data_1D1I # _entry.id 1D1I # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.351 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1D1I pdb_00001d1i 10.2210/pdb1d1i/pdb RCSB RCSB009707 ? ? WWPDB D_1000009707 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1bos _pdbx_database_related.details '1bos conains the wild type protein in complexed with the same trisaccharide.' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1D1I _pdbx_database_status.recvd_initial_deposition_date 1999-09-17 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Ling, H.' 1 'Boodhoo, A.' 2 'Brunton, J.L.' 3 'Read, R.J.' 4 # _citation.id primary _citation.title 'Mutated Shiga-like Toxin B Subunit (W34A) Complexed with Receptor Gb3 Analogue' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ling, H.' 1 ? primary 'Boodhoo, A.' 2 ? primary 'Brunton, J.L.' 3 ? primary 'Read, R.J.' 4 ? # _cell.entry_id 1D1I _cell.length_a 44.232 _cell.length_b 44.136 _cell.length_c 53.881 _cell.angle_alpha 106.04 _cell.angle_beta 106.37 _cell.angle_gamma 99.22 _cell.Z_PDB 5 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1D1I _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'SHIGA TOXIN B-CHAIN' 7583.501 5 ? W34A 'SHIGA TOXIN I BINDING DOMAIN' ? 2 branched man 'alpha-D-galactopyranose-(1-4)-beta-D-galactopyranose' 342.297 1 ? ? ? ? 3 branched man 'alpha-D-galactopyranose-(1-4)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose' 504.438 5 ? ? ? ? 4 water nat water 18.015 196 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code TPDCVTGKVEYTKYNDDDTFTVKVGDKELFTNRANLQSLLLSAQITGMTVTIKTNACHNGGGFSEVIFR _entity_poly.pdbx_seq_one_letter_code_can TPDCVTGKVEYTKYNDDDTFTVKVGDKELFTNRANLQSLLLSAQITGMTVTIKTNACHNGGGFSEVIFR _entity_poly.pdbx_strand_id A,B,C,D,E _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 THR n 1 2 PRO n 1 3 ASP n 1 4 CYS n 1 5 VAL n 1 6 THR n 1 7 GLY n 1 8 LYS n 1 9 VAL n 1 10 GLU n 1 11 TYR n 1 12 THR n 1 13 LYS n 1 14 TYR n 1 15 ASN n 1 16 ASP n 1 17 ASP n 1 18 ASP n 1 19 THR n 1 20 PHE n 1 21 THR n 1 22 VAL n 1 23 LYS n 1 24 VAL n 1 25 GLY n 1 26 ASP n 1 27 LYS n 1 28 GLU n 1 29 LEU n 1 30 PHE n 1 31 THR n 1 32 ASN n 1 33 ARG n 1 34 ALA n 1 35 ASN n 1 36 LEU n 1 37 GLN n 1 38 SER n 1 39 LEU n 1 40 LEU n 1 41 LEU n 1 42 SER n 1 43 ALA n 1 44 GLN n 1 45 ILE n 1 46 THR n 1 47 GLY n 1 48 MET n 1 49 THR n 1 50 VAL n 1 51 THR n 1 52 ILE n 1 53 LYS n 1 54 THR n 1 55 ASN n 1 56 ALA n 1 57 CYS n 1 58 HIS n 1 59 ASN n 1 60 GLY n 1 61 GLY n 1 62 GLY n 1 63 PHE n 1 64 SER n 1 65 GLU n 1 66 VAL n 1 67 ILE n 1 68 PHE n 1 69 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Escherichia _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 562 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details PLASMID _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code SLTB_BPH30 _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P08027 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1D1I A 1 ? 69 ? P08027 21 ? 89 ? 101 169 2 1 1D1I B 1 ? 69 ? P08027 21 ? 89 ? 201 269 3 1 1D1I C 1 ? 69 ? P08027 21 ? 89 ? 301 369 4 1 1D1I D 1 ? 69 ? P08027 21 ? 89 ? 401 469 5 1 1D1I E 1 ? 69 ? P08027 21 ? 89 ? 501 569 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1D1I ALA A 34 ? UNP P08027 TRP 54 'engineered mutation' 134 1 2 1D1I ALA B 34 ? UNP P08027 TRP 54 'engineered mutation' 234 2 3 1D1I ALA C 34 ? UNP P08027 TRP 54 'engineered mutation' 334 3 4 1D1I ALA D 34 ? UNP P08027 TRP 54 'engineered mutation' 434 4 5 1D1I ALA E 34 ? UNP P08027 TRP 54 'engineered mutation' 534 5 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BGC 'D-saccharide, beta linking' . beta-D-glucopyranose 'beta-D-glucose; D-glucose; glucose' 'C6 H12 O6' 180.156 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GAL 'D-saccharide, beta linking' . beta-D-galactopyranose 'beta-D-galactose; D-galactose; galactose' 'C6 H12 O6' 180.156 GLA 'D-saccharide, alpha linking' . alpha-D-galactopyranose 'alpha-D-galactose; D-galactose; galactose; ALPHA D-GALACTOSE' 'C6 H12 O6' 180.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1D1I _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.47 _exptl_crystal.density_percent_sol 50.22 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details '10% (NH4)2SO4, 5% propanol, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 298.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type MACSCIENCE _diffrn_detector.pdbx_collection_date 1997-02-20 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU200' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1D1I _reflns.observed_criterion_sigma_I 0.00 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 19.7 _reflns.d_resolution_high 1.70 _reflns.number_obs 36339 _reflns.number_all 39890 _reflns.percent_possible_obs 91.1 _reflns.pdbx_Rmerge_I_obs 0.081 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 13.9 _reflns.B_iso_Wilson_estimate 15.6 _reflns.pdbx_redundancy 2.2 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.70 _reflns_shell.d_res_low 1.73 _reflns_shell.percent_possible_all 61.6 _reflns_shell.Rmerge_I_obs 0.362 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 1.36 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1199 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1D1I _refine.ls_number_reflns_obs 36339 _refine.ls_number_reflns_all 39890 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_d_res_low 19.7 _refine.ls_d_res_high 1.70 _refine.ls_percent_reflns_obs 91.1 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.191 _refine.ls_R_factor_R_free 0.211 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 3.0 _refine.ls_number_reflns_R_free 1101 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 19.08 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ;maximum likelihood F target, with NCS restraints, bulk solvent correction ; _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details 'thin shells through whole resolution range' _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2655 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 193 _refine_hist.number_atoms_solvent 196 _refine_hist.number_atoms_total 3044 _refine_hist.d_res_high 1.70 _refine_hist.d_res_low 19.7 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_angle_deg 1.6 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d 0.014 ? ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 1D1I _struct.title 'MUTATED SHIGA-LIKE TOXIN B SUBUNIT (W34A) COMPLEXED WITH RECEPTOR GB3 ANALOGUE' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1D1I _struct_keywords.pdbx_keywords TOXIN _struct_keywords.text 'TOXIN, RECEPTOR BINDING, PROTEIN-CARBOHYDRATE RECOGNITION, OB-FOLD' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 1 ? F N N 2 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 3 ? K N N 3 ? L N N 4 ? M N N 4 ? N N N 4 ? O N N 4 ? P N N 4 ? # _struct_biol.id 1 _struct_biol.details 'homopentamer, active as a pentamer' _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 34 ? THR A 46 ? ALA A 134 THR A 146 1 ? 13 HELX_P HELX_P2 2 ALA B 34 ? THR B 46 ? ALA B 234 THR B 246 5 ? 13 HELX_P HELX_P3 3 ALA C 34 ? THR C 46 ? ALA C 334 THR C 346 5 ? 13 HELX_P HELX_P4 4 ALA D 34 ? THR D 46 ? ALA D 434 THR D 446 5 ? 13 HELX_P HELX_P5 5 ALA E 34 ? THR E 46 ? ALA E 534 THR E 546 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 4 SG ? ? ? 1_555 A CYS 57 SG ? ? A CYS 104 A CYS 157 1_555 ? ? ? ? ? ? ? 2.062 ? ? disulf2 disulf ? ? B CYS 4 SG ? ? ? 1_555 B CYS 57 SG ? ? B CYS 204 B CYS 257 1_555 ? ? ? ? ? ? ? 2.039 ? ? disulf3 disulf ? ? C CYS 4 SG ? ? ? 1_555 C CYS 57 SG ? ? C CYS 304 C CYS 357 1_555 ? ? ? ? ? ? ? 2.056 ? ? disulf4 disulf ? ? D CYS 4 SG ? ? ? 1_555 D CYS 57 SG ? ? D CYS 404 D CYS 457 1_555 ? ? ? ? ? ? ? 2.043 ? ? disulf5 disulf ? ? E CYS 4 SG ? ? ? 1_555 E CYS 57 SG ? ? E CYS 504 E CYS 557 1_555 ? ? ? ? ? ? ? 2.065 ? ? covale1 covale both ? F GAL . O4 ? ? ? 1_555 F GLA . C1 ? ? F GAL 1 F GLA 2 1_555 ? ? ? ? ? ? ? 1.408 ? ? covale2 covale both ? G BGC . O4 ? ? ? 1_555 G GAL . C1 ? ? G BGC 1 G GAL 2 1_555 ? ? ? ? ? ? ? 1.391 ? ? covale3 covale both ? G GAL . O4 ? ? ? 1_555 G GLA . C1 ? ? G GAL 2 G GLA 3 1_555 ? ? ? ? ? ? ? 1.409 ? ? covale4 covale both ? H BGC . O4 ? ? ? 1_555 H GAL . C1 ? ? H BGC 1 H GAL 2 1_555 ? ? ? ? ? ? ? 1.387 ? ? covale5 covale both ? H GAL . O4 ? ? ? 1_555 H GLA . C1 ? ? H GAL 2 H GLA 3 1_555 ? ? ? ? ? ? ? 1.407 ? ? covale6 covale both ? I BGC . O4 ? ? ? 1_555 I GAL . C1 ? ? I BGC 1 I GAL 2 1_555 ? ? ? ? ? ? ? 1.397 ? ? covale7 covale both ? I GAL . O4 ? ? ? 1_555 I GLA . C1 ? ? I GAL 2 I GLA 3 1_555 ? ? ? ? ? ? ? 1.414 ? ? covale8 covale both ? J BGC . O4 ? ? ? 1_555 J GAL . C1 ? ? J BGC 1 J GAL 2 1_555 ? ? ? ? ? ? ? 1.391 ? ? covale9 covale both ? J GAL . O4 ? ? ? 1_555 J GLA . C1 ? ? J GAL 2 J GLA 3 1_555 ? ? ? ? ? ? ? 1.411 ? ? covale10 covale both ? K BGC . O4 ? ? ? 1_555 K GAL . C1 ? ? K BGC 1 K GAL 2 1_555 ? ? ? ? ? ? ? 1.399 ? ? covale11 covale both ? K GAL . O4 ? ? ? 1_555 K GLA . C1 ? ? K GAL 2 K GLA 3 1_555 ? ? ? ? ? ? ? 1.413 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 3 ? C ? 3 ? D ? 3 ? E ? 3 ? F ? 3 ? G ? 3 ? H ? 3 ? I ? 3 ? J ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel G 1 2 ? anti-parallel G 2 3 ? anti-parallel H 1 2 ? anti-parallel H 2 3 ? anti-parallel I 1 2 ? anti-parallel I 2 3 ? anti-parallel J 1 2 ? anti-parallel J 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 27 ? THR A 31 ? LYS A 127 THR A 131 A 2 PHE A 20 ? VAL A 24 ? PHE A 120 VAL A 124 A 3 VAL A 9 ? TYR A 14 ? VAL A 109 TYR A 114 B 1 GLU A 65 ? ARG A 69 ? GLU A 165 ARG A 169 B 2 THR A 49 ? LYS A 53 ? THR A 149 LYS A 153 B 3 ASP A 3 ? LYS A 8 ? ASP A 103 LYS A 108 C 1 LYS B 27 ? THR B 31 ? LYS B 227 THR B 231 C 2 PHE B 20 ? VAL B 24 ? PHE B 220 VAL B 224 C 3 VAL B 9 ? TYR B 14 ? VAL B 209 TYR B 214 D 1 GLU B 65 ? ARG B 69 ? GLU B 265 ARG B 269 D 2 THR B 49 ? LYS B 53 ? THR B 249 LYS B 253 D 3 ASP B 3 ? LYS B 8 ? ASP B 203 LYS B 208 E 1 TYR C 11 ? TYR C 14 ? TYR C 311 TYR C 314 E 2 PHE C 20 ? VAL C 24 ? PHE C 320 VAL C 324 E 3 LYS C 27 ? THR C 31 ? LYS C 327 THR C 331 F 1 GLU C 65 ? ARG C 69 ? GLU C 365 ARG C 369 F 2 THR C 49 ? LYS C 53 ? THR C 349 LYS C 353 F 3 ASP C 3 ? LYS C 8 ? ASP C 303 LYS C 308 G 1 LYS D 27 ? THR D 31 ? LYS D 427 THR D 431 G 2 PHE D 20 ? VAL D 24 ? PHE D 420 VAL D 424 G 3 VAL D 9 ? TYR D 14 ? VAL D 409 TYR D 414 H 1 GLU D 65 ? ARG D 69 ? GLU D 465 ARG D 469 H 2 THR D 49 ? LYS D 53 ? THR D 449 LYS D 453 H 3 ASP D 3 ? LYS D 8 ? ASP D 403 LYS D 408 I 1 LYS E 27 ? THR E 31 ? LYS E 527 THR E 531 I 2 PHE E 20 ? VAL E 24 ? PHE E 520 VAL E 524 I 3 VAL E 9 ? TYR E 14 ? VAL E 509 TYR E 514 J 1 GLU E 65 ? ARG E 69 ? GLU E 565 ARG E 569 J 2 THR E 49 ? LYS E 53 ? THR E 549 LYS E 553 J 3 ASP E 3 ? LYS E 8 ? ASP E 503 LYS E 508 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O LYS A 27 ? O LYS A 127 N VAL A 24 ? N VAL A 124 A 2 3 O THR A 21 ? O THR A 121 N LYS A 13 ? N LYS A 113 B 1 2 O GLU A 65 ? O GLU A 165 N LYS A 53 ? N LYS A 153 B 2 3 O VAL A 50 ? O VAL A 150 N GLY A 7 ? N GLY A 107 C 1 2 O LYS B 27 ? O LYS B 227 N VAL B 24 ? N VAL B 224 C 2 3 O THR B 21 ? O THR B 221 N LYS B 13 ? N LYS B 213 D 1 2 O GLU B 65 ? O GLU B 265 N LYS B 53 ? N LYS B 253 D 2 3 O VAL B 50 ? O VAL B 250 N GLY B 7 ? N GLY B 207 E 1 2 O TYR C 11 ? O TYR C 311 N LYS C 23 ? N LYS C 323 E 2 3 O PHE C 20 ? O PHE C 320 N THR C 31 ? N THR C 331 F 1 2 O GLU C 65 ? O GLU C 365 N LYS C 53 ? N LYS C 353 F 2 3 O VAL C 50 ? O VAL C 350 N GLY C 7 ? N GLY C 307 G 1 2 O LYS D 27 ? O LYS D 427 N VAL D 24 ? N VAL D 424 G 2 3 O THR D 21 ? O THR D 421 N LYS D 13 ? N LYS D 413 H 1 2 O GLU D 65 ? O GLU D 465 N LYS D 53 ? N LYS D 453 H 2 3 O VAL D 50 ? O VAL D 450 N GLY D 7 ? N GLY D 407 I 1 2 O LYS E 27 ? O LYS E 527 N VAL E 24 ? N VAL E 524 I 2 3 O THR E 21 ? O THR E 521 N LYS E 13 ? N LYS E 513 J 1 2 O GLU E 65 ? O GLU E 565 N LYS E 53 ? N LYS E 553 J 2 3 O VAL E 50 ? O VAL E 550 N GLY E 7 ? N GLY E 507 # _database_PDB_matrix.entry_id 1D1I _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1D1I _atom_sites.fract_transf_matrix[1][1] 0.022608 _atom_sites.fract_transf_matrix[1][2] 0.003672 _atom_sites.fract_transf_matrix[1][3] 0.008386 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022954 _atom_sites.fract_transf_matrix[2][3] 0.008284 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.020565 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 THR 1 101 101 THR THR A . n A 1 2 PRO 2 102 102 PRO PRO A . n A 1 3 ASP 3 103 103 ASP ASP A . n A 1 4 CYS 4 104 104 CYS CYS A . n A 1 5 VAL 5 105 105 VAL VAL A . n A 1 6 THR 6 106 106 THR THR A . n A 1 7 GLY 7 107 107 GLY GLY A . n A 1 8 LYS 8 108 108 LYS LYS A . n A 1 9 VAL 9 109 109 VAL VAL A . n A 1 10 GLU 10 110 110 GLU GLU A . n A 1 11 TYR 11 111 111 TYR TYR A . n A 1 12 THR 12 112 112 THR THR A . n A 1 13 LYS 13 113 113 LYS LYS A . n A 1 14 TYR 14 114 114 TYR TYR A . n A 1 15 ASN 15 115 115 ASN ASN A . n A 1 16 ASP 16 116 116 ASP ASP A . n A 1 17 ASP 17 117 117 ASP ASP A . n A 1 18 ASP 18 118 118 ASP ASP A . n A 1 19 THR 19 119 119 THR THR A . n A 1 20 PHE 20 120 120 PHE PHE A . n A 1 21 THR 21 121 121 THR THR A . n A 1 22 VAL 22 122 122 VAL VAL A . n A 1 23 LYS 23 123 123 LYS LYS A . n A 1 24 VAL 24 124 124 VAL VAL A . n A 1 25 GLY 25 125 125 GLY GLY A . n A 1 26 ASP 26 126 126 ASP ASP A . n A 1 27 LYS 27 127 127 LYS LYS A . n A 1 28 GLU 28 128 128 GLU GLU A . n A 1 29 LEU 29 129 129 LEU LEU A . n A 1 30 PHE 30 130 130 PHE PHE A . n A 1 31 THR 31 131 131 THR THR A . n A 1 32 ASN 32 132 132 ASN ASN A . n A 1 33 ARG 33 133 133 ARG ARG A . n A 1 34 ALA 34 134 134 ALA ALA A . n A 1 35 ASN 35 135 135 ASN ASN A . n A 1 36 LEU 36 136 136 LEU LEU A . n A 1 37 GLN 37 137 137 GLN GLN A . n A 1 38 SER 38 138 138 SER SER A . n A 1 39 LEU 39 139 139 LEU LEU A . n A 1 40 LEU 40 140 140 LEU LEU A . n A 1 41 LEU 41 141 141 LEU LEU A . n A 1 42 SER 42 142 142 SER SER A . n A 1 43 ALA 43 143 143 ALA ALA A . n A 1 44 GLN 44 144 144 GLN GLN A . n A 1 45 ILE 45 145 145 ILE ILE A . n A 1 46 THR 46 146 146 THR THR A . n A 1 47 GLY 47 147 147 GLY GLY A . n A 1 48 MET 48 148 148 MET MET A . n A 1 49 THR 49 149 149 THR THR A . n A 1 50 VAL 50 150 150 VAL VAL A . n A 1 51 THR 51 151 151 THR THR A . n A 1 52 ILE 52 152 152 ILE ILE A . n A 1 53 LYS 53 153 153 LYS LYS A . n A 1 54 THR 54 154 154 THR THR A . n A 1 55 ASN 55 155 155 ASN ASN A . n A 1 56 ALA 56 156 156 ALA ALA A . n A 1 57 CYS 57 157 157 CYS CYS A . n A 1 58 HIS 58 158 158 HIS HIS A . n A 1 59 ASN 59 159 159 ASN ASN A . n A 1 60 GLY 60 160 160 GLY GLY A . n A 1 61 GLY 61 161 161 GLY GLY A . n A 1 62 GLY 62 162 162 GLY GLY A . n A 1 63 PHE 63 163 163 PHE PHE A . n A 1 64 SER 64 164 164 SER SER A . n A 1 65 GLU 65 165 165 GLU GLU A . n A 1 66 VAL 66 166 166 VAL VAL A . n A 1 67 ILE 67 167 167 ILE ILE A . n A 1 68 PHE 68 168 168 PHE PHE A . n A 1 69 ARG 69 169 169 ARG ARG A . n B 1 1 THR 1 201 201 THR THR B . n B 1 2 PRO 2 202 202 PRO PRO B . n B 1 3 ASP 3 203 203 ASP ASP B . n B 1 4 CYS 4 204 204 CYS CYS B . n B 1 5 VAL 5 205 205 VAL VAL B . n B 1 6 THR 6 206 206 THR THR B . n B 1 7 GLY 7 207 207 GLY GLY B . n B 1 8 LYS 8 208 208 LYS LYS B . n B 1 9 VAL 9 209 209 VAL VAL B . n B 1 10 GLU 10 210 210 GLU GLU B . n B 1 11 TYR 11 211 211 TYR TYR B . n B 1 12 THR 12 212 212 THR THR B . n B 1 13 LYS 13 213 213 LYS LYS B . n B 1 14 TYR 14 214 214 TYR TYR B . n B 1 15 ASN 15 215 215 ASN ASN B . n B 1 16 ASP 16 216 216 ASP ASP B . n B 1 17 ASP 17 217 217 ASP ASP B . n B 1 18 ASP 18 218 218 ASP ASP B . n B 1 19 THR 19 219 219 THR THR B . n B 1 20 PHE 20 220 220 PHE PHE B . n B 1 21 THR 21 221 221 THR THR B . n B 1 22 VAL 22 222 222 VAL VAL B . n B 1 23 LYS 23 223 223 LYS LYS B . n B 1 24 VAL 24 224 224 VAL VAL B . n B 1 25 GLY 25 225 225 GLY GLY B . n B 1 26 ASP 26 226 226 ASP ASP B . n B 1 27 LYS 27 227 227 LYS LYS B . n B 1 28 GLU 28 228 228 GLU GLU B . n B 1 29 LEU 29 229 229 LEU LEU B . n B 1 30 PHE 30 230 230 PHE PHE B . n B 1 31 THR 31 231 231 THR THR B . n B 1 32 ASN 32 232 232 ASN ASN B . n B 1 33 ARG 33 233 233 ARG ARG B . n B 1 34 ALA 34 234 234 ALA ALA B . n B 1 35 ASN 35 235 235 ASN ASN B . n B 1 36 LEU 36 236 236 LEU LEU B . n B 1 37 GLN 37 237 237 GLN GLN B . n B 1 38 SER 38 238 238 SER SER B . n B 1 39 LEU 39 239 239 LEU LEU B . n B 1 40 LEU 40 240 240 LEU LEU B . n B 1 41 LEU 41 241 241 LEU LEU B . n B 1 42 SER 42 242 242 SER SER B . n B 1 43 ALA 43 243 243 ALA ALA B . n B 1 44 GLN 44 244 244 GLN GLN B . n B 1 45 ILE 45 245 245 ILE ILE B . n B 1 46 THR 46 246 246 THR THR B . n B 1 47 GLY 47 247 247 GLY GLY B . n B 1 48 MET 48 248 248 MET MET B . n B 1 49 THR 49 249 249 THR THR B . n B 1 50 VAL 50 250 250 VAL VAL B . n B 1 51 THR 51 251 251 THR THR B . n B 1 52 ILE 52 252 252 ILE ILE B . n B 1 53 LYS 53 253 253 LYS LYS B . n B 1 54 THR 54 254 254 THR THR B . n B 1 55 ASN 55 255 255 ASN ASN B . n B 1 56 ALA 56 256 256 ALA ALA B . n B 1 57 CYS 57 257 257 CYS CYS B . n B 1 58 HIS 58 258 258 HIS HIS B . n B 1 59 ASN 59 259 259 ASN ASN B . n B 1 60 GLY 60 260 260 GLY GLY B . n B 1 61 GLY 61 261 261 GLY GLY B . n B 1 62 GLY 62 262 262 GLY GLY B . n B 1 63 PHE 63 263 263 PHE PHE B . n B 1 64 SER 64 264 264 SER SER B . n B 1 65 GLU 65 265 265 GLU GLU B . n B 1 66 VAL 66 266 266 VAL VAL B . n B 1 67 ILE 67 267 267 ILE ILE B . n B 1 68 PHE 68 268 268 PHE PHE B . n B 1 69 ARG 69 269 269 ARG ARG B . n C 1 1 THR 1 301 301 THR THR C . n C 1 2 PRO 2 302 302 PRO PRO C . n C 1 3 ASP 3 303 303 ASP ASP C . n C 1 4 CYS 4 304 304 CYS CYS C . n C 1 5 VAL 5 305 305 VAL VAL C . n C 1 6 THR 6 306 306 THR THR C . n C 1 7 GLY 7 307 307 GLY GLY C . n C 1 8 LYS 8 308 308 LYS LYS C . n C 1 9 VAL 9 309 309 VAL VAL C . n C 1 10 GLU 10 310 310 GLU GLU C . n C 1 11 TYR 11 311 311 TYR TYR C . n C 1 12 THR 12 312 312 THR THR C . n C 1 13 LYS 13 313 313 LYS LYS C . n C 1 14 TYR 14 314 314 TYR TYR C . n C 1 15 ASN 15 315 315 ASN ASN C . n C 1 16 ASP 16 316 316 ASP ASP C . n C 1 17 ASP 17 317 317 ASP ASP C . n C 1 18 ASP 18 318 318 ASP ASP C . n C 1 19 THR 19 319 319 THR THR C . n C 1 20 PHE 20 320 320 PHE PHE C . n C 1 21 THR 21 321 321 THR THR C . n C 1 22 VAL 22 322 322 VAL VAL C . n C 1 23 LYS 23 323 323 LYS LYS C . n C 1 24 VAL 24 324 324 VAL VAL C . n C 1 25 GLY 25 325 325 GLY GLY C . n C 1 26 ASP 26 326 326 ASP ASP C . n C 1 27 LYS 27 327 327 LYS LYS C . n C 1 28 GLU 28 328 328 GLU GLU C . n C 1 29 LEU 29 329 329 LEU LEU C . n C 1 30 PHE 30 330 330 PHE PHE C . n C 1 31 THR 31 331 331 THR THR C . n C 1 32 ASN 32 332 332 ASN ASN C . n C 1 33 ARG 33 333 333 ARG ARG C . n C 1 34 ALA 34 334 334 ALA ALA C . n C 1 35 ASN 35 335 335 ASN ASN C . n C 1 36 LEU 36 336 336 LEU LEU C . n C 1 37 GLN 37 337 337 GLN GLN C . n C 1 38 SER 38 338 338 SER SER C . n C 1 39 LEU 39 339 339 LEU LEU C . n C 1 40 LEU 40 340 340 LEU LEU C . n C 1 41 LEU 41 341 341 LEU LEU C . n C 1 42 SER 42 342 342 SER SER C . n C 1 43 ALA 43 343 343 ALA ALA C . n C 1 44 GLN 44 344 344 GLN GLN C . n C 1 45 ILE 45 345 345 ILE ILE C . n C 1 46 THR 46 346 346 THR THR C . n C 1 47 GLY 47 347 347 GLY GLY C . n C 1 48 MET 48 348 348 MET MET C . n C 1 49 THR 49 349 349 THR THR C . n C 1 50 VAL 50 350 350 VAL VAL C . n C 1 51 THR 51 351 351 THR THR C . n C 1 52 ILE 52 352 352 ILE ILE C . n C 1 53 LYS 53 353 353 LYS LYS C . n C 1 54 THR 54 354 354 THR THR C . n C 1 55 ASN 55 355 355 ASN ASN C . n C 1 56 ALA 56 356 356 ALA ALA C . n C 1 57 CYS 57 357 357 CYS CYS C . n C 1 58 HIS 58 358 358 HIS HIS C . n C 1 59 ASN 59 359 359 ASN ASN C . n C 1 60 GLY 60 360 360 GLY GLY C . n C 1 61 GLY 61 361 361 GLY GLY C . n C 1 62 GLY 62 362 362 GLY GLY C . n C 1 63 PHE 63 363 363 PHE PHE C . n C 1 64 SER 64 364 364 SER SER C . n C 1 65 GLU 65 365 365 GLU GLU C . n C 1 66 VAL 66 366 366 VAL VAL C . n C 1 67 ILE 67 367 367 ILE ILE C . n C 1 68 PHE 68 368 368 PHE PHE C . n C 1 69 ARG 69 369 369 ARG ARG C . n D 1 1 THR 1 401 401 THR THR D . n D 1 2 PRO 2 402 402 PRO PRO D . n D 1 3 ASP 3 403 403 ASP ASP D . n D 1 4 CYS 4 404 404 CYS CYS D . n D 1 5 VAL 5 405 405 VAL VAL D . n D 1 6 THR 6 406 406 THR THR D . n D 1 7 GLY 7 407 407 GLY GLY D . n D 1 8 LYS 8 408 408 LYS LYS D . n D 1 9 VAL 9 409 409 VAL VAL D . n D 1 10 GLU 10 410 410 GLU GLU D . n D 1 11 TYR 11 411 411 TYR TYR D . n D 1 12 THR 12 412 412 THR THR D . n D 1 13 LYS 13 413 413 LYS LYS D . n D 1 14 TYR 14 414 414 TYR TYR D . n D 1 15 ASN 15 415 415 ASN ASN D . n D 1 16 ASP 16 416 416 ASP ASP D . n D 1 17 ASP 17 417 417 ASP ASP D . n D 1 18 ASP 18 418 418 ASP ASP D . n D 1 19 THR 19 419 419 THR THR D . n D 1 20 PHE 20 420 420 PHE PHE D . n D 1 21 THR 21 421 421 THR THR D . n D 1 22 VAL 22 422 422 VAL VAL D . n D 1 23 LYS 23 423 423 LYS LYS D . n D 1 24 VAL 24 424 424 VAL VAL D . n D 1 25 GLY 25 425 425 GLY GLY D . n D 1 26 ASP 26 426 426 ASP ASP D . n D 1 27 LYS 27 427 427 LYS LYS D . n D 1 28 GLU 28 428 428 GLU GLU D . n D 1 29 LEU 29 429 429 LEU LEU D . n D 1 30 PHE 30 430 430 PHE PHE D . n D 1 31 THR 31 431 431 THR THR D . n D 1 32 ASN 32 432 432 ASN ASN D . n D 1 33 ARG 33 433 433 ARG ARG D . n D 1 34 ALA 34 434 434 ALA ALA D . n D 1 35 ASN 35 435 435 ASN ASN D . n D 1 36 LEU 36 436 436 LEU LEU D . n D 1 37 GLN 37 437 437 GLN GLN D . n D 1 38 SER 38 438 438 SER SER D . n D 1 39 LEU 39 439 439 LEU LEU D . n D 1 40 LEU 40 440 440 LEU LEU D . n D 1 41 LEU 41 441 441 LEU LEU D . n D 1 42 SER 42 442 442 SER SER D . n D 1 43 ALA 43 443 443 ALA ALA D . n D 1 44 GLN 44 444 444 GLN GLN D . n D 1 45 ILE 45 445 445 ILE ILE D . n D 1 46 THR 46 446 446 THR THR D . n D 1 47 GLY 47 447 447 GLY GLY D . n D 1 48 MET 48 448 448 MET MET D . n D 1 49 THR 49 449 449 THR THR D . n D 1 50 VAL 50 450 450 VAL VAL D . n D 1 51 THR 51 451 451 THR THR D . n D 1 52 ILE 52 452 452 ILE ILE D . n D 1 53 LYS 53 453 453 LYS LYS D . n D 1 54 THR 54 454 454 THR THR D . n D 1 55 ASN 55 455 455 ASN ASN D . n D 1 56 ALA 56 456 456 ALA ALA D . n D 1 57 CYS 57 457 457 CYS CYS D . n D 1 58 HIS 58 458 458 HIS HIS D . n D 1 59 ASN 59 459 459 ASN ASN D . n D 1 60 GLY 60 460 460 GLY GLY D . n D 1 61 GLY 61 461 461 GLY GLY D . n D 1 62 GLY 62 462 462 GLY GLY D . n D 1 63 PHE 63 463 463 PHE PHE D . n D 1 64 SER 64 464 464 SER SER D . n D 1 65 GLU 65 465 465 GLU GLU D . n D 1 66 VAL 66 466 466 VAL VAL D . n D 1 67 ILE 67 467 467 ILE ILE D . n D 1 68 PHE 68 468 468 PHE PHE D . n D 1 69 ARG 69 469 469 ARG ARG D . n E 1 1 THR 1 501 501 THR THR E . n E 1 2 PRO 2 502 502 PRO PRO E . n E 1 3 ASP 3 503 503 ASP ASP E . n E 1 4 CYS 4 504 504 CYS CYS E . n E 1 5 VAL 5 505 505 VAL VAL E . n E 1 6 THR 6 506 506 THR THR E . n E 1 7 GLY 7 507 507 GLY GLY E . n E 1 8 LYS 8 508 508 LYS LYS E . n E 1 9 VAL 9 509 509 VAL VAL E . n E 1 10 GLU 10 510 510 GLU GLU E . n E 1 11 TYR 11 511 511 TYR TYR E . n E 1 12 THR 12 512 512 THR THR E . n E 1 13 LYS 13 513 513 LYS LYS E . n E 1 14 TYR 14 514 514 TYR TYR E . n E 1 15 ASN 15 515 515 ASN ASN E . n E 1 16 ASP 16 516 516 ASP ASP E . n E 1 17 ASP 17 517 517 ASP ASP E . n E 1 18 ASP 18 518 518 ASP ASP E . n E 1 19 THR 19 519 519 THR THR E . n E 1 20 PHE 20 520 520 PHE PHE E . n E 1 21 THR 21 521 521 THR THR E . n E 1 22 VAL 22 522 522 VAL VAL E . n E 1 23 LYS 23 523 523 LYS LYS E . n E 1 24 VAL 24 524 524 VAL VAL E . n E 1 25 GLY 25 525 525 GLY GLY E . n E 1 26 ASP 26 526 526 ASP ASP E . n E 1 27 LYS 27 527 527 LYS LYS E . n E 1 28 GLU 28 528 528 GLU GLU E . n E 1 29 LEU 29 529 529 LEU LEU E . n E 1 30 PHE 30 530 530 PHE PHE E . n E 1 31 THR 31 531 531 THR THR E . n E 1 32 ASN 32 532 532 ASN ASN E . n E 1 33 ARG 33 533 533 ARG ARG E . n E 1 34 ALA 34 534 534 ALA ALA E . n E 1 35 ASN 35 535 535 ASN ASN E . n E 1 36 LEU 36 536 536 LEU LEU E . n E 1 37 GLN 37 537 537 GLN GLN E . n E 1 38 SER 38 538 538 SER SER E . n E 1 39 LEU 39 539 539 LEU LEU E . n E 1 40 LEU 40 540 540 LEU LEU E . n E 1 41 LEU 41 541 541 LEU LEU E . n E 1 42 SER 42 542 542 SER SER E . n E 1 43 ALA 43 543 543 ALA ALA E . n E 1 44 GLN 44 544 544 GLN GLN E . n E 1 45 ILE 45 545 545 ILE ILE E . n E 1 46 THR 46 546 546 THR THR E . n E 1 47 GLY 47 547 547 GLY GLY E . n E 1 48 MET 48 548 548 MET MET E . n E 1 49 THR 49 549 549 THR THR E . n E 1 50 VAL 50 550 550 VAL VAL E . n E 1 51 THR 51 551 551 THR THR E . n E 1 52 ILE 52 552 552 ILE ILE E . n E 1 53 LYS 53 553 553 LYS LYS E . n E 1 54 THR 54 554 554 THR THR E . n E 1 55 ASN 55 555 555 ASN ASN E . n E 1 56 ALA 56 556 556 ALA ALA E . n E 1 57 CYS 57 557 557 CYS CYS E . n E 1 58 HIS 58 558 558 HIS HIS E . n E 1 59 ASN 59 559 559 ASN ASN E . n E 1 60 GLY 60 560 560 GLY GLY E . n E 1 61 GLY 61 561 561 GLY GLY E . n E 1 62 GLY 62 562 562 GLY GLY E . n E 1 63 PHE 63 563 563 PHE PHE E . n E 1 64 SER 64 564 564 SER SER E . n E 1 65 GLU 65 565 565 GLU GLU E . n E 1 66 VAL 66 566 566 VAL VAL E . n E 1 67 ILE 67 567 567 ILE ILE E . n E 1 68 PHE 68 568 568 PHE PHE E . n E 1 69 ARG 69 569 569 ARG ARG E . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code L 4 HOH 1 643 643 HOH HOH A . L 4 HOH 2 650 650 HOH HOH A . L 4 HOH 3 651 651 HOH HOH A . L 4 HOH 4 652 652 HOH HOH A . L 4 HOH 5 656 656 HOH HOH A . L 4 HOH 6 666 666 HOH HOH A . L 4 HOH 7 669 669 HOH HOH A . L 4 HOH 8 671 671 HOH HOH A . L 4 HOH 9 673 673 HOH HOH A . L 4 HOH 10 675 675 HOH HOH A . L 4 HOH 11 679 679 HOH HOH A . L 4 HOH 12 683 683 HOH HOH A . L 4 HOH 13 685 685 HOH HOH A . L 4 HOH 14 687 687 HOH HOH A . L 4 HOH 15 706 706 HOH HOH A . L 4 HOH 16 711 711 HOH HOH A . L 4 HOH 17 712 712 HOH HOH A . L 4 HOH 18 715 715 HOH HOH A . L 4 HOH 19 716 716 HOH HOH A . L 4 HOH 20 728 728 HOH HOH A . L 4 HOH 21 729 729 HOH HOH A . L 4 HOH 22 732 732 HOH HOH A . L 4 HOH 23 733 733 HOH HOH A . L 4 HOH 24 751 751 HOH HOH A . L 4 HOH 25 753 753 HOH HOH A . L 4 HOH 26 759 759 HOH HOH A . L 4 HOH 27 764 764 HOH HOH A . L 4 HOH 28 789 789 HOH HOH A . L 4 HOH 29 790 790 HOH HOH A . L 4 HOH 30 795 795 HOH HOH A . L 4 HOH 31 801 801 HOH HOH A . L 4 HOH 32 807 807 HOH HOH A . L 4 HOH 33 810 810 HOH HOH A . L 4 HOH 34 815 815 HOH HOH A . L 4 HOH 35 836 836 HOH HOH A . M 4 HOH 1 601 601 HOH HOH B . M 4 HOH 2 604 604 HOH HOH B . M 4 HOH 3 605 605 HOH HOH B . M 4 HOH 4 609 609 HOH HOH B . M 4 HOH 5 610 610 HOH HOH B . M 4 HOH 6 611 611 HOH HOH B . M 4 HOH 7 616 616 HOH HOH B . M 4 HOH 8 619 619 HOH HOH B . M 4 HOH 9 623 623 HOH HOH B . M 4 HOH 10 624 624 HOH HOH B . M 4 HOH 11 627 627 HOH HOH B . M 4 HOH 12 629 629 HOH HOH B . M 4 HOH 13 634 634 HOH HOH B . M 4 HOH 14 637 637 HOH HOH B . M 4 HOH 15 639 639 HOH HOH B . M 4 HOH 16 641 641 HOH HOH B . M 4 HOH 17 644 644 HOH HOH B . M 4 HOH 18 645 645 HOH HOH B . M 4 HOH 19 672 672 HOH HOH B . M 4 HOH 20 677 677 HOH HOH B . M 4 HOH 21 684 684 HOH HOH B . M 4 HOH 22 689 689 HOH HOH B . M 4 HOH 23 690 690 HOH HOH B . M 4 HOH 24 691 691 HOH HOH B . M 4 HOH 25 699 699 HOH HOH B . M 4 HOH 26 719 719 HOH HOH B . M 4 HOH 27 720 720 HOH HOH B . M 4 HOH 28 722 722 HOH HOH B . M 4 HOH 29 735 735 HOH HOH B . M 4 HOH 30 757 757 HOH HOH B . M 4 HOH 31 768 768 HOH HOH B . M 4 HOH 32 770 770 HOH HOH B . M 4 HOH 33 772 772 HOH HOH B . M 4 HOH 34 778 778 HOH HOH B . M 4 HOH 35 787 787 HOH HOH B . M 4 HOH 36 804 804 HOH HOH B . M 4 HOH 37 809 809 HOH HOH B . M 4 HOH 38 812 812 HOH HOH B . M 4 HOH 39 823 823 HOH HOH B . M 4 HOH 40 846 846 HOH HOH B . N 4 HOH 1 602 602 HOH HOH C . N 4 HOH 2 603 603 HOH HOH C . N 4 HOH 3 607 607 HOH HOH C . N 4 HOH 4 608 608 HOH HOH C . N 4 HOH 5 612 612 HOH HOH C . N 4 HOH 6 613 613 HOH HOH C . N 4 HOH 7 614 614 HOH HOH C . N 4 HOH 8 618 618 HOH HOH C . N 4 HOH 9 620 620 HOH HOH C . N 4 HOH 10 621 621 HOH HOH C . N 4 HOH 11 625 625 HOH HOH C . N 4 HOH 12 630 630 HOH HOH C . N 4 HOH 13 631 631 HOH HOH C . N 4 HOH 14 632 632 HOH HOH C . N 4 HOH 15 633 633 HOH HOH C . N 4 HOH 16 640 640 HOH HOH C . N 4 HOH 17 646 646 HOH HOH C . N 4 HOH 18 665 665 HOH HOH C . N 4 HOH 19 681 681 HOH HOH C . N 4 HOH 20 686 686 HOH HOH C . N 4 HOH 21 688 688 HOH HOH C . N 4 HOH 22 693 693 HOH HOH C . N 4 HOH 23 694 694 HOH HOH C . N 4 HOH 24 695 695 HOH HOH C . N 4 HOH 25 697 697 HOH HOH C . N 4 HOH 26 700 700 HOH HOH C . N 4 HOH 27 701 701 HOH HOH C . N 4 HOH 28 714 714 HOH HOH C . N 4 HOH 29 717 717 HOH HOH C . N 4 HOH 30 723 723 HOH HOH C . N 4 HOH 31 724 724 HOH HOH C . N 4 HOH 32 727 727 HOH HOH C . N 4 HOH 33 741 741 HOH HOH C . N 4 HOH 34 756 756 HOH HOH C . N 4 HOH 35 773 773 HOH HOH C . N 4 HOH 36 788 788 HOH HOH C . N 4 HOH 37 803 803 HOH HOH C . N 4 HOH 38 811 811 HOH HOH C . N 4 HOH 39 839 839 HOH HOH C . N 4 HOH 40 844 844 HOH HOH C . N 4 HOH 41 850 850 HOH HOH C . O 4 HOH 1 606 606 HOH HOH D . O 4 HOH 2 649 649 HOH HOH D . O 4 HOH 3 654 654 HOH HOH D . O 4 HOH 4 655 655 HOH HOH D . O 4 HOH 5 657 657 HOH HOH D . O 4 HOH 6 658 658 HOH HOH D . O 4 HOH 7 659 659 HOH HOH D . O 4 HOH 8 660 660 HOH HOH D . O 4 HOH 9 662 662 HOH HOH D . O 4 HOH 10 664 664 HOH HOH D . O 4 HOH 11 670 670 HOH HOH D . O 4 HOH 12 674 674 HOH HOH D . O 4 HOH 13 676 676 HOH HOH D . O 4 HOH 14 678 678 HOH HOH D . O 4 HOH 15 680 680 HOH HOH D . O 4 HOH 16 682 682 HOH HOH D . O 4 HOH 17 703 703 HOH HOH D . O 4 HOH 18 705 705 HOH HOH D . O 4 HOH 19 707 707 HOH HOH D . O 4 HOH 20 708 708 HOH HOH D . O 4 HOH 21 709 709 HOH HOH D . O 4 HOH 22 710 710 HOH HOH D . O 4 HOH 23 725 725 HOH HOH D . O 4 HOH 24 726 726 HOH HOH D . O 4 HOH 25 730 730 HOH HOH D . O 4 HOH 26 731 731 HOH HOH D . O 4 HOH 27 743 743 HOH HOH D . O 4 HOH 28 744 744 HOH HOH D . O 4 HOH 29 752 752 HOH HOH D . O 4 HOH 30 769 769 HOH HOH D . O 4 HOH 31 779 779 HOH HOH D . O 4 HOH 32 782 782 HOH HOH D . O 4 HOH 33 797 797 HOH HOH D . O 4 HOH 34 805 805 HOH HOH D . O 4 HOH 35 816 816 HOH HOH D . O 4 HOH 36 822 822 HOH HOH D . O 4 HOH 37 831 831 HOH HOH D . O 4 HOH 38 837 837 HOH HOH D . O 4 HOH 39 841 841 HOH HOH D . O 4 HOH 40 848 848 HOH HOH D . O 4 HOH 41 849 849 HOH HOH D . P 4 HOH 1 615 615 HOH HOH E . P 4 HOH 2 617 617 HOH HOH E . P 4 HOH 3 622 622 HOH HOH E . P 4 HOH 4 626 626 HOH HOH E . P 4 HOH 5 628 628 HOH HOH E . P 4 HOH 6 635 635 HOH HOH E . P 4 HOH 7 636 636 HOH HOH E . P 4 HOH 8 638 638 HOH HOH E . P 4 HOH 9 642 642 HOH HOH E . P 4 HOH 10 647 647 HOH HOH E . P 4 HOH 11 648 648 HOH HOH E . P 4 HOH 12 653 653 HOH HOH E . P 4 HOH 13 661 661 HOH HOH E . P 4 HOH 14 663 663 HOH HOH E . P 4 HOH 15 667 667 HOH HOH E . P 4 HOH 16 668 668 HOH HOH E . P 4 HOH 17 692 692 HOH HOH E . P 4 HOH 18 696 696 HOH HOH E . P 4 HOH 19 698 698 HOH HOH E . P 4 HOH 20 702 702 HOH HOH E . P 4 HOH 21 704 704 HOH HOH E . P 4 HOH 22 713 713 HOH HOH E . P 4 HOH 23 718 718 HOH HOH E . P 4 HOH 24 721 721 HOH HOH E . P 4 HOH 25 738 738 HOH HOH E . P 4 HOH 26 739 739 HOH HOH E . P 4 HOH 27 745 745 HOH HOH E . P 4 HOH 28 747 747 HOH HOH E . P 4 HOH 29 749 749 HOH HOH E . P 4 HOH 30 761 761 HOH HOH E . P 4 HOH 31 784 784 HOH HOH E . P 4 HOH 32 786 786 HOH HOH E . P 4 HOH 33 793 793 HOH HOH E . P 4 HOH 34 798 798 HOH HOH E . P 4 HOH 35 814 814 HOH HOH E . P 4 HOH 36 817 817 HOH HOH E . P 4 HOH 37 826 826 HOH HOH E . P 4 HOH 38 829 829 HOH HOH E . P 4 HOH 39 834 834 HOH HOH E . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 11550 ? 1 MORE 19 ? 1 'SSA (A^2)' 13420 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2000-09-20 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2018-04-04 5 'Structure model' 2 0 2020-07-29 6 'Structure model' 2 1 2021-11-03 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 5 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 5 'Structure model' 'Atomic model' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Derived calculations' 7 5 'Structure model' 'Structure summary' 8 6 'Structure model' 'Database references' 9 6 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' diffrn_source 2 5 'Structure model' atom_site 3 5 'Structure model' chem_comp 4 5 'Structure model' entity 5 5 'Structure model' pdbx_branch_scheme 6 5 'Structure model' pdbx_chem_comp_identifier 7 5 'Structure model' pdbx_entity_branch 8 5 'Structure model' pdbx_entity_branch_descriptor 9 5 'Structure model' pdbx_entity_branch_link 10 5 'Structure model' pdbx_entity_branch_list 11 5 'Structure model' pdbx_entity_nonpoly 12 5 'Structure model' pdbx_nonpoly_scheme 13 5 'Structure model' pdbx_struct_assembly_gen 14 5 'Structure model' struct_asym 15 5 'Structure model' struct_conn 16 5 'Structure model' struct_site 17 5 'Structure model' struct_site_gen 18 6 'Structure model' chem_comp 19 6 'Structure model' database_2 20 6 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_diffrn_source.type' 2 5 'Structure model' '_atom_site.B_iso_or_equiv' 3 5 'Structure model' '_atom_site.Cartn_x' 4 5 'Structure model' '_atom_site.Cartn_y' 5 5 'Structure model' '_atom_site.Cartn_z' 6 5 'Structure model' '_atom_site.auth_asym_id' 7 5 'Structure model' '_atom_site.auth_atom_id' 8 5 'Structure model' '_atom_site.auth_comp_id' 9 5 'Structure model' '_atom_site.auth_seq_id' 10 5 'Structure model' '_atom_site.label_asym_id' 11 5 'Structure model' '_atom_site.label_atom_id' 12 5 'Structure model' '_atom_site.label_comp_id' 13 5 'Structure model' '_atom_site.label_entity_id' 14 5 'Structure model' '_atom_site.type_symbol' 15 5 'Structure model' '_chem_comp.name' 16 5 'Structure model' '_chem_comp.type' 17 5 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 18 5 'Structure model' '_struct_conn.pdbx_dist_value' 19 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 20 5 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 21 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 22 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 23 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 24 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 25 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 26 5 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 27 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 28 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 29 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 30 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 31 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 32 6 'Structure model' '_chem_comp.pdbx_synonyms' 33 6 'Structure model' '_database_2.pdbx_DOI' 34 6 'Structure model' '_database_2.pdbx_database_accession' 35 6 'Structure model' '_struct_ref_seq_dif.details' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 AMoRE phasing . ? 3 X-PLOR refinement 3.851 ? 4 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CB A VAL 109 ? ? CG2 A VAL 109 ? ? 1.380 1.524 -0.144 0.021 N 2 1 NE2 A HIS 158 ? ? CD2 A HIS 158 ? ? 1.288 1.373 -0.085 0.011 N 3 1 NE2 B HIS 258 ? ? CD2 B HIS 258 ? ? 1.299 1.373 -0.074 0.011 N 4 1 NE2 C HIS 358 ? ? CD2 C HIS 358 ? ? 1.286 1.373 -0.087 0.011 N 5 1 NE2 D HIS 458 ? ? CD2 D HIS 458 ? ? 1.306 1.373 -0.067 0.011 N 6 1 NE2 E HIS 558 ? ? CD2 E HIS 558 ? ? 1.304 1.373 -0.069 0.011 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A TYR 111 ? ? CG A TYR 111 ? ? CD1 A TYR 111 ? ? 116.50 121.00 -4.50 0.60 N 2 1 CA A LEU 129 ? ? CB A LEU 129 ? ? CG A LEU 129 ? ? 129.19 115.30 13.89 2.30 N 3 1 CD A ARG 169 ? ? NE A ARG 169 ? ? CZ A ARG 169 ? ? 155.01 123.60 31.41 1.40 N 4 1 NE A ARG 169 ? ? CZ A ARG 169 ? ? NH1 A ARG 169 ? ? 130.75 120.30 10.45 0.50 N 5 1 NE A ARG 169 ? ? CZ A ARG 169 ? ? NH2 A ARG 169 ? ? 108.17 120.30 -12.13 0.50 N 6 1 CB B TYR 211 ? ? CG B TYR 211 ? ? CD1 B TYR 211 ? ? 116.58 121.00 -4.42 0.60 N 7 1 CD B ARG 269 ? ? NE B ARG 269 ? ? CZ B ARG 269 ? ? 154.76 123.60 31.16 1.40 N 8 1 NE B ARG 269 ? ? CZ B ARG 269 ? ? NH1 B ARG 269 ? ? 131.28 120.30 10.98 0.50 N 9 1 NE B ARG 269 ? ? CZ B ARG 269 ? ? NH2 B ARG 269 ? ? 107.16 120.30 -13.14 0.50 N 10 1 CB C TYR 311 ? ? CG C TYR 311 ? ? CD1 C TYR 311 ? ? 116.59 121.00 -4.41 0.60 N 11 1 CA C LEU 329 ? ? CB C LEU 329 ? ? CG C LEU 329 ? ? 130.07 115.30 14.77 2.30 N 12 1 NE C ARG 333 ? ? CZ C ARG 333 ? ? NH1 C ARG 333 ? ? 123.39 120.30 3.09 0.50 N 13 1 CD C ARG 369 ? ? NE C ARG 369 ? ? CZ C ARG 369 ? ? 146.84 123.60 23.24 1.40 N 14 1 NE C ARG 369 ? ? CZ C ARG 369 ? ? NH1 C ARG 369 ? ? 111.39 120.30 -8.91 0.50 N 15 1 NE C ARG 369 ? ? CZ C ARG 369 ? ? NH2 C ARG 369 ? ? 127.52 120.30 7.22 0.50 N 16 1 CB D TYR 411 ? ? CG D TYR 411 ? ? CD1 D TYR 411 ? ? 116.17 121.00 -4.83 0.60 N 17 1 CA D LEU 429 ? ? CB D LEU 429 ? ? CG D LEU 429 ? ? 129.79 115.30 14.49 2.30 N 18 1 CD D ARG 469 ? ? NE D ARG 469 ? ? CZ D ARG 469 ? ? 147.20 123.60 23.60 1.40 N 19 1 NE D ARG 469 ? ? CZ D ARG 469 ? ? NH1 D ARG 469 ? ? 110.99 120.30 -9.31 0.50 N 20 1 NE D ARG 469 ? ? CZ D ARG 469 ? ? NH2 D ARG 469 ? ? 128.66 120.30 8.36 0.50 N 21 1 CB E TYR 511 ? ? CG E TYR 511 ? ? CD1 E TYR 511 ? ? 116.76 121.00 -4.24 0.60 N 22 1 CD E ARG 569 ? ? NE E ARG 569 ? ? CZ E ARG 569 ? ? 147.08 123.60 23.48 1.40 N 23 1 NE E ARG 569 ? ? CZ E ARG 569 ? ? NH1 E ARG 569 ? ? 111.08 120.30 -9.22 0.50 N 24 1 NE E ARG 569 ? ? CZ E ARG 569 ? ? NH2 E ARG 569 ? ? 128.03 120.30 7.73 0.50 N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ALA _pdbx_validate_torsion.auth_asym_id B _pdbx_validate_torsion.auth_seq_id 256 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -100.61 _pdbx_validate_torsion.psi 64.52 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero F 2 GAL 1 F GAL 1 F GAL 171 n F 2 GLA 2 F GLA 2 F GAL 170 n G 3 BGC 1 G BGC 1 F BGC 192 n G 3 GAL 2 G GAL 2 F GAL 191 n G 3 GLA 3 G GLA 3 F GAL 190 n H 3 BGC 1 H BGC 1 F BGC 292 n H 3 GAL 2 H GAL 2 F GAL 291 n H 3 GLA 3 H GLA 3 F GAL 290 n I 3 BGC 1 I BGC 1 F BGC 392 n I 3 GAL 2 I GAL 2 F GAL 391 n I 3 GLA 3 I GLA 3 F GAL 390 n J 3 BGC 1 J BGC 1 F BGC 492 n J 3 GAL 2 J GAL 2 F GAL 491 n J 3 GLA 3 J GLA 3 F GAL 490 n K 3 BGC 1 K BGC 1 F BGC 592 n K 3 GAL 2 K GAL 2 F GAL 591 n K 3 GLA 3 K GLA 3 F GAL 590 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BGC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpb BGC 'COMMON NAME' GMML 1.0 b-D-glucopyranose BGC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Glcp BGC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Glc GAL 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpb GAL 'COMMON NAME' GMML 1.0 b-D-galactopyranose GAL 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Galp GAL 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Gal GLA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpa GLA 'COMMON NAME' GMML 1.0 a-D-galactopyranose GLA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Galp GLA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Gal # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 2 oligosaccharide 3 oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DGalpa1-4DGalpb1-ROH 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/2,2,1/[a2112h-1b_1-5][a2112h-1a_1-5]/1-2/a4-b1' WURCS PDB2Glycan 1.1.0 3 2 '[][b-D-Galp]{[(4+1)][a-D-Galp]{}}' LINUCS PDB-CARE ? 4 3 DGalpa1-4DGalpb1-4DGlcpb1-ROH 'Glycam Condensed Sequence' GMML 1.0 5 3 'WURCS=2.0/3,3,2/[a2122h-1b_1-5][a2112h-1b_1-5][a2112h-1a_1-5]/1-2-3/a4-b1_b4-c1' WURCS PDB2Glycan 1.1.0 6 3 '[][b-D-Glcp]{[(4+1)][b-D-Galp]{[(4+1)][a-D-Galp]{}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 2 2 GLA C1 O1 1 GAL O4 HO4 sing ? 2 3 2 GAL C1 O1 1 BGC O4 HO4 sing ? 3 3 3 GLA C1 O1 2 GAL O4 HO4 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 GAL 1 n 2 GLA 2 n 3 BGC 1 n 3 GAL 2 n 3 GLA 3 n # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #