40 ILE ILE A . n A 1 41 THR 41 41 41 THR THR A . n A 1 42 GLN 42 42 42 GLN GLN A . n A 1 43 LYS 43 43 43 LYS LYS A . n A 1 44 SER 44 44 44 SER SER A . n A 1 45 GLU 45 45 45 GLU GLU A . n A 1 46 ASN 46 46 46 ASN ASN A . n A 1 47 LEU 47 47 47 LEU LEU A . n A 1 48 ILE 48 48 48 ILE ILE A . n A 1 49 LYS 49 49 49 LYS LYS A . n A 1 50 GLN 50 50 50 GLN GLN A . n A 1 51 HIS 51 51 51 HIS HIS A . n A 1 52 ILE 52 52 52 ILE ILE A . n A 1 53 ALA 53 53 53 ALA ALA A . n A 1 54 PRO 54 54 54 PRO PRO A . n A 1 55 LEU 55 55 55 LEU LEU A . n A 1 56 MSE 56 56 56 MSE MSE A . n A 1 57 GLN 57 57 57 GLN GLN A . n A 1 58 PHE 58 58 58 PHE PHE A . n A 1 59 LEU 59 59 59 LEU LEU A . n A 1 60 ILE 60 60 60 ILE ILE A . n A 1 61 ASP 61 61 61 ASP ASP A . n A 1 62 GLU 62 62 62 GLU GLU A . n A 1 63 LEU 63 63 63 LEU LEU A . n A 1 64 ASN 64 64 64 ASN ASN A . n A 1 65 VAL 65 65 65 VAL VAL A . n A 1 66 LYS 66 66 66 LYS LYS A . n A 1 67 SER 67 67 67 SER SER A . n A 1 68 LYS 68 68 68 LYS LYS A . n A 1 69 ILE 69 69 69 ILE ILE A . n A 1 70 GLN 70 70 70 GLN GLN A . n A 1 71 ILE 71 71 71 ILE ILE A . n A 1 72 VAL 72 72 72 VAL VAL A . n A 1 73 LYS 73 73 73 LYS LYS A . n A 1 74 GLY 74 74 74 GLY GLY A . n A 1 75 ASP 75 75 75 ASP ASP A . n A 1 76 THR 76 76 76 THR THR A . n A 1 77 ARG 77 77 77 ARG ARG A . n A 1 78 TYR 78 78 78 TYR TYR A . n A 1 79 GLU 79 79 79 GLU GLU A . n A 1 80 LEU 80 80 80 LEU LEU A . n A 1 81 ARG 81 81 81 ARG ARG A . n A 1 82 VAL 82 82 82 VAL VAL A . n A 1 83 SER 83 83 83 SER SER A . n A 1 84 SER 84 84 84 SER SER A . n A 1 85 LYS 85 85 85 LYS LYS A . n A 1 86 LYS 86 86 86 LYS LYS A . n A 1 87 LEU 87 87 87 LEU LEU A . n A 1 88 TYR 88 88 88 TYR TYR A . n A 1 89 TYR 89 89 89 TYR TYR A . n A 1 90 TYR 90 90 90 TYR TYR A . n A 1 91 PHE 91 91 91 PHE PHE A . n A 1 92 ALA 92 92 92 ALA ALA A . n A 1 93 ASN 93 93 93 ASN ASN A . n A 1 94 MSE 94 94 94 MSE MSE A . n A 1 95 LEU 95 95 95 LEU LEU A . n A 1 96 GLU 96 96 96 GLU GLU A . n A 1 97 ARG 97 97 97 ARG ARG A . n A 1 98 ILE 98 98 98 ILE ILE A . n A 1 99 ARG 99 99 99 ARG ARG A . n A 1 100 LEU 100 100 100 LEU LEU A . n A 1 101 PHE 101 101 101 PHE PHE A . n A 1 102 ASN 102 102 102 ASN ASN A . n A 1 103 MSE 103 103 103 MSE MSE A . n A 1 104 ARG 104 104 104 ARG ARG A . n A 1 105 GLU 105 105 105 GLU GLU A . n A 1 106 GLN 106 106 106 GLN GLN A . n A 1 107 ILE 107 107 107 ILE ILE A . n A 1 108 ALA 108 108 108 ALA ALA A . n A 1 109 PHE 109 109 109 PHE PHE A . n A 1 110 ILE 110 110 110 ILE ILE A . n A 1 111 LYS 111 111 111 LYS LYS A . n A 1 112 GLY 112 112 112 GLY GLY A . n A 1 113 LEU 113 113 113 LEU LEU A . n A 1 114 TYR 114 114 114 TYR TYR A . n A 1 115 VAL 115 115 115 VAL VAL A . n A 1 116 ALA 116 116 116 ALA ALA A . n A 1 117 GLU 117 117 117 GLU GLU A . n A 1 118 GLY 118 118 118 GLY GLY A . n A 1 119 ASP 119 119 119 ASP ASP A . n A 1 120 LYS 120 120 120 LYS LYS A . n A 1 121 THR 121 121 121 THR THR A . n A 1 122 LEU 122 122 122 LEU LEU A . n A 1 123 LYS 123 123 123 LYS LYS A . n A 1 124 ARG 124 124 124 ARG ARG A . n A 1 125 LEU 125 125 125 LEU LEU A . n A 1 126 ARG 126 126 126 ARG ARG A . n A 1 127 ILE 127 127 127 ILE ILE A . n A 1 128 TRP 128 128 128 TRP TRP A . n A 1 129 ASN 129 129 129 ASN ASN A . n A 1 130 LYS 130 130 130 LYS LYS A . n A 1 131 ASN 131 131 131 ASN ASN A . n A 1 132 LYS 132 132 132 LYS LYS A . n A 1 133 ALA 133 133 133 ALA ALA A . n A 1 134 LEU 134 134 134 LEU LEU A . n A 1 135 LEU 135 135 135 LEU LEU A . n A 1 136 GLU 136 136 136 GLU GLU A . n A 1 137 ILE 137 137 137 ILE ILE A . n A 1 138 VAL 138 138 138 VAL VAL A . n A 1 139 SER 139 139 139 SER SER A . n A 1 140 ARG 140 140 140 ARG ARG A . n A 1 141 TRP 141 141 141 TRP TRP A . n A 1 142 LEU 142 142 142 LEU LEU A . n A 1 143 ASN 143 143 143 ASN ASN A . n A 1 144 ASN 144 144 144 ASN ASN A . n A 1 145 LEU 145 145 145 LEU LEU A . n A 1 146 GLY 146 146 146 GLY GLY A . n A 1 147 VAL 147 147 147 VAL VAL A . n A 1 148 ARG 148 148 148 ARG ARG A . n A 1 149 ASN 149 149 149 ASN ASN A . n A 1 150 THR 150 150 150 THR THR A . n A 1 151 ILE 151 151 151 ILE ILE A . n A 1 152 HIS 152 152 152 HIS HIS A . n A 1 153 LEU 153 153 153 LEU LEU A . n A 1 154 ASP 154 154 154 ASP ASP A . n A 1 155 ASP 155 155 155 ASP ASP A . n A 1 156 HIS 156 156 156 HIS HIS A . n A 1 157 ARG 157 157 157 ARG ARG A . n A 1 158 HIS 158 158 158 HIS HIS A . n A 1 159 GLY 159 159 159 GLY GLY A . n A 1 160 VAL 160 160 160 VAL VAL A . n A 1 161 TYR 161 161 161 TYR TYR A . n A 1 162 VAL 162 162 162 VAL VAL A . n A 1 163 LEU 163 163 163 LEU LEU A . n A 1 164 ASN 164 164 164 ASN ASN A . n A 1 165 ILE 165 165 165 ILE ILE A . n A 1 166 SER 166 166 166 SER SER A . n A 1 167 LEU 167 167 167 LEU LEU A . n A 1 168 ARG 168 168 168 ARG ARG A . n A 1 169 ASP 169 169 169 ASP ASP A . n A 1 170 ARG 170 170 170 ARG ARG A . n A 1 171 ILE 171 171 171 ILE ILE A . n A 1 172 LYS 172 172 172 LYS LYS A . n A 1 173 PHE 173 173 173 PHE PHE A . n A 1 174 VAL 174 174 174 VAL VAL A . n A 1 175 HIS 175 175 175 HIS HIS A . n A 1 176 THR 176 176 176 THR THR A . n A 1 177 ILE 177 177 177 ILE ILE A . n A 1 178 LEU 178 178 178 LEU LEU A . n A 1 179 SER 179 179 179 SER SER A . n A 1 180 SER 180 180 ? ? ? A . n A 1 181 HIS 181 181 ? ? ? A . n A 1 182 LEU 182 182 ? ? ? A . n A 1 183 ASN 183 183 ? ? ? A . n A 1 184 PRO 184 184 ? ? ? A . n A 1 185 LEU 185 185 ? ? ? A . n A 1 186 PRO 186 186 ? ? ? A . n A 1 187 PRO 187 187 ? ? ? A . n A 1 188 GLU 188 188 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 189 1 HOH HOH A . B 2 HOH 2 190 2 HOH HOH A . B 2 HOH 3 191 6 HOH HOH A . B 2 HOH 4 192 9 HOH HOH A . B 2 HOH 5 193 12 HOH HOH A . B 2 HOH 6 194 13 HOH HOH A . B 2 HOH 7 195 14 HOH HOH A . B 2 HOH 8 196 15 HOH HOH A . B 2 HOH 9 197 16 HOH HOH A . B 2 HOH 10 198 17 HOH HOH A . B 2 HOH 11 199 20 HOH HOH A . B 2 HOH 12 200 22 HOH HOH A . B 2 HOH 13 201 23 HOH HOH A . B 2 HOH 14 202 24 HOH HOH A . B 2 HOH 15 203 25 HOH HOH A . B 2 HOH 16 204 26 HOH HOH A . B 2 HOH 17 205 28 HOH HOH A . B 2 HOH 18 206 30 HOH HOH A . B 2 HOH 19 207 31 HOH HOH A . B 2 HOH 20 208 33 HOH HOH A . B 2 HOH 21 209 36 HOH HOH A . B 2 HOH 22 210 37 HOH HOH A . B 2 HOH 23 211 38 HOH HOH A . B 2 HOH 24 212 40 HOH HOH A . B 2 HOH 25 213 43 HOH HOH A . B 2 HOH 26 214 45 HOH HOH A . B 2 HOH 27 215 47 HOH HOH A . B 2 HOH 28 216 48 HOH HOH A . B 2 HOH 29 217 49 HOH HOH A . B 2 HOH 30 218 50 HOH HOH A . B 2 HOH 31 219 51 HOH HOH A . B 2 HOH 32 220 52 HOH HOH A . B 2 HOH 33 221 54 HOH HOH A . B 2 HOH 34 222 55 HOH HOH A . B 2 HOH 35 223 56 HOH HOH A . B 2 HOH 36 224 58 HOH HOH A . B 2 HOH 37 225 59 HOH HOH A . B 2 HOH 38 226 60 HOH HOH A . B 2 HOH 39 227 61 HOH HOH A . B 2 HOH 40 228 62 HOH HOH A . B 2 HOH 41 229 63 HOH HOH A . B 2 HOH 42 230 65 HOH HOH A . B 2 HOH 43 231 66 HOH HOH A . B 2 HOH 44 232 67 HOH HOH A . B 2 HOH 45 233 68 HOH HOH A . B 2 HOH 46 234 71 HOH HOH A . B 2 HOH 47 235 72 HOH HOH A . B 2 HOH 48 236 73 HOH HOH A . B 2 HOH 49 237 74 HOH HOH A . B 2 HOH 50 238 75 HOH HOH A . B 2 HOH 51 239 76 HOH HOH A . B 2 HOH 52 240 80 HOH HOH A . B 2 HOH 53 241 81 HOH HOH A . B 2 HOH 54 242 82 HOH HOH A . B 2 HOH 55 243 83 HOH HOH A . B 2 HOH 56 244 87 HOH HOH A . B 2 HOH 57 245 91 HOH HOH A . B 2 HOH 58 246 92 HOH HOH A . B 2 HOH 59 247 93 HOH HOH A . B 2 HOH 60 248 94 HOH HOH A . B 2 HOH 61 249 95 HOH HOH A . B 2 HOH 62 250 96 HOH HOH A . B 2 HOH 63 251 100 HOH HOH A . B 2 HOH 64 252 101 HOH HOH A . B 2 HOH 65 253 102 HOH HOH A . B 2 HOH 66 254 103 HOH HOH A . B 2 HOH 67 255 104 HOH HOH A . B 2 HOH 68 256 106 HOH HOH A . B 2 HOH 69 257 107 HOH HOH A . B 2 HOH 70 258 108 HOH HOH A . B 2 HOH 71 259 109 HOH HOH A . B 2 HOH 72 260 111 HOH HOH A . B 2 HOH 73 261 112 HOH HOH A . B 2 HOH 74 262 113 HOH HOH A . B 2 HOH 75 263 116 HOH HOH A . B 2 HOH 76 264 117 HOH HOH A . B 2 HOH 77 265 118 HOH HOH A . B 2 HOH 78 266 119 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 56 A MSE 56 ? MET 'modified residue' 2 A MSE 94 A MSE 94 ? MET 'modified residue' 3 A MSE 103 A MSE 103 ? MET 'modified residue' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1999-03-24 2 'Structure model' 1 1 2008-04-26 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-12-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' 5 4 'Structure model' 'Source and taxonomy' 6 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' entity 3 4 'Structure model' entity_src_gen 4 4 'Structure model' pdbx_struct_mod_residue 5 4 'Structure model' struct_conn 6 4 'Structure model' struct_ref 7 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_entity.pdbx_description' 4 4 'Structure model' '_entity.pdbx_ec' 5 4 'Structure model' '_entity_src_gen.pdbx_beg_seq_num' 6 4 'Structure model' '_entity_src_gen.pdbx_end_seq_num' 7 4 'Structure model' '_entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id' 8 4 'Structure model' '_entity_src_gen.pdbx_seq_type' 9 4 'Structure model' '_pdbx_struct_mod_residue.details' 10 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 11 4 'Structure model' '_struct_ref.pdbx_align_begin' 12 4 'Structure model' '_struct_ref.pdbx_seq_one_letter_code' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PHASES phasing . ? 1 X-PLOR refinement 3.851 ? 2 DENZO 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 210 ? ? O A HOH 255 ? ? 1.86 2 1 O A HOH 229 ? ? O A HOH 234 ? ? 1.88 3 1 O A HOH 237 ? ? O A HOH 257 ? ? 1.95 4 1 O A HOH 203 ? ? O A HOH 230 ? ? 2.03 5 1 O A HOH 230 ? ? O A HOH 255 ? ? 2.19 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 21 ? ? -158.15 88.02 2 1 TYR A 29 ? ? -91.46 -77.37 3 1 HIS A 51 ? ? -130.99 -62.66 4 1 THR A 76 ? ? 84.47 -38.74 5 1 ARG A 97 ? ? -96.58 42.29 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A SER 179 ? CA ? A SER 179 CA 2 1 Y 1 A SER 179 ? C ? A SER 179 C 3 1 Y 1 A SER 179 ? O ? A SER 179 O 4 1 Y 1 A SER 179 ? CB ? A SER 179 CB 5 1 Y 1 A SER 179 ? OG ? A SER 179 OG # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A HIS 2 ? A HIS 2 3 1 Y 1 A ASN 3 ? A ASN 3 4 1 Y 1 A ASN 4 ? A ASN 4 5 1 Y 1 A GLU 5 ? A GLU 5 6 1 Y 1 A ASN 6 ? A ASN 6 7 1 Y 1 A SER 180 ? A SER 180 8 1 Y 1 A HIS 181 ? A HIS 181 9 1 Y 1 A LEU 182 ? A LEU 182 10 1 Y 1 A ASN 183 ? A ASN 183 11 1 Y 1 A PRO 184 ? A PRO 184 12 1 Y 1 A LEU 185 ? A LEU 185 13 1 Y 1 A PRO 186 ? A PRO 186 14 1 Y 1 A PRO 187 ? A PRO 187 15 1 Y 1 A GLU 188 ? A GLU 188 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #