data_1BDC # _entry.id 1BDC # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.355 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1BDC pdb_00001bdc 10.2210/pdb1bdc/pdb WWPDB D_1000171618 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1BDD _pdbx_database_related.details . _pdbx_database_related.content_type 'representative structure' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1BDC _pdbx_database_status.recvd_initial_deposition_date 1996-06-28 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Gouda, H.' 1 'Torigoe, H.' 2 'Saito, A.' 3 'Sato, M.' 4 'Arata, Y.' 5 'Shimada, I.' 6 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary ;Three-dimensional solution structure of the B domain of staphylococcal protein A: comparisons of the solution and crystal structures. ; Biochemistry 31 9665 9672 1992 BICHAW US 0006-2960 0033 ? 1390743 10.1021/bi00155a020 1 ;15N Nuclear Magnetic Resonance Studies of the B Domain of Staphylococcal Protein A: Sequence Specific Assignments of the Imide 15N Resonances of the Proline Residues and the Interaction with Human Immunoglobulin G ; 'FEBS Lett.' 269 174 ? 1990 FEBLAL NE 0014-5793 0165 ? ? ? 2 ;Sequential 1H NMR Assignments and Secondary Structure of the B Domain of Staphylococcal Protein A: Structural Changes between the Free B Domain in Solution and the Fc-Bound B Domain in Crystal ; Biochemistry 29 8787 ? 1990 BICHAW US 0006-2960 0033 ? ? ? 3 'High Level Expression of a Synthetic Gene Coding for Igg-Binding Domain B of Staphylococcal Protein A' 'Protein Eng.' 2 481 ? 1989 PRENE9 UK 0269-2139 0859 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Gouda, H.' 1 ? primary 'Torigoe, H.' 2 ? primary 'Saito, A.' 3 ? primary 'Sato, M.' 4 ? primary 'Arata, Y.' 5 ? primary 'Shimada, I.' 6 ? 1 'Torigoe, H.' 7 ? 1 'Shimada, I.' 8 ? 1 'Waelchli, M.' 9 ? 1 'Saito, A.' 10 ? 1 'Sato, M.' 11 ? 1 'Arata, Y.' 12 ? 2 'Torigoe, H.' 13 ? 2 'Shimada, I.' 14 ? 2 'Saito, A.' 15 ? 2 'Sato, M.' 16 ? 2 'Arata, Y.' 17 ? 3 'Saito, A.' 18 ? 3 'Honda, S.' 19 ? 3 'Nishi, T.' 20 ? 3 'Koike, M.' 21 ? 3 'Okazaki, K.' 22 ? 3 'Itoh, S.' 23 ? 3 'Sato, M.' 24 ? # _cell.entry_id 1BDC _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1BDC _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'STAPHYLOCOCCUS AUREUS PROTEIN A' _entity.formula_weight 6778.418 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'B DOMAIN' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code TADNKFNKEQQNAFYEILHLPNLNEEQRNGFIQSLKDDPSQSANLLAEAKKLNDAQAPKA _entity_poly.pdbx_seq_one_letter_code_can TADNKFNKEQQNAFYEILHLPNLNEEQRNGFIQSLKDDPSQSANLLAEAKKLNDAQAPKA _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 THR n 1 2 ALA n 1 3 ASP n 1 4 ASN n 1 5 LYS n 1 6 PHE n 1 7 ASN n 1 8 LYS n 1 9 GLU n 1 10 GLN n 1 11 GLN n 1 12 ASN n 1 13 ALA n 1 14 PHE n 1 15 TYR n 1 16 GLU n 1 17 ILE n 1 18 LEU n 1 19 HIS n 1 20 LEU n 1 21 PRO n 1 22 ASN n 1 23 LEU n 1 24 ASN n 1 25 GLU n 1 26 GLU n 1 27 GLN n 1 28 ARG n 1 29 ASN n 1 30 GLY n 1 31 PHE n 1 32 ILE n 1 33 GLN n 1 34 SER n 1 35 LEU n 1 36 LYS n 1 37 ASP n 1 38 ASP n 1 39 PRO n 1 40 SER n 1 41 GLN n 1 42 SER n 1 43 ALA n 1 44 ASN n 1 45 LEU n 1 46 LEU n 1 47 ALA n 1 48 GLU n 1 49 ALA n 1 50 LYS n 1 51 LYS n 1 52 LEU n 1 53 ASN n 1 54 ASP n 1 55 ALA n 1 56 GLN n 1 57 ALA n 1 58 PRO n 1 59 LYS n 1 60 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Staphylococcus _entity_src_gen.pdbx_gene_src_gene 'SYNTHETIC GENE' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Staphylococcus aureus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1280 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PPRAFW1 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code SPA2_STAAU _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P38507 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ;MKKKNIYSIRKLGVGIASVTLGTLLISGGVTPAANAAQHDEAQQNAFYQVLNMPNLNADQRNGFIQSLKDDPSQSANVLG EAQKLNDSQAPKADAQQNKFNKDQQSAFYEILNMPNLNEEQRNGFIQSLKDDPSQSTNVLGEAKKLNESQAPKADNNFNK EQQNAFYEILNMPNLNEEQRNGFIQSLKDDPSQSANLLAEAKKLNESQAPKADNKFNKEQQNAFYEILHLPNLNEEQRNG FIQSLKDDPSQSANLLAEAKKLNDAQAPKADNKFNKEQQNAFYEILHLPNLTEEQRNGFIQSLKDDPSVSKEILAEAKKL NDAQAPKEEDNNKPGKEDGNKPGKEDGNKPGKEDNKKPGKEDGNKPGKEDNKKPGKEDGNKPGKEDGNKPGKEDGNKPGK EDGNKPGKEDGNGVHVVKPGDTVNDIAKANGTTADKIAADNKLADKNMIKPGQELVVDKKQPANHADANKAQALPETGEE NPFIGTTVFGGLSLALGAALLAGRRREL ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1BDC _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 60 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P38507 _struct_ref_seq.db_align_beg 212 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 270 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 60 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 DQF-COSY 1 2 1 HOHAHA 1 3 1 NOESY 1 4 1 'PE-COSY; 1H-15N HSQC' 1 5 1 DOUBLE-DEPT 1 6 1 2D-HMQC-HOHAHA 1 7 1 2D-HMQC-NOESY 1 8 1 HMQC-J 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 303 _pdbx_nmr_exptl_sample_conditions.pressure ? _pdbx_nmr_exptl_sample_conditions.pH 5.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model JNM-GSX _pdbx_nmr_spectrometer.manufacturer JEOL _pdbx_nmr_spectrometer.field_strength 500 # _pdbx_nmr_refine.entry_id 1BDC _pdbx_nmr_refine.method 'HYBRID DISTANCE GEOMETRY-DYNAMICAL SIMULATED ANNEALING METHOD' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 1BDC _pdbx_nmr_ensemble.conformers_calculated_total_number 55 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.conformer_selection_criteria ;AT FIRST, THE DEPOSITORS CARRIED OUT THE DISTANCE GEOMETRY CALCULATION BY STARTING FROM 55 INITIAL STRUCTURES. THIS CALCULATION RESULTED IN 41 SOLUTIONS, WHICH HAD CORRECT POLYPEPTIDE FOLDS EXCLUDING 14 MIRROR-IMAGE SUBSTRUCTURES. NEXT, THE DYNAMICAL SIMULATED ANNEALING CALCULATIONS WERE PERFORMED BY USING THESE 41 SUBSTRUCTURES. THE DISTANCE AND TORSION ANGLE VIOLATIONS OF THE 41 SOLUTIONS OBTAINED BY THE DYNAMICAL SIMULATED ANNEALING CALCULATIONS WERE SMALLER THAN 0.6 ANGSTROMS AND 27 DEGREES, RESPECTIVELY. THE DEPOSITORS SELECTED 10 SOLUTIONS THAT HAD THE DISTANCE AND TORSION ANGLE VIOLATIONS OF SMALLER THAN 0.5 ANGSTROMS AND 10 DEGREES, RESPECTIVELY. ; # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal refinement X-PLOR ? BRUNGER 1 'structure solution' EMBOSS ? ? 2 'structure solution' X-PLOR ? ? 3 # _exptl.entry_id 1BDC _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 1BDC _struct.title 'STAPHYLOCOCCUS AUREUS PROTEIN A, IMMUNOGLOBULIN-BINDING B DOMAIN, NMR, 10 STRUCTURES' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1BDC _struct_keywords.pdbx_keywords 'IMMUNOGLOBULIN-BINDING PROTEIN' _struct_keywords.text 'IMMUNOGLOBULIN-BINDING PROTEIN, TRANSMEMBRANE, CELL WALL, IMMUNOGLOBULIN BINDING DOMAIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag Y _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLN A 10 ? HIS A 19 ? GLN A 10 HIS A 19 1 ? 10 HELX_P HELX_P2 2 GLU A 25 ? ASP A 37 ? GLU A 25 ASP A 37 1 ? 13 HELX_P HELX_P3 3 SER A 42 ? ALA A 55 ? SER A 42 ALA A 55 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _database_PDB_matrix.entry_id 1BDC _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1BDC _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 THR 1 1 1 THR THR A . n A 1 2 ALA 2 2 2 ALA ALA A . n A 1 3 ASP 3 3 3 ASP ASP A . n A 1 4 ASN 4 4 4 ASN ASN A . n A 1 5 LYS 5 5 5 LYS LYS A . n A 1 6 PHE 6 6 6 PHE PHE A . n A 1 7 ASN 7 7 7 ASN ASN A . n A 1 8 LYS 8 8 8 LYS LYS A . n A 1 9 GLU 9 9 9 GLU GLU A . n A 1 10 GLN 10 10 10 GLN GLN A . n A 1 11 GLN 11 11 11 GLN GLN A . n A 1 12 ASN 12 12 12 ASN ASN A . n A 1 13 ALA 13 13 13 ALA ALA A . n A 1 14 PHE 14 14 14 PHE PHE A . n A 1 15 TYR 15 15 15 TYR TYR A . n A 1 16 GLU 16 16 16 GLU GLU A . n A 1 17 ILE 17 17 17 ILE ILE A . n A 1 18 LEU 18 18 18 LEU LEU A . n A 1 19 HIS 19 19 19 HIS HIS A . n A 1 20 LEU 20 20 20 LEU LEU A . n A 1 21 PRO 21 21 21 PRO PRO A . n A 1 22 ASN 22 22 22 ASN ASN A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 ASN 24 24 24 ASN ASN A . n A 1 25 GLU 25 25 25 GLU GLU A . n A 1 26 GLU 26 26 26 GLU GLU A . n A 1 27 GLN 27 27 27 GLN GLN A . n A 1 28 ARG 28 28 28 ARG ARG A . n A 1 29 ASN 29 29 29 ASN ASN A . n A 1 30 GLY 30 30 30 GLY GLY A . n A 1 31 PHE 31 31 31 PHE PHE A . n A 1 32 ILE 32 32 32 ILE ILE A . n A 1 33 GLN 33 33 33 GLN GLN A . n A 1 34 SER 34 34 34 SER SER A . n A 1 35 LEU 35 35 35 LEU LEU A . n A 1 36 LYS 36 36 36 LYS LYS A . n A 1 37 ASP 37 37 37 ASP ASP A . n A 1 38 ASP 38 38 38 ASP ASP A . n A 1 39 PRO 39 39 39 PRO PRO A . n A 1 40 SER 40 40 40 SER SER A . n A 1 41 GLN 41 41 41 GLN GLN A . n A 1 42 SER 42 42 42 SER SER A . n A 1 43 ALA 43 43 43 ALA ALA A . n A 1 44 ASN 44 44 44 ASN ASN A . n A 1 45 LEU 45 45 45 LEU LEU A . n A 1 46 LEU 46 46 46 LEU LEU A . n A 1 47 ALA 47 47 47 ALA ALA A . n A 1 48 GLU 48 48 48 GLU GLU A . n A 1 49 ALA 49 49 49 ALA ALA A . n A 1 50 LYS 50 50 50 LYS LYS A . n A 1 51 LYS 51 51 51 LYS LYS A . n A 1 52 LEU 52 52 52 LEU LEU A . n A 1 53 ASN 53 53 53 ASN ASN A . n A 1 54 ASP 54 54 54 ASP ASP A . n A 1 55 ALA 55 55 55 ALA ALA A . n A 1 56 GLN 56 56 56 GLN GLN A . n A 1 57 ALA 57 57 57 ALA ALA A . n A 1 58 PRO 58 58 58 PRO PRO A . n A 1 59 LYS 59 59 59 LYS LYS A . n A 1 60 ALA 60 60 60 ALA ALA A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1997-01-11 2 'Structure model' 1 1 2008-03-24 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-02-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' 5 4 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_database_status 3 4 'Structure model' pdbx_struct_assembly 4 4 'Structure model' pdbx_struct_oper_list # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_database_status.process_site' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR 'model building' . ? 1 X-PLOR refinement . ? 2 X-PLOR phasing . ? 3 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 HD21 A ASN 12 ? ? H A ALA 13 ? ? 1.18 2 4 HD21 A ASN 7 ? ? H A LYS 8 ? ? 1.12 3 4 HD21 A ASN 12 ? ? H A ALA 13 ? ? 1.33 4 5 HG A SER 42 ? ? H A ALA 43 ? ? 1.31 5 6 HD21 A ASN 7 ? ? H A LYS 8 ? ? 1.12 6 10 HD21 A ASN 7 ? ? H A LYS 8 ? ? 1.24 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CG A HIS 19 ? ? ND1 A HIS 19 ? ? 1.242 1.369 -0.127 0.015 N 2 2 CG A HIS 19 ? ? ND1 A HIS 19 ? ? 1.245 1.369 -0.124 0.015 N 3 3 CG A HIS 19 ? ? ND1 A HIS 19 ? ? 1.244 1.369 -0.125 0.015 N 4 4 CG A HIS 19 ? ? ND1 A HIS 19 ? ? 1.244 1.369 -0.125 0.015 N 5 5 CG A HIS 19 ? ? ND1 A HIS 19 ? ? 1.244 1.369 -0.125 0.015 N 6 6 CG A HIS 19 ? ? ND1 A HIS 19 ? ? 1.244 1.369 -0.125 0.015 N 7 7 CG A HIS 19 ? ? ND1 A HIS 19 ? ? 1.239 1.369 -0.130 0.015 N 8 8 CG A HIS 19 ? ? ND1 A HIS 19 ? ? 1.238 1.369 -0.131 0.015 N 9 9 CG A HIS 19 ? ? ND1 A HIS 19 ? ? 1.244 1.369 -0.125 0.015 N 10 10 CG A HIS 19 ? ? ND1 A HIS 19 ? ? 1.242 1.369 -0.127 0.015 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 2 ? ? -161.18 -18.16 2 1 ASP A 3 ? ? -108.14 -70.93 3 1 ASN A 4 ? ? -72.79 -161.22 4 1 ASN A 7 ? ? -152.79 -36.37 5 1 LYS A 8 ? ? -53.07 80.04 6 1 GLU A 9 ? ? 42.96 29.05 7 1 GLN A 10 ? ? -91.89 -73.22 8 1 LEU A 18 ? ? -82.95 35.61 9 1 LEU A 20 ? ? -42.90 101.71 10 1 ASP A 38 ? ? -153.06 83.85 11 1 PRO A 39 ? ? -65.69 32.55 12 1 SER A 40 ? ? -90.37 -80.24 13 1 ALA A 55 ? ? -52.83 -6.37 14 2 LYS A 5 ? ? -163.65 61.45 15 2 ASN A 7 ? ? -147.46 -38.41 16 2 LYS A 8 ? ? -55.49 78.20 17 2 GLN A 10 ? ? -93.89 -75.72 18 2 TYR A 15 ? ? -58.75 -4.83 19 2 LEU A 18 ? ? -72.71 28.42 20 2 HIS A 19 ? ? -142.96 -20.95 21 2 LEU A 20 ? ? -37.26 94.29 22 2 ASN A 29 ? ? -39.53 -27.07 23 2 ASP A 38 ? ? -159.57 73.32 24 2 PRO A 39 ? ? -68.64 29.00 25 2 SER A 40 ? ? -93.61 -61.92 26 2 ALA A 43 ? ? -39.05 -39.27 27 2 ASN A 53 ? ? -78.66 -71.89 28 2 ALA A 55 ? ? -66.09 2.49 29 2 GLN A 56 ? ? -137.01 -51.94 30 2 LYS A 59 ? ? -142.17 53.14 31 3 ASP A 3 ? ? 66.68 -25.75 32 3 ASN A 4 ? ? 40.45 86.91 33 3 ASN A 7 ? ? -155.93 -37.64 34 3 LYS A 8 ? ? -56.43 79.31 35 3 GLU A 9 ? ? 36.20 24.87 36 3 ILE A 17 ? ? -39.95 -27.02 37 3 LEU A 18 ? ? -73.54 25.06 38 3 LEU A 20 ? ? -36.14 92.41 39 3 ASP A 38 ? ? -161.80 71.73 40 3 SER A 40 ? ? -52.75 0.71 41 3 SER A 42 ? ? -35.33 -71.17 42 3 ALA A 55 ? ? -67.81 9.87 43 3 GLN A 56 ? ? -153.96 -41.69 44 3 ALA A 57 ? ? -46.27 165.97 45 3 LYS A 59 ? ? -86.28 34.37 46 4 LYS A 5 ? ? 53.05 172.17 47 4 PHE A 6 ? ? 36.32 103.81 48 4 ASN A 7 ? ? -149.56 -28.75 49 4 LYS A 8 ? ? -38.55 160.57 50 4 GLU A 9 ? ? -63.44 15.08 51 4 LEU A 18 ? ? -84.34 37.70 52 4 HIS A 19 ? ? -146.38 -27.58 53 4 LEU A 20 ? ? -38.70 97.33 54 4 ASP A 38 ? ? -159.79 74.24 55 4 PRO A 39 ? ? -67.58 23.86 56 4 PRO A 58 ? ? -61.95 -170.57 57 5 ALA A 2 ? ? -106.93 -80.79 58 5 ASN A 4 ? ? -171.93 10.38 59 5 LYS A 5 ? ? 54.87 113.36 60 5 PHE A 6 ? ? 158.72 78.66 61 5 ASN A 7 ? ? -142.43 -20.46 62 5 GLU A 9 ? ? 178.98 24.35 63 5 LEU A 18 ? ? -84.49 38.07 64 5 HIS A 19 ? ? -147.36 -4.62 65 5 LEU A 20 ? ? -46.25 106.95 66 5 ASP A 38 ? ? -152.64 75.26 67 5 PRO A 39 ? ? -66.65 25.73 68 5 GLN A 41 ? ? -149.18 15.54 69 5 PRO A 58 ? ? -60.55 -175.44 70 6 ALA A 2 ? ? 59.73 116.27 71 6 ASP A 3 ? ? -144.29 -112.25 72 6 ASN A 4 ? ? -88.46 46.86 73 6 LYS A 5 ? ? -109.37 53.11 74 6 ASN A 7 ? ? -161.07 -39.30 75 6 LYS A 8 ? ? -41.19 81.97 76 6 GLU A 9 ? ? 38.83 24.91 77 6 GLN A 10 ? ? -91.61 -89.62 78 6 LEU A 18 ? ? -87.29 32.96 79 6 HIS A 19 ? ? -149.75 13.80 80 6 GLU A 26 ? ? -78.26 -71.71 81 6 ASP A 38 ? ? -161.02 78.64 82 6 PRO A 39 ? ? -71.91 38.67 83 6 GLN A 41 ? ? -109.02 46.28 84 6 ALA A 43 ? ? -38.88 -24.55 85 6 GLN A 56 ? ? -138.94 -59.02 86 6 ALA A 57 ? ? -41.15 163.80 87 6 LYS A 59 ? ? -131.45 -148.62 88 7 ASP A 3 ? ? -61.02 -158.78 89 7 LYS A 5 ? ? -46.47 150.08 90 7 ASN A 7 ? ? -160.86 -34.65 91 7 GLU A 9 ? ? -176.99 29.97 92 7 LEU A 18 ? ? -77.34 38.79 93 7 LEU A 20 ? ? -35.86 92.16 94 7 SER A 40 ? ? -51.09 -0.49 95 7 ALA A 43 ? ? -39.60 -34.92 96 7 GLN A 56 ? ? -132.23 -50.80 97 7 PRO A 58 ? ? -61.40 -172.70 98 8 ASN A 7 ? ? -160.29 -34.42 99 8 LYS A 8 ? ? -53.60 75.36 100 8 GLN A 10 ? ? -94.58 -86.86 101 8 LEU A 18 ? ? -89.74 35.60 102 8 LEU A 20 ? ? -38.06 96.49 103 8 PRO A 39 ? ? -59.51 81.82 104 8 SER A 40 ? ? -80.62 -86.40 105 8 GLN A 41 ? ? -148.98 55.76 106 8 ALA A 55 ? ? -64.76 6.01 107 8 GLN A 56 ? ? -147.63 -55.90 108 8 ALA A 57 ? ? -38.57 102.90 109 9 PHE A 6 ? ? -176.17 122.34 110 9 ASN A 7 ? ? -157.47 -40.73 111 9 LYS A 8 ? ? -48.34 89.85 112 9 GLU A 9 ? ? 36.92 26.15 113 9 GLN A 10 ? ? -92.77 -67.96 114 9 LEU A 18 ? ? -65.98 15.67 115 9 HIS A 19 ? ? -143.70 35.62 116 9 ASN A 29 ? ? -39.66 -29.35 117 9 GLN A 33 ? ? -39.40 -37.51 118 9 PRO A 39 ? ? -67.00 25.68 119 9 GLN A 41 ? ? -160.24 21.96 120 9 ALA A 43 ? ? -39.55 -33.11 121 9 GLN A 56 ? ? -147.46 10.32 122 10 ASP A 3 ? ? -96.64 43.01 123 10 ASN A 7 ? ? -162.79 -36.92 124 10 LYS A 8 ? ? -53.68 72.09 125 10 GLU A 9 ? ? 35.51 25.89 126 10 LEU A 18 ? ? -90.30 39.98 127 10 HIS A 19 ? ? -140.69 -20.57 128 10 LEU A 20 ? ? -38.16 98.30 129 10 PRO A 39 ? ? -71.64 33.11 130 10 GLN A 41 ? ? -144.97 46.94 131 10 LYS A 50 ? ? -39.71 -25.01 132 10 PRO A 58 ? ? -62.01 -173.45 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 ARG A 28 ? ? 0.288 'SIDE CHAIN' 2 2 ARG A 28 ? ? 0.201 'SIDE CHAIN' 3 3 ARG A 28 ? ? 0.231 'SIDE CHAIN' 4 4 ARG A 28 ? ? 0.172 'SIDE CHAIN' 5 5 ARG A 28 ? ? 0.232 'SIDE CHAIN' 6 6 ARG A 28 ? ? 0.127 'SIDE CHAIN' 7 6 PHE A 31 ? ? 0.074 'SIDE CHAIN' 8 8 ARG A 28 ? ? 0.314 'SIDE CHAIN' 9 9 ARG A 28 ? ? 0.315 'SIDE CHAIN' 10 10 ARG A 28 ? ? 0.204 'SIDE CHAIN' #