data_1DZE # _entry.id 1DZE # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.382 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1DZE pdb_00001dze 10.2210/pdb1dze/pdb PDBE EBI-4664 ? ? WWPDB D_1290004664 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 1C3W unspecified ;BACTERIORHODOPSIN/LIPID COMPLEX AT 1.55 A RESOLUTION (GROUND STATE WILD TYPE "BR") ; PDB 1BRD unspecified 'BACTERIORHODOPSIN, HALOBACTERIUM HALOBIUM, ELECTRON DIFFRACTION' PDB 2BRD unspecified 'CRYSTAL STRUCTURE OF BACTERIORHODOPSIN IN PURPLE MEMBRANE' PDB 1BRR unspecified 'X-RAY STRUCTURE OF THE BACTERIORHODOPSIN TRIMER/LIPID COMPLEX' PDB 1BAC unspecified 'RHODOPSIN (7-HELIX BUNDLE) COMPLEX WITH ALL-TRANS RETINAL (THEORETICAL MODEL)' PDB 1BAD unspecified 'BACTERIORHODOPSIN (7-HELIX BUNDLE) WITH 13-CIS RETINAL (THEORETICAL MODEL)' PDB 1BHA unspecified 'BACTERIORHODOPSIN (PROTEOLYTIC FRAGMENT 1 - 71, SOLUBILIZED IN SDS MICELLES) (NMR, 12 STRUCTURES)' PDB 1BHB unspecified 'BACTERIORHODOPSIN (PROTEOLYTIC FRAGMENT 1 - 71, SOLUBILIZED IN METHANOL-CHLOROFORM) (NMR, 12 STRUCTURES)' PDB 1BCT unspecified 'BACTERIORHODOPSIN (FRAGMENT 163-231) (NMR, 14 STRUCTURES)' PDB 1AP9 unspecified 'X-RAY STRUCTURE OF BACTERIORHODOPSIN FROM MICROCRYSTALS GROWN IN LIPIDIC CUBIC PHASES' PDB 1AT9 unspecified 'STRUCTURE OF BACTERIORHODOPSIN AT 3.0 ANGSTROM DETERMINED BY ELECTRON CRYSTALLOGRAPHY' PDB 1QM8 unspecified 'STRUCTURE OF BACTERIORHODOPSIN AT 100 K' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1DZE _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2000-02-25 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Takeda, K.' 1 'Matsui, Y.' 2 'Sato, H.' 3 'Hino, T.' 4 'Kanamori, E.' 5 'Okumura, H.' 6 'Yamane, T.' 7 'Iizuka, T.' 8 'Kamiya, N.' 9 'Adachi, S.' 10 'Kouyama, T.' 11 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary ;Crystal Structure of the M Intermediate of Bacteriorhodopsin: Allosteric Structural Changes Mediated by Sliding Movement of a Transmembrane Helix ; J.Mol.Biol. 341 1023 ? 2004 JMOBAK UK 0022-2836 0070 ? 15328615 10.1016/J.JMB.2004.06.080 1 'Specific Lipid-Protein Interactions in a Novel Honeycomb Lattice Structure of Bacteriorhodopsin' 'Acta Crystallogr.,Sect.D' D55 1251 ? 1999 ABCRE6 DK 0907-4449 0766 ? 10393291 10.1107/S090744499900503X # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Takeda, K.' 1 ? primary 'Matsui, Y.' 2 ? primary 'Kamiya, N.' 3 ? primary 'Adachi, S.' 4 ? primary 'Okumura, H.' 5 ? primary 'Kouyama, T.' 6 ? 1 'Sato, H.' 7 ? 1 'Takeda, K.' 8 ? 1 'Tani, K.' 9 ? 1 'Hino, T.' 10 ? 1 'Okada, T.' 11 ? 1 'Nakasako, M.' 12 ? 1 'Kamiya, N.' 13 ? 1 'Kouyama, T.' 14 ? # _cell.entry_id 1DZE _cell.length_a 102.400 _cell.length_b 102.400 _cell.length_c 112.300 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1DZE _symmetry.space_group_name_H-M 'P 6 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 177 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'BACTERIORHODOPSIN (M INTERMEDIATE)' 26814.412 1 ? ? ? '5 LIPIDS AND 18 WATER MOLECULES' 2 branched man 'beta-D-galactopyranose-(1-6)-alpha-D-mannopyranose-(1-2)-alpha-D-glucopyranose' 504.438 1 ? ? ? ? 3 non-polymer syn RETINAL 284.436 1 ? ? ? ? 4 non-polymer syn '3-PHOSPHORYL-[1,2-DI-PHYTANYL]GLYCEROL' 733.137 1 ? ? ? ? 5 non-polymer syn 2,3-DI-PHYTANYL-GLYCEROL 653.157 2 ? ? ? ? 6 non-polymer syn "2,3-DI-O-PHYTANLY-3-SN-GLYCERO-1-PHOSPHORYL-3'-SN-GLYCEROL-1'-PHOSPHATE" 885.179 1 ? ? ? ? 7 non-polymer syn '3-[GLYCEROLYLPHOSPHONYL]-[1,2-DI-PHYTANYL]GLYCEROL' 807.215 1 ? ? ? ? 8 water nat water 18.015 18 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;QAQITGRPEWIWLALGTALMGLGTLYFLVKGMGVSDPDAKKFYAITTLVPAIAFTMYLSMLLGYGLTMVPFGGEQNPIYW ARYADWLFTTPLLLLDLALLVDADQGTILALVGADGIMIGTGLVGALTKVYSYRFVWWAISTAAMLYILYVLFFGFTSKA ESMRPEVASTFKVLRNVTVVLWSAYPVVWLIGSEGAGIVPLNIETLLFMVLDVSAKVGFGLILLRSRAIFGEAEAPEPSA GDGAAATS ; _entity_poly.pdbx_seq_one_letter_code_can ;QAQITGRPEWIWLALGTALMGLGTLYFLVKGMGVSDPDAKKFYAITTLVPAIAFTMYLSMLLGYGLTMVPFGGEQNPIYW ARYADWLFTTPLLLLDLALLVDADQGTILALVGADGIMIGTGLVGALTKVYSYRFVWWAISTAAMLYILYVLFFGFTSKA ESMRPEVASTFKVLRNVTVVLWSAYPVVWLIGSEGAGIVPLNIETLLFMVLDVSAKVGFGLILLRSRAIFGEAEAPEPSA GDGAAATS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLN n 1 2 ALA n 1 3 GLN n 1 4 ILE n 1 5 THR n 1 6 GLY n 1 7 ARG n 1 8 PRO n 1 9 GLU n 1 10 TRP n 1 11 ILE n 1 12 TRP n 1 13 LEU n 1 14 ALA n 1 15 LEU n 1 16 GLY n 1 17 THR n 1 18 ALA n 1 19 LEU n 1 20 MET n 1 21 GLY n 1 22 LEU n 1 23 GLY n 1 24 THR n 1 25 LEU n 1 26 TYR n 1 27 PHE n 1 28 LEU n 1 29 VAL n 1 30 LYS n 1 31 GLY n 1 32 MET n 1 33 GLY n 1 34 VAL n 1 35 SER n 1 36 ASP n 1 37 PRO n 1 38 ASP n 1 39 ALA n 1 40 LYS n 1 41 LYS n 1 42 PHE n 1 43 TYR n 1 44 ALA n 1 45 ILE n 1 46 THR n 1 47 THR n 1 48 LEU n 1 49 VAL n 1 50 PRO n 1 51 ALA n 1 52 ILE n 1 53 ALA n 1 54 PHE n 1 55 THR n 1 56 MET n 1 57 TYR n 1 58 LEU n 1 59 SER n 1 60 MET n 1 61 LEU n 1 62 LEU n 1 63 GLY n 1 64 TYR n 1 65 GLY n 1 66 LEU n 1 67 THR n 1 68 MET n 1 69 VAL n 1 70 PRO n 1 71 PHE n 1 72 GLY n 1 73 GLY n 1 74 GLU n 1 75 GLN n 1 76 ASN n 1 77 PRO n 1 78 ILE n 1 79 TYR n 1 80 TRP n 1 81 ALA n 1 82 ARG n 1 83 TYR n 1 84 ALA n 1 85 ASP n 1 86 TRP n 1 87 LEU n 1 88 PHE n 1 89 THR n 1 90 THR n 1 91 PRO n 1 92 LEU n 1 93 LEU n 1 94 LEU n 1 95 LEU n 1 96 ASP n 1 97 LEU n 1 98 ALA n 1 99 LEU n 1 100 LEU n 1 101 VAL n 1 102 ASP n 1 103 ALA n 1 104 ASP n 1 105 GLN n 1 106 GLY n 1 107 THR n 1 108 ILE n 1 109 LEU n 1 110 ALA n 1 111 LEU n 1 112 VAL n 1 113 GLY n 1 114 ALA n 1 115 ASP n 1 116 GLY n 1 117 ILE n 1 118 MET n 1 119 ILE n 1 120 GLY n 1 121 THR n 1 122 GLY n 1 123 LEU n 1 124 VAL n 1 125 GLY n 1 126 ALA n 1 127 LEU n 1 128 THR n 1 129 LYS n 1 130 VAL n 1 131 TYR n 1 132 SER n 1 133 TYR n 1 134 ARG n 1 135 PHE n 1 136 VAL n 1 137 TRP n 1 138 TRP n 1 139 ALA n 1 140 ILE n 1 141 SER n 1 142 THR n 1 143 ALA n 1 144 ALA n 1 145 MET n 1 146 LEU n 1 147 TYR n 1 148 ILE n 1 149 LEU n 1 150 TYR n 1 151 VAL n 1 152 LEU n 1 153 PHE n 1 154 PHE n 1 155 GLY n 1 156 PHE n 1 157 THR n 1 158 SER n 1 159 LYS n 1 160 ALA n 1 161 GLU n 1 162 SER n 1 163 MET n 1 164 ARG n 1 165 PRO n 1 166 GLU n 1 167 VAL n 1 168 ALA n 1 169 SER n 1 170 THR n 1 171 PHE n 1 172 LYS n 1 173 VAL n 1 174 LEU n 1 175 ARG n 1 176 ASN n 1 177 VAL n 1 178 THR n 1 179 VAL n 1 180 VAL n 1 181 LEU n 1 182 TRP n 1 183 SER n 1 184 ALA n 1 185 TYR n 1 186 PRO n 1 187 VAL n 1 188 VAL n 1 189 TRP n 1 190 LEU n 1 191 ILE n 1 192 GLY n 1 193 SER n 1 194 GLU n 1 195 GLY n 1 196 ALA n 1 197 GLY n 1 198 ILE n 1 199 VAL n 1 200 PRO n 1 201 LEU n 1 202 ASN n 1 203 ILE n 1 204 GLU n 1 205 THR n 1 206 LEU n 1 207 LEU n 1 208 PHE n 1 209 MET n 1 210 VAL n 1 211 LEU n 1 212 ASP n 1 213 VAL n 1 214 SER n 1 215 ALA n 1 216 LYS n 1 217 VAL n 1 218 GLY n 1 219 PHE n 1 220 GLY n 1 221 LEU n 1 222 ILE n 1 223 LEU n 1 224 LEU n 1 225 ARG n 1 226 SER n 1 227 ARG n 1 228 ALA n 1 229 ILE n 1 230 PHE n 1 231 GLY n 1 232 GLU n 1 233 ALA n 1 234 GLU n 1 235 ALA n 1 236 PRO n 1 237 GLU n 1 238 PRO n 1 239 SER n 1 240 ALA n 1 241 GLY n 1 242 ASP n 1 243 GLY n 1 244 ALA n 1 245 ALA n 1 246 ALA n 1 247 THR n 1 248 SER n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'HALOBACTERIUM SALINARIUM' _entity_src_nat.pdbx_ncbi_taxonomy_id 2242 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain JW3 _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location 'CELL MEMBRANE' _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details 'HALOBACTERIUM SALINARIUM' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code BACR_HALHA _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession P02945 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1DZE _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 248 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P02945 _struct_ref_seq.db_align_beg 14 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 261 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 248 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GAL 'D-saccharide, beta linking' . beta-D-galactopyranose 'beta-D-galactose; D-galactose; galactose' 'C6 H12 O6' 180.156 GLC 'D-saccharide, alpha linking' . alpha-D-glucopyranose 'alpha-D-glucose; D-glucose; glucose' 'C6 H12 O6' 180.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 L1P non-polymer . '3-PHOSPHORYL-[1,2-DI-PHYTANYL]GLYCEROL' '1,2-DI-1-(3,7,11,15-TETRAMETHYL-HEXADECANE)-SN-GLYCERO-3-PHOSPHATE' 'C43 H89 O6 P' 733.137 L2P non-polymer . 2,3-DI-PHYTANYL-GLYCEROL '1,2-DI-1-(3,7,11,15-TETRAMETHYL-HEXADECANE)-SN-GLYCEROL' 'C43 H88 O3' 653.157 L3P non-polymer . "2,3-DI-O-PHYTANLY-3-SN-GLYCERO-1-PHOSPHORYL-3'-SN-GLYCEROL-1'-PHOSPHATE" ? 'C46 H94 O11 P2 -2' 885.179 L4P non-polymer . '3-[GLYCEROLYLPHOSPHONYL]-[1,2-DI-PHYTANYL]GLYCEROL' "2,3-DI-O-PHYTANLY-3-SN-GLYCERO-1-PHOSPHORYL-3'-SN-GLYCEROL" 'C46 H95 O8 P' 807.215 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MAN 'D-saccharide, alpha linking' . alpha-D-mannopyranose 'alpha-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 RET non-polymer . RETINAL ? 'C20 H28 O' 284.436 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1DZE _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.17 _exptl_crystal.density_percent_sol 61.19 _exptl_crystal.description 'DATA WERE COLLECTED USING THE OSCILLATION METHOD' # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.20 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;THE CRYSTALLIZATION CONSISTS OF TWO STEPS. FIRST, A MIXTURE OF 5 MG/ML PURPLE MEMBRANE, 0.25% OTG, 1 M AMMONIUM SULFATE, 0.16 M NACL, 0.04 M SODIUM CITRATE (PH5.2) , 0.04% NAN3 WAS INCUBATED AND 15% TREHALOSE AT 305K FOR 5 DAYS. THIS RESULTED IN THE FORMATION OF SPHERICAL VESICLES WITH A DIAMETER OF 50 NM. AFTER SEDIMENTAL MATERIALS WERE REMOVED BY CENTRIFUGATION (4000G X 10 MIN), A SUSPENSION OF THE SPHERICAL VESICLES WAS COOLED TO 278K AND CONCENTRATED BY VAPOR DIFFUSION AGAINST A RESERVOIR SOLUTION CONTAINING 2.0 M AMMONIUM SULFATE 0.08M SODIUM CITRATE (PH 5.2) AND 30% TREHALOSE. INCUBATION FOR A COUPLE OF MONTHS YIELDED HEXAGONAL CRYSTALS. ; # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU IMAGE PLATE' _diffrn_detector.pdbx_collection_date 1998-11-18 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SI(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.70 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SPRING-8 BEAMLINE BL44B2' _diffrn_source.pdbx_synchrotron_site SPring-8 _diffrn_source.pdbx_synchrotron_beamline BL44B2 _diffrn_source.pdbx_wavelength 0.70 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 1DZE _reflns.observed_criterion_sigma_I 0.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.000 _reflns.d_resolution_high 2.500 _reflns.number_obs 11480 _reflns.number_all ? _reflns.percent_possible_obs 91.7 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.06900 _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 14.400 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.50 _reflns_shell.d_res_low 2.59 _reflns_shell.percent_possible_all 55.2 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.30400 _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 1DZE _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 11017 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 8 _refine.ls_d_res_high 2.5 _refine.ls_percent_reflns_obs 90.8 _refine.ls_R_factor_obs 0.257 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.257 _refine.ls_R_factor_R_free 0.283 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 561 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 36.0 _refine.aniso_B[1][1] -19.7 _refine.aniso_B[2][2] -19.7 _refine.aniso_B[3][3] 13.4 _refine.aniso_B[1][2] -9.8 _refine.aniso_B[1][3] 0 _refine.aniso_B[2][3] 0 _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'THE C-TERMINAL RESIDUES WERE NOT SEEN IN THE DENSITY MAPS' _refine.pdbx_starting_model 'PDB ENTRY 1QM8' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1739 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 247 _refine_hist.number_atoms_solvent 18 _refine_hist.number_atoms_total 2004 _refine_hist.d_res_high 2.5 _refine_hist.d_res_low 8 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.006 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.22 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d 20.1 ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d 1.22 ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 8 _refine_ls_shell.d_res_high 2.50 _refine_ls_shell.d_res_low 2.61 _refine_ls_shell.number_reflns_R_work 756 _refine_ls_shell.R_factor_R_work 0.371 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.437 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free 5 _refine_ls_shell.number_reflns_R_free 41 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.pdbx_refine_id _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file 'X-RAY DIFFRACTION' 1 PARHCSDX.PRO TOPHCSDX.PRO 'X-RAY DIFFRACTION' 2 RET_CIS.PAR RET_CIS.TOP 'X-RAY DIFFRACTION' 3 DPG.PAR DPG.TOP 'X-RAY DIFFRACTION' 4 GLC.PAR GLC.TOP # _struct.entry_id 1DZE _struct.title 'Structure of the M Intermediate of Bacteriorhodopsin trapped at 100K' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1DZE _struct_keywords.pdbx_keywords BACTERIORHODOPSIN _struct_keywords.text ;BACTERIORHODOPSIN, PROTON PUMP, MEMBRANE PROTEIN, RETINAL PROTEIN, PHOTORECEPTOR, REACTION INTERMEDIATE, HALOBACTERIA, ION PUMP, HELIX, SLIDING ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 7 ? H N N 5 ? I N N 8 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU A 9 ? MET A 32 ? GLU A 9 MET A 32 1 ? 24 HELX_P HELX_P2 2 ASP A 38 ? LEU A 62 ? ASP A 38 LEU A 62 1 ? 25 HELX_P HELX_P3 3 TRP A 80 ? ASP A 102 ? TRP A 80 ASP A 102 1 ? 23 HELX_P HELX_P4 4 ASP A 104 ? THR A 128 ? ASP A 104 THR A 128 1 ? 25 HELX_P HELX_P5 5 TYR A 133 ? PHE A 154 ? TYR A 133 PHE A 154 1 ? 22 HELX_P HELX_P6 6 GLY A 155 ? SER A 162 ? GLY A 155 SER A 162 1 ? 8 HELX_P HELX_P7 7 ARG A 164 ? SER A 183 ? ARG A 164 SER A 183 1 ? 20 HELX_P HELX_P8 8 ALA A 184 ? GLY A 192 ? ALA A 184 GLY A 192 1 ? 9 HELX_P HELX_P9 9 PRO A 200 ? ARG A 225 ? PRO A 200 ARG A 225 1 ? 26 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale one ? A LYS 216 NZ ? ? ? 1_555 C RET . C15 ? ? A LYS 216 A RET 250 1_555 ? ? ? ? ? ? ? 1.343 ? ? covale2 covale one ? E L2P . O3 ? ? ? 1_555 B GLC . C1 ? ? A L2P 270 B GLC 1 1_555 ? ? ? ? ? ? ? 1.430 ? ? covale3 covale both ? B GLC . O2 ? ? ? 1_555 B MAN . C1 ? ? B GLC 1 B MAN 2 1_555 ? ? ? ? ? ? ? 1.424 ? ? covale4 covale both ? B MAN . O6 ? ? ? 1_555 B GAL . C1 ? ? B MAN 2 B GAL 3 1_555 ? ? ? ? ? ? ? 1.445 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id A _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 66 ? PRO A 70 ? LEU A 66 PRO A 70 A 2 GLN A 75 ? TYR A 79 ? GLN A 75 TYR A 79 # _pdbx_struct_sheet_hbond.sheet_id A _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id O _pdbx_struct_sheet_hbond.range_1_label_comp_id THR _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 67 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id O _pdbx_struct_sheet_hbond.range_1_auth_comp_id THR _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 67 _pdbx_struct_sheet_hbond.range_2_label_atom_id N _pdbx_struct_sheet_hbond.range_2_label_comp_id ILE _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 78 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id N _pdbx_struct_sheet_hbond.range_2_auth_comp_id ILE _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 78 # _database_PDB_matrix.entry_id 1DZE _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1DZE _atom_sites.fract_transf_matrix[1][1] 0.009766 _atom_sites.fract_transf_matrix[1][2] 0.005638 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011276 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008905 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLN 1 1 ? ? ? A . n A 1 2 ALA 2 2 ? ? ? A . n A 1 3 GLN 3 3 ? ? ? A . n A 1 4 ILE 4 4 ? ? ? A . n A 1 5 THR 5 5 ? ? ? A . n A 1 6 GLY 6 6 6 GLY GLY A . n A 1 7 ARG 7 7 7 ARG ARG A . n A 1 8 PRO 8 8 8 PRO PRO A . n A 1 9 GLU 9 9 9 GLU GLU A . n A 1 10 TRP 10 10 10 TRP TRP A . n A 1 11 ILE 11 11 11 ILE ILE A . n A 1 12 TRP 12 12 12 TRP TRP A . n A 1 13 LEU 13 13 13 LEU LEU A . n A 1 14 ALA 14 14 14 ALA ALA A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 THR 17 17 17 THR THR A . n A 1 18 ALA 18 18 18 ALA ALA A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 MET 20 20 20 MET MET A . n A 1 21 GLY 21 21 21 GLY GLY A . n A 1 22 LEU 22 22 22 LEU LEU A . n A 1 23 GLY 23 23 23 GLY GLY A . n A 1 24 THR 24 24 24 THR THR A . n A 1 25 LEU 25 25 25 LEU LEU A . n A 1 26 TYR 26 26 26 TYR TYR A . n A 1 27 PHE 27 27 27 PHE PHE A . n A 1 28 LEU 28 28 28 LEU LEU A . n A 1 29 VAL 29 29 29 VAL VAL A . n A 1 30 LYS 30 30 30 LYS LYS A . n A 1 31 GLY 31 31 31 GLY GLY A . n A 1 32 MET 32 32 32 MET MET A . n A 1 33 GLY 33 33 33 GLY GLY A . n A 1 34 VAL 34 34 34 VAL VAL A . n A 1 35 SER 35 35 35 SER SER A . n A 1 36 ASP 36 36 36 ASP ASP A . n A 1 37 PRO 37 37 37 PRO PRO A . n A 1 38 ASP 38 38 38 ASP ASP A . n A 1 39 ALA 39 39 39 ALA ALA A . n A 1 40 LYS 40 40 40 LYS LYS A . n A 1 41 LYS 41 41 41 LYS LYS A . n A 1 42 PHE 42 42 42 PHE PHE A . n A 1 43 TYR 43 43 43 TYR TYR A . n A 1 44 ALA 44 44 44 ALA ALA A . n A 1 45 ILE 45 45 45 ILE ILE A . n A 1 46 THR 46 46 46 THR THR A . n A 1 47 THR 47 47 47 THR THR A . n A 1 48 LEU 48 48 48 LEU LEU A . n A 1 49 VAL 49 49 49 VAL VAL A . n A 1 50 PRO 50 50 50 PRO PRO A . n A 1 51 ALA 51 51 51 ALA ALA A . n A 1 52 ILE 52 52 52 ILE ILE A . n A 1 53 ALA 53 53 53 ALA ALA A . n A 1 54 PHE 54 54 54 PHE PHE A . n A 1 55 THR 55 55 55 THR THR A . n A 1 56 MET 56 56 56 MET MET A . n A 1 57 TYR 57 57 57 TYR TYR A . n A 1 58 LEU 58 58 58 LEU LEU A . n A 1 59 SER 59 59 59 SER SER A . n A 1 60 MET 60 60 60 MET MET A . n A 1 61 LEU 61 61 61 LEU LEU A . n A 1 62 LEU 62 62 62 LEU LEU A . n A 1 63 GLY 63 63 63 GLY GLY A . n A 1 64 TYR 64 64 64 TYR TYR A . n A 1 65 GLY 65 65 65 GLY GLY A . n A 1 66 LEU 66 66 66 LEU LEU A . n A 1 67 THR 67 67 67 THR THR A . n A 1 68 MET 68 68 68 MET MET A . n A 1 69 VAL 69 69 69 VAL VAL A . n A 1 70 PRO 70 70 70 PRO PRO A . n A 1 71 PHE 71 71 71 PHE PHE A . n A 1 72 GLY 72 72 72 GLY GLY A . n A 1 73 GLY 73 73 73 GLY GLY A . n A 1 74 GLU 74 74 74 GLU GLU A . n A 1 75 GLN 75 75 75 GLN GLN A . n A 1 76 ASN 76 76 76 ASN ASN A . n A 1 77 PRO 77 77 77 PRO PRO A . n A 1 78 ILE 78 78 78 ILE ILE A . n A 1 79 TYR 79 79 79 TYR TYR A . n A 1 80 TRP 80 80 80 TRP TRP A . n A 1 81 ALA 81 81 81 ALA ALA A . n A 1 82 ARG 82 82 82 ARG ARG A . n A 1 83 TYR 83 83 83 TYR TYR A . n A 1 84 ALA 84 84 84 ALA ALA A . n A 1 85 ASP 85 85 85 ASP ASP A . n A 1 86 TRP 86 86 86 TRP TRP A . n A 1 87 LEU 87 87 87 LEU LEU A . n A 1 88 PHE 88 88 88 PHE PHE A . n A 1 89 THR 89 89 89 THR THR A . n A 1 90 THR 90 90 90 THR THR A . n A 1 91 PRO 91 91 91 PRO PRO A . n A 1 92 LEU 92 92 92 LEU LEU A . n A 1 93 LEU 93 93 93 LEU LEU A . n A 1 94 LEU 94 94 94 LEU LEU A . n A 1 95 LEU 95 95 95 LEU LEU A . n A 1 96 ASP 96 96 96 ASP ASP A . n A 1 97 LEU 97 97 97 LEU LEU A . n A 1 98 ALA 98 98 98 ALA ALA A . n A 1 99 LEU 99 99 99 LEU LEU A . n A 1 100 LEU 100 100 100 LEU LEU A . n A 1 101 VAL 101 101 101 VAL VAL A . n A 1 102 ASP 102 102 102 ASP ASP A . n A 1 103 ALA 103 103 103 ALA ALA A . n A 1 104 ASP 104 104 104 ASP ASP A . n A 1 105 GLN 105 105 105 GLN GLN A . n A 1 106 GLY 106 106 106 GLY GLY A . n A 1 107 THR 107 107 107 THR THR A . n A 1 108 ILE 108 108 108 ILE ILE A . n A 1 109 LEU 109 109 109 LEU LEU A . n A 1 110 ALA 110 110 110 ALA ALA A . n A 1 111 LEU 111 111 111 LEU LEU A . n A 1 112 VAL 112 112 112 VAL VAL A . n A 1 113 GLY 113 113 113 GLY GLY A . n A 1 114 ALA 114 114 114 ALA ALA A . n A 1 115 ASP 115 115 115 ASP ASP A . n A 1 116 GLY 116 116 116 GLY GLY A . n A 1 117 ILE 117 117 117 ILE ILE A . n A 1 118 MET 118 118 118 MET MET A . n A 1 119 ILE 119 119 119 ILE ILE A . n A 1 120 GLY 120 120 120 GLY GLY A . n A 1 121 THR 121 121 121 THR THR A . n A 1 122 GLY 122 122 122 GLY GLY A . n A 1 123 LEU 123 123 123 LEU LEU A . n A 1 124 VAL 124 124 124 VAL VAL A . n A 1 125 GLY 125 125 125 GLY GLY A . n A 1 126 ALA 126 126 126 ALA ALA A . n A 1 127 LEU 127 127 127 LEU LEU A . n A 1 128 THR 128 128 128 THR THR A . n A 1 129 LYS 129 129 129 LYS LYS A . n A 1 130 VAL 130 130 130 VAL VAL A . n A 1 131 TYR 131 131 131 TYR TYR A . n A 1 132 SER 132 132 132 SER SER A . n A 1 133 TYR 133 133 133 TYR TYR A . n A 1 134 ARG 134 134 134 ARG ARG A . n A 1 135 PHE 135 135 135 PHE PHE A . n A 1 136 VAL 136 136 136 VAL VAL A . n A 1 137 TRP 137 137 137 TRP TRP A . n A 1 138 TRP 138 138 138 TRP TRP A . n A 1 139 ALA 139 139 139 ALA ALA A . n A 1 140 ILE 140 140 140 ILE ILE A . n A 1 141 SER 141 141 141 SER SER A . n A 1 142 THR 142 142 142 THR THR A . n A 1 143 ALA 143 143 143 ALA ALA A . n A 1 144 ALA 144 144 144 ALA ALA A . n A 1 145 MET 145 145 145 MET MET A . n A 1 146 LEU 146 146 146 LEU LEU A . n A 1 147 TYR 147 147 147 TYR TYR A . n A 1 148 ILE 148 148 148 ILE ILE A . n A 1 149 LEU 149 149 149 LEU LEU A . n A 1 150 TYR 150 150 150 TYR TYR A . n A 1 151 VAL 151 151 151 VAL VAL A . n A 1 152 LEU 152 152 152 LEU LEU A . n A 1 153 PHE 153 153 153 PHE PHE A . n A 1 154 PHE 154 154 154 PHE PHE A . n A 1 155 GLY 155 155 155 GLY GLY A . n A 1 156 PHE 156 156 156 PHE PHE A . n A 1 157 THR 157 157 157 THR THR A . n A 1 158 SER 158 158 158 SER SER A . n A 1 159 LYS 159 159 159 LYS LYS A . n A 1 160 ALA 160 160 160 ALA ALA A . n A 1 161 GLU 161 161 161 GLU GLU A . n A 1 162 SER 162 162 162 SER SER A . n A 1 163 MET 163 163 163 MET MET A . n A 1 164 ARG 164 164 164 ARG ARG A . n A 1 165 PRO 165 165 165 PRO PRO A . n A 1 166 GLU 166 166 166 GLU GLU A . n A 1 167 VAL 167 167 167 VAL VAL A . n A 1 168 ALA 168 168 168 ALA ALA A . n A 1 169 SER 169 169 169 SER SER A . n A 1 170 THR 170 170 170 THR THR A . n A 1 171 PHE 171 171 171 PHE PHE A . n A 1 172 LYS 172 172 172 LYS LYS A . n A 1 173 VAL 173 173 173 VAL VAL A . n A 1 174 LEU 174 174 174 LEU LEU A . n A 1 175 ARG 175 175 175 ARG ARG A . n A 1 176 ASN 176 176 176 ASN ASN A . n A 1 177 VAL 177 177 177 VAL VAL A . n A 1 178 THR 178 178 178 THR THR A . n A 1 179 VAL 179 179 179 VAL VAL A . n A 1 180 VAL 180 180 180 VAL VAL A . n A 1 181 LEU 181 181 181 LEU LEU A . n A 1 182 TRP 182 182 182 TRP TRP A . n A 1 183 SER 183 183 183 SER SER A . n A 1 184 ALA 184 184 184 ALA ALA A . n A 1 185 TYR 185 185 185 TYR TYR A . n A 1 186 PRO 186 186 186 PRO PRO A . n A 1 187 VAL 187 187 187 VAL VAL A . n A 1 188 VAL 188 188 188 VAL VAL A . n A 1 189 TRP 189 189 189 TRP TRP A . n A 1 190 LEU 190 190 190 LEU LEU A . n A 1 191 ILE 191 191 191 ILE ILE A . n A 1 192 GLY 192 192 192 GLY GLY A . n A 1 193 SER 193 193 193 SER SER A . n A 1 194 GLU 194 194 194 GLU GLU A . n A 1 195 GLY 195 195 195 GLY GLY A . n A 1 196 ALA 196 196 196 ALA ALA A . n A 1 197 GLY 197 197 197 GLY GLY A . n A 1 198 ILE 198 198 198 ILE ILE A . n A 1 199 VAL 199 199 199 VAL VAL A . n A 1 200 PRO 200 200 200 PRO PRO A . n A 1 201 LEU 201 201 201 LEU LEU A . n A 1 202 ASN 202 202 202 ASN ASN A . n A 1 203 ILE 203 203 203 ILE ILE A . n A 1 204 GLU 204 204 204 GLU GLU A . n A 1 205 THR 205 205 205 THR THR A . n A 1 206 LEU 206 206 206 LEU LEU A . n A 1 207 LEU 207 207 207 LEU LEU A . n A 1 208 PHE 208 208 208 PHE PHE A . n A 1 209 MET 209 209 209 MET MET A . n A 1 210 VAL 210 210 210 VAL VAL A . n A 1 211 LEU 211 211 211 LEU LEU A . n A 1 212 ASP 212 212 212 ASP ASP A . n A 1 213 VAL 213 213 213 VAL VAL A . n A 1 214 SER 214 214 214 SER SER A . n A 1 215 ALA 215 215 215 ALA ALA A . n A 1 216 LYS 216 216 216 LYS LYS A . n A 1 217 VAL 217 217 217 VAL VAL A . n A 1 218 GLY 218 218 218 GLY GLY A . n A 1 219 PHE 219 219 219 PHE PHE A . n A 1 220 GLY 220 220 220 GLY GLY A . n A 1 221 LEU 221 221 221 LEU LEU A . n A 1 222 ILE 222 222 222 ILE ILE A . n A 1 223 LEU 223 223 223 LEU LEU A . n A 1 224 LEU 224 224 224 LEU LEU A . n A 1 225 ARG 225 225 225 ARG ARG A . n A 1 226 SER 226 226 226 SER SER A . n A 1 227 ARG 227 227 227 ARG ARG A . n A 1 228 ALA 228 228 228 ALA ALA A . n A 1 229 ILE 229 229 229 ILE ILE A . n A 1 230 PHE 230 230 230 PHE PHE A . n A 1 231 GLY 231 231 ? ? ? A . n A 1 232 GLU 232 232 ? ? ? A . n A 1 233 ALA 233 233 ? ? ? A . n A 1 234 GLU 234 234 ? ? ? A . n A 1 235 ALA 235 235 ? ? ? A . n A 1 236 PRO 236 236 ? ? ? A . n A 1 237 GLU 237 237 ? ? ? A . n A 1 238 PRO 238 238 ? ? ? A . n A 1 239 SER 239 239 ? ? ? A . n A 1 240 ALA 240 240 ? ? ? A . n A 1 241 GLY 241 241 ? ? ? A . n A 1 242 ASP 242 242 ? ? ? A . n A 1 243 GLY 243 243 ? ? ? A . n A 1 244 ALA 244 244 ? ? ? A . n A 1 245 ALA 245 245 ? ? ? A . n A 1 246 ALA 246 246 ? ? ? A . n A 1 247 THR 247 247 ? ? ? A . n A 1 248 SER 248 248 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 RET 1 250 250 RET RET A . D 4 L1P 1 260 260 L1P L1P A . E 5 L2P 1 270 270 L2P L2P A . F 6 L3P 1 280 280 L3P L3P A . G 7 L4P 1 290 290 L4P L4P A . H 5 L2P 1 300 300 L2P L2P A . I 8 HOH 1 2001 2001 HOH HOH A . I 8 HOH 2 2002 2002 HOH HOH A . I 8 HOH 3 2003 2003 HOH HOH A . I 8 HOH 4 2004 2004 HOH HOH A . I 8 HOH 5 2005 2005 HOH HOH A . I 8 HOH 6 2006 2006 HOH HOH A . I 8 HOH 7 2007 2007 HOH HOH A . I 8 HOH 8 2008 2008 HOH HOH A . I 8 HOH 9 2009 2009 HOH HOH A . I 8 HOH 10 2010 2010 HOH HOH A . I 8 HOH 11 2011 2011 HOH HOH A . I 8 HOH 12 2012 2012 HOH HOH A . I 8 HOH 13 2013 2013 HOH HOH A . I 8 HOH 14 2014 2014 HOH HOH A . I 8 HOH 15 2015 2015 HOH HOH A . I 8 HOH 16 2016 2016 HOH HOH A . I 8 HOH 17 2017 2017 HOH HOH A . I 8 HOH 18 2018 2018 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 10290 ? 1 MORE -79.2 ? 1 'SSA (A^2)' 31220 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 3_665 -x+y+1,-x+1,z -0.5000000000 0.8660254038 0.0000000000 51.2000000000 -0.8660254038 -0.5000000000 0.0000000000 88.6810013475 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 2_655 -y+1,x-y,z -0.5000000000 -0.8660254038 0.0000000000 102.4000000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2000-08-16 2 'Structure model' 1 1 2011-05-07 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2019-03-06 5 'Structure model' 2 0 2020-07-29 6 'Structure model' 2 1 2023-12-06 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 5 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Derived calculations' 5 4 'Structure model' 'Experimental preparation' 6 4 'Structure model' Other 7 5 'Structure model' Advisory 8 5 'Structure model' 'Atomic model' 9 5 'Structure model' 'Data collection' 10 5 'Structure model' 'Derived calculations' 11 5 'Structure model' 'Structure summary' 12 6 'Structure model' 'Data collection' 13 6 'Structure model' 'Database references' 14 6 'Structure model' 'Derived calculations' 15 6 'Structure model' 'Refinement description' 16 6 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' exptl_crystal_grow 2 4 'Structure model' pdbx_database_proc 3 4 'Structure model' pdbx_database_status 4 4 'Structure model' struct_conn 5 5 'Structure model' atom_site 6 5 'Structure model' chem_comp 7 5 'Structure model' entity 8 5 'Structure model' pdbx_branch_scheme 9 5 'Structure model' pdbx_chem_comp_identifier 10 5 'Structure model' pdbx_entity_branch 11 5 'Structure model' pdbx_entity_branch_descriptor 12 5 'Structure model' pdbx_entity_branch_link 13 5 'Structure model' pdbx_entity_branch_list 14 5 'Structure model' pdbx_entity_nonpoly 15 5 'Structure model' pdbx_nonpoly_scheme 16 5 'Structure model' pdbx_struct_assembly_gen 17 5 'Structure model' pdbx_unobs_or_zero_occ_atoms 18 5 'Structure model' struct_asym 19 5 'Structure model' struct_conn 20 5 'Structure model' struct_site 21 5 'Structure model' struct_site_gen 22 6 'Structure model' chem_comp 23 6 'Structure model' chem_comp_atom 24 6 'Structure model' chem_comp_bond 25 6 'Structure model' database_2 26 6 'Structure model' pdbx_initial_refinement_model 27 6 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_exptl_crystal_grow.method' 2 4 'Structure model' '_pdbx_database_status.recvd_author_approval' 3 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 5 'Structure model' '_atom_site.B_iso_or_equiv' 5 5 'Structure model' '_atom_site.Cartn_x' 6 5 'Structure model' '_atom_site.Cartn_y' 7 5 'Structure model' '_atom_site.Cartn_z' 8 5 'Structure model' '_atom_site.auth_asym_id' 9 5 'Structure model' '_atom_site.auth_atom_id' 10 5 'Structure model' '_atom_site.auth_comp_id' 11 5 'Structure model' '_atom_site.auth_seq_id' 12 5 'Structure model' '_atom_site.label_asym_id' 13 5 'Structure model' '_atom_site.label_atom_id' 14 5 'Structure model' '_atom_site.label_comp_id' 15 5 'Structure model' '_atom_site.label_entity_id' 16 5 'Structure model' '_atom_site.type_symbol' 17 5 'Structure model' '_chem_comp.name' 18 5 'Structure model' '_chem_comp.type' 19 5 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 20 5 'Structure model' '_pdbx_unobs_or_zero_occ_atoms.label_asym_id' 21 5 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 22 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 23 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 24 5 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 25 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 26 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 27 6 'Structure model' '_chem_comp.pdbx_synonyms' 28 6 'Structure model' '_database_2.pdbx_DOI' 29 6 'Structure model' '_database_2.pdbx_database_accession' 30 6 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR refinement 3.851 ? 1 MOSFLM 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 X-PLOR phasing . ? 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 7 ? ? -156.68 -58.06 2 1 SER A 162 ? ? -84.28 31.94 3 1 ALA A 196 ? ? -65.44 81.94 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 227 ? CG ? A ARG 227 CG 2 1 Y 1 A ARG 227 ? CD ? A ARG 227 CD 3 1 Y 1 A ARG 227 ? NE ? A ARG 227 NE 4 1 Y 1 A ARG 227 ? CZ ? A ARG 227 CZ 5 1 Y 1 A ARG 227 ? NH1 ? A ARG 227 NH1 6 1 Y 1 A ARG 227 ? NH2 ? A ARG 227 NH2 7 1 N 1 A L1P 260 ? C51 ? D L1P 1 C51 8 1 N 1 A L1P 260 ? C52 ? D L1P 1 C52 9 1 N 1 A L1P 260 ? C53 ? D L1P 1 C53 10 1 N 1 A L1P 260 ? C54 ? D L1P 1 C54 11 1 N 1 A L1P 260 ? C55 ? D L1P 1 C55 12 1 N 1 A L1P 260 ? C56 ? D L1P 1 C56 13 1 N 1 A L1P 260 ? C57 ? D L1P 1 C57 14 1 N 1 A L1P 260 ? C58 ? D L1P 1 C58 15 1 N 1 A L1P 260 ? C59 ? D L1P 1 C59 16 1 N 1 A L1P 260 ? C60 ? D L1P 1 C60 17 1 N 1 A L2P 270 ? C58 ? E L2P 1 C58 18 1 N 1 A L2P 270 ? C59 ? E L2P 1 C59 19 1 N 1 A L2P 270 ? C60 ? E L2P 1 C60 20 1 N 1 A L3P 280 ? C22 ? F L3P 1 C22 21 1 N 1 A L3P 280 ? C23 ? F L3P 1 C23 22 1 N 1 A L3P 280 ? C24 ? F L3P 1 C24 23 1 N 1 A L3P 280 ? C25 ? F L3P 1 C25 24 1 N 1 A L3P 280 ? C26 ? F L3P 1 C26 25 1 N 1 A L3P 280 ? C27 ? F L3P 1 C27 26 1 N 1 A L3P 280 ? C28 ? F L3P 1 C28 27 1 N 1 A L3P 280 ? C29 ? F L3P 1 C29 28 1 N 1 A L3P 280 ? C30 ? F L3P 1 C30 29 1 N 1 A L3P 280 ? C51 ? F L3P 1 C51 30 1 N 1 A L3P 280 ? C52 ? F L3P 1 C52 31 1 N 1 A L3P 280 ? C53 ? F L3P 1 C53 32 1 N 1 A L3P 280 ? C54 ? F L3P 1 C54 33 1 N 1 A L3P 280 ? C55 ? F L3P 1 C55 34 1 N 1 A L3P 280 ? C56 ? F L3P 1 C56 35 1 N 1 A L3P 280 ? C57 ? F L3P 1 C57 36 1 N 1 A L3P 280 ? C58 ? F L3P 1 C58 37 1 N 1 A L3P 280 ? C59 ? F L3P 1 C59 38 1 N 1 A L3P 280 ? C60 ? F L3P 1 C60 39 1 N 1 A L4P 290 ? O6 ? G L4P 1 O6 40 1 N 1 A L4P 290 ? C48 ? G L4P 1 C48 41 1 N 1 A L4P 290 ? C49 ? G L4P 1 C49 42 1 N 1 A L4P 290 ? C50 ? G L4P 1 C50 43 1 N 1 A L4P 290 ? C51 ? G L4P 1 C51 44 1 N 1 A L4P 290 ? C52 ? G L4P 1 C52 45 1 N 1 A L4P 290 ? C53 ? G L4P 1 C53 46 1 N 1 A L4P 290 ? C54 ? G L4P 1 C54 47 1 N 1 A L4P 290 ? C55 ? G L4P 1 C55 48 1 N 1 A L4P 290 ? C56 ? G L4P 1 C56 49 1 N 1 A L4P 290 ? C57 ? G L4P 1 C57 50 1 N 1 A L4P 290 ? C58 ? G L4P 1 C58 51 1 N 1 A L4P 290 ? C59 ? G L4P 1 C59 52 1 N 1 A L4P 290 ? C60 ? G L4P 1 C60 53 1 N 1 A L2P 300 ? C18 ? H L2P 1 C18 54 1 N 1 A L2P 300 ? C19 ? H L2P 1 C19 55 1 N 1 A L2P 300 ? C20 ? H L2P 1 C20 56 1 N 1 A L2P 300 ? C21 ? H L2P 1 C21 57 1 N 1 A L2P 300 ? C22 ? H L2P 1 C22 58 1 N 1 A L2P 300 ? C23 ? H L2P 1 C23 59 1 N 1 A L2P 300 ? C24 ? H L2P 1 C24 60 1 N 1 A L2P 300 ? C25 ? H L2P 1 C25 61 1 N 1 A L2P 300 ? C26 ? H L2P 1 C26 62 1 N 1 A L2P 300 ? C27 ? H L2P 1 C27 63 1 N 1 A L2P 300 ? C28 ? H L2P 1 C28 64 1 N 1 A L2P 300 ? C29 ? H L2P 1 C29 65 1 N 1 A L2P 300 ? C30 ? H L2P 1 C30 66 1 N 1 A L2P 300 ? C58 ? H L2P 1 C58 67 1 N 1 A L2P 300 ? C59 ? H L2P 1 C59 68 1 N 1 A L2P 300 ? C60 ? H L2P 1 C60 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLN 1 ? A GLN 1 2 1 Y 1 A ALA 2 ? A ALA 2 3 1 Y 1 A GLN 3 ? A GLN 3 4 1 Y 1 A ILE 4 ? A ILE 4 5 1 Y 1 A THR 5 ? A THR 5 6 1 Y 1 A GLY 231 ? A GLY 231 7 1 Y 1 A GLU 232 ? A GLU 232 8 1 Y 1 A ALA 233 ? A ALA 233 9 1 Y 1 A GLU 234 ? A GLU 234 10 1 Y 1 A ALA 235 ? A ALA 235 11 1 Y 1 A PRO 236 ? A PRO 236 12 1 Y 1 A GLU 237 ? A GLU 237 13 1 Y 1 A PRO 238 ? A PRO 238 14 1 Y 1 A SER 239 ? A SER 239 15 1 Y 1 A ALA 240 ? A ALA 240 16 1 Y 1 A GLY 241 ? A GLY 241 17 1 Y 1 A ASP 242 ? A ASP 242 18 1 Y 1 A GLY 243 ? A GLY 243 19 1 Y 1 A ALA 244 ? A ALA 244 20 1 Y 1 A ALA 245 ? A ALA 245 21 1 Y 1 A ALA 246 ? A ALA 246 22 1 Y 1 A THR 247 ? A THR 247 23 1 Y 1 A SER 248 ? A SER 248 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GAL C1 C N R 74 GAL C2 C N R 75 GAL C3 C N S 76 GAL C4 C N R 77 GAL C5 C N R 78 GAL C6 C N N 79 GAL O1 O N N 80 GAL O2 O N N 81 GAL O3 O N N 82 GAL O4 O N N 83 GAL O5 O N N 84 GAL O6 O N N 85 GAL H1 H N N 86 GAL H2 H N N 87 GAL H3 H N N 88 GAL H4 H N N 89 GAL H5 H N N 90 GAL H61 H N N 91 GAL H62 H N N 92 GAL HO1 H N N 93 GAL HO2 H N N 94 GAL HO3 H N N 95 GAL HO4 H N N 96 GAL HO6 H N N 97 GLC C1 C N S 98 GLC C2 C N R 99 GLC C3 C N S 100 GLC C4 C N S 101 GLC C5 C N R 102 GLC C6 C N N 103 GLC O1 O N N 104 GLC O2 O N N 105 GLC O3 O N N 106 GLC O4 O N N 107 GLC O5 O N N 108 GLC O6 O N N 109 GLC H1 H N N 110 GLC H2 H N N 111 GLC H3 H N N 112 GLC H4 H N N 113 GLC H5 H N N 114 GLC H61 H N N 115 GLC H62 H N N 116 GLC HO1 H N N 117 GLC HO2 H N N 118 GLC HO3 H N N 119 GLC HO4 H N N 120 GLC HO6 H N N 121 GLN N N N N 122 GLN CA C N S 123 GLN C C N N 124 GLN O O N N 125 GLN CB C N N 126 GLN CG C N N 127 GLN CD C N N 128 GLN OE1 O N N 129 GLN NE2 N N N 130 GLN OXT O N N 131 GLN H H N N 132 GLN H2 H N N 133 GLN HA H N N 134 GLN HB2 H N N 135 GLN HB3 H N N 136 GLN HG2 H N N 137 GLN HG3 H N N 138 GLN HE21 H N N 139 GLN HE22 H N N 140 GLN HXT H N N 141 GLU N N N N 142 GLU CA C N S 143 GLU C C N N 144 GLU O O N N 145 GLU CB C N N 146 GLU CG C N N 147 GLU CD C N N 148 GLU OE1 O N N 149 GLU OE2 O N N 150 GLU OXT O N N 151 GLU H H N N 152 GLU H2 H N N 153 GLU HA H N N 154 GLU HB2 H N N 155 GLU HB3 H N N 156 GLU HG2 H N N 157 GLU HG3 H N N 158 GLU HE2 H N N 159 GLU HXT H N N 160 GLY N N N N 161 GLY CA C N N 162 GLY C C N N 163 GLY O O N N 164 GLY OXT O N N 165 GLY H H N N 166 GLY H2 H N N 167 GLY HA2 H N N 168 GLY HA3 H N N 169 GLY HXT H N N 170 HOH O O N N 171 HOH H1 H N N 172 HOH H2 H N N 173 ILE N N N N 174 ILE CA C N S 175 ILE C C N N 176 ILE O O N N 177 ILE CB C N S 178 ILE CG1 C N N 179 ILE CG2 C N N 180 ILE CD1 C N N 181 ILE OXT O N N 182 ILE H H N N 183 ILE H2 H N N 184 ILE HA H N N 185 ILE HB H N N 186 ILE HG12 H N N 187 ILE HG13 H N N 188 ILE HG21 H N N 189 ILE HG22 H N N 190 ILE HG23 H N N 191 ILE HD11 H N N 192 ILE HD12 H N N 193 ILE HD13 H N N 194 ILE HXT H N N 195 L1P C1 C N N 196 L1P O1 O N N 197 L1P C2 C N S 198 L1P O2 O N N 199 L1P C3 C N N 200 L1P O3 O N N 201 L1P P P N N 202 L1P O1P O N N 203 L1P O2P O N N 204 L1P O3P O N N 205 L1P C11 C N N 206 L1P C12 C N N 207 L1P C13 C N R 208 L1P C14 C N N 209 L1P C15 C N N 210 L1P C16 C N N 211 L1P C17 C N N 212 L1P C18 C N R 213 L1P C19 C N N 214 L1P C20 C N N 215 L1P C21 C N N 216 L1P C22 C N N 217 L1P C23 C N R 218 L1P C24 C N N 219 L1P C25 C N N 220 L1P C26 C N N 221 L1P C27 C N N 222 L1P C28 C N N 223 L1P C29 C N N 224 L1P C30 C N N 225 L1P C41 C N N 226 L1P C42 C N N 227 L1P C43 C N R 228 L1P C44 C N N 229 L1P C45 C N N 230 L1P C46 C N N 231 L1P C47 C N N 232 L1P C48 C N R 233 L1P C49 C N N 234 L1P C50 C N N 235 L1P C51 C N N 236 L1P C52 C N N 237 L1P C53 C N R 238 L1P C54 C N N 239 L1P C55 C N N 240 L1P C56 C N N 241 L1P C57 C N N 242 L1P C58 C N N 243 L1P C59 C N N 244 L1P C60 C N N 245 L1P H12 H N N 246 L1P H11 H N N 247 L1P H2 H N N 248 L1P H32 H N N 249 L1P H31 H N N 250 L1P HOP2 H N N 251 L1P HOP3 H N N 252 L1P H112 H N N 253 L1P H111 H N N 254 L1P H122 H N N 255 L1P H121 H N N 256 L1P H13 H N N 257 L1P H143 H N N 258 L1P H142 H N N 259 L1P H141 H N N 260 L1P H152 H N N 261 L1P H151 H N N 262 L1P H162 H N N 263 L1P H161 H N N 264 L1P H172 H N N 265 L1P H171 H N N 266 L1P H18 H N N 267 L1P H193 H N N 268 L1P H192 H N N 269 L1P H191 H N N 270 L1P H202 H N N 271 L1P H201 H N N 272 L1P H212 H N N 273 L1P H211 H N N 274 L1P H222 H N N 275 L1P H221 H N N 276 L1P H23 H N N 277 L1P H243 H N N 278 L1P H242 H N N 279 L1P H241 H N N 280 L1P H252 H N N 281 L1P H251 H N N 282 L1P H262 H N N 283 L1P H261 H N N 284 L1P H272 H N N 285 L1P H271 H N N 286 L1P H28 H N N 287 L1P H293 H N N 288 L1P H292 H N N 289 L1P H291 H N N 290 L1P H303 H N N 291 L1P H302 H N N 292 L1P H301 H N N 293 L1P H412 H N N 294 L1P H411 H N N 295 L1P H422 H N N 296 L1P H421 H N N 297 L1P H43 H N N 298 L1P H443 H N N 299 L1P H442 H N N 300 L1P H441 H N N 301 L1P H452 H N N 302 L1P H451 H N N 303 L1P H462 H N N 304 L1P H461 H N N 305 L1P H472 H N N 306 L1P H471 H N N 307 L1P H48 H N N 308 L1P H493 H N N 309 L1P H492 H N N 310 L1P H491 H N N 311 L1P H502 H N N 312 L1P H501 H N N 313 L1P H512 H N N 314 L1P H511 H N N 315 L1P H522 H N N 316 L1P H521 H N N 317 L1P H53 H N N 318 L1P H543 H N N 319 L1P H542 H N N 320 L1P H541 H N N 321 L1P H552 H N N 322 L1P H551 H N N 323 L1P H562 H N N 324 L1P H561 H N N 325 L1P H572 H N N 326 L1P H571 H N N 327 L1P H58 H N N 328 L1P H593 H N N 329 L1P H592 H N N 330 L1P H591 H N N 331 L1P H603 H N N 332 L1P H602 H N N 333 L1P H601 H N N 334 L2P C1 C N N 335 L2P O1 O N N 336 L2P C2 C N R 337 L2P O2 O N N 338 L2P C3 C N N 339 L2P O3 O N N 340 L2P C11 C N N 341 L2P C12 C N N 342 L2P C13 C N R 343 L2P C14 C N N 344 L2P C15 C N N 345 L2P C16 C N N 346 L2P C17 C N N 347 L2P C18 C N R 348 L2P C19 C N N 349 L2P C20 C N N 350 L2P C21 C N N 351 L2P C22 C N N 352 L2P C23 C N R 353 L2P C24 C N N 354 L2P C25 C N N 355 L2P C26 C N N 356 L2P C27 C N N 357 L2P C28 C N N 358 L2P C29 C N N 359 L2P C30 C N N 360 L2P C41 C N N 361 L2P C42 C N N 362 L2P C43 C N R 363 L2P C44 C N N 364 L2P C45 C N N 365 L2P C46 C N N 366 L2P C47 C N N 367 L2P C48 C N R 368 L2P C49 C N N 369 L2P C50 C N N 370 L2P C51 C N N 371 L2P C52 C N N 372 L2P C53 C N R 373 L2P C54 C N N 374 L2P C55 C N N 375 L2P C56 C N N 376 L2P C57 C N N 377 L2P C58 C N N 378 L2P C59 C N N 379 L2P C60 C N N 380 L2P H12 H N N 381 L2P H11 H N N 382 L2P H2 H N N 383 L2P H32 H N N 384 L2P H31 H N N 385 L2P H3O H N N 386 L2P H112 H N N 387 L2P H111 H N N 388 L2P H122 H N N 389 L2P H121 H N N 390 L2P H13 H N N 391 L2P H143 H N N 392 L2P H142 H N N 393 L2P H141 H N N 394 L2P H152 H N N 395 L2P H151 H N N 396 L2P H162 H N N 397 L2P H161 H N N 398 L2P H172 H N N 399 L2P H171 H N N 400 L2P H18 H N N 401 L2P H193 H N N 402 L2P H192 H N N 403 L2P H191 H N N 404 L2P H202 H N N 405 L2P H201 H N N 406 L2P H212 H N N 407 L2P H211 H N N 408 L2P H222 H N N 409 L2P H221 H N N 410 L2P H23 H N N 411 L2P H243 H N N 412 L2P H242 H N N 413 L2P H241 H N N 414 L2P H252 H N N 415 L2P H251 H N N 416 L2P H262 H N N 417 L2P H261 H N N 418 L2P H272 H N N 419 L2P H271 H N N 420 L2P H28 H N N 421 L2P H293 H N N 422 L2P H292 H N N 423 L2P H291 H N N 424 L2P H303 H N N 425 L2P H302 H N N 426 L2P H301 H N N 427 L2P H412 H N N 428 L2P H411 H N N 429 L2P H422 H N N 430 L2P H421 H N N 431 L2P H43 H N N 432 L2P H443 H N N 433 L2P H442 H N N 434 L2P H441 H N N 435 L2P H452 H N N 436 L2P H451 H N N 437 L2P H462 H N N 438 L2P H461 H N N 439 L2P H472 H N N 440 L2P H471 H N N 441 L2P H48 H N N 442 L2P H493 H N N 443 L2P H492 H N N 444 L2P H491 H N N 445 L2P H502 H N N 446 L2P H501 H N N 447 L2P H512 H N N 448 L2P H511 H N N 449 L2P H522 H N N 450 L2P H521 H N N 451 L2P H53 H N N 452 L2P H543 H N N 453 L2P H542 H N N 454 L2P H541 H N N 455 L2P H552 H N N 456 L2P H551 H N N 457 L2P H562 H N N 458 L2P H561 H N N 459 L2P H572 H N N 460 L2P H571 H N N 461 L2P H58 H N N 462 L2P H593 H N N 463 L2P H592 H N N 464 L2P H591 H N N 465 L2P H603 H N N 466 L2P H602 H N N 467 L2P H601 H N N 468 L3P C1 C N N 469 L3P C2 C N S 470 L3P C3 C N N 471 L3P C4 C N N 472 L3P C5 C N R 473 L3P C6 C N N 474 L3P O1 O N N 475 L3P O2 O N N 476 L3P O3 O N N 477 L3P O4 O N N 478 L3P O5 O N N 479 L3P O6 O N N 480 L3P O1P O N N 481 L3P O2P O N N 482 L3P O4P O N N 483 L3P O5P O N N 484 L3P O6P O N N 485 L3P P1 P N N 486 L3P P2 P N N 487 L3P C11 C N N 488 L3P C12 C N N 489 L3P C13 C N R 490 L3P C14 C N N 491 L3P C15 C N N 492 L3P C16 C N N 493 L3P C17 C N N 494 L3P C18 C N R 495 L3P C19 C N N 496 L3P C20 C N N 497 L3P C21 C N N 498 L3P C22 C N N 499 L3P C23 C N R 500 L3P C24 C N N 501 L3P C25 C N N 502 L3P C26 C N N 503 L3P C27 C N N 504 L3P C28 C N N 505 L3P C29 C N N 506 L3P C30 C N N 507 L3P C41 C N N 508 L3P C42 C N N 509 L3P C43 C N R 510 L3P C44 C N N 511 L3P C45 C N N 512 L3P C46 C N N 513 L3P C47 C N N 514 L3P C48 C N R 515 L3P C49 C N N 516 L3P C50 C N N 517 L3P C51 C N N 518 L3P C52 C N N 519 L3P C53 C N R 520 L3P C54 C N N 521 L3P C55 C N N 522 L3P C56 C N N 523 L3P C57 C N N 524 L3P C58 C N N 525 L3P C59 C N N 526 L3P C60 C N N 527 L3P H12 H N N 528 L3P H11 H N N 529 L3P H2 H N N 530 L3P H32 H N N 531 L3P H31 H N N 532 L3P H42 H N N 533 L3P H41 H N N 534 L3P H5 H N N 535 L3P H62 H N N 536 L3P H61 H N N 537 L3P H5O H N N 538 L3P HOP6 H N N 539 L3P H112 H N N 540 L3P H111 H N N 541 L3P H122 H N N 542 L3P H121 H N N 543 L3P H13 H N N 544 L3P H143 H N N 545 L3P H142 H N N 546 L3P H141 H N N 547 L3P H152 H N N 548 L3P H151 H N N 549 L3P H162 H N N 550 L3P H161 H N N 551 L3P H172 H N N 552 L3P H171 H N N 553 L3P H18 H N N 554 L3P H193 H N N 555 L3P H192 H N N 556 L3P H191 H N N 557 L3P H202 H N N 558 L3P H201 H N N 559 L3P H212 H N N 560 L3P H211 H N N 561 L3P H222 H N N 562 L3P H221 H N N 563 L3P H23 H N N 564 L3P H243 H N N 565 L3P H242 H N N 566 L3P H241 H N N 567 L3P H252 H N N 568 L3P H251 H N N 569 L3P H262 H N N 570 L3P H261 H N N 571 L3P H272 H N N 572 L3P H271 H N N 573 L3P H28 H N N 574 L3P H293 H N N 575 L3P H292 H N N 576 L3P H291 H N N 577 L3P H303 H N N 578 L3P H302 H N N 579 L3P H301 H N N 580 L3P H412 H N N 581 L3P H411 H N N 582 L3P H422 H N N 583 L3P H421 H N N 584 L3P H43 H N N 585 L3P H443 H N N 586 L3P H442 H N N 587 L3P H441 H N N 588 L3P H452 H N N 589 L3P H451 H N N 590 L3P H462 H N N 591 L3P H461 H N N 592 L3P H472 H N N 593 L3P H471 H N N 594 L3P H48 H N N 595 L3P H493 H N N 596 L3P H492 H N N 597 L3P H491 H N N 598 L3P H502 H N N 599 L3P H501 H N N 600 L3P H512 H N N 601 L3P H511 H N N 602 L3P H522 H N N 603 L3P H521 H N N 604 L3P H53 H N N 605 L3P H543 H N N 606 L3P H542 H N N 607 L3P H541 H N N 608 L3P H552 H N N 609 L3P H551 H N N 610 L3P H562 H N N 611 L3P H561 H N N 612 L3P H572 H N N 613 L3P H571 H N N 614 L3P H58 H N N 615 L3P H593 H N N 616 L3P H592 H N N 617 L3P H591 H N N 618 L3P H603 H N N 619 L3P H602 H N N 620 L3P H601 H N N 621 L4P C1 C N N 622 L4P C2 C N S 623 L4P C3 C N N 624 L4P C4 C N N 625 L4P C5 C N R 626 L4P C6 C N N 627 L4P O1 O N N 628 L4P O2 O N N 629 L4P O3 O N N 630 L4P O4 O N N 631 L4P O5 O N N 632 L4P O6 O N N 633 L4P O1P O N N 634 L4P O2P O N N 635 L4P P1 P N S 636 L4P C11 C N N 637 L4P C12 C N N 638 L4P C13 C N R 639 L4P C14 C N N 640 L4P C15 C N N 641 L4P C16 C N N 642 L4P C17 C N N 643 L4P C18 C N R 644 L4P C19 C N N 645 L4P C20 C N N 646 L4P C21 C N N 647 L4P C22 C N N 648 L4P C23 C N R 649 L4P C24 C N N 650 L4P C25 C N N 651 L4P C26 C N N 652 L4P C27 C N N 653 L4P C28 C N N 654 L4P C29 C N N 655 L4P C30 C N N 656 L4P C41 C N N 657 L4P C42 C N N 658 L4P C43 C N R 659 L4P C44 C N N 660 L4P C45 C N N 661 L4P C46 C N N 662 L4P C47 C N N 663 L4P C48 C N R 664 L4P C49 C N N 665 L4P C50 C N N 666 L4P C51 C N N 667 L4P C52 C N N 668 L4P C53 C N R 669 L4P C54 C N N 670 L4P C55 C N N 671 L4P C56 C N N 672 L4P C57 C N N 673 L4P C58 C N N 674 L4P C59 C N N 675 L4P C60 C N N 676 L4P H12 H N N 677 L4P H11 H N N 678 L4P H2 H N N 679 L4P H32 H N N 680 L4P H31 H N N 681 L4P H42 H N N 682 L4P H41 H N N 683 L4P H5 H N N 684 L4P H62 H N N 685 L4P H61 H N N 686 L4P H5O H N N 687 L4P H6O H N N 688 L4P HOP2 H N N 689 L4P H112 H N N 690 L4P H111 H N N 691 L4P H122 H N N 692 L4P H121 H N N 693 L4P H13 H N N 694 L4P H143 H N N 695 L4P H142 H N N 696 L4P H141 H N N 697 L4P H152 H N N 698 L4P H151 H N N 699 L4P H162 H N N 700 L4P H161 H N N 701 L4P H172 H N N 702 L4P H171 H N N 703 L4P H18 H N N 704 L4P H193 H N N 705 L4P H192 H N N 706 L4P H191 H N N 707 L4P H202 H N N 708 L4P H201 H N N 709 L4P H212 H N N 710 L4P H211 H N N 711 L4P H222 H N N 712 L4P H221 H N N 713 L4P H23 H N N 714 L4P H243 H N N 715 L4P H242 H N N 716 L4P H241 H N N 717 L4P H252 H N N 718 L4P H251 H N N 719 L4P H262 H N N 720 L4P H261 H N N 721 L4P H272 H N N 722 L4P H271 H N N 723 L4P H28 H N N 724 L4P H293 H N N 725 L4P H292 H N N 726 L4P H291 H N N 727 L4P H303 H N N 728 L4P H302 H N N 729 L4P H301 H N N 730 L4P H412 H N N 731 L4P H411 H N N 732 L4P H422 H N N 733 L4P H421 H N N 734 L4P H43 H N N 735 L4P H443 H N N 736 L4P H442 H N N 737 L4P H441 H N N 738 L4P H452 H N N 739 L4P H451 H N N 740 L4P H462 H N N 741 L4P H461 H N N 742 L4P H472 H N N 743 L4P H471 H N N 744 L4P H48 H N N 745 L4P H493 H N N 746 L4P H492 H N N 747 L4P H491 H N N 748 L4P H502 H N N 749 L4P H501 H N N 750 L4P H512 H N N 751 L4P H511 H N N 752 L4P H522 H N N 753 L4P H521 H N N 754 L4P H53 H N N 755 L4P H543 H N N 756 L4P H542 H N N 757 L4P H541 H N N 758 L4P H552 H N N 759 L4P H551 H N N 760 L4P H562 H N N 761 L4P H561 H N N 762 L4P H572 H N N 763 L4P H571 H N N 764 L4P H58 H N N 765 L4P H593 H N N 766 L4P H592 H N N 767 L4P H591 H N N 768 L4P H603 H N N 769 L4P H602 H N N 770 L4P H601 H N N 771 LEU N N N N 772 LEU CA C N S 773 LEU C C N N 774 LEU O O N N 775 LEU CB C N N 776 LEU CG C N N 777 LEU CD1 C N N 778 LEU CD2 C N N 779 LEU OXT O N N 780 LEU H H N N 781 LEU H2 H N N 782 LEU HA H N N 783 LEU HB2 H N N 784 LEU HB3 H N N 785 LEU HG H N N 786 LEU HD11 H N N 787 LEU HD12 H N N 788 LEU HD13 H N N 789 LEU HD21 H N N 790 LEU HD22 H N N 791 LEU HD23 H N N 792 LEU HXT H N N 793 LYS N N N N 794 LYS CA C N S 795 LYS C C N N 796 LYS O O N N 797 LYS CB C N N 798 LYS CG C N N 799 LYS CD C N N 800 LYS CE C N N 801 LYS NZ N N N 802 LYS OXT O N N 803 LYS H H N N 804 LYS H2 H N N 805 LYS HA H N N 806 LYS HB2 H N N 807 LYS HB3 H N N 808 LYS HG2 H N N 809 LYS HG3 H N N 810 LYS HD2 H N N 811 LYS HD3 H N N 812 LYS HE2 H N N 813 LYS HE3 H N N 814 LYS HZ1 H N N 815 LYS HZ2 H N N 816 LYS HZ3 H N N 817 LYS HXT H N N 818 MAN C1 C N S 819 MAN C2 C N S 820 MAN C3 C N S 821 MAN C4 C N S 822 MAN C5 C N R 823 MAN C6 C N N 824 MAN O1 O N N 825 MAN O2 O N N 826 MAN O3 O N N 827 MAN O4 O N N 828 MAN O5 O N N 829 MAN O6 O N N 830 MAN H1 H N N 831 MAN H2 H N N 832 MAN H3 H N N 833 MAN H4 H N N 834 MAN H5 H N N 835 MAN H61 H N N 836 MAN H62 H N N 837 MAN HO1 H N N 838 MAN HO2 H N N 839 MAN HO3 H N N 840 MAN HO4 H N N 841 MAN HO6 H N N 842 MET N N N N 843 MET CA C N S 844 MET C C N N 845 MET O O N N 846 MET CB C N N 847 MET CG C N N 848 MET SD S N N 849 MET CE C N N 850 MET OXT O N N 851 MET H H N N 852 MET H2 H N N 853 MET HA H N N 854 MET HB2 H N N 855 MET HB3 H N N 856 MET HG2 H N N 857 MET HG3 H N N 858 MET HE1 H N N 859 MET HE2 H N N 860 MET HE3 H N N 861 MET HXT H N N 862 PHE N N N N 863 PHE CA C N S 864 PHE C C N N 865 PHE O O N N 866 PHE CB C N N 867 PHE CG C Y N 868 PHE CD1 C Y N 869 PHE CD2 C Y N 870 PHE CE1 C Y N 871 PHE CE2 C Y N 872 PHE CZ C Y N 873 PHE OXT O N N 874 PHE H H N N 875 PHE H2 H N N 876 PHE HA H N N 877 PHE HB2 H N N 878 PHE HB3 H N N 879 PHE HD1 H N N 880 PHE HD2 H N N 881 PHE HE1 H N N 882 PHE HE2 H N N 883 PHE HZ H N N 884 PHE HXT H N N 885 PRO N N N N 886 PRO CA C N S 887 PRO C C N N 888 PRO O O N N 889 PRO CB C N N 890 PRO CG C N N 891 PRO CD C N N 892 PRO OXT O N N 893 PRO H H N N 894 PRO HA H N N 895 PRO HB2 H N N 896 PRO HB3 H N N 897 PRO HG2 H N N 898 PRO HG3 H N N 899 PRO HD2 H N N 900 PRO HD3 H N N 901 PRO HXT H N N 902 RET C1 C N N 903 RET C2 C N N 904 RET C3 C N N 905 RET C4 C N N 906 RET C5 C N N 907 RET C6 C N N 908 RET C7 C N N 909 RET C8 C N N 910 RET C9 C N N 911 RET C10 C N N 912 RET C11 C N N 913 RET C12 C N N 914 RET C13 C N N 915 RET C14 C N N 916 RET C15 C N N 917 RET O1 O N N 918 RET C16 C N N 919 RET C17 C N N 920 RET C18 C N N 921 RET C19 C N N 922 RET C20 C N N 923 RET H21 H N N 924 RET H22 H N N 925 RET H31 H N N 926 RET H32 H N N 927 RET H41 H N N 928 RET H42 H N N 929 RET H7 H N N 930 RET H8 H N N 931 RET H10 H N N 932 RET H11 H N N 933 RET H12 H N N 934 RET H14 H N N 935 RET H15 H N N 936 RET H161 H N N 937 RET H162 H N N 938 RET H163 H N N 939 RET H171 H N N 940 RET H172 H N N 941 RET H173 H N N 942 RET H181 H N N 943 RET H182 H N N 944 RET H183 H N N 945 RET H191 H N N 946 RET H192 H N N 947 RET H193 H N N 948 RET H201 H N N 949 RET H202 H N N 950 RET H203 H N N 951 SER N N N N 952 SER CA C N S 953 SER C C N N 954 SER O O N N 955 SER CB C N N 956 SER OG O N N 957 SER OXT O N N 958 SER H H N N 959 SER H2 H N N 960 SER HA H N N 961 SER HB2 H N N 962 SER HB3 H N N 963 SER HG H N N 964 SER HXT H N N 965 THR N N N N 966 THR CA C N S 967 THR C C N N 968 THR O O N N 969 THR CB C N R 970 THR OG1 O N N 971 THR CG2 C N N 972 THR OXT O N N 973 THR H H N N 974 THR H2 H N N 975 THR HA H N N 976 THR HB H N N 977 THR HG1 H N N 978 THR HG21 H N N 979 THR HG22 H N N 980 THR HG23 H N N 981 THR HXT H N N 982 TRP N N N N 983 TRP CA C N S 984 TRP C C N N 985 TRP O O N N 986 TRP CB C N N 987 TRP CG C Y N 988 TRP CD1 C Y N 989 TRP CD2 C Y N 990 TRP NE1 N Y N 991 TRP CE2 C Y N 992 TRP CE3 C Y N 993 TRP CZ2 C Y N 994 TRP CZ3 C Y N 995 TRP CH2 C Y N 996 TRP OXT O N N 997 TRP H H N N 998 TRP H2 H N N 999 TRP HA H N N 1000 TRP HB2 H N N 1001 TRP HB3 H N N 1002 TRP HD1 H N N 1003 TRP HE1 H N N 1004 TRP HE3 H N N 1005 TRP HZ2 H N N 1006 TRP HZ3 H N N 1007 TRP HH2 H N N 1008 TRP HXT H N N 1009 TYR N N N N 1010 TYR CA C N S 1011 TYR C C N N 1012 TYR O O N N 1013 TYR CB C N N 1014 TYR CG C Y N 1015 TYR CD1 C Y N 1016 TYR CD2 C Y N 1017 TYR CE1 C Y N 1018 TYR CE2 C Y N 1019 TYR CZ C Y N 1020 TYR OH O N N 1021 TYR OXT O N N 1022 TYR H H N N 1023 TYR H2 H N N 1024 TYR HA H N N 1025 TYR HB2 H N N 1026 TYR HB3 H N N 1027 TYR HD1 H N N 1028 TYR HD2 H N N 1029 TYR HE1 H N N 1030 TYR HE2 H N N 1031 TYR HH H N N 1032 TYR HXT H N N 1033 VAL N N N N 1034 VAL CA C N S 1035 VAL C C N N 1036 VAL O O N N 1037 VAL CB C N N 1038 VAL CG1 C N N 1039 VAL CG2 C N N 1040 VAL OXT O N N 1041 VAL H H N N 1042 VAL H2 H N N 1043 VAL HA H N N 1044 VAL HB H N N 1045 VAL HG11 H N N 1046 VAL HG12 H N N 1047 VAL HG13 H N N 1048 VAL HG21 H N N 1049 VAL HG22 H N N 1050 VAL HG23 H N N 1051 VAL HXT H N N 1052 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GAL C1 C2 sing N N 70 GAL C1 O1 sing N N 71 GAL C1 O5 sing N N 72 GAL C1 H1 sing N N 73 GAL C2 C3 sing N N 74 GAL C2 O2 sing N N 75 GAL C2 H2 sing N N 76 GAL C3 C4 sing N N 77 GAL C3 O3 sing N N 78 GAL C3 H3 sing N N 79 GAL C4 C5 sing N N 80 GAL C4 O4 sing N N 81 GAL C4 H4 sing N N 82 GAL C5 C6 sing N N 83 GAL C5 O5 sing N N 84 GAL C5 H5 sing N N 85 GAL C6 O6 sing N N 86 GAL C6 H61 sing N N 87 GAL C6 H62 sing N N 88 GAL O1 HO1 sing N N 89 GAL O2 HO2 sing N N 90 GAL O3 HO3 sing N N 91 GAL O4 HO4 sing N N 92 GAL O6 HO6 sing N N 93 GLC C1 C2 sing N N 94 GLC C1 O1 sing N N 95 GLC C1 O5 sing N N 96 GLC C1 H1 sing N N 97 GLC C2 C3 sing N N 98 GLC C2 O2 sing N N 99 GLC C2 H2 sing N N 100 GLC C3 C4 sing N N 101 GLC C3 O3 sing N N 102 GLC C3 H3 sing N N 103 GLC C4 C5 sing N N 104 GLC C4 O4 sing N N 105 GLC C4 H4 sing N N 106 GLC C5 C6 sing N N 107 GLC C5 O5 sing N N 108 GLC C5 H5 sing N N 109 GLC C6 O6 sing N N 110 GLC C6 H61 sing N N 111 GLC C6 H62 sing N N 112 GLC O1 HO1 sing N N 113 GLC O2 HO2 sing N N 114 GLC O3 HO3 sing N N 115 GLC O4 HO4 sing N N 116 GLC O6 HO6 sing N N 117 GLN N CA sing N N 118 GLN N H sing N N 119 GLN N H2 sing N N 120 GLN CA C sing N N 121 GLN CA CB sing N N 122 GLN CA HA sing N N 123 GLN C O doub N N 124 GLN C OXT sing N N 125 GLN CB CG sing N N 126 GLN CB HB2 sing N N 127 GLN CB HB3 sing N N 128 GLN CG CD sing N N 129 GLN CG HG2 sing N N 130 GLN CG HG3 sing N N 131 GLN CD OE1 doub N N 132 GLN CD NE2 sing N N 133 GLN NE2 HE21 sing N N 134 GLN NE2 HE22 sing N N 135 GLN OXT HXT sing N N 136 GLU N CA sing N N 137 GLU N H sing N N 138 GLU N H2 sing N N 139 GLU CA C sing N N 140 GLU CA CB sing N N 141 GLU CA HA sing N N 142 GLU C O doub N N 143 GLU C OXT sing N N 144 GLU CB CG sing N N 145 GLU CB HB2 sing N N 146 GLU CB HB3 sing N N 147 GLU CG CD sing N N 148 GLU CG HG2 sing N N 149 GLU CG HG3 sing N N 150 GLU CD OE1 doub N N 151 GLU CD OE2 sing N N 152 GLU OE2 HE2 sing N N 153 GLU OXT HXT sing N N 154 GLY N CA sing N N 155 GLY N H sing N N 156 GLY N H2 sing N N 157 GLY CA C sing N N 158 GLY CA HA2 sing N N 159 GLY CA HA3 sing N N 160 GLY C O doub N N 161 GLY C OXT sing N N 162 GLY OXT HXT sing N N 163 HOH O H1 sing N N 164 HOH O H2 sing N N 165 ILE N CA sing N N 166 ILE N H sing N N 167 ILE N H2 sing N N 168 ILE CA C sing N N 169 ILE CA CB sing N N 170 ILE CA HA sing N N 171 ILE C O doub N N 172 ILE C OXT sing N N 173 ILE CB CG1 sing N N 174 ILE CB CG2 sing N N 175 ILE CB HB sing N N 176 ILE CG1 CD1 sing N N 177 ILE CG1 HG12 sing N N 178 ILE CG1 HG13 sing N N 179 ILE CG2 HG21 sing N N 180 ILE CG2 HG22 sing N N 181 ILE CG2 HG23 sing N N 182 ILE CD1 HD11 sing N N 183 ILE CD1 HD12 sing N N 184 ILE CD1 HD13 sing N N 185 ILE OXT HXT sing N N 186 L1P C1 O1 sing N N 187 L1P C1 C2 sing N N 188 L1P C1 H12 sing N N 189 L1P C1 H11 sing N N 190 L1P O1 C11 sing N N 191 L1P C2 O2 sing N N 192 L1P C2 C3 sing N N 193 L1P C2 H2 sing N N 194 L1P O2 C41 sing N N 195 L1P C3 O3 sing N N 196 L1P C3 H32 sing N N 197 L1P C3 H31 sing N N 198 L1P O3 P sing N N 199 L1P P O1P doub N N 200 L1P P O2P sing N N 201 L1P P O3P sing N N 202 L1P O2P HOP2 sing N N 203 L1P O3P HOP3 sing N N 204 L1P C11 C12 sing N N 205 L1P C11 H112 sing N N 206 L1P C11 H111 sing N N 207 L1P C12 C13 sing N N 208 L1P C12 H122 sing N N 209 L1P C12 H121 sing N N 210 L1P C13 C14 sing N N 211 L1P C13 C15 sing N N 212 L1P C13 H13 sing N N 213 L1P C14 H143 sing N N 214 L1P C14 H142 sing N N 215 L1P C14 H141 sing N N 216 L1P C15 C16 sing N N 217 L1P C15 H152 sing N N 218 L1P C15 H151 sing N N 219 L1P C16 C17 sing N N 220 L1P C16 H162 sing N N 221 L1P C16 H161 sing N N 222 L1P C17 C18 sing N N 223 L1P C17 H172 sing N N 224 L1P C17 H171 sing N N 225 L1P C18 C19 sing N N 226 L1P C18 C20 sing N N 227 L1P C18 H18 sing N N 228 L1P C19 H193 sing N N 229 L1P C19 H192 sing N N 230 L1P C19 H191 sing N N 231 L1P C20 C21 sing N N 232 L1P C20 H202 sing N N 233 L1P C20 H201 sing N N 234 L1P C21 C22 sing N N 235 L1P C21 H212 sing N N 236 L1P C21 H211 sing N N 237 L1P C22 C23 sing N N 238 L1P C22 H222 sing N N 239 L1P C22 H221 sing N N 240 L1P C23 C24 sing N N 241 L1P C23 C25 sing N N 242 L1P C23 H23 sing N N 243 L1P C24 H243 sing N N 244 L1P C24 H242 sing N N 245 L1P C24 H241 sing N N 246 L1P C25 C26 sing N N 247 L1P C25 H252 sing N N 248 L1P C25 H251 sing N N 249 L1P C26 C27 sing N N 250 L1P C26 H262 sing N N 251 L1P C26 H261 sing N N 252 L1P C27 C28 sing N N 253 L1P C27 H272 sing N N 254 L1P C27 H271 sing N N 255 L1P C28 C29 sing N N 256 L1P C28 C30 sing N N 257 L1P C28 H28 sing N N 258 L1P C29 H293 sing N N 259 L1P C29 H292 sing N N 260 L1P C29 H291 sing N N 261 L1P C30 H303 sing N N 262 L1P C30 H302 sing N N 263 L1P C30 H301 sing N N 264 L1P C41 C42 sing N N 265 L1P C41 H412 sing N N 266 L1P C41 H411 sing N N 267 L1P C42 C43 sing N N 268 L1P C42 H422 sing N N 269 L1P C42 H421 sing N N 270 L1P C43 C44 sing N N 271 L1P C43 C45 sing N N 272 L1P C43 H43 sing N N 273 L1P C44 H443 sing N N 274 L1P C44 H442 sing N N 275 L1P C44 H441 sing N N 276 L1P C45 C46 sing N N 277 L1P C45 H452 sing N N 278 L1P C45 H451 sing N N 279 L1P C46 C47 sing N N 280 L1P C46 H462 sing N N 281 L1P C46 H461 sing N N 282 L1P C47 C48 sing N N 283 L1P C47 H472 sing N N 284 L1P C47 H471 sing N N 285 L1P C48 C49 sing N N 286 L1P C48 C50 sing N N 287 L1P C48 H48 sing N N 288 L1P C49 H493 sing N N 289 L1P C49 H492 sing N N 290 L1P C49 H491 sing N N 291 L1P C50 C51 sing N N 292 L1P C50 H502 sing N N 293 L1P C50 H501 sing N N 294 L1P C51 C52 sing N N 295 L1P C51 H512 sing N N 296 L1P C51 H511 sing N N 297 L1P C52 C53 sing N N 298 L1P C52 H522 sing N N 299 L1P C52 H521 sing N N 300 L1P C53 C54 sing N N 301 L1P C53 C55 sing N N 302 L1P C53 H53 sing N N 303 L1P C54 H543 sing N N 304 L1P C54 H542 sing N N 305 L1P C54 H541 sing N N 306 L1P C55 C56 sing N N 307 L1P C55 H552 sing N N 308 L1P C55 H551 sing N N 309 L1P C56 C57 sing N N 310 L1P C56 H562 sing N N 311 L1P C56 H561 sing N N 312 L1P C57 C58 sing N N 313 L1P C57 H572 sing N N 314 L1P C57 H571 sing N N 315 L1P C58 C59 sing N N 316 L1P C58 C60 sing N N 317 L1P C58 H58 sing N N 318 L1P C59 H593 sing N N 319 L1P C59 H592 sing N N 320 L1P C59 H591 sing N N 321 L1P C60 H603 sing N N 322 L1P C60 H602 sing N N 323 L1P C60 H601 sing N N 324 L2P C1 O1 sing N N 325 L2P C1 C2 sing N N 326 L2P C1 H12 sing N N 327 L2P C1 H11 sing N N 328 L2P O1 C11 sing N N 329 L2P C2 O2 sing N N 330 L2P C2 C3 sing N N 331 L2P C2 H2 sing N N 332 L2P O2 C41 sing N N 333 L2P C3 O3 sing N N 334 L2P C3 H32 sing N N 335 L2P C3 H31 sing N N 336 L2P O3 H3O sing N N 337 L2P C11 C12 sing N N 338 L2P C11 H112 sing N N 339 L2P C11 H111 sing N N 340 L2P C12 C13 sing N N 341 L2P C12 H122 sing N N 342 L2P C12 H121 sing N N 343 L2P C13 C14 sing N N 344 L2P C13 C15 sing N N 345 L2P C13 H13 sing N N 346 L2P C14 H143 sing N N 347 L2P C14 H142 sing N N 348 L2P C14 H141 sing N N 349 L2P C15 C16 sing N N 350 L2P C15 H152 sing N N 351 L2P C15 H151 sing N N 352 L2P C16 C17 sing N N 353 L2P C16 H162 sing N N 354 L2P C16 H161 sing N N 355 L2P C17 C18 sing N N 356 L2P C17 H172 sing N N 357 L2P C17 H171 sing N N 358 L2P C18 C19 sing N N 359 L2P C18 C20 sing N N 360 L2P C18 H18 sing N N 361 L2P C19 H193 sing N N 362 L2P C19 H192 sing N N 363 L2P C19 H191 sing N N 364 L2P C20 C21 sing N N 365 L2P C20 H202 sing N N 366 L2P C20 H201 sing N N 367 L2P C21 C22 sing N N 368 L2P C21 H212 sing N N 369 L2P C21 H211 sing N N 370 L2P C22 C23 sing N N 371 L2P C22 H222 sing N N 372 L2P C22 H221 sing N N 373 L2P C23 C24 sing N N 374 L2P C23 C25 sing N N 375 L2P C23 H23 sing N N 376 L2P C24 H243 sing N N 377 L2P C24 H242 sing N N 378 L2P C24 H241 sing N N 379 L2P C25 C26 sing N N 380 L2P C25 H252 sing N N 381 L2P C25 H251 sing N N 382 L2P C26 C27 sing N N 383 L2P C26 H262 sing N N 384 L2P C26 H261 sing N N 385 L2P C27 C28 sing N N 386 L2P C27 H272 sing N N 387 L2P C27 H271 sing N N 388 L2P C28 C29 sing N N 389 L2P C28 C30 sing N N 390 L2P C28 H28 sing N N 391 L2P C29 H293 sing N N 392 L2P C29 H292 sing N N 393 L2P C29 H291 sing N N 394 L2P C30 H303 sing N N 395 L2P C30 H302 sing N N 396 L2P C30 H301 sing N N 397 L2P C41 C42 sing N N 398 L2P C41 H412 sing N N 399 L2P C41 H411 sing N N 400 L2P C42 C43 sing N N 401 L2P C42 H422 sing N N 402 L2P C42 H421 sing N N 403 L2P C43 C44 sing N N 404 L2P C43 C45 sing N N 405 L2P C43 H43 sing N N 406 L2P C44 H443 sing N N 407 L2P C44 H442 sing N N 408 L2P C44 H441 sing N N 409 L2P C45 C46 sing N N 410 L2P C45 H452 sing N N 411 L2P C45 H451 sing N N 412 L2P C46 C47 sing N N 413 L2P C46 H462 sing N N 414 L2P C46 H461 sing N N 415 L2P C47 C48 sing N N 416 L2P C47 H472 sing N N 417 L2P C47 H471 sing N N 418 L2P C48 C49 sing N N 419 L2P C48 C50 sing N N 420 L2P C48 H48 sing N N 421 L2P C49 H493 sing N N 422 L2P C49 H492 sing N N 423 L2P C49 H491 sing N N 424 L2P C50 C51 sing N N 425 L2P C50 H502 sing N N 426 L2P C50 H501 sing N N 427 L2P C51 C52 sing N N 428 L2P C51 H512 sing N N 429 L2P C51 H511 sing N N 430 L2P C52 C53 sing N N 431 L2P C52 H522 sing N N 432 L2P C52 H521 sing N N 433 L2P C53 C54 sing N N 434 L2P C53 C55 sing N N 435 L2P C53 H53 sing N N 436 L2P C54 H543 sing N N 437 L2P C54 H542 sing N N 438 L2P C54 H541 sing N N 439 L2P C55 C56 sing N N 440 L2P C55 H552 sing N N 441 L2P C55 H551 sing N N 442 L2P C56 C57 sing N N 443 L2P C56 H562 sing N N 444 L2P C56 H561 sing N N 445 L2P C57 C58 sing N N 446 L2P C57 H572 sing N N 447 L2P C57 H571 sing N N 448 L2P C58 C59 sing N N 449 L2P C58 C60 sing N N 450 L2P C58 H58 sing N N 451 L2P C59 H593 sing N N 452 L2P C59 H592 sing N N 453 L2P C59 H591 sing N N 454 L2P C60 H603 sing N N 455 L2P C60 H602 sing N N 456 L2P C60 H601 sing N N 457 L3P C1 C2 sing N N 458 L3P C1 O1 sing N N 459 L3P C1 H12 sing N N 460 L3P C1 H11 sing N N 461 L3P C2 C3 sing N N 462 L3P C2 O2 sing N N 463 L3P C2 H2 sing N N 464 L3P C3 O3 sing N N 465 L3P C3 H32 sing N N 466 L3P C3 H31 sing N N 467 L3P C4 C5 sing N N 468 L3P C4 O4 sing N N 469 L3P C4 H42 sing N N 470 L3P C4 H41 sing N N 471 L3P C5 C6 sing N N 472 L3P C5 O5 sing N N 473 L3P C5 H5 sing N N 474 L3P C6 O6 sing N N 475 L3P C6 H62 sing N N 476 L3P C6 H61 sing N N 477 L3P O1 C11 sing N N 478 L3P O2 C41 sing N N 479 L3P O3 P1 sing N N 480 L3P O4 P1 sing N N 481 L3P O5 H5O sing N N 482 L3P O6 P2 sing N N 483 L3P O1P P1 doub N N 484 L3P O2P P1 sing N N 485 L3P O4P P2 doub N N 486 L3P O5P P2 sing N N 487 L3P O6P P2 sing N N 488 L3P O6P HOP6 sing N N 489 L3P C11 C12 sing N N 490 L3P C11 H112 sing N N 491 L3P C11 H111 sing N N 492 L3P C12 C13 sing N N 493 L3P C12 H122 sing N N 494 L3P C12 H121 sing N N 495 L3P C13 C14 sing N N 496 L3P C13 C15 sing N N 497 L3P C13 H13 sing N N 498 L3P C14 H143 sing N N 499 L3P C14 H142 sing N N 500 L3P C14 H141 sing N N 501 L3P C15 C16 sing N N 502 L3P C15 H152 sing N N 503 L3P C15 H151 sing N N 504 L3P C16 C17 sing N N 505 L3P C16 H162 sing N N 506 L3P C16 H161 sing N N 507 L3P C17 C18 sing N N 508 L3P C17 H172 sing N N 509 L3P C17 H171 sing N N 510 L3P C18 C19 sing N N 511 L3P C18 C20 sing N N 512 L3P C18 H18 sing N N 513 L3P C19 H193 sing N N 514 L3P C19 H192 sing N N 515 L3P C19 H191 sing N N 516 L3P C20 C21 sing N N 517 L3P C20 H202 sing N N 518 L3P C20 H201 sing N N 519 L3P C21 C22 sing N N 520 L3P C21 H212 sing N N 521 L3P C21 H211 sing N N 522 L3P C22 C23 sing N N 523 L3P C22 H222 sing N N 524 L3P C22 H221 sing N N 525 L3P C23 C24 sing N N 526 L3P C23 C25 sing N N 527 L3P C23 H23 sing N N 528 L3P C24 H243 sing N N 529 L3P C24 H242 sing N N 530 L3P C24 H241 sing N N 531 L3P C25 C26 sing N N 532 L3P C25 H252 sing N N 533 L3P C25 H251 sing N N 534 L3P C26 C27 sing N N 535 L3P C26 H262 sing N N 536 L3P C26 H261 sing N N 537 L3P C27 C28 sing N N 538 L3P C27 H272 sing N N 539 L3P C27 H271 sing N N 540 L3P C28 C29 sing N N 541 L3P C28 C30 sing N N 542 L3P C28 H28 sing N N 543 L3P C29 H293 sing N N 544 L3P C29 H292 sing N N 545 L3P C29 H291 sing N N 546 L3P C30 H303 sing N N 547 L3P C30 H302 sing N N 548 L3P C30 H301 sing N N 549 L3P C41 C42 sing N N 550 L3P C41 H412 sing N N 551 L3P C41 H411 sing N N 552 L3P C42 C43 sing N N 553 L3P C42 H422 sing N N 554 L3P C42 H421 sing N N 555 L3P C43 C44 sing N N 556 L3P C43 C45 sing N N 557 L3P C43 H43 sing N N 558 L3P C44 H443 sing N N 559 L3P C44 H442 sing N N 560 L3P C44 H441 sing N N 561 L3P C45 C46 sing N N 562 L3P C45 H452 sing N N 563 L3P C45 H451 sing N N 564 L3P C46 C47 sing N N 565 L3P C46 H462 sing N N 566 L3P C46 H461 sing N N 567 L3P C47 C48 sing N N 568 L3P C47 H472 sing N N 569 L3P C47 H471 sing N N 570 L3P C48 C49 sing N N 571 L3P C48 C50 sing N N 572 L3P C48 H48 sing N N 573 L3P C49 H493 sing N N 574 L3P C49 H492 sing N N 575 L3P C49 H491 sing N N 576 L3P C50 C51 sing N N 577 L3P C50 H502 sing N N 578 L3P C50 H501 sing N N 579 L3P C51 C52 sing N N 580 L3P C51 H512 sing N N 581 L3P C51 H511 sing N N 582 L3P C52 C53 sing N N 583 L3P C52 H522 sing N N 584 L3P C52 H521 sing N N 585 L3P C53 C54 sing N N 586 L3P C53 C55 sing N N 587 L3P C53 H53 sing N N 588 L3P C54 H543 sing N N 589 L3P C54 H542 sing N N 590 L3P C54 H541 sing N N 591 L3P C55 C56 sing N N 592 L3P C55 H552 sing N N 593 L3P C55 H551 sing N N 594 L3P C56 C57 sing N N 595 L3P C56 H562 sing N N 596 L3P C56 H561 sing N N 597 L3P C57 C58 sing N N 598 L3P C57 H572 sing N N 599 L3P C57 H571 sing N N 600 L3P C58 C59 sing N N 601 L3P C58 C60 sing N N 602 L3P C58 H58 sing N N 603 L3P C59 H593 sing N N 604 L3P C59 H592 sing N N 605 L3P C59 H591 sing N N 606 L3P C60 H603 sing N N 607 L3P C60 H602 sing N N 608 L3P C60 H601 sing N N 609 L4P C1 C2 sing N N 610 L4P C1 O1 sing N N 611 L4P C1 H12 sing N N 612 L4P C1 H11 sing N N 613 L4P C2 C3 sing N N 614 L4P C2 O2 sing N N 615 L4P C2 H2 sing N N 616 L4P C3 O3 sing N N 617 L4P C3 H32 sing N N 618 L4P C3 H31 sing N N 619 L4P C4 C5 sing N N 620 L4P C4 O4 sing N N 621 L4P C4 H42 sing N N 622 L4P C4 H41 sing N N 623 L4P C5 C6 sing N N 624 L4P C5 O5 sing N N 625 L4P C5 H5 sing N N 626 L4P C6 O6 sing N N 627 L4P C6 H62 sing N N 628 L4P C6 H61 sing N N 629 L4P O1 C11 sing N N 630 L4P O2 C41 sing N N 631 L4P O3 P1 sing N N 632 L4P O4 P1 sing N N 633 L4P O5 H5O sing N N 634 L4P O6 H6O sing N N 635 L4P O1P P1 doub N N 636 L4P O2P P1 sing N N 637 L4P O2P HOP2 sing N N 638 L4P C11 C12 sing N N 639 L4P C11 H112 sing N N 640 L4P C11 H111 sing N N 641 L4P C12 C13 sing N N 642 L4P C12 H122 sing N N 643 L4P C12 H121 sing N N 644 L4P C13 C14 sing N N 645 L4P C13 C15 sing N N 646 L4P C13 H13 sing N N 647 L4P C14 H143 sing N N 648 L4P C14 H142 sing N N 649 L4P C14 H141 sing N N 650 L4P C15 C16 sing N N 651 L4P C15 H152 sing N N 652 L4P C15 H151 sing N N 653 L4P C16 C17 sing N N 654 L4P C16 H162 sing N N 655 L4P C16 H161 sing N N 656 L4P C17 C18 sing N N 657 L4P C17 H172 sing N N 658 L4P C17 H171 sing N N 659 L4P C18 C19 sing N N 660 L4P C18 C20 sing N N 661 L4P C18 H18 sing N N 662 L4P C19 H193 sing N N 663 L4P C19 H192 sing N N 664 L4P C19 H191 sing N N 665 L4P C20 C21 sing N N 666 L4P C20 H202 sing N N 667 L4P C20 H201 sing N N 668 L4P C21 C22 sing N N 669 L4P C21 H212 sing N N 670 L4P C21 H211 sing N N 671 L4P C22 C23 sing N N 672 L4P C22 H222 sing N N 673 L4P C22 H221 sing N N 674 L4P C23 C24 sing N N 675 L4P C23 C25 sing N N 676 L4P C23 H23 sing N N 677 L4P C24 H243 sing N N 678 L4P C24 H242 sing N N 679 L4P C24 H241 sing N N 680 L4P C25 C26 sing N N 681 L4P C25 H252 sing N N 682 L4P C25 H251 sing N N 683 L4P C26 C27 sing N N 684 L4P C26 H262 sing N N 685 L4P C26 H261 sing N N 686 L4P C27 C28 sing N N 687 L4P C27 H272 sing N N 688 L4P C27 H271 sing N N 689 L4P C28 C29 sing N N 690 L4P C28 C30 sing N N 691 L4P C28 H28 sing N N 692 L4P C29 H293 sing N N 693 L4P C29 H292 sing N N 694 L4P C29 H291 sing N N 695 L4P C30 H303 sing N N 696 L4P C30 H302 sing N N 697 L4P C30 H301 sing N N 698 L4P C41 C42 sing N N 699 L4P C41 H412 sing N N 700 L4P C41 H411 sing N N 701 L4P C42 C43 sing N N 702 L4P C42 H422 sing N N 703 L4P C42 H421 sing N N 704 L4P C43 C44 sing N N 705 L4P C43 C45 sing N N 706 L4P C43 H43 sing N N 707 L4P C44 H443 sing N N 708 L4P C44 H442 sing N N 709 L4P C44 H441 sing N N 710 L4P C45 C46 sing N N 711 L4P C45 H452 sing N N 712 L4P C45 H451 sing N N 713 L4P C46 C47 sing N N 714 L4P C46 H462 sing N N 715 L4P C46 H461 sing N N 716 L4P C47 C48 sing N N 717 L4P C47 H472 sing N N 718 L4P C47 H471 sing N N 719 L4P C48 C49 sing N N 720 L4P C48 C50 sing N N 721 L4P C48 H48 sing N N 722 L4P C49 H493 sing N N 723 L4P C49 H492 sing N N 724 L4P C49 H491 sing N N 725 L4P C50 C51 sing N N 726 L4P C50 H502 sing N N 727 L4P C50 H501 sing N N 728 L4P C51 C52 sing N N 729 L4P C51 H512 sing N N 730 L4P C51 H511 sing N N 731 L4P C52 C53 sing N N 732 L4P C52 H522 sing N N 733 L4P C52 H521 sing N N 734 L4P C53 C54 sing N N 735 L4P C53 C55 sing N N 736 L4P C53 H53 sing N N 737 L4P C54 H543 sing N N 738 L4P C54 H542 sing N N 739 L4P C54 H541 sing N N 740 L4P C55 C56 sing N N 741 L4P C55 H552 sing N N 742 L4P C55 H551 sing N N 743 L4P C56 C57 sing N N 744 L4P C56 H562 sing N N 745 L4P C56 H561 sing N N 746 L4P C57 C58 sing N N 747 L4P C57 H572 sing N N 748 L4P C57 H571 sing N N 749 L4P C58 C59 sing N N 750 L4P C58 C60 sing N N 751 L4P C58 H58 sing N N 752 L4P C59 H593 sing N N 753 L4P C59 H592 sing N N 754 L4P C59 H591 sing N N 755 L4P C60 H603 sing N N 756 L4P C60 H602 sing N N 757 L4P C60 H601 sing N N 758 LEU N CA sing N N 759 LEU N H sing N N 760 LEU N H2 sing N N 761 LEU CA C sing N N 762 LEU CA CB sing N N 763 LEU CA HA sing N N 764 LEU C O doub N N 765 LEU C OXT sing N N 766 LEU CB CG sing N N 767 LEU CB HB2 sing N N 768 LEU CB HB3 sing N N 769 LEU CG CD1 sing N N 770 LEU CG CD2 sing N N 771 LEU CG HG sing N N 772 LEU CD1 HD11 sing N N 773 LEU CD1 HD12 sing N N 774 LEU CD1 HD13 sing N N 775 LEU CD2 HD21 sing N N 776 LEU CD2 HD22 sing N N 777 LEU CD2 HD23 sing N N 778 LEU OXT HXT sing N N 779 LYS N CA sing N N 780 LYS N H sing N N 781 LYS N H2 sing N N 782 LYS CA C sing N N 783 LYS CA CB sing N N 784 LYS CA HA sing N N 785 LYS C O doub N N 786 LYS C OXT sing N N 787 LYS CB CG sing N N 788 LYS CB HB2 sing N N 789 LYS CB HB3 sing N N 790 LYS CG CD sing N N 791 LYS CG HG2 sing N N 792 LYS CG HG3 sing N N 793 LYS CD CE sing N N 794 LYS CD HD2 sing N N 795 LYS CD HD3 sing N N 796 LYS CE NZ sing N N 797 LYS CE HE2 sing N N 798 LYS CE HE3 sing N N 799 LYS NZ HZ1 sing N N 800 LYS NZ HZ2 sing N N 801 LYS NZ HZ3 sing N N 802 LYS OXT HXT sing N N 803 MAN C1 C2 sing N N 804 MAN C1 O1 sing N N 805 MAN C1 O5 sing N N 806 MAN C1 H1 sing N N 807 MAN C2 C3 sing N N 808 MAN C2 O2 sing N N 809 MAN C2 H2 sing N N 810 MAN C3 C4 sing N N 811 MAN C3 O3 sing N N 812 MAN C3 H3 sing N N 813 MAN C4 C5 sing N N 814 MAN C4 O4 sing N N 815 MAN C4 H4 sing N N 816 MAN C5 C6 sing N N 817 MAN C5 O5 sing N N 818 MAN C5 H5 sing N N 819 MAN C6 O6 sing N N 820 MAN C6 H61 sing N N 821 MAN C6 H62 sing N N 822 MAN O1 HO1 sing N N 823 MAN O2 HO2 sing N N 824 MAN O3 HO3 sing N N 825 MAN O4 HO4 sing N N 826 MAN O6 HO6 sing N N 827 MET N CA sing N N 828 MET N H sing N N 829 MET N H2 sing N N 830 MET CA C sing N N 831 MET CA CB sing N N 832 MET CA HA sing N N 833 MET C O doub N N 834 MET C OXT sing N N 835 MET CB CG sing N N 836 MET CB HB2 sing N N 837 MET CB HB3 sing N N 838 MET CG SD sing N N 839 MET CG HG2 sing N N 840 MET CG HG3 sing N N 841 MET SD CE sing N N 842 MET CE HE1 sing N N 843 MET CE HE2 sing N N 844 MET CE HE3 sing N N 845 MET OXT HXT sing N N 846 PHE N CA sing N N 847 PHE N H sing N N 848 PHE N H2 sing N N 849 PHE CA C sing N N 850 PHE CA CB sing N N 851 PHE CA HA sing N N 852 PHE C O doub N N 853 PHE C OXT sing N N 854 PHE CB CG sing N N 855 PHE CB HB2 sing N N 856 PHE CB HB3 sing N N 857 PHE CG CD1 doub Y N 858 PHE CG CD2 sing Y N 859 PHE CD1 CE1 sing Y N 860 PHE CD1 HD1 sing N N 861 PHE CD2 CE2 doub Y N 862 PHE CD2 HD2 sing N N 863 PHE CE1 CZ doub Y N 864 PHE CE1 HE1 sing N N 865 PHE CE2 CZ sing Y N 866 PHE CE2 HE2 sing N N 867 PHE CZ HZ sing N N 868 PHE OXT HXT sing N N 869 PRO N CA sing N N 870 PRO N CD sing N N 871 PRO N H sing N N 872 PRO CA C sing N N 873 PRO CA CB sing N N 874 PRO CA HA sing N N 875 PRO C O doub N N 876 PRO C OXT sing N N 877 PRO CB CG sing N N 878 PRO CB HB2 sing N N 879 PRO CB HB3 sing N N 880 PRO CG CD sing N N 881 PRO CG HG2 sing N N 882 PRO CG HG3 sing N N 883 PRO CD HD2 sing N N 884 PRO CD HD3 sing N N 885 PRO OXT HXT sing N N 886 RET C1 C2 sing N N 887 RET C1 C6 sing N N 888 RET C1 C16 sing N N 889 RET C1 C17 sing N N 890 RET C2 C3 sing N N 891 RET C2 H21 sing N N 892 RET C2 H22 sing N N 893 RET C3 C4 sing N N 894 RET C3 H31 sing N N 895 RET C3 H32 sing N N 896 RET C4 C5 sing N N 897 RET C4 H41 sing N N 898 RET C4 H42 sing N N 899 RET C5 C6 doub N N 900 RET C5 C18 sing N N 901 RET C6 C7 sing N N 902 RET C7 C8 doub N E 903 RET C7 H7 sing N N 904 RET C8 C9 sing N N 905 RET C8 H8 sing N N 906 RET C9 C10 doub N E 907 RET C9 C19 sing N N 908 RET C10 C11 sing N N 909 RET C10 H10 sing N N 910 RET C11 C12 doub N E 911 RET C11 H11 sing N N 912 RET C12 C13 sing N N 913 RET C12 H12 sing N N 914 RET C13 C14 doub N E 915 RET C13 C20 sing N N 916 RET C14 C15 sing N N 917 RET C14 H14 sing N N 918 RET C15 O1 doub N N 919 RET C15 H15 sing N N 920 RET C16 H161 sing N N 921 RET C16 H162 sing N N 922 RET C16 H163 sing N N 923 RET C17 H171 sing N N 924 RET C17 H172 sing N N 925 RET C17 H173 sing N N 926 RET C18 H181 sing N N 927 RET C18 H182 sing N N 928 RET C18 H183 sing N N 929 RET C19 H191 sing N N 930 RET C19 H192 sing N N 931 RET C19 H193 sing N N 932 RET C20 H201 sing N N 933 RET C20 H202 sing N N 934 RET C20 H203 sing N N 935 SER N CA sing N N 936 SER N H sing N N 937 SER N H2 sing N N 938 SER CA C sing N N 939 SER CA CB sing N N 940 SER CA HA sing N N 941 SER C O doub N N 942 SER C OXT sing N N 943 SER CB OG sing N N 944 SER CB HB2 sing N N 945 SER CB HB3 sing N N 946 SER OG HG sing N N 947 SER OXT HXT sing N N 948 THR N CA sing N N 949 THR N H sing N N 950 THR N H2 sing N N 951 THR CA C sing N N 952 THR CA CB sing N N 953 THR CA HA sing N N 954 THR C O doub N N 955 THR C OXT sing N N 956 THR CB OG1 sing N N 957 THR CB CG2 sing N N 958 THR CB HB sing N N 959 THR OG1 HG1 sing N N 960 THR CG2 HG21 sing N N 961 THR CG2 HG22 sing N N 962 THR CG2 HG23 sing N N 963 THR OXT HXT sing N N 964 TRP N CA sing N N 965 TRP N H sing N N 966 TRP N H2 sing N N 967 TRP CA C sing N N 968 TRP CA CB sing N N 969 TRP CA HA sing N N 970 TRP C O doub N N 971 TRP C OXT sing N N 972 TRP CB CG sing N N 973 TRP CB HB2 sing N N 974 TRP CB HB3 sing N N 975 TRP CG CD1 doub Y N 976 TRP CG CD2 sing Y N 977 TRP CD1 NE1 sing Y N 978 TRP CD1 HD1 sing N N 979 TRP CD2 CE2 doub Y N 980 TRP CD2 CE3 sing Y N 981 TRP NE1 CE2 sing Y N 982 TRP NE1 HE1 sing N N 983 TRP CE2 CZ2 sing Y N 984 TRP CE3 CZ3 doub Y N 985 TRP CE3 HE3 sing N N 986 TRP CZ2 CH2 doub Y N 987 TRP CZ2 HZ2 sing N N 988 TRP CZ3 CH2 sing Y N 989 TRP CZ3 HZ3 sing N N 990 TRP CH2 HH2 sing N N 991 TRP OXT HXT sing N N 992 TYR N CA sing N N 993 TYR N H sing N N 994 TYR N H2 sing N N 995 TYR CA C sing N N 996 TYR CA CB sing N N 997 TYR CA HA sing N N 998 TYR C O doub N N 999 TYR C OXT sing N N 1000 TYR CB CG sing N N 1001 TYR CB HB2 sing N N 1002 TYR CB HB3 sing N N 1003 TYR CG CD1 doub Y N 1004 TYR CG CD2 sing Y N 1005 TYR CD1 CE1 sing Y N 1006 TYR CD1 HD1 sing N N 1007 TYR CD2 CE2 doub Y N 1008 TYR CD2 HD2 sing N N 1009 TYR CE1 CZ doub Y N 1010 TYR CE1 HE1 sing N N 1011 TYR CE2 CZ sing Y N 1012 TYR CE2 HE2 sing N N 1013 TYR CZ OH sing N N 1014 TYR OH HH sing N N 1015 TYR OXT HXT sing N N 1016 VAL N CA sing N N 1017 VAL N H sing N N 1018 VAL N H2 sing N N 1019 VAL CA C sing N N 1020 VAL CA CB sing N N 1021 VAL CA HA sing N N 1022 VAL C O doub N N 1023 VAL C OXT sing N N 1024 VAL CB CG1 sing N N 1025 VAL CB CG2 sing N N 1026 VAL CB HB sing N N 1027 VAL CG1 HG11 sing N N 1028 VAL CG1 HG12 sing N N 1029 VAL CG1 HG13 sing N N 1030 VAL CG2 HG21 sing N N 1031 VAL CG2 HG22 sing N N 1032 VAL CG2 HG23 sing N N 1033 VAL OXT HXT sing N N 1034 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 GLC 1 B GLC 1 A GLC 400 n B 2 MAN 2 B MAN 2 A MAN 410 n B 2 GAL 3 B GAL 3 A GAL 420 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier GAL 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpb GAL 'COMMON NAME' GMML 1.0 b-D-galactopyranose GAL 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Galp GAL 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Gal GLC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpa GLC 'COMMON NAME' GMML 1.0 a-D-glucopyranose GLC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Glcp GLC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Glc MAN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpa MAN 'COMMON NAME' GMML 1.0 a-D-mannopyranose MAN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Manp MAN 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DGalpb1-6DManpa1-2DGlcpa1-ROH 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/3,3,2/[a2122h-1a_1-5][a1122h-1a_1-5][a2112h-1b_1-5]/1-2-3/a2-b1_b6-c1' WURCS PDB2Glycan 1.1.0 3 2 '[][D-1-deoxy-Glcp]{[(2+1)][a-D-Manp]{[(6+1)][b-D-Galp]{}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 2 2 MAN C1 O1 1 GLC O2 HO2 sing ? 2 2 3 GAL C1 O1 2 MAN O6 HO6 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 GLC 1 n 2 MAN 2 n 2 GAL 3 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 RETINAL RET 4 '3-PHOSPHORYL-[1,2-DI-PHYTANYL]GLYCEROL' L1P 5 2,3-DI-PHYTANYL-GLYCEROL L2P 6 "2,3-DI-O-PHYTANLY-3-SN-GLYCERO-1-PHOSPHORYL-3'-SN-GLYCEROL-1'-PHOSPHATE" L3P 7 '3-[GLYCEROLYLPHOSPHONYL]-[1,2-DI-PHYTANYL]GLYCEROL' L4P 8 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1QM8 _pdbx_initial_refinement_model.details 'PDB ENTRY 1QM8' #