data_1DA3 # _entry.id 1DA3 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.385 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1DA3 pdb_00001da3 10.2210/pdb1da3/pdb RCSB BDJB48 ? ? WWPDB D_1000172698 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1993-04-15 2 'Structure model' 1 1 2008-05-22 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_struct_conn_angle 5 4 'Structure model' struct_conn 6 4 'Structure model' struct_conn_type 7 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.value' 6 4 'Structure model' '_struct_conn.conn_type_id' 7 4 'Structure model' '_struct_conn.id' 8 4 'Structure model' '_struct_conn.pdbx_dist_value' 9 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 10 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 11 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 12 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 13 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 14 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 15 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 16 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 17 4 'Structure model' '_struct_conn.ptnr1_symmetry' 18 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 19 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 20 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 21 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 22 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 23 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 24 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 25 4 'Structure model' '_struct_conn.ptnr2_symmetry' 26 4 'Structure model' '_struct_conn_type.id' 27 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 28 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 29 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1DA3 _pdbx_database_status.recvd_initial_deposition_date 1992-11-09 _pdbx_database_status.deposit_site BNL _pdbx_database_status.process_site NDB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Baikalov, I.' 1 'Grzeskowiak, K.' 2 'Yanagi, K.' 3 'Quintana, J.' 4 'Dickerson, R.E.' 5 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'The crystal structure of the trigonal decamer C-G-A-T-C-G-6meA-T-C-G: a B-DNA helix with 10.6 base-pairs per turn.' J.Mol.Biol. 231 768 784 1993 JMOBAK UK 0022-2836 0070 ? 8515450 10.1006/jmbi.1993.1325 1 'The Structure of B-Helical C-G-A-T-C-G-A-T-C-G and Comparison with C-C-A-A-C-G- T-T-G-G. The Effect of Base Pair Reversals' J.Biol.Chem. 266 8861 8883 1991 JBCHA3 US 0021-9258 0071 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Baikalov, I.' 1 ? primary 'Grzeskowiak, K.' 2 ? primary 'Yanagi, K.' 3 ? primary 'Quintana, J.' 4 ? primary 'Dickerson, R.E.' 5 ? 1 'Grzeskowiak, K.' 6 ? 1 'Yanagi, K.' 7 ? 1 'Prive, G.G.' 8 ? 1 'Dickerson, R.E.' 9 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man ;DNA (5'-D(*CP*GP*AP*TP*CP*GP*(6MA)P*TP*CP*G)-3') ; 3059.031 2 ? ? ? ? 2 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 4 water nat water 18.015 53 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(DC)(DG)(DA)(DT)(DC)(DG)(6MA)(DT)(DC)(DG)' _entity_poly.pdbx_seq_one_letter_code_can CGATCGATCG _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CHLORIDE ION' CL 3 'MAGNESIUM ION' MG 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DG n 1 3 DA n 1 4 DT n 1 5 DC n 1 6 DG n 1 7 6MA n 1 8 DT n 1 9 DC n 1 10 DG n # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 6MA 'DNA linking' n "N6-METHYL-DEOXY-ADENOSINE-5'-MONOPHOSPHATE" ? 'C11 H16 N5 O6 P' 345.248 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC DC A . n A 1 2 DG 2 2 2 DG DG A . n A 1 3 DA 3 3 3 DA DA A . n A 1 4 DT 4 4 4 DT DT A . n A 1 5 DC 5 5 5 DC DC A . n A 1 6 DG 6 6 6 DG DG A . n A 1 7 6MA 7 7 7 6MA 6MA A . n A 1 8 DT 8 8 8 DT DT A . n A 1 9 DC 9 9 9 DC DC A . n A 1 10 DG 10 10 10 DG DG A . n B 1 1 DC 1 11 11 DC DC B . n B 1 2 DG 2 12 12 DG DG B . n B 1 3 DA 3 13 13 DA DA B . n B 1 4 DT 4 14 14 DT DT B . n B 1 5 DC 5 15 15 DC DC B . n B 1 6 DG 6 16 16 DG DG B . n B 1 7 6MA 7 17 17 6MA 6MA B . n B 1 8 DT 8 18 18 DT DT B . n B 1 9 DC 9 19 19 DC DC B . n B 1 10 DG 10 20 20 DG DG B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CL 1 21 21 CL CL B . D 3 MG 1 22 22 MG MG B . E 3 MG 1 23 23 MG MG B . F 4 HOH 1 24 24 HOH HOH A . F 4 HOH 2 25 25 HOH HOH A . F 4 HOH 3 26 26 HOH HOH A . F 4 HOH 4 29 29 HOH HOH A . F 4 HOH 5 31 31 HOH HOH A . F 4 HOH 6 34 34 HOH HOH A . F 4 HOH 7 39 39 HOH HOH A . F 4 HOH 8 47 47 HOH HOH A . F 4 HOH 9 50 50 HOH HOH A . F 4 HOH 10 52 52 HOH HOH A . F 4 HOH 11 53 53 HOH HOH A . F 4 HOH 12 56 56 HOH HOH A . F 4 HOH 13 57 57 HOH HOH A . F 4 HOH 14 58 58 HOH HOH A . F 4 HOH 15 62 62 HOH HOH A . F 4 HOH 16 64 64 HOH HOH A . F 4 HOH 17 66 66 HOH HOH A . F 4 HOH 18 67 67 HOH HOH A . F 4 HOH 19 68 68 HOH HOH A . G 4 HOH 1 27 27 HOH HOH B . G 4 HOH 2 28 28 HOH HOH B . G 4 HOH 3 30 30 HOH HOH B . G 4 HOH 4 32 32 HOH HOH B . G 4 HOH 5 33 33 HOH HOH B . G 4 HOH 6 35 35 HOH HOH B . G 4 HOH 7 36 36 HOH HOH B . G 4 HOH 8 37 37 HOH HOH B . G 4 HOH 9 38 38 HOH HOH B . G 4 HOH 10 40 40 HOH HOH B . G 4 HOH 11 41 41 HOH HOH B . G 4 HOH 12 42 42 HOH HOH B . G 4 HOH 13 43 43 HOH HOH B . G 4 HOH 14 44 44 HOH HOH B . G 4 HOH 15 45 45 HOH HOH B . G 4 HOH 16 46 46 HOH HOH B . G 4 HOH 17 48 48 HOH HOH B . G 4 HOH 18 49 49 HOH HOH B . G 4 HOH 19 51 51 HOH HOH B . G 4 HOH 20 54 54 HOH HOH B . G 4 HOH 21 55 55 HOH HOH B . G 4 HOH 22 59 59 HOH HOH B . G 4 HOH 23 60 60 HOH HOH B . G 4 HOH 24 61 61 HOH HOH B . G 4 HOH 25 63 63 HOH HOH B . G 4 HOH 26 65 65 HOH HOH B . G 4 HOH 27 69 69 HOH HOH B . G 4 HOH 28 70 70 HOH HOH B . G 4 HOH 29 71 71 HOH HOH B . G 4 HOH 30 72 72 HOH HOH B . G 4 HOH 31 73 73 HOH HOH B . G 4 HOH 32 74 74 HOH HOH B . G 4 HOH 33 75 75 HOH HOH B . G 4 HOH 34 76 76 HOH HOH B . # _software.name NUCLSQ _software.classification refinement _software.version . _software.citation_id ? _software.pdbx_ordinal 1 # _cell.entry_id 1DA3 _cell.length_a 33.378 _cell.length_b 33.378 _cell.length_c 98.302 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1DA3 _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 # _exptl.entry_id 1DA3 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.58 _exptl_crystal.density_percent_sol 52.39 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 277.00 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_details 'VAPOR DIFFUSION, SITTING DROP, temperature 277.00K' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 WATER ? ? ? 1 2 1 MPD ? ? ? 1 3 1 MGCL2 ? ? ? 1 4 2 WATER ? ? ? 1 5 2 MPD ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 273.00 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector DIFFRACTOMETER _diffrn_detector.type 'RIGAKU AFC-5R' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type RIGAKU _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1DA3 _reflns.observed_criterion_sigma_I 2.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 8.000 _reflns.d_resolution_high 2.000 _reflns.number_obs 2282 _reflns.number_all ? _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 1DA3 _refine.ls_number_reflns_obs 2282 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 8.000 _refine.ls_d_res_high 2.000 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.172 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 406 _refine_hist.pdbx_number_atoms_ligand 3 _refine_hist.number_atoms_solvent 53 _refine_hist.number_atoms_total 462 _refine_hist.d_res_high 2.000 _refine_hist.d_res_low 8.000 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function n_bond_d 0.017 ? ? ? 'X-RAY DIFFRACTION' ? n_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? n_planar_d ? ? ? ? 'X-RAY DIFFRACTION' ? n_hb_or_metal_coord ? ? ? ? 'X-RAY DIFFRACTION' ? n_sugar_bond_it ? ? ? ? 'X-RAY DIFFRACTION' ? n_sugar_angle_it ? ? ? ? 'X-RAY DIFFRACTION' ? n_phos_bond_it ? ? ? ? 'X-RAY DIFFRACTION' ? n_phos_angle_it ? ? ? ? 'X-RAY DIFFRACTION' ? n_bond_angle_restr ? ? ? ? 'X-RAY DIFFRACTION' ? n_dihedral_angle_restr ? ? ? ? 'X-RAY DIFFRACTION' ? n_impr_tor ? ? ? ? 'X-RAY DIFFRACTION' ? n_sugar_bond_d ? ? ? ? 'X-RAY DIFFRACTION' ? n_sugar_bond_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? n_phos_bond_d ? ? ? ? 'X-RAY DIFFRACTION' ? n_phos_bond_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? n_plane_restr ? ? ? ? 'X-RAY DIFFRACTION' ? n_chiral_restr ? ? ? ? 'X-RAY DIFFRACTION' ? n_singtor_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? n_multtor_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? n_xhyhbond_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 1DA3 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1DA3 _struct.title 'THE CRYSTAL STRUCTURE OF THE TRIGONAL DECAMER C-G-A-T-C-G-6MEA-T-C-G: A B-DNA HELIX WITH 10.6 BASE-PAIRS PER TURN' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1DA3 _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'B-DNA, DOUBLE HELIX, MODIFIED, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 4 ? G N N 4 ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 1DA3 _struct_ref.pdbx_db_accession 1DA3 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1DA3 A 1 ? 10 ? 1DA3 1 ? 10 ? 1 10 2 1 1DA3 B 1 ? 10 ? 1DA3 11 ? 20 ? 11 20 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A DG 6 "O3'" ? ? ? 1_555 A 6MA 7 P ? ? A DG 6 A 6MA 7 1_555 ? ? ? ? ? ? ? 1.621 ? ? covale2 covale both ? A 6MA 7 "O3'" ? ? ? 1_555 A DT 8 P ? ? A 6MA 7 A DT 8 1_555 ? ? ? ? ? ? ? 1.655 ? ? covale3 covale both ? B DG 6 "O3'" ? ? ? 1_555 B 6MA 7 P ? ? B DG 16 B 6MA 17 1_555 ? ? ? ? ? ? ? 1.570 ? ? covale4 covale both ? B 6MA 7 "O3'" ? ? ? 1_555 B DT 8 P ? ? B 6MA 17 B DT 18 1_555 ? ? ? ? ? ? ? 1.597 ? ? metalc1 metalc ? ? B DG 6 OP1 ? ? ? 1_555 E MG . MG ? ? B DG 16 B MG 23 1_555 ? ? ? ? ? ? ? 2.374 ? ? metalc2 metalc ? ? D MG . MG ? ? ? 4_555 G HOH . O ? ? B MG 22 B HOH 69 1_555 ? ? ? ? ? ? ? 1.992 ? ? metalc3 metalc ? ? D MG . MG ? ? ? 1_555 G HOH . O ? ? B MG 22 B HOH 69 1_555 ? ? ? ? ? ? ? 1.992 ? ? metalc4 metalc ? ? D MG . MG ? ? ? 4_555 G HOH . O ? ? B MG 22 B HOH 70 1_555 ? ? ? ? ? ? ? 2.071 ? ? metalc5 metalc ? ? D MG . MG ? ? ? 1_555 G HOH . O ? ? B MG 22 B HOH 70 1_555 ? ? ? ? ? ? ? 2.071 ? ? metalc6 metalc ? ? D MG . MG ? ? ? 1_555 G HOH . O ? ? B MG 22 B HOH 71 1_555 ? ? ? ? ? ? ? 2.087 ? ? metalc7 metalc ? ? E MG . MG ? ? ? 1_555 G HOH . O ? ? B MG 23 B HOH 72 1_555 ? ? ? ? ? ? ? 2.090 ? ? metalc8 metalc ? ? E MG . MG ? ? ? 1_555 G HOH . O ? ? B MG 23 B HOH 73 1_555 ? ? ? ? ? ? ? 1.932 ? ? metalc9 metalc ? ? E MG . MG ? ? ? 1_555 G HOH . O ? ? B MG 23 B HOH 74 1_555 ? ? ? ? ? ? ? 2.029 ? ? metalc10 metalc ? ? E MG . MG ? ? ? 1_555 G HOH . O ? ? B MG 23 B HOH 75 1_555 ? ? ? ? ? ? ? 2.050 ? ? metalc11 metalc ? ? E MG . MG ? ? ? 1_555 G HOH . O ? ? B MG 23 B HOH 76 1_555 ? ? ? ? ? ? ? 2.010 ? ? hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 B DG 10 N1 ? ? A DC 1 B DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DG 10 O6 ? ? A DC 1 B DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 B DG 10 N2 ? ? A DC 1 B DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DG 2 N1 ? ? ? 1_555 B DC 9 N3 ? ? A DG 2 B DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DG 2 N2 ? ? ? 1_555 B DC 9 O2 ? ? A DG 2 B DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B DC 9 N4 ? ? A DG 2 B DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DA 3 N1 ? ? ? 1_555 B DT 8 N3 ? ? A DA 3 B DT 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DA 3 N6 ? ? ? 1_555 B DT 8 O4 ? ? A DA 3 B DT 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DT 4 N3 ? ? ? 1_555 B 6MA 7 N1 ? ? A DT 4 B 6MA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DT 4 O4 ? ? ? 1_555 B 6MA 7 N6 ? ? A DT 4 B 6MA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DC 5 N3 ? ? ? 1_555 B DG 6 N1 ? ? A DC 5 B DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DC 5 N4 ? ? ? 1_555 B DG 6 O6 ? ? A DC 5 B DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 5 O2 ? ? ? 1_555 B DG 6 N2 ? ? A DC 5 B DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DG 6 N1 ? ? ? 1_555 B DC 5 N3 ? ? A DG 6 B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DG 6 N2 ? ? ? 1_555 B DC 5 O2 ? ? A DG 6 B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DG 6 O6 ? ? ? 1_555 B DC 5 N4 ? ? A DG 6 B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A 6MA 7 N1 ? ? ? 1_555 B DT 4 N3 ? ? A 6MA 7 B DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A 6MA 7 N6 ? ? ? 1_555 B DT 4 O4 ? ? A 6MA 7 B DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DT 8 N3 ? ? ? 1_555 B DA 3 N1 ? ? A DT 8 B DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DT 8 O4 ? ? ? 1_555 B DA 3 N6 ? ? A DT 8 B DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DC 9 N3 ? ? ? 1_555 B DG 2 N1 ? ? A DC 9 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DC 9 N4 ? ? ? 1_555 B DG 2 O6 ? ? A DC 9 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DC 9 O2 ? ? ? 1_555 B DG 2 N2 ? ? A DC 9 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DG 10 N1 ? ? ? 1_555 B DC 1 N3 ? ? A DG 10 B DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DG 10 N2 ? ? ? 1_555 B DC 1 O2 ? ? A DG 10 B DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DG 10 O6 ? ? ? 1_555 B DC 1 N4 ? ? A DG 10 B DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OP1 ? B DG 6 ? B DG 16 ? 1_555 MG ? E MG . ? B MG 23 ? 1_555 O ? G HOH . ? B HOH 72 ? 1_555 174.8 ? 2 OP1 ? B DG 6 ? B DG 16 ? 1_555 MG ? E MG . ? B MG 23 ? 1_555 O ? G HOH . ? B HOH 73 ? 1_555 87.7 ? 3 O ? G HOH . ? B HOH 72 ? 1_555 MG ? E MG . ? B MG 23 ? 1_555 O ? G HOH . ? B HOH 73 ? 1_555 90.3 ? 4 OP1 ? B DG 6 ? B DG 16 ? 1_555 MG ? E MG . ? B MG 23 ? 1_555 O ? G HOH . ? B HOH 74 ? 1_555 95.2 ? 5 O ? G HOH . ? B HOH 72 ? 1_555 MG ? E MG . ? B MG 23 ? 1_555 O ? G HOH . ? B HOH 74 ? 1_555 86.9 ? 6 O ? G HOH . ? B HOH 73 ? 1_555 MG ? E MG . ? B MG 23 ? 1_555 O ? G HOH . ? B HOH 74 ? 1_555 177.1 ? 7 OP1 ? B DG 6 ? B DG 16 ? 1_555 MG ? E MG . ? B MG 23 ? 1_555 O ? G HOH . ? B HOH 75 ? 1_555 85.6 ? 8 O ? G HOH . ? B HOH 72 ? 1_555 MG ? E MG . ? B MG 23 ? 1_555 O ? G HOH . ? B HOH 75 ? 1_555 89.7 ? 9 O ? G HOH . ? B HOH 73 ? 1_555 MG ? E MG . ? B MG 23 ? 1_555 O ? G HOH . ? B HOH 75 ? 1_555 92.6 ? 10 O ? G HOH . ? B HOH 74 ? 1_555 MG ? E MG . ? B MG 23 ? 1_555 O ? G HOH . ? B HOH 75 ? 1_555 88.1 ? 11 OP1 ? B DG 6 ? B DG 16 ? 1_555 MG ? E MG . ? B MG 23 ? 1_555 O ? G HOH . ? B HOH 76 ? 1_555 95.0 ? 12 O ? G HOH . ? B HOH 72 ? 1_555 MG ? E MG . ? B MG 23 ? 1_555 O ? G HOH . ? B HOH 76 ? 1_555 89.9 ? 13 O ? G HOH . ? B HOH 73 ? 1_555 MG ? E MG . ? B MG 23 ? 1_555 O ? G HOH . ? B HOH 76 ? 1_555 92.2 ? 14 O ? G HOH . ? B HOH 74 ? 1_555 MG ? E MG . ? B MG 23 ? 1_555 O ? G HOH . ? B HOH 76 ? 1_555 87.1 ? 15 O ? G HOH . ? B HOH 75 ? 1_555 MG ? E MG . ? B MG 23 ? 1_555 O ? G HOH . ? B HOH 76 ? 1_555 175.2 ? 16 O ? G HOH . ? B HOH 69 ? 1_555 MG ? D MG . ? B MG 22 ? 4_555 O ? G HOH . ? B HOH 69 ? 1_555 0.0 ? 17 O ? G HOH . ? B HOH 69 ? 1_555 MG ? D MG . ? B MG 22 ? 4_555 O ? G HOH . ? B HOH 70 ? 1_555 94.9 ? 18 O ? G HOH . ? B HOH 69 ? 1_555 MG ? D MG . ? B MG 22 ? 4_555 O ? G HOH . ? B HOH 70 ? 1_555 94.9 ? 19 O ? G HOH . ? B HOH 69 ? 1_555 MG ? D MG . ? B MG 22 ? 4_555 O ? G HOH . ? B HOH 70 ? 1_555 94.9 ? 20 O ? G HOH . ? B HOH 69 ? 1_555 MG ? D MG . ? B MG 22 ? 4_555 O ? G HOH . ? B HOH 70 ? 1_555 94.9 ? 21 O ? G HOH . ? B HOH 70 ? 1_555 MG ? D MG . ? B MG 22 ? 4_555 O ? G HOH . ? B HOH 70 ? 1_555 0.0 ? 22 O ? G HOH . ? B HOH 69 ? 1_555 MG ? D MG . ? B MG 22 ? 4_555 O ? G HOH . ? B HOH 71 ? 1_555 89.1 ? 23 O ? G HOH . ? B HOH 69 ? 1_555 MG ? D MG . ? B MG 22 ? 4_555 O ? G HOH . ? B HOH 71 ? 1_555 89.1 ? 24 O ? G HOH . ? B HOH 70 ? 1_555 MG ? D MG . ? B MG 22 ? 4_555 O ? G HOH . ? B HOH 71 ? 1_555 86.3 ? 25 O ? G HOH . ? B HOH 70 ? 1_555 MG ? D MG . ? B MG 22 ? 4_555 O ? G HOH . ? B HOH 71 ? 1_555 86.3 ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B CL 21 ? 6 'BINDING SITE FOR RESIDUE CL B 21' AC2 Software B MG 22 ? 6 'BINDING SITE FOR RESIDUE MG B 22' AC3 Software B MG 23 ? 6 'BINDING SITE FOR RESIDUE MG B 23' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 DT B 8 ? DT B 18 . ? 4_555 ? 2 AC1 6 DT B 8 ? DT B 18 . ? 1_555 ? 3 AC1 6 HOH G . ? HOH B 44 . ? 1_555 ? 4 AC1 6 HOH G . ? HOH B 44 . ? 4_555 ? 5 AC1 6 HOH G . ? HOH B 51 . ? 4_555 ? 6 AC1 6 HOH G . ? HOH B 51 . ? 1_555 ? 7 AC2 6 HOH G . ? HOH B 69 . ? 4_555 ? 8 AC2 6 HOH G . ? HOH B 69 . ? 1_555 ? 9 AC2 6 HOH G . ? HOH B 70 . ? 4_555 ? 10 AC2 6 HOH G . ? HOH B 70 . ? 1_555 ? 11 AC2 6 HOH G . ? HOH B 71 . ? 1_555 ? 12 AC2 6 HOH G . ? HOH B 71 . ? 4_555 ? 13 AC3 6 DG B 6 ? DG B 16 . ? 1_555 ? 14 AC3 6 HOH G . ? HOH B 72 . ? 1_555 ? 15 AC3 6 HOH G . ? HOH B 73 . ? 1_555 ? 16 AC3 6 HOH G . ? HOH B 74 . ? 1_555 ? 17 AC3 6 HOH G . ? HOH B 75 . ? 1_555 ? 18 AC3 6 HOH G . ? HOH B 76 . ? 1_555 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O6 A DG 10 ? ? O A HOH 66 ? ? 2.11 2 1 N4 B DC 11 ? ? O B HOH 65 ? ? 2.18 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "O3'" A DG 2 ? ? "C3'" A DG 2 ? ? 1.380 1.419 -0.039 0.006 N 2 1 N1 A DA 3 ? ? C2 A DA 3 ? ? 1.416 1.339 0.077 0.009 N 3 1 C4 A DA 3 ? ? C5 A DA 3 ? ? 1.339 1.383 -0.044 0.007 N 4 1 N7 A DA 3 ? ? C8 A DA 3 ? ? 1.269 1.311 -0.042 0.007 N 5 1 "O4'" A DT 4 ? ? "C4'" A DT 4 ? ? 1.367 1.446 -0.079 0.010 N 6 1 "C5'" A DC 5 ? ? "C4'" A DC 5 ? ? 1.559 1.512 0.047 0.007 N 7 1 N1 A DC 5 ? ? C2 A DC 5 ? ? 1.483 1.397 0.086 0.010 N 8 1 C2 A DC 5 ? ? N3 A DC 5 ? ? 1.300 1.353 -0.053 0.008 N 9 1 N3 A DC 5 ? ? C4 A DC 5 ? ? 1.292 1.335 -0.043 0.007 N 10 1 C4 A DC 5 ? ? C5 A DC 5 ? ? 1.482 1.425 0.057 0.008 N 11 1 C8 A DG 6 ? ? N9 A DG 6 ? ? 1.422 1.374 0.048 0.007 N 12 1 "C3'" A DT 8 ? ? "C2'" A DT 8 ? ? 1.462 1.516 -0.054 0.008 N 13 1 "O4'" A DT 8 ? ? "C4'" A DT 8 ? ? 1.364 1.446 -0.082 0.010 N 14 1 C6 A DT 8 ? ? N1 A DT 8 ? ? 1.331 1.378 -0.047 0.007 N 15 1 "O4'" A DC 9 ? ? "C4'" A DC 9 ? ? 1.361 1.446 -0.085 0.010 N 16 1 "C5'" B DG 12 ? ? "C4'" B DG 12 ? ? 1.596 1.512 0.084 0.007 N 17 1 N3 B DG 12 ? ? C4 B DG 12 ? ? 1.444 1.350 0.094 0.007 N 18 1 C4 B DG 12 ? ? C5 B DG 12 ? ? 1.334 1.379 -0.045 0.007 N 19 1 C6 B DG 12 ? ? N1 B DG 12 ? ? 1.341 1.391 -0.050 0.007 N 20 1 C5 B DG 12 ? ? N7 B DG 12 ? ? 1.488 1.388 0.100 0.006 N 21 1 C4 B DA 13 ? ? C5 B DA 13 ? ? 1.430 1.383 0.047 0.007 N 22 1 C6 B DA 13 ? ? N1 B DA 13 ? ? 1.435 1.351 0.084 0.007 N 23 1 C5 B DA 13 ? ? N7 B DA 13 ? ? 1.337 1.388 -0.051 0.006 N 24 1 P B DC 15 ? ? OP1 B DC 15 ? ? 1.592 1.485 0.107 0.017 N 25 1 "O4'" B DC 15 ? ? "C4'" B DC 15 ? ? 1.350 1.446 -0.096 0.010 N 26 1 C4 B DC 15 ? ? N4 B DC 15 ? ? 1.397 1.335 0.062 0.009 N 27 1 C2 B DC 15 ? ? N3 B DC 15 ? ? 1.406 1.353 0.053 0.008 N 28 1 "O3'" B DC 15 ? ? P B DG 16 ? ? 1.515 1.607 -0.092 0.012 Y 29 1 "O4'" B DG 16 ? ? "C1'" B DG 16 ? ? 1.488 1.420 0.068 0.011 N 30 1 N1 B DG 16 ? ? C2 B DG 16 ? ? 1.324 1.373 -0.049 0.008 N 31 1 C2 B DG 16 ? ? N3 B DG 16 ? ? 1.392 1.323 0.069 0.008 N 32 1 C4 B DG 16 ? ? C5 B DG 16 ? ? 1.429 1.379 0.050 0.007 N 33 1 C5 B DG 16 ? ? C6 B DG 16 ? ? 1.480 1.419 0.061 0.010 N 34 1 C6 B DG 16 ? ? N1 B DG 16 ? ? 1.324 1.391 -0.067 0.007 N 35 1 N9 B DG 16 ? ? C4 B DG 16 ? ? 1.297 1.375 -0.078 0.008 N 36 1 C6 B DT 18 ? ? N1 B DT 18 ? ? 1.299 1.378 -0.079 0.007 N 37 1 "C5'" B DC 19 ? ? "C4'" B DC 19 ? ? 1.575 1.512 0.063 0.007 N 38 1 C4 B DC 19 ? ? N4 B DC 19 ? ? 1.410 1.335 0.075 0.009 N 39 1 N3 B DC 19 ? ? C4 B DC 19 ? ? 1.290 1.335 -0.045 0.007 N 40 1 "O4'" B DG 20 ? ? "C4'" B DG 20 ? ? 1.379 1.446 -0.067 0.010 N 41 1 N3 B DG 20 ? ? C4 B DG 20 ? ? 1.397 1.350 0.047 0.007 N 42 1 C4 B DG 20 ? ? C5 B DG 20 ? ? 1.304 1.379 -0.075 0.007 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C3'" A DC 1 ? ? "C2'" A DC 1 ? ? "C1'" A DC 1 ? ? 97.13 102.40 -5.27 0.80 N 2 1 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 113.66 108.30 5.36 0.30 N 3 1 N3 A DC 1 ? ? C2 A DC 1 ? ? O2 A DC 1 ? ? 117.42 121.90 -4.48 0.70 N 4 1 P A DG 2 ? ? "O5'" A DG 2 ? ? "C5'" A DG 2 ? ? 109.94 120.90 -10.96 1.60 N 5 1 "C3'" A DG 2 ? ? "O3'" A DG 2 ? ? P A DA 3 ? ? 133.42 119.70 13.72 1.20 Y 6 1 "O5'" A DA 3 ? ? P A DA 3 ? ? OP1 A DA 3 ? ? 118.40 110.70 7.70 1.20 N 7 1 P A DA 3 ? ? "O5'" A DA 3 ? ? "C5'" A DA 3 ? ? 109.93 120.90 -10.97 1.60 N 8 1 "O4'" A DA 3 ? ? "C1'" A DA 3 ? ? "C2'" A DA 3 ? ? 99.57 105.90 -6.33 0.80 N 9 1 "O4'" A DA 3 ? ? "C1'" A DA 3 ? ? N9 A DA 3 ? ? 110.31 108.30 2.01 0.30 N 10 1 N7 A DA 3 ? ? C8 A DA 3 ? ? N9 A DA 3 ? ? 109.98 113.80 -3.82 0.50 N 11 1 C8 A DA 3 ? ? N9 A DA 3 ? ? C4 A DA 3 ? ? 108.32 105.80 2.52 0.40 N 12 1 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 114.49 108.30 6.19 0.30 N 13 1 N1 A DT 4 ? ? C2 A DT 4 ? ? N3 A DT 4 ? ? 118.29 114.60 3.69 0.60 N 14 1 C2 A DT 4 ? ? N3 A DT 4 ? ? C4 A DT 4 ? ? 121.60 127.20 -5.60 0.60 N 15 1 N3 A DT 4 ? ? C2 A DT 4 ? ? O2 A DT 4 ? ? 117.99 122.30 -4.31 0.60 N 16 1 "C3'" A DT 4 ? ? "O3'" A DT 4 ? ? P A DC 5 ? ? 136.93 119.70 17.23 1.20 Y 17 1 "O5'" A DC 5 ? ? "C5'" A DC 5 ? ? "C4'" A DC 5 ? ? 101.18 109.40 -8.22 0.80 N 18 1 C6 A DC 5 ? ? N1 A DC 5 ? ? C2 A DC 5 ? ? 115.93 120.30 -4.37 0.40 N 19 1 C2 A DC 5 ? ? N3 A DC 5 ? ? C4 A DC 5 ? ? 130.53 119.90 10.63 0.50 N 20 1 N3 A DC 5 ? ? C4 A DC 5 ? ? C5 A DC 5 ? ? 115.08 121.90 -6.82 0.40 N 21 1 OP1 A DG 6 ? ? P A DG 6 ? ? OP2 A DG 6 ? ? 130.74 119.60 11.14 1.50 N 22 1 "C3'" A DG 6 ? ? "C2'" A DG 6 ? ? "C1'" A DG 6 ? ? 97.46 102.40 -4.94 0.80 N 23 1 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? "C2'" A DG 6 ? ? 98.57 105.90 -7.33 0.80 N 24 1 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 114.58 108.30 6.28 0.30 N 25 1 C6 A DG 6 ? ? N1 A DG 6 ? ? C2 A DG 6 ? ? 118.32 125.10 -6.78 0.60 N 26 1 N3 A DG 6 ? ? C4 A DG 6 ? ? C5 A DG 6 ? ? 124.18 128.60 -4.42 0.50 N 27 1 C4 A DG 6 ? ? C5 A DG 6 ? ? C6 A DG 6 ? ? 123.04 118.80 4.24 0.60 N 28 1 C4 A DG 6 ? ? C5 A DG 6 ? ? N7 A DG 6 ? ? 107.24 110.80 -3.56 0.40 N 29 1 N9 A DG 6 ? ? C4 A DG 6 ? ? C5 A DG 6 ? ? 111.03 105.40 5.63 0.40 N 30 1 N1 A DG 6 ? ? C6 A DG 6 ? ? O6 A DG 6 ? ? 115.69 119.90 -4.21 0.60 N 31 1 "O3'" A DG 6 ? ? P A 6MA 7 ? ? OP1 A 6MA 7 ? ? 89.91 105.20 -15.29 2.20 Y 32 1 "C3'" A 6MA 7 ? ? "O3'" A 6MA 7 ? ? P A DT 8 ? ? 150.99 119.70 31.29 1.20 Y 33 1 "O5'" A DT 8 ? ? "C5'" A DT 8 ? ? "C4'" A DT 8 ? ? 104.55 109.40 -4.85 0.80 N 34 1 P A DT 8 ? ? "O5'" A DT 8 ? ? "C5'" A DT 8 ? ? 110.68 120.90 -10.22 1.60 N 35 1 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 113.60 108.30 5.30 0.30 N 36 1 C2 A DT 8 ? ? N3 A DT 8 ? ? C4 A DT 8 ? ? 120.25 127.20 -6.95 0.60 N 37 1 N3 A DT 8 ? ? C2 A DT 8 ? ? O2 A DT 8 ? ? 116.47 122.30 -5.83 0.60 N 38 1 N3 A DT 8 ? ? C4 A DT 8 ? ? O4 A DT 8 ? ? 114.54 119.90 -5.36 0.60 N 39 1 "C3'" A DT 8 ? ? "O3'" A DT 8 ? ? P A DC 9 ? ? 128.45 119.70 8.75 1.20 Y 40 1 P A DC 9 ? ? "O5'" A DC 9 ? ? "C5'" A DC 9 ? ? 108.86 120.90 -12.04 1.60 N 41 1 "O4'" A DC 9 ? ? "C1'" A DC 9 ? ? N1 A DC 9 ? ? 116.84 108.30 8.54 0.30 N 42 1 C2 A DC 9 ? ? N3 A DC 9 ? ? C4 A DC 9 ? ? 125.33 119.90 5.43 0.50 N 43 1 C5 A DC 9 ? ? C6 A DC 9 ? ? N1 A DC 9 ? ? 124.79 121.00 3.79 0.50 N 44 1 N3 A DC 9 ? ? C2 A DC 9 ? ? O2 A DC 9 ? ? 126.80 121.90 4.90 0.70 N 45 1 "C3'" A DC 9 ? ? "O3'" A DC 9 ? ? P A DG 10 ? ? 111.79 119.70 -7.91 1.20 Y 46 1 P A DG 10 ? ? "O5'" A DG 10 ? ? "C5'" A DG 10 ? ? 109.29 120.90 -11.61 1.60 N 47 1 "C3'" A DG 10 ? ? "C2'" A DG 10 ? ? "C1'" A DG 10 ? ? 96.02 102.40 -6.38 0.80 N 48 1 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 112.76 108.30 4.46 0.30 N 49 1 C6 A DG 10 ? ? N1 A DG 10 ? ? C2 A DG 10 ? ? 118.99 125.10 -6.11 0.60 N 50 1 C5 A DG 10 ? ? C6 A DG 10 ? ? N1 A DG 10 ? ? 116.76 111.50 5.26 0.50 N 51 1 C4 A DG 10 ? ? C5 A DG 10 ? ? N7 A DG 10 ? ? 115.68 110.80 4.88 0.40 N 52 1 N1 A DG 10 ? ? C2 A DG 10 ? ? N2 A DG 10 ? ? 109.15 116.20 -7.05 0.90 N 53 1 N3 A DG 10 ? ? C2 A DG 10 ? ? N2 A DG 10 ? ? 124.62 119.90 4.72 0.70 N 54 1 N1 A DG 10 ? ? C6 A DG 10 ? ? O6 A DG 10 ? ? 115.44 119.90 -4.46 0.60 N 55 1 "O5'" B DC 11 ? ? "C5'" B DC 11 ? ? "C4'" B DC 11 ? ? 102.77 109.40 -6.63 0.80 N 56 1 "O4'" B DC 11 ? ? "C1'" B DC 11 ? ? N1 B DC 11 ? ? 110.75 108.30 2.45 0.30 N 57 1 "C3'" B DC 11 ? ? "O3'" B DC 11 ? ? P B DG 12 ? ? 135.22 119.70 15.52 1.20 Y 58 1 "O3'" B DC 11 ? ? P B DG 12 ? ? OP2 B DG 12 ? ? 119.07 110.50 8.57 1.10 Y 59 1 "O5'" B DG 12 ? ? "C5'" B DG 12 ? ? "C4'" B DG 12 ? ? 104.33 109.40 -5.07 0.80 N 60 1 "O4'" B DG 12 ? ? "C1'" B DG 12 ? ? N9 B DG 12 ? ? 114.78 108.30 6.48 0.30 N 61 1 N3 B DG 12 ? ? C4 B DG 12 ? ? C5 B DG 12 ? ? 123.82 128.60 -4.78 0.50 N 62 1 C4 B DG 12 ? ? C5 B DG 12 ? ? C6 B DG 12 ? ? 122.78 118.80 3.98 0.60 N 63 1 C4 B DG 12 ? ? C5 B DG 12 ? ? N7 B DG 12 ? ? 107.58 110.80 -3.22 0.40 N 64 1 N9 B DG 12 ? ? C4 B DG 12 ? ? C5 B DG 12 ? ? 109.06 105.40 3.66 0.40 N 65 1 "C3'" B DG 12 ? ? "O3'" B DG 12 ? ? P B DA 13 ? ? 145.35 119.70 25.65 1.20 Y 66 1 "O5'" B DA 13 ? ? P B DA 13 ? ? OP1 B DA 13 ? ? 98.82 105.70 -6.88 0.90 N 67 1 "O5'" B DA 13 ? ? "C5'" B DA 13 ? ? "C4'" B DA 13 ? ? 101.90 109.40 -7.50 0.80 N 68 1 C6 B DA 13 ? ? N1 B DA 13 ? ? C2 B DA 13 ? ? 122.21 118.60 3.61 0.60 N 69 1 C5 B DA 13 ? ? C6 B DA 13 ? ? N1 B DA 13 ? ? 114.48 117.70 -3.22 0.50 N 70 1 C5 B DA 13 ? ? N7 B DA 13 ? ? C8 B DA 13 ? ? 108.29 103.90 4.39 0.50 N 71 1 "O3'" B DA 13 ? ? P B DT 14 ? ? "O5'" B DT 14 ? ? 91.76 104.00 -12.24 1.90 Y 72 1 OP1 B DT 14 ? ? P B DT 14 ? ? OP2 B DT 14 ? ? 131.13 119.60 11.53 1.50 N 73 1 "O5'" B DT 14 ? ? "C5'" B DT 14 ? ? "C4'" B DT 14 ? ? 101.68 109.40 -7.72 0.80 N 74 1 P B DT 14 ? ? "O5'" B DT 14 ? ? "C5'" B DT 14 ? ? 107.07 120.90 -13.83 1.60 N 75 1 "O4'" B DT 14 ? ? "C1'" B DT 14 ? ? N1 B DT 14 ? ? 112.31 108.30 4.01 0.30 N 76 1 N3 B DT 14 ? ? C4 B DT 14 ? ? C5 B DT 14 ? ? 119.22 115.20 4.02 0.60 N 77 1 N3 B DT 14 ? ? C2 B DT 14 ? ? O2 B DT 14 ? ? 118.14 122.30 -4.16 0.60 N 78 1 N3 B DT 14 ? ? C4 B DT 14 ? ? O4 B DT 14 ? ? 115.43 119.90 -4.47 0.60 N 79 1 C4 B DT 14 ? ? C5 B DT 14 ? ? C7 B DT 14 ? ? 124.53 119.00 5.53 0.60 N 80 1 "O5'" B DC 15 ? ? "C5'" B DC 15 ? ? "C4'" B DC 15 ? ? 104.02 109.40 -5.38 0.80 N 81 1 "C3'" B DC 15 ? ? "C2'" B DC 15 ? ? "C1'" B DC 15 ? ? 97.38 102.40 -5.02 0.80 N 82 1 "O4'" B DC 15 ? ? "C1'" B DC 15 ? ? N1 B DC 15 ? ? 118.03 108.30 9.73 0.30 N 83 1 "C3'" B DC 15 ? ? "O3'" B DC 15 ? ? P B DG 16 ? ? 129.81 119.70 10.11 1.20 Y 84 1 "O5'" B DG 16 ? ? "C5'" B DG 16 ? ? "C4'" B DG 16 ? ? 104.16 109.40 -5.24 0.80 N 85 1 P B DG 16 ? ? "O5'" B DG 16 ? ? "C5'" B DG 16 ? ? 108.11 120.90 -12.79 1.60 N 86 1 N3 B DG 16 ? ? C4 B DG 16 ? ? C5 B DG 16 ? ? 125.50 128.60 -3.10 0.50 N 87 1 N1 B DG 16 ? ? C6 B DG 16 ? ? O6 B DG 16 ? ? 124.67 119.90 4.77 0.60 N 88 1 C5 B DG 16 ? ? C6 B DG 16 ? ? O6 B DG 16 ? ? 122.20 128.60 -6.40 0.60 N 89 1 "O3'" B DG 16 ? ? P B 6MA 17 ? ? OP2 B 6MA 17 ? ? 118.02 110.50 7.52 1.10 Y 90 1 "O5'" B DT 18 ? ? P B DT 18 ? ? OP1 B DT 18 ? ? 118.41 110.70 7.71 1.20 N 91 1 "O5'" B DT 18 ? ? "C5'" B DT 18 ? ? "C4'" B DT 18 ? ? 103.30 109.40 -6.10 0.80 N 92 1 "O4'" B DT 18 ? ? "C4'" B DT 18 ? ? "C3'" B DT 18 ? ? 100.67 104.50 -3.83 0.40 N 93 1 "C1'" B DT 18 ? ? "O4'" B DT 18 ? ? "C4'" B DT 18 ? ? 102.06 110.10 -8.04 1.00 N 94 1 C2 B DT 18 ? ? N3 B DT 18 ? ? C4 B DT 18 ? ? 122.23 127.20 -4.97 0.60 N 95 1 N3 B DT 18 ? ? C4 B DT 18 ? ? O4 B DT 18 ? ? 113.80 119.90 -6.10 0.60 N 96 1 "O3'" B DT 18 ? ? P B DC 19 ? ? OP2 B DC 19 ? ? 121.07 110.50 10.57 1.10 Y 97 1 "O3'" B DT 18 ? ? P B DC 19 ? ? OP1 B DC 19 ? ? 90.50 105.20 -14.70 2.20 Y 98 1 "O5'" B DC 19 ? ? "C5'" B DC 19 ? ? "C4'" B DC 19 ? ? 101.75 109.40 -7.65 0.80 N 99 1 C6 B DC 19 ? ? N1 B DC 19 ? ? C2 B DC 19 ? ? 117.24 120.30 -3.06 0.40 N 100 1 "C3'" B DC 19 ? ? "O3'" B DC 19 ? ? P B DG 20 ? ? 136.24 119.70 16.54 1.20 Y 101 1 "O3'" B DC 19 ? ? P B DG 20 ? ? OP1 B DG 20 ? ? 89.45 105.20 -15.75 2.20 Y 102 1 "O5'" B DG 20 ? ? P B DG 20 ? ? OP1 B DG 20 ? ? 127.71 110.70 17.01 1.20 N 103 1 P B DG 20 ? ? "O5'" B DG 20 ? ? "C5'" B DG 20 ? ? 103.89 120.90 -17.01 1.60 N 104 1 "O4'" B DG 20 ? ? "C1'" B DG 20 ? ? "C2'" B DG 20 ? ? 100.72 105.90 -5.18 0.80 N 105 1 "O4'" B DG 20 ? ? "C1'" B DG 20 ? ? N9 B DG 20 ? ? 114.51 108.30 6.21 0.30 N 106 1 C6 B DG 20 ? ? N1 B DG 20 ? ? C2 B DG 20 ? ? 119.85 125.10 -5.25 0.60 N 107 1 C5 B DG 20 ? ? C6 B DG 20 ? ? N1 B DG 20 ? ? 117.91 111.50 6.41 0.50 N 108 1 C4 B DG 20 ? ? C5 B DG 20 ? ? N7 B DG 20 ? ? 113.74 110.80 2.94 0.40 N 109 1 N1 B DG 20 ? ? C6 B DG 20 ? ? O6 B DG 20 ? ? 111.21 119.90 -8.69 0.60 N # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A 6MA 7 A 6MA 7 ? A ? 2 B 6MA 7 B 6MA 17 ? A ? # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 B CL 21 ? C CL . 2 1 B MG 22 ? D MG . # loop_ _refine_B_iso.class _refine_B_iso.details _refine_B_iso.treatment _refine_B_iso.pdbx_refine_id 'ALL ATOMS' TR isotropic 'X-RAY DIFFRACTION' 'ALL WATERS' TR isotropic 'X-RAY DIFFRACTION' # loop_ _refine_occupancy.class _refine_occupancy.treatment _refine_occupancy.pdbx_refine_id 'ALL ATOMS' fix 'X-RAY DIFFRACTION' 'ALL WATERS' fix 'X-RAY DIFFRACTION' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 6MA OP3 O N N 1 6MA P P N N 2 6MA OP1 O N N 3 6MA OP2 O N N 4 6MA "O5'" O N N 5 6MA "C5'" C N N 6 6MA "C4'" C N R 7 6MA "O4'" O N N 8 6MA "C3'" C N S 9 6MA "O3'" O N N 10 6MA "C2'" C N N 11 6MA "C1'" C N R 12 6MA N9 N Y N 13 6MA C8 C Y N 14 6MA N7 N Y N 15 6MA C5 C Y N 16 6MA C6 C Y N 17 6MA N1 N Y N 18 6MA C2 C Y N 19 6MA N3 N Y N 20 6MA C4 C Y N 21 6MA N6 N N N 22 6MA C1 C N N 23 6MA HOP3 H N N 24 6MA HOP2 H N N 25 6MA "H5'" H N N 26 6MA "H5''" H N N 27 6MA "H4'" H N N 28 6MA "H3'" H N N 29 6MA "HO3'" H N N 30 6MA "H2'" H N N 31 6MA "H2''" H N N 32 6MA "H1'" H N N 33 6MA H8 H N N 34 6MA H2 H N N 35 6MA H61 H N N 36 6MA H11 H N N 37 6MA H12 H N N 38 6MA H13 H N N 39 CL CL CL N N 40 DA OP3 O N N 41 DA P P N N 42 DA OP1 O N N 43 DA OP2 O N N 44 DA "O5'" O N N 45 DA "C5'" C N N 46 DA "C4'" C N R 47 DA "O4'" O N N 48 DA "C3'" C N S 49 DA "O3'" O N N 50 DA "C2'" C N N 51 DA "C1'" C N R 52 DA N9 N Y N 53 DA C8 C Y N 54 DA N7 N Y N 55 DA C5 C Y N 56 DA C6 C Y N 57 DA N6 N N N 58 DA N1 N Y N 59 DA C2 C Y N 60 DA N3 N Y N 61 DA C4 C Y N 62 DA HOP3 H N N 63 DA HOP2 H N N 64 DA "H5'" H N N 65 DA "H5''" H N N 66 DA "H4'" H N N 67 DA "H3'" H N N 68 DA "HO3'" H N N 69 DA "H2'" H N N 70 DA "H2''" H N N 71 DA "H1'" H N N 72 DA H8 H N N 73 DA H61 H N N 74 DA H62 H N N 75 DA H2 H N N 76 DC OP3 O N N 77 DC P P N N 78 DC OP1 O N N 79 DC OP2 O N N 80 DC "O5'" O N N 81 DC "C5'" C N N 82 DC "C4'" C N R 83 DC "O4'" O N N 84 DC "C3'" C N S 85 DC "O3'" O N N 86 DC "C2'" C N N 87 DC "C1'" C N R 88 DC N1 N N N 89 DC C2 C N N 90 DC O2 O N N 91 DC N3 N N N 92 DC C4 C N N 93 DC N4 N N N 94 DC C5 C N N 95 DC C6 C N N 96 DC HOP3 H N N 97 DC HOP2 H N N 98 DC "H5'" H N N 99 DC "H5''" H N N 100 DC "H4'" H N N 101 DC "H3'" H N N 102 DC "HO3'" H N N 103 DC "H2'" H N N 104 DC "H2''" H N N 105 DC "H1'" H N N 106 DC H41 H N N 107 DC H42 H N N 108 DC H5 H N N 109 DC H6 H N N 110 DG OP3 O N N 111 DG P P N N 112 DG OP1 O N N 113 DG OP2 O N N 114 DG "O5'" O N N 115 DG "C5'" C N N 116 DG "C4'" C N R 117 DG "O4'" O N N 118 DG "C3'" C N S 119 DG "O3'" O N N 120 DG "C2'" C N N 121 DG "C1'" C N R 122 DG N9 N Y N 123 DG C8 C Y N 124 DG N7 N Y N 125 DG C5 C Y N 126 DG C6 C N N 127 DG O6 O N N 128 DG N1 N N N 129 DG C2 C N N 130 DG N2 N N N 131 DG N3 N N N 132 DG C4 C Y N 133 DG HOP3 H N N 134 DG HOP2 H N N 135 DG "H5'" H N N 136 DG "H5''" H N N 137 DG "H4'" H N N 138 DG "H3'" H N N 139 DG "HO3'" H N N 140 DG "H2'" H N N 141 DG "H2''" H N N 142 DG "H1'" H N N 143 DG H8 H N N 144 DG H1 H N N 145 DG H21 H N N 146 DG H22 H N N 147 DT OP3 O N N 148 DT P P N N 149 DT OP1 O N N 150 DT OP2 O N N 151 DT "O5'" O N N 152 DT "C5'" C N N 153 DT "C4'" C N R 154 DT "O4'" O N N 155 DT "C3'" C N S 156 DT "O3'" O N N 157 DT "C2'" C N N 158 DT "C1'" C N R 159 DT N1 N N N 160 DT C2 C N N 161 DT O2 O N N 162 DT N3 N N N 163 DT C4 C N N 164 DT O4 O N N 165 DT C5 C N N 166 DT C7 C N N 167 DT C6 C N N 168 DT HOP3 H N N 169 DT HOP2 H N N 170 DT "H5'" H N N 171 DT "H5''" H N N 172 DT "H4'" H N N 173 DT "H3'" H N N 174 DT "HO3'" H N N 175 DT "H2'" H N N 176 DT "H2''" H N N 177 DT "H1'" H N N 178 DT H3 H N N 179 DT H71 H N N 180 DT H72 H N N 181 DT H73 H N N 182 DT H6 H N N 183 HOH O O N N 184 HOH H1 H N N 185 HOH H2 H N N 186 MG MG MG N N 187 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 6MA OP3 P sing N N 1 6MA OP3 HOP3 sing N N 2 6MA P OP1 doub N N 3 6MA P OP2 sing N N 4 6MA P "O5'" sing N N 5 6MA OP2 HOP2 sing N N 6 6MA "O5'" "C5'" sing N N 7 6MA "C5'" "C4'" sing N N 8 6MA "C5'" "H5'" sing N N 9 6MA "C5'" "H5''" sing N N 10 6MA "C4'" "O4'" sing N N 11 6MA "C4'" "C3'" sing N N 12 6MA "C4'" "H4'" sing N N 13 6MA "O4'" "C1'" sing N N 14 6MA "C3'" "O3'" sing N N 15 6MA "C3'" "C2'" sing N N 16 6MA "C3'" "H3'" sing N N 17 6MA "O3'" "HO3'" sing N N 18 6MA "C2'" "C1'" sing N N 19 6MA "C2'" "H2'" sing N N 20 6MA "C2'" "H2''" sing N N 21 6MA "C1'" N9 sing N N 22 6MA "C1'" "H1'" sing N N 23 6MA N9 C8 sing Y N 24 6MA N9 C4 sing Y N 25 6MA C8 N7 doub Y N 26 6MA C8 H8 sing N N 27 6MA N7 C5 sing Y N 28 6MA C5 C6 sing Y N 29 6MA C5 C4 doub Y N 30 6MA C6 N1 doub Y N 31 6MA C6 N6 sing N N 32 6MA N1 C2 sing Y N 33 6MA C2 N3 doub Y N 34 6MA C2 H2 sing N N 35 6MA N3 C4 sing Y N 36 6MA N6 C1 sing N N 37 6MA N6 H61 sing N N 38 6MA C1 H11 sing N N 39 6MA C1 H12 sing N N 40 6MA C1 H13 sing N N 41 DA OP3 P sing N N 42 DA OP3 HOP3 sing N N 43 DA P OP1 doub N N 44 DA P OP2 sing N N 45 DA P "O5'" sing N N 46 DA OP2 HOP2 sing N N 47 DA "O5'" "C5'" sing N N 48 DA "C5'" "C4'" sing N N 49 DA "C5'" "H5'" sing N N 50 DA "C5'" "H5''" sing N N 51 DA "C4'" "O4'" sing N N 52 DA "C4'" "C3'" sing N N 53 DA "C4'" "H4'" sing N N 54 DA "O4'" "C1'" sing N N 55 DA "C3'" "O3'" sing N N 56 DA "C3'" "C2'" sing N N 57 DA "C3'" "H3'" sing N N 58 DA "O3'" "HO3'" sing N N 59 DA "C2'" "C1'" sing N N 60 DA "C2'" "H2'" sing N N 61 DA "C2'" "H2''" sing N N 62 DA "C1'" N9 sing N N 63 DA "C1'" "H1'" sing N N 64 DA N9 C8 sing Y N 65 DA N9 C4 sing Y N 66 DA C8 N7 doub Y N 67 DA C8 H8 sing N N 68 DA N7 C5 sing Y N 69 DA C5 C6 sing Y N 70 DA C5 C4 doub Y N 71 DA C6 N6 sing N N 72 DA C6 N1 doub Y N 73 DA N6 H61 sing N N 74 DA N6 H62 sing N N 75 DA N1 C2 sing Y N 76 DA C2 N3 doub Y N 77 DA C2 H2 sing N N 78 DA N3 C4 sing Y N 79 DC OP3 P sing N N 80 DC OP3 HOP3 sing N N 81 DC P OP1 doub N N 82 DC P OP2 sing N N 83 DC P "O5'" sing N N 84 DC OP2 HOP2 sing N N 85 DC "O5'" "C5'" sing N N 86 DC "C5'" "C4'" sing N N 87 DC "C5'" "H5'" sing N N 88 DC "C5'" "H5''" sing N N 89 DC "C4'" "O4'" sing N N 90 DC "C4'" "C3'" sing N N 91 DC "C4'" "H4'" sing N N 92 DC "O4'" "C1'" sing N N 93 DC "C3'" "O3'" sing N N 94 DC "C3'" "C2'" sing N N 95 DC "C3'" "H3'" sing N N 96 DC "O3'" "HO3'" sing N N 97 DC "C2'" "C1'" sing N N 98 DC "C2'" "H2'" sing N N 99 DC "C2'" "H2''" sing N N 100 DC "C1'" N1 sing N N 101 DC "C1'" "H1'" sing N N 102 DC N1 C2 sing N N 103 DC N1 C6 sing N N 104 DC C2 O2 doub N N 105 DC C2 N3 sing N N 106 DC N3 C4 doub N N 107 DC C4 N4 sing N N 108 DC C4 C5 sing N N 109 DC N4 H41 sing N N 110 DC N4 H42 sing N N 111 DC C5 C6 doub N N 112 DC C5 H5 sing N N 113 DC C6 H6 sing N N 114 DG OP3 P sing N N 115 DG OP3 HOP3 sing N N 116 DG P OP1 doub N N 117 DG P OP2 sing N N 118 DG P "O5'" sing N N 119 DG OP2 HOP2 sing N N 120 DG "O5'" "C5'" sing N N 121 DG "C5'" "C4'" sing N N 122 DG "C5'" "H5'" sing N N 123 DG "C5'" "H5''" sing N N 124 DG "C4'" "O4'" sing N N 125 DG "C4'" "C3'" sing N N 126 DG "C4'" "H4'" sing N N 127 DG "O4'" "C1'" sing N N 128 DG "C3'" "O3'" sing N N 129 DG "C3'" "C2'" sing N N 130 DG "C3'" "H3'" sing N N 131 DG "O3'" "HO3'" sing N N 132 DG "C2'" "C1'" sing N N 133 DG "C2'" "H2'" sing N N 134 DG "C2'" "H2''" sing N N 135 DG "C1'" N9 sing N N 136 DG "C1'" "H1'" sing N N 137 DG N9 C8 sing Y N 138 DG N9 C4 sing Y N 139 DG C8 N7 doub Y N 140 DG C8 H8 sing N N 141 DG N7 C5 sing Y N 142 DG C5 C6 sing N N 143 DG C5 C4 doub Y N 144 DG C6 O6 doub N N 145 DG C6 N1 sing N N 146 DG N1 C2 sing N N 147 DG N1 H1 sing N N 148 DG C2 N2 sing N N 149 DG C2 N3 doub N N 150 DG N2 H21 sing N N 151 DG N2 H22 sing N N 152 DG N3 C4 sing N N 153 DT OP3 P sing N N 154 DT OP3 HOP3 sing N N 155 DT P OP1 doub N N 156 DT P OP2 sing N N 157 DT P "O5'" sing N N 158 DT OP2 HOP2 sing N N 159 DT "O5'" "C5'" sing N N 160 DT "C5'" "C4'" sing N N 161 DT "C5'" "H5'" sing N N 162 DT "C5'" "H5''" sing N N 163 DT "C4'" "O4'" sing N N 164 DT "C4'" "C3'" sing N N 165 DT "C4'" "H4'" sing N N 166 DT "O4'" "C1'" sing N N 167 DT "C3'" "O3'" sing N N 168 DT "C3'" "C2'" sing N N 169 DT "C3'" "H3'" sing N N 170 DT "O3'" "HO3'" sing N N 171 DT "C2'" "C1'" sing N N 172 DT "C2'" "H2'" sing N N 173 DT "C2'" "H2''" sing N N 174 DT "C1'" N1 sing N N 175 DT "C1'" "H1'" sing N N 176 DT N1 C2 sing N N 177 DT N1 C6 sing N N 178 DT C2 O2 doub N N 179 DT C2 N3 sing N N 180 DT N3 C4 sing N N 181 DT N3 H3 sing N N 182 DT C4 O4 doub N N 183 DT C4 C5 sing N N 184 DT C5 C7 sing N N 185 DT C5 C6 doub N N 186 DT C7 H71 sing N N 187 DT C7 H72 sing N N 188 DT C7 H73 sing N N 189 DT C6 H6 sing N N 190 HOH O H1 sing N N 191 HOH O H2 sing N N 192 # _ndb_struct_conf_na.entry_id 1DA3 _ndb_struct_conf_na.feature 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 B DG 10 1_555 0.238 -0.337 -0.349 2.207 -8.025 1.489 1 A_DC1:DG20_B A 1 ? B 20 ? 19 1 1 A DG 2 1_555 B DC 9 1_555 -0.180 -0.235 -0.068 0.332 -9.601 0.161 2 A_DG2:DC19_B A 2 ? B 19 ? 19 1 1 A DA 3 1_555 B DT 8 1_555 0.109 -0.074 0.035 -1.146 -16.200 1.077 3 A_DA3:DT18_B A 3 ? B 18 ? 20 1 1 A DT 4 1_555 B 6MA 7 1_555 -0.186 -0.095 -0.178 1.036 -9.334 -3.713 4 A_DT4:6MA17_B A 4 ? B 17 ? 20 1 1 A DC 5 1_555 B DG 6 1_555 0.157 -0.089 -0.134 2.418 -8.413 -3.126 5 A_DC5:DG16_B A 5 ? B 16 ? 19 1 1 A DG 6 1_555 B DC 5 1_555 -0.242 -0.594 0.251 6.688 -4.805 -2.795 6 A_DG6:DC15_B A 6 ? B 15 ? 19 1 1 A 6MA 7 1_555 B DT 4 1_555 0.263 -0.357 -0.019 0.808 -11.455 -0.082 7 A_6MA7:DT14_B A 7 ? B 14 ? 20 1 1 A DT 8 1_555 B DA 3 1_555 0.259 -0.484 -0.036 3.802 -9.822 -4.642 8 A_DT8:DA13_B A 8 ? B 13 ? 20 1 1 A DC 9 1_555 B DG 2 1_555 0.469 -0.253 -0.158 5.492 -10.718 -0.837 9 A_DC9:DG12_B A 9 ? B 12 ? 19 1 1 A DG 10 1_555 B DC 1 1_555 -0.103 -0.202 0.106 6.575 -5.057 -2.117 10 A_DG10:DC11_B A 10 ? B 11 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 B DG 10 1_555 A DG 2 1_555 B DC 9 1_555 -0.779 0.601 3.457 -5.107 3.857 35.901 0.382 0.479 3.574 6.197 8.205 36.448 1 AA_DC1DG2:DC19DG20_BB A 1 ? B 20 ? A 2 ? B 19 ? 1 A DG 2 1_555 B DC 9 1_555 A DA 3 1_555 B DT 8 1_555 0.715 -0.611 3.323 1.019 6.780 31.755 -2.283 -1.100 3.150 12.213 -1.835 32.468 2 AA_DG2DA3:DT18DC19_BB A 2 ? B 19 ? A 3 ? B 18 ? 1 A DA 3 1_555 B DT 8 1_555 A DT 4 1_555 B 6MA 7 1_555 -0.765 -0.644 3.261 1.065 4.182 30.171 -2.042 1.664 3.117 7.983 -2.033 30.471 3 AA_DA3DT4:6MA17DT18_BB A 3 ? B 18 ? A 4 ? B 17 ? 1 A DT 4 1_555 B 6MA 7 1_555 A DC 5 1_555 B DG 6 1_555 0.359 -0.149 3.350 -0.116 0.125 36.472 -0.256 -0.590 3.349 0.200 0.185 36.472 4 AA_DT4DC5:DG166MA17_BB A 4 ? B 17 ? A 5 ? B 16 ? 1 A DC 5 1_555 B DG 6 1_555 A DG 6 1_555 B DC 5 1_555 1.096 0.546 3.286 1.999 1.704 33.076 0.666 -1.577 3.368 2.988 -3.505 33.178 5 AA_DC5DG6:DC15DG16_BB A 5 ? B 16 ? A 6 ? B 15 ? 1 A DG 6 1_555 B DC 5 1_555 A 6MA 7 1_555 B DT 4 1_555 -0.696 0.125 3.489 -0.134 8.427 35.302 -1.066 1.099 3.430 13.656 0.217 36.263 6 AA_DG66MA7:DT14DC15_BB A 6 ? B 15 ? A 7 ? B 14 ? 1 A 6MA 7 1_555 B DT 4 1_555 A DT 8 1_555 B DA 3 1_555 -0.008 -0.253 3.275 -0.482 -3.322 32.803 0.122 -0.068 3.284 -5.863 0.850 32.970 7 AA_6MA7DT8:DA13DT14_BB A 7 ? B 14 ? A 8 ? B 13 ? 1 A DT 8 1_555 B DA 3 1_555 A DC 9 1_555 B DG 2 1_555 0.228 -0.182 3.263 3.585 6.744 34.755 -1.279 0.147 3.181 11.124 -5.914 35.559 8 AA_DT8DC9:DG12DA13_BB A 8 ? B 13 ? A 9 ? B 12 ? 1 A DC 9 1_555 B DG 2 1_555 A DG 10 1_555 B DC 1 1_555 -0.402 0.548 3.304 -2.311 9.135 32.055 -0.619 0.301 3.350 16.113 4.076 33.377 9 AA_DC9DG10:DC11DG12_BB A 9 ? B 12 ? A 10 ? B 11 ? # _atom_sites.entry_id 1DA3 _atom_sites.fract_transf_matrix[1][1] 0.029960 _atom_sites.fract_transf_matrix[1][2] 0.017297 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.034595 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010173 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL MG N O P # loop_