data_1EU6 # _entry.id 1EU6 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.355 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1EU6 pdb_00001eu6 10.2210/pdb1eu6/pdb RCSB RCSB010893 ? ? WWPDB D_1000010893 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1EU2 'dimeric structure of cyclic d(TGCTCGCT)' unspecified BMRB 4687 '1H assigments of the dimeric form of cyclic d(TGCTCGCT)' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1EU6 _pdbx_database_status.recvd_initial_deposition_date 2000-04-14 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Escaja, N.' 1 'Pedroso, E.' 2 'Rico, M.' 3 'Gonzalez, C.' 4 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Dimeric Solution Structure of Two Cyclic Octamers: Four-Stranded DNA Structures Stabilized by A:T:A:T and G:C:G:C' J.Am.Chem.Soc. 122 12732 12742 2000 JACSAT US 0002-7863 0004 ? -1 10.1021/ja002778q 1 'NMR Structure of Two Cyclic Oligonucleotides. A Monomer Dimer Equilibrium between DumbellL and Quadruplex Structures' J.Am.Chem.Soc. 120 2176 2177 1998 JACSAT US 0002-7863 0004 JACSAT ? 10.1021/ja973691g # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Escaja, N.' 1 ? primary 'Pedroso, E.' 2 ? primary 'Rico, M.' 3 ? primary 'Gonzalez, C.' 4 ? 1 'Gonzalez, C.' 5 ? 1 'Escaja, N.' 6 ? 1 'Rico, M.' 7 ? 1 'Pedroso, E.' 8 ? # _cell.entry_id 1EU6 _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1EU6 _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description 'CYCLIC OLIGONUCLEOTIDE D(CATTCATT)' _entity.formula_weight 2376.591 _entity.pdbx_number_of_molecules 2 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DC)(DA)(DT)(DT)(DC)(DA)(DT)(DT)' _entity_poly.pdbx_seq_one_letter_code_can CATTCATT _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DA n 1 3 DT n 1 4 DT n 1 5 DC n 1 6 DA n 1 7 DT n 1 8 DT n # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 1EU6 _struct_ref.pdbx_db_accession 1EU6 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1EU6 A 1 ? 8 ? 1EU6 1 ? 8 ? 1 8 2 1 1EU6 B 1 ? 8 ? 1EU6 1 ? 8 ? 1 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D NOESY' 2 1 1 DQF-COSY 3 1 1 ROESY 4 1 1 TOCSY # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 293 _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 0.01 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '20mM oligonucleotide concentration, 25mM buffer phosphate' _pdbx_nmr_sample_details.solvent_system 'either 100% D2O or 90% H2O 10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.model AMX _pdbx_nmr_spectrometer.field_strength 600 # _pdbx_nmr_refine.entry_id 1EU6 _pdbx_nmr_refine.method 'relaxation matrix, restrained molecular dynamics' _pdbx_nmr_refine.details 'see reference' _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 1EU6 _pdbx_nmr_ensemble.conformers_calculated_total_number 10 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.conformer_selection_criteria 'all calculated structures submitted' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # loop_ _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.classification _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal XwinNMR 1.3 collection Bruker 1 XEASY 1.0 'data analysis' 'Bartels et al.' 2 DYANA 1.5 'structure solution' 'P. Guntert et al.' 3 MARDIGRAS 4.0 'structure solution' 'T.L. James' 4 DYANA 1.5 refinement 'P. Guntert et al.' 5 Amber 4.1 refinement 'D. Pearlman' 6 # _exptl.entry_id 1EU6 _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 1EU6 _struct.title 'DIMERIC SOLUTION STRUCTURE OF THE CYCLIC OCTAMER CD(CATTCATT)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1EU6 _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'QUADRUPLEX, FOUR-STRANDED structure, UNUSUAL DNA, BI-LOOP, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A DC 1 P ? ? ? 1_555 A DT 8 "O3'" ? ? A DC 1 A DT 8 1_555 ? ? ? ? ? ? ? 1.592 ? ? covale2 covale both ? B DC 1 P ? ? ? 1_555 B DT 8 "O3'" ? ? B DC 1 B DT 8 1_555 ? ? ? ? ? ? ? 1.593 ? ? hydrog1 hydrog ? ? A DA 2 N1 ? ? ? 1_555 B DT 3 N3 ? ? A DA 2 B DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DA 2 N6 ? ? ? 1_555 B DT 3 O4 ? ? A DA 2 B DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DT 3 N3 ? ? ? 1_555 B DA 2 N1 ? ? A DT 3 B DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DT 3 O4 ? ? ? 1_555 B DA 2 N6 ? ? A DT 3 B DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DA 6 N1 ? ? ? 1_555 B DT 7 N3 ? ? A DA 6 B DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DA 6 N6 ? ? ? 1_555 B DT 7 O4 ? ? A DA 6 B DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DT 7 N3 ? ? ? 1_555 B DA 6 N1 ? ? A DT 7 B DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DT 7 O4 ? ? ? 1_555 B DA 6 N6 ? ? A DT 7 B DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # _database_PDB_matrix.entry_id 1EU6 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1EU6 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC C A . n A 1 2 DA 2 2 2 DA A A . n A 1 3 DT 3 3 3 DT T A . n A 1 4 DT 4 4 4 DT T A . n A 1 5 DC 5 5 5 DC C A . n A 1 6 DA 6 6 6 DA A A . n A 1 7 DT 7 7 7 DT T A . n A 1 8 DT 8 8 8 DT T A . n B 1 1 DC 1 1 1 DC C B . n B 1 2 DA 2 2 2 DA A B . n B 1 3 DT 3 3 3 DT T B . n B 1 4 DT 4 4 4 DT T B . n B 1 5 DC 5 5 5 DC C B . n B 1 6 DA 6 6 6 DA A B . n B 1 7 DT 7 7 7 DT T B . n B 1 8 DT 8 8 8 DT T B . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2001-01-24 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-02-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_struct_assembly 4 4 'Structure model' pdbx_struct_oper_list 5 4 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 5 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 6 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 7 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 8 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 9 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 10 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 11 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 12 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 13 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 14 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 6 "C5'" A DT 8 ? ? "C4'" A DT 8 ? ? 1.558 1.512 0.046 0.007 N 2 8 "C5'" A DT 4 ? ? "C4'" A DT 4 ? ? 1.559 1.512 0.047 0.007 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O3'" A DC 1 ? ? P A DA 2 ? ? "O5'" A DA 2 ? ? 89.45 104.00 -14.55 1.90 Y 2 1 "O4'" A DA 2 ? ? "C1'" A DA 2 ? ? N9 A DA 2 ? ? 116.02 108.30 7.72 0.30 N 3 1 "O4'" A DT 3 ? ? "C1'" A DT 3 ? ? N1 A DT 3 ? ? 110.12 108.30 1.82 0.30 N 4 1 C6 A DT 3 ? ? C5 A DT 3 ? ? C7 A DT 3 ? ? 117.24 122.90 -5.66 0.60 N 5 1 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 111.76 108.30 3.46 0.30 N 6 1 "O4'" A DA 6 ? ? "C1'" A DA 6 ? ? "C2'" A DA 6 ? ? 110.26 106.80 3.46 0.50 N 7 1 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 117.22 122.90 -5.68 0.60 N 8 1 C6 A DT 8 ? ? C5 A DT 8 ? ? C7 A DT 8 ? ? 119.20 122.90 -3.70 0.60 N 9 1 "O4'" B DA 2 ? ? "C1'" B DA 2 ? ? N9 B DA 2 ? ? 117.80 108.30 9.50 0.30 N 10 1 "O4'" B DT 3 ? ? "C1'" B DT 3 ? ? N1 B DT 3 ? ? 110.58 108.30 2.28 0.30 N 11 1 C4 B DT 3 ? ? C5 B DT 3 ? ? C7 B DT 3 ? ? 122.70 119.00 3.70 0.60 N 12 1 C6 B DT 3 ? ? C5 B DT 3 ? ? C7 B DT 3 ? ? 117.12 122.90 -5.78 0.60 N 13 1 "O4'" B DT 4 ? ? "C1'" B DT 4 ? ? N1 B DT 4 ? ? 111.10 108.30 2.80 0.30 N 14 1 C6 B DT 4 ? ? C5 B DT 4 ? ? C7 B DT 4 ? ? 119.25 122.90 -3.65 0.60 N 15 1 "O4'" B DA 6 ? ? "C1'" B DA 6 ? ? "C2'" B DA 6 ? ? 110.53 106.80 3.73 0.50 N 16 1 "O4'" B DA 6 ? ? "C1'" B DA 6 ? ? N9 B DA 6 ? ? 113.08 108.30 4.78 0.30 N 17 1 C4 B DA 6 ? ? C5 B DA 6 ? ? C6 B DA 6 ? ? 113.90 117.00 -3.10 0.50 N 18 1 "O4'" B DT 7 ? ? "C1'" B DT 7 ? ? N1 B DT 7 ? ? 110.24 108.30 1.94 0.30 N 19 1 C4 B DT 7 ? ? C5 B DT 7 ? ? C7 B DT 7 ? ? 122.61 119.00 3.61 0.60 N 20 1 C6 B DT 7 ? ? C5 B DT 7 ? ? C7 B DT 7 ? ? 117.22 122.90 -5.68 0.60 N 21 2 "O4'" A DA 2 ? ? "C1'" A DA 2 ? ? "C2'" A DA 2 ? ? 109.89 106.80 3.09 0.50 N 22 2 C4 A DA 2 ? ? C5 A DA 2 ? ? C6 A DA 2 ? ? 113.71 117.00 -3.29 0.50 N 23 2 "O4'" A DT 3 ? ? "C1'" A DT 3 ? ? N1 A DT 3 ? ? 111.05 108.30 2.75 0.30 N 24 2 C6 A DT 3 ? ? C5 A DT 3 ? ? C7 A DT 3 ? ? 117.65 122.90 -5.25 0.60 N 25 2 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 110.87 108.30 2.57 0.30 N 26 2 "O4'" A DA 6 ? ? "C1'" A DA 6 ? ? "C2'" A DA 6 ? ? 110.43 106.80 3.63 0.50 N 27 2 C4 A DA 6 ? ? C5 A DA 6 ? ? C6 A DA 6 ? ? 113.54 117.00 -3.46 0.50 N 28 2 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 111.06 108.30 2.76 0.30 N 29 2 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 118.04 122.90 -4.86 0.60 N 30 2 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 110.85 108.30 2.55 0.30 N 31 2 "O4'" B DA 2 ? ? "C1'" B DA 2 ? ? "C2'" B DA 2 ? ? 110.32 106.80 3.52 0.50 N 32 2 "O4'" B DA 2 ? ? "C1'" B DA 2 ? ? N9 B DA 2 ? ? 110.79 108.30 2.49 0.30 N 33 2 "O4'" B DT 3 ? ? "C1'" B DT 3 ? ? N1 B DT 3 ? ? 110.40 108.30 2.10 0.30 N 34 2 C6 B DT 3 ? ? C5 B DT 3 ? ? C7 B DT 3 ? ? 117.21 122.90 -5.69 0.60 N 35 2 "O4'" B DT 4 ? ? "C1'" B DT 4 ? ? N1 B DT 4 ? ? 112.31 108.30 4.01 0.30 N 36 2 "O4'" B DA 6 ? ? "C1'" B DA 6 ? ? "C2'" B DA 6 ? ? 109.95 106.80 3.15 0.50 N 37 2 "O4'" B DA 6 ? ? "C1'" B DA 6 ? ? N9 B DA 6 ? ? 111.56 108.30 3.26 0.30 N 38 2 C6 B DT 7 ? ? C5 B DT 7 ? ? C7 B DT 7 ? ? 117.58 122.90 -5.32 0.60 N 39 2 "O4'" B DT 8 ? ? "C1'" B DT 8 ? ? N1 B DT 8 ? ? 111.74 108.30 3.44 0.30 N 40 3 "O3'" A DC 1 ? ? P A DA 2 ? ? "O5'" A DA 2 ? ? 92.16 104.00 -11.84 1.90 Y 41 3 "O4'" A DA 2 ? ? "C1'" A DA 2 ? ? N9 A DA 2 ? ? 112.37 108.30 4.07 0.30 N 42 3 "O4'" A DT 3 ? ? "C1'" A DT 3 ? ? N1 A DT 3 ? ? 111.45 108.30 3.15 0.30 N 43 3 C6 A DT 3 ? ? C5 A DT 3 ? ? C7 A DT 3 ? ? 117.34 122.90 -5.56 0.60 N 44 3 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 112.82 108.30 4.52 0.30 N 45 3 "O4'" A DA 6 ? ? "C1'" A DA 6 ? ? "C2'" A DA 6 ? ? 110.58 106.80 3.78 0.50 N 46 3 "O4'" A DA 6 ? ? "C1'" A DA 6 ? ? N9 A DA 6 ? ? 110.22 108.30 1.92 0.30 N 47 3 C4 A DA 6 ? ? C5 A DA 6 ? ? C6 A DA 6 ? ? 113.82 117.00 -3.18 0.50 N 48 3 C4 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 122.63 119.00 3.63 0.60 N 49 3 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 117.15 122.90 -5.75 0.60 N 50 3 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 110.16 108.30 1.86 0.30 N 51 3 "C4'" B DC 1 ? ? "C3'" B DC 1 ? ? "O3'" B DC 1 ? ? 125.39 112.30 13.09 2.00 N 52 3 "O4'" B DA 2 ? ? "C1'" B DA 2 ? ? N9 B DA 2 ? ? 114.00 108.30 5.70 0.30 N 53 3 "O4'" B DT 3 ? ? "C1'" B DT 3 ? ? N1 B DT 3 ? ? 110.40 108.30 2.10 0.30 N 54 3 C6 B DT 3 ? ? C5 B DT 3 ? ? C7 B DT 3 ? ? 117.44 122.90 -5.46 0.60 N 55 3 "O4'" B DT 4 ? ? "C1'" B DT 4 ? ? N1 B DT 4 ? ? 112.70 108.30 4.40 0.30 N 56 3 "O4'" B DA 6 ? ? "C1'" B DA 6 ? ? N9 B DA 6 ? ? 110.48 108.30 2.18 0.30 N 57 3 C6 B DT 7 ? ? C5 B DT 7 ? ? C7 B DT 7 ? ? 117.40 122.90 -5.50 0.60 N 58 3 "O4'" B DT 8 ? ? "C1'" B DT 8 ? ? N1 B DT 8 ? ? 111.19 108.30 2.89 0.30 N 59 4 "O4'" A DA 2 ? ? "C1'" A DA 2 ? ? "C2'" A DA 2 ? ? 110.34 106.80 3.54 0.50 N 60 4 "O4'" A DA 2 ? ? "C1'" A DA 2 ? ? N9 A DA 2 ? ? 111.07 108.30 2.77 0.30 N 61 4 "O4'" A DT 3 ? ? "C1'" A DT 3 ? ? N1 A DT 3 ? ? 110.35 108.30 2.05 0.30 N 62 4 C6 A DT 3 ? ? C5 A DT 3 ? ? C7 A DT 3 ? ? 117.45 122.90 -5.45 0.60 N 63 4 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 111.84 108.30 3.54 0.30 N 64 4 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 119.09 122.90 -3.81 0.60 N 65 4 "O4'" A DA 6 ? ? "C1'" A DA 6 ? ? N9 A DA 6 ? ? 110.95 108.30 2.65 0.30 N 66 4 C4 A DA 6 ? ? C5 A DA 6 ? ? C6 A DA 6 ? ? 113.83 117.00 -3.17 0.50 N 67 4 C4 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 122.65 119.00 3.65 0.60 N 68 4 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 117.32 122.90 -5.58 0.60 N 69 4 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 110.69 108.30 2.39 0.30 N 70 4 "O4'" B DA 2 ? ? "C1'" B DA 2 ? ? "C2'" B DA 2 ? ? 110.74 106.80 3.94 0.50 N 71 4 C4 B DA 2 ? ? C5 B DA 2 ? ? C6 B DA 2 ? ? 113.85 117.00 -3.15 0.50 N 72 4 "O4'" B DT 3 ? ? "C1'" B DT 3 ? ? N1 B DT 3 ? ? 111.25 108.30 2.95 0.30 N 73 4 C6 B DT 3 ? ? C5 B DT 3 ? ? C7 B DT 3 ? ? 117.58 122.90 -5.32 0.60 N 74 4 "O4'" B DT 4 ? ? "C1'" B DT 4 ? ? N1 B DT 4 ? ? 110.99 108.30 2.69 0.30 N 75 4 C6 B DT 4 ? ? C5 B DT 4 ? ? C7 B DT 4 ? ? 119.20 122.90 -3.70 0.60 N 76 4 C4 B DA 6 ? ? C5 B DA 6 ? ? C6 B DA 6 ? ? 113.79 117.00 -3.21 0.50 N 77 4 C6 B DT 7 ? ? C5 B DT 7 ? ? C7 B DT 7 ? ? 117.49 122.90 -5.41 0.60 N 78 4 "O4'" B DT 8 ? ? "C1'" B DT 8 ? ? N1 B DT 8 ? ? 111.74 108.30 3.44 0.30 N 79 5 "O4'" A DA 2 ? ? "C1'" A DA 2 ? ? N9 A DA 2 ? ? 111.19 108.30 2.89 0.30 N 80 5 C4 A DA 2 ? ? C5 A DA 2 ? ? C6 A DA 2 ? ? 113.59 117.00 -3.41 0.50 N 81 5 C4 A DT 3 ? ? C5 A DT 3 ? ? C7 A DT 3 ? ? 123.05 119.00 4.05 0.60 N 82 5 C6 A DT 3 ? ? C5 A DT 3 ? ? C7 A DT 3 ? ? 116.89 122.90 -6.01 0.60 N 83 5 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 111.36 108.30 3.06 0.30 N 84 5 "O4'" A DA 6 ? ? "C1'" A DA 6 ? ? "C2'" A DA 6 ? ? 110.23 106.80 3.43 0.50 N 85 5 "O4'" A DA 6 ? ? "C1'" A DA 6 ? ? N9 A DA 6 ? ? 112.08 108.30 3.78 0.30 N 86 5 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 117.43 122.90 -5.47 0.60 N 87 5 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 112.17 108.30 3.87 0.30 N 88 5 C6 A DT 8 ? ? C5 A DT 8 ? ? C7 A DT 8 ? ? 119.08 122.90 -3.82 0.60 N 89 5 C4 B DA 2 ? ? C5 B DA 2 ? ? C6 B DA 2 ? ? 113.52 117.00 -3.48 0.50 N 90 5 N1 B DA 2 ? ? C6 B DA 2 ? ? N6 B DA 2 ? ? 114.98 118.60 -3.62 0.60 N 91 5 C6 B DT 3 ? ? C5 B DT 3 ? ? C7 B DT 3 ? ? 117.29 122.90 -5.61 0.60 N 92 5 "O4'" B DT 4 ? ? "C1'" B DT 4 ? ? N1 B DT 4 ? ? 111.26 108.30 2.96 0.30 N 93 5 C4 B DA 6 ? ? C5 B DA 6 ? ? C6 B DA 6 ? ? 113.97 117.00 -3.03 0.50 N 94 5 "O4'" B DT 7 ? ? "C1'" B DT 7 ? ? N1 B DT 7 ? ? 110.36 108.30 2.06 0.30 N 95 5 C6 B DT 7 ? ? C5 B DT 7 ? ? C7 B DT 7 ? ? 117.77 122.90 -5.13 0.60 N 96 5 "O4'" B DT 8 ? ? "C1'" B DT 8 ? ? N1 B DT 8 ? ? 111.57 108.30 3.27 0.30 N 97 6 "O3'" A DC 1 ? ? P A DA 2 ? ? "O5'" A DA 2 ? ? 89.78 104.00 -14.22 1.90 Y 98 6 "O5'" A DA 2 ? ? "C5'" A DA 2 ? ? "C4'" A DA 2 ? ? 104.20 109.40 -5.20 0.80 N 99 6 "O4'" A DA 2 ? ? "C1'" A DA 2 ? ? N9 A DA 2 ? ? 116.26 108.30 7.96 0.30 N 100 6 C6 A DT 3 ? ? C5 A DT 3 ? ? C7 A DT 3 ? ? 117.39 122.90 -5.51 0.60 N 101 6 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 111.08 108.30 2.78 0.30 N 102 6 "O4'" A DA 6 ? ? "C1'" A DA 6 ? ? "C2'" A DA 6 ? ? 109.95 106.80 3.15 0.50 N 103 6 "O4'" A DA 6 ? ? "C1'" A DA 6 ? ? N9 A DA 6 ? ? 110.56 108.30 2.26 0.30 N 104 6 C4 A DA 6 ? ? C5 A DA 6 ? ? C6 A DA 6 ? ? 113.52 117.00 -3.48 0.50 N 105 6 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 117.10 122.90 -5.80 0.60 N 106 6 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 111.61 108.30 3.31 0.30 N 107 6 C6 A DT 8 ? ? C5 A DT 8 ? ? C7 A DT 8 ? ? 119.24 122.90 -3.66 0.60 N 108 6 "O4'" B DA 2 ? ? "C1'" B DA 2 ? ? "C2'" B DA 2 ? ? 110.23 106.80 3.43 0.50 N 109 6 "O4'" B DA 2 ? ? "C1'" B DA 2 ? ? N9 B DA 2 ? ? 110.47 108.30 2.17 0.30 N 110 6 C4 B DA 2 ? ? C5 B DA 2 ? ? C6 B DA 2 ? ? 113.59 117.00 -3.41 0.50 N 111 6 "O4'" B DT 3 ? ? "C1'" B DT 3 ? ? N1 B DT 3 ? ? 110.28 108.30 1.98 0.30 N 112 6 C6 B DT 3 ? ? C5 B DT 3 ? ? C7 B DT 3 ? ? 117.14 122.90 -5.76 0.60 N 113 6 "O4'" B DT 4 ? ? "C1'" B DT 4 ? ? N1 B DT 4 ? ? 111.30 108.30 3.00 0.30 N 114 6 C6 B DT 4 ? ? C5 B DT 4 ? ? C7 B DT 4 ? ? 119.24 122.90 -3.66 0.60 N 115 6 "O4'" B DA 6 ? ? "C1'" B DA 6 ? ? N9 B DA 6 ? ? 116.65 108.30 8.35 0.30 N 116 6 "O4'" B DT 7 ? ? "C1'" B DT 7 ? ? N1 B DT 7 ? ? 110.67 108.30 2.37 0.30 N 117 6 C6 B DT 7 ? ? C5 B DT 7 ? ? C7 B DT 7 ? ? 117.38 122.90 -5.52 0.60 N 118 6 "O4'" B DT 8 ? ? "C1'" B DT 8 ? ? N1 B DT 8 ? ? 112.46 108.30 4.16 0.30 N 119 6 C6 B DT 8 ? ? C5 B DT 8 ? ? C7 B DT 8 ? ? 118.97 122.90 -3.93 0.60 N 120 7 "O4'" A DA 2 ? ? "C1'" A DA 2 ? ? "C2'" A DA 2 ? ? 110.09 106.80 3.29 0.50 N 121 7 "O4'" A DA 2 ? ? "C1'" A DA 2 ? ? N9 A DA 2 ? ? 111.03 108.30 2.73 0.30 N 122 7 C4 A DA 2 ? ? C5 A DA 2 ? ? C6 A DA 2 ? ? 113.67 117.00 -3.33 0.50 N 123 7 N1 A DA 2 ? ? C6 A DA 2 ? ? N6 A DA 2 ? ? 114.96 118.60 -3.64 0.60 N 124 7 "O4'" A DT 3 ? ? "C1'" A DT 3 ? ? N1 A DT 3 ? ? 110.64 108.30 2.34 0.30 N 125 7 C6 A DT 3 ? ? C5 A DT 3 ? ? C7 A DT 3 ? ? 117.28 122.90 -5.62 0.60 N 126 7 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 112.02 108.30 3.72 0.30 N 127 7 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 119.20 122.90 -3.70 0.60 N 128 7 "O4'" A DA 6 ? ? "C1'" A DA 6 ? ? "C2'" A DA 6 ? ? 110.31 106.80 3.51 0.50 N 129 7 "O4'" A DA 6 ? ? "C1'" A DA 6 ? ? N9 A DA 6 ? ? 111.82 108.30 3.52 0.30 N 130 7 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.50 108.30 2.20 0.30 N 131 7 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 117.57 122.90 -5.33 0.60 N 132 7 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 112.08 108.30 3.78 0.30 N 133 7 "O4'" B DA 2 ? ? "C1'" B DA 2 ? ? "C2'" B DA 2 ? ? 110.57 106.80 3.77 0.50 N 134 7 "O4'" B DA 2 ? ? "C1'" B DA 2 ? ? N9 B DA 2 ? ? 112.77 108.30 4.47 0.30 N 135 7 C4 B DA 2 ? ? C5 B DA 2 ? ? C6 B DA 2 ? ? 113.87 117.00 -3.13 0.50 N 136 7 "O4'" B DT 3 ? ? "C1'" B DT 3 ? ? N1 B DT 3 ? ? 110.73 108.30 2.43 0.30 N 137 7 C6 B DT 3 ? ? C5 B DT 3 ? ? C7 B DT 3 ? ? 117.26 122.90 -5.64 0.60 N 138 7 "O4'" B DT 4 ? ? "C1'" B DT 4 ? ? N1 B DT 4 ? ? 111.75 108.30 3.45 0.30 N 139 7 "O4'" B DA 6 ? ? "C1'" B DA 6 ? ? "C2'" B DA 6 ? ? 109.97 106.80 3.17 0.50 N 140 7 "O4'" B DA 6 ? ? "C1'" B DA 6 ? ? N9 B DA 6 ? ? 110.40 108.30 2.10 0.30 N 141 7 C4 B DA 6 ? ? C5 B DA 6 ? ? C6 B DA 6 ? ? 113.59 117.00 -3.41 0.50 N 142 7 C6 B DT 7 ? ? C5 B DT 7 ? ? C7 B DT 7 ? ? 117.29 122.90 -5.61 0.60 N 143 7 "O4'" B DT 8 ? ? "C1'" B DT 8 ? ? N1 B DT 8 ? ? 112.16 108.30 3.86 0.30 N 144 7 C6 B DT 8 ? ? C5 B DT 8 ? ? C7 B DT 8 ? ? 119.20 122.90 -3.70 0.60 N 145 8 C4 A DA 2 ? ? C5 A DA 2 ? ? C6 A DA 2 ? ? 113.72 117.00 -3.28 0.50 N 146 8 C4 A DT 3 ? ? C5 A DT 3 ? ? C7 A DT 3 ? ? 122.67 119.00 3.67 0.60 N 147 8 C6 A DT 3 ? ? C5 A DT 3 ? ? C7 A DT 3 ? ? 117.10 122.90 -5.80 0.60 N 148 8 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 111.67 108.30 3.37 0.30 N 149 8 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 119.14 122.90 -3.76 0.60 N 150 8 "O3'" A DC 5 ? ? P A DA 6 ? ? "O5'" A DA 6 ? ? 90.67 104.00 -13.33 1.90 Y 151 8 "O5'" A DA 6 ? ? "C5'" A DA 6 ? ? "C4'" A DA 6 ? ? 104.56 109.40 -4.84 0.80 N 152 8 "O4'" A DA 6 ? ? "C1'" A DA 6 ? ? N9 A DA 6 ? ? 116.18 108.30 7.88 0.30 N 153 8 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 117.55 122.90 -5.35 0.60 N 154 8 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 111.27 108.30 2.97 0.30 N 155 8 "O4'" B DA 2 ? ? "C1'" B DA 2 ? ? "C2'" B DA 2 ? ? 110.16 106.80 3.36 0.50 N 156 8 "O4'" B DA 2 ? ? "C1'" B DA 2 ? ? N9 B DA 2 ? ? 112.36 108.30 4.06 0.30 N 157 8 C4 B DA 2 ? ? C5 B DA 2 ? ? C6 B DA 2 ? ? 113.97 117.00 -3.03 0.50 N 158 8 "O4'" B DT 3 ? ? "C1'" B DT 3 ? ? N1 B DT 3 ? ? 110.47 108.30 2.17 0.30 N 159 8 C6 B DT 3 ? ? C5 B DT 3 ? ? C7 B DT 3 ? ? 117.53 122.90 -5.37 0.60 N 160 8 "O4'" B DT 4 ? ? "C1'" B DT 4 ? ? N1 B DT 4 ? ? 111.36 108.30 3.06 0.30 N 161 8 C6 B DT 4 ? ? C5 B DT 4 ? ? C7 B DT 4 ? ? 119.30 122.90 -3.60 0.60 N 162 8 "O4'" B DA 6 ? ? "C1'" B DA 6 ? ? "C2'" B DA 6 ? ? 109.87 106.80 3.07 0.50 N 163 8 "O4'" B DA 6 ? ? "C1'" B DA 6 ? ? N9 B DA 6 ? ? 111.61 108.30 3.31 0.30 N 164 8 C4 B DA 6 ? ? C5 B DA 6 ? ? C6 B DA 6 ? ? 113.75 117.00 -3.25 0.50 N 165 8 C4 B DT 7 ? ? C5 B DT 7 ? ? C7 B DT 7 ? ? 122.71 119.00 3.71 0.60 N 166 8 C6 B DT 7 ? ? C5 B DT 7 ? ? C7 B DT 7 ? ? 117.14 122.90 -5.76 0.60 N 167 8 "O4'" B DT 8 ? ? "C1'" B DT 8 ? ? N1 B DT 8 ? ? 110.68 108.30 2.38 0.30 N 168 9 "O3'" A DC 1 ? ? P A DA 2 ? ? "O5'" A DA 2 ? ? 88.87 104.00 -15.13 1.90 Y 169 9 "O4'" A DA 2 ? ? "C1'" A DA 2 ? ? N9 A DA 2 ? ? 115.96 108.30 7.66 0.30 N 170 9 C6 A DT 3 ? ? C5 A DT 3 ? ? C7 A DT 3 ? ? 117.52 122.90 -5.38 0.60 N 171 9 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 112.19 108.30 3.89 0.30 N 172 9 "O4'" A DA 6 ? ? "C1'" A DA 6 ? ? "C2'" A DA 6 ? ? 110.08 106.80 3.28 0.50 N 173 9 "O4'" A DA 6 ? ? "C1'" A DA 6 ? ? N9 A DA 6 ? ? 110.32 108.30 2.02 0.30 N 174 9 C4 A DA 6 ? ? C5 A DA 6 ? ? C6 A DA 6 ? ? 113.81 117.00 -3.19 0.50 N 175 9 C4 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 122.88 119.00 3.88 0.60 N 176 9 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 116.88 122.90 -6.02 0.60 N 177 9 C6 A DT 8 ? ? C5 A DT 8 ? ? C7 A DT 8 ? ? 119.01 122.90 -3.89 0.60 N 178 9 "O4'" B DA 2 ? ? "C1'" B DA 2 ? ? "C2'" B DA 2 ? ? 110.45 106.80 3.65 0.50 N 179 9 "O4'" B DA 2 ? ? "C1'" B DA 2 ? ? N9 B DA 2 ? ? 111.14 108.30 2.84 0.30 N 180 9 C4 B DA 2 ? ? C5 B DA 2 ? ? C6 B DA 2 ? ? 113.96 117.00 -3.04 0.50 N 181 9 "O4'" B DT 3 ? ? "C1'" B DT 3 ? ? N1 B DT 3 ? ? 110.98 108.30 2.68 0.30 N 182 9 C6 B DT 3 ? ? C5 B DT 3 ? ? C7 B DT 3 ? ? 117.47 122.90 -5.43 0.60 N 183 9 "O4'" B DT 4 ? ? "C1'" B DT 4 ? ? N1 B DT 4 ? ? 111.29 108.30 2.99 0.30 N 184 9 "O4'" B DA 6 ? ? "C1'" B DA 6 ? ? "C2'" B DA 6 ? ? 110.41 106.80 3.61 0.50 N 185 9 "O4'" B DA 6 ? ? "C1'" B DA 6 ? ? N9 B DA 6 ? ? 110.61 108.30 2.31 0.30 N 186 9 "O4'" B DT 7 ? ? "C1'" B DT 7 ? ? N1 B DT 7 ? ? 110.24 108.30 1.94 0.30 N 187 9 C6 B DT 7 ? ? C5 B DT 7 ? ? C7 B DT 7 ? ? 117.47 122.90 -5.43 0.60 N 188 9 "O4'" B DT 8 ? ? "C1'" B DT 8 ? ? N1 B DT 8 ? ? 112.85 108.30 4.55 0.30 N 189 10 "O4'" A DA 2 ? ? "C1'" A DA 2 ? ? "C2'" A DA 2 ? ? 110.16 106.80 3.36 0.50 N 190 10 C4 A DA 2 ? ? C5 A DA 2 ? ? C6 A DA 2 ? ? 113.43 117.00 -3.57 0.50 N 191 10 C6 A DT 3 ? ? C5 A DT 3 ? ? C7 A DT 3 ? ? 117.47 122.90 -5.43 0.60 N 192 10 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 110.94 108.30 2.64 0.30 N 193 10 "O4'" A DA 6 ? ? "C1'" A DA 6 ? ? "C2'" A DA 6 ? ? 110.19 106.80 3.39 0.50 N 194 10 C4 A DA 6 ? ? C5 A DA 6 ? ? C6 A DA 6 ? ? 113.98 117.00 -3.02 0.50 N 195 10 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.20 108.30 1.90 0.30 N 196 10 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 117.50 122.90 -5.40 0.60 N 197 10 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 110.98 108.30 2.68 0.30 N 198 10 C4 B DA 2 ? ? C5 B DA 2 ? ? C6 B DA 2 ? ? 113.80 117.00 -3.20 0.50 N 199 10 C4 B DT 3 ? ? C5 B DT 3 ? ? C7 B DT 3 ? ? 122.94 119.00 3.94 0.60 N 200 10 C6 B DT 3 ? ? C5 B DT 3 ? ? C7 B DT 3 ? ? 116.87 122.90 -6.03 0.60 N 201 10 "O4'" B DT 4 ? ? "C1'" B DT 4 ? ? N1 B DT 4 ? ? 110.27 108.30 1.97 0.30 N 202 10 "O4'" B DC 5 ? ? "C4'" B DC 5 ? ? "C3'" B DC 5 ? ? 100.98 104.50 -3.52 0.40 N 203 10 "O4'" B DC 5 ? ? "C1'" B DC 5 ? ? N1 B DC 5 ? ? 110.87 108.30 2.57 0.30 N 204 10 C6 B DT 7 ? ? C5 B DT 7 ? ? C7 B DT 7 ? ? 117.09 122.90 -5.81 0.60 N 205 10 C6 B DT 8 ? ? C5 B DT 8 ? ? C7 B DT 8 ? ? 119.26 122.90 -3.64 0.60 N # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DA A 2 ? ? 0.084 'SIDE CHAIN' 2 1 DA B 2 ? ? 0.156 'SIDE CHAIN' 3 1 DA B 6 ? ? 0.089 'SIDE CHAIN' 4 2 DT A 3 ? ? 0.072 'SIDE CHAIN' 5 3 DA A 2 ? ? 0.069 'SIDE CHAIN' 6 3 DA B 2 ? ? 0.063 'SIDE CHAIN' 7 4 DT B 3 ? ? 0.075 'SIDE CHAIN' 8 6 DA A 2 ? ? 0.104 'SIDE CHAIN' 9 6 DT A 7 ? ? 0.068 'SIDE CHAIN' 10 6 DA B 6 ? ? 0.120 'SIDE CHAIN' 11 6 DT B 7 ? ? 0.069 'SIDE CHAIN' 12 7 DT A 8 ? ? 0.075 'SIDE CHAIN' 13 7 DT B 8 ? ? 0.076 'SIDE CHAIN' 14 8 DA A 6 ? ? 0.089 'SIDE CHAIN' 15 9 DA A 2 ? ? 0.084 'SIDE CHAIN' 16 9 DT B 3 ? ? 0.068 'SIDE CHAIN' 17 9 DT B 7 ? ? 0.075 'SIDE CHAIN' 18 10 DA A 2 ? ? 0.070 'SIDE CHAIN' 19 10 DT A 3 ? ? 0.066 'SIDE CHAIN' 20 10 DT A 4 ? ? 0.065 'SIDE CHAIN' 21 10 DT A 7 ? ? 0.070 'SIDE CHAIN' 22 10 DA B 2 ? ? 0.061 'SIDE CHAIN' # _pdbx_validate_chiral.id 1 _pdbx_validate_chiral.PDB_model_num 10 _pdbx_validate_chiral.auth_atom_id "C1'" _pdbx_validate_chiral.label_alt_id ? _pdbx_validate_chiral.auth_asym_id B _pdbx_validate_chiral.auth_comp_id DC _pdbx_validate_chiral.auth_seq_id 5 _pdbx_validate_chiral.PDB_ins_code ? _pdbx_validate_chiral.details 'WRONG HAND' _pdbx_validate_chiral.omega . # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DA 2 1_555 B DT 3 1_555 -0.120 -0.200 -0.117 2.457 -6.290 -0.780 1 A_DA2:DT3_B A 2 ? B 3 ? 20 1 1 A DT 3 1_555 B DA 2 1_555 0.093 -0.160 -0.173 5.189 -6.122 -3.536 2 A_DT3:DA2_B A 3 ? B 2 ? 20 1 1 A DA 6 1_555 B DT 7 1_555 0.151 -0.159 -0.241 -3.707 -5.710 5.332 3 A_DA6:DT7_B A 6 ? B 7 ? 20 1 1 A DT 7 1_555 B DA 6 1_555 -0.175 -0.137 -0.016 -0.853 -1.368 0.522 4 A_DT7:DA6_B A 7 ? B 6 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DA 2 1_555 B DT 3 1_555 A DT 3 1_555 B DA 2 1_555 -0.325 -1.693 3.152 -1.300 -2.064 26.383 -3.156 0.371 3.284 -4.510 2.840 26.494 1 AA_DA2DT3:DA2DT3_BB A 2 ? B 3 ? A 3 ? B 2 ? 1 A DA 6 1_555 B DT 7 1_555 A DT 7 1_555 B DA 6 1_555 -0.272 -1.279 3.142 -2.386 -2.155 23.673 -2.399 -0.108 3.255 -5.221 5.782 23.887 2 AA_DA6DT7:DA6DT7_BB A 6 ? B 7 ? A 7 ? B 6 ? #