data_1F4S # _entry.id 1F4S # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.355 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1F4S pdb_00001f4s 10.2210/pdb1f4s/pdb RCSB RCSB011242 ? ? WWPDB D_1000011242 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2ALC 'AlcR(1-60), free protein, NMR minimized averaged structure' unspecified PDB 3ALC 'AlcR(1-60), free protein, NMR, 17 structures' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1F4S _pdbx_database_status.recvd_initial_deposition_date 2000-06-09 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Cahuzac, B.' 1 'Cerdan, R.' 2 'Felenbok, B.' 3 'Guittet, E.' 4 # _citation.id primary _citation.title 'The solution structure of an AlcR-DNA complex sheds light onto the unique tight and monomeric DNA binding of a Zn(2)Cys(6) protein.' _citation.journal_abbrev Structure _citation.journal_volume 9 _citation.page_first 827 _citation.page_last 836 _citation.year 2001 _citation.journal_id_ASTM STRUE6 _citation.country UK _citation.journal_id_ISSN 0969-2126 _citation.journal_id_CSD 2005 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 11566132 _citation.pdbx_database_id_DOI '10.1016/S0969-2126(01)00640-2' # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Cahuzac, B.' 1 ? primary 'Cerdan, R.' 2 ? primary 'Felenbok, B.' 3 ? primary 'Guittet, E.' 4 ? # _cell.entry_id 1F4S _cell.length_a ? _cell.length_b ? _cell.length_c ? _cell.angle_alpha ? _cell.angle_beta ? _cell.angle_gamma ? _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(P*CP*GP*TP*GP*CP*GP*GP*AP*TP*C)-3') ; 3061.003 1 ? ? ? 'ALCR CONSENSUS HALF-TARGET' 2 polymer syn ;DNA (5'-D(P*GP*AP*TP*CP*CP*GP*CP*AP*CP*G)-3') ; 3029.993 1 ? ? ? 'ALCR CONSENSUS HALF-TARGET' 3 polymer man 'ETHANOL REGULON TRANSCRIPTIONAL FACTOR' 7580.351 1 ? 'N-TERMINAL DNA-BINDING DOMAIN, RESIDUES 1-60' ? ? 4 non-polymer syn 'ZINC ION' 65.409 2 ? ? ? ? 5 water nat water 18.015 1 ? ? ? ? # _entity_name_com.entity_id 3 _entity_name_com.name 'REGULATORY PROTEIN ALCR' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DC)(DG)(DT)(DG)(DC)(DG)(DG)(DA)(DT)(DC)' CGTGCGGATC A ? 2 polydeoxyribonucleotide no no '(DG)(DA)(DT)(DC)(DC)(DG)(DC)(DA)(DC)(DG)' GATCCGCACG B ? 3 'polypeptide(L)' no no GSMADTRRRQNHSCDPCRKGKRRCDAPENRNEANENGWVSCSNCKRWNKDCTFNWLSSQRSKNSS GSMADTRRRQNHSCDPCRKGKRRCDAPENRNEANENGWVSCSNCKRWNKDCTFNWLSSQRSKNSS P ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DG n 1 3 DT n 1 4 DG n 1 5 DC n 1 6 DG n 1 7 DG n 1 8 DA n 1 9 DT n 1 10 DC n 2 1 DG n 2 2 DA n 2 3 DT n 2 4 DC n 2 5 DC n 2 6 DG n 2 7 DC n 2 8 DA n 2 9 DC n 2 10 DG n 3 1 GLY n 3 2 SER n 3 3 MET n 3 4 ALA n 3 5 ASP n 3 6 THR n 3 7 ARG n 3 8 ARG n 3 9 ARG n 3 10 GLN n 3 11 ASN n 3 12 HIS n 3 13 SER n 3 14 CYS n 3 15 ASP n 3 16 PRO n 3 17 CYS n 3 18 ARG n 3 19 LYS n 3 20 GLY n 3 21 LYS n 3 22 ARG n 3 23 ARG n 3 24 CYS n 3 25 ASP n 3 26 ALA n 3 27 PRO n 3 28 GLU n 3 29 ASN n 3 30 ARG n 3 31 ASN n 3 32 GLU n 3 33 ALA n 3 34 ASN n 3 35 GLU n 3 36 ASN n 3 37 GLY n 3 38 TRP n 3 39 VAL n 3 40 SER n 3 41 CYS n 3 42 SER n 3 43 ASN n 3 44 CYS n 3 45 LYS n 3 46 ARG n 3 47 TRP n 3 48 ASN n 3 49 LYS n 3 50 ASP n 3 51 CYS n 3 52 THR n 3 53 PHE n 3 54 ASN n 3 55 TRP n 3 56 LEU n 3 57 SER n 3 58 SER n 3 59 GLN n 3 60 ARG n 3 61 SER n 3 62 LYS n 3 63 ASN n 3 64 SER n 3 65 SER n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Emericella _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Emericella nidulans' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 162425 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_code _struct_ref.db_name _struct_ref.entity_id _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 ALCR_EMENI UNP 3 P21228 3 MADTRRRQNHSCDPCRKGKRRCDAPENRNEANENGWVSCSNCKRWNKDCTFNWLSSQRSK ? 2 1F4S PDB 1 1F4S ? ? ? 3 1F4S PDB 2 1F4S ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1F4S P 5 ? 64 ? P21228 1 ? 60 ? 3 62 2 2 1F4S A 1 ? 10 ? 1F4S 1 ? 10 ? 1 10 3 3 1F4S B 1 ? 10 ? 1F4S 1 ? 10 ? 1 10 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1F4S GLY P 1 ? UNP P21228 ? ? insertion -1 1 1 1F4S SER P 2 ? UNP P21228 ? ? insertion 0 2 1 1F4S ASN P 63 ? UNP P21228 ? ? insertion 61 3 1 1F4S SER P 64 ? UNP P21228 ? ? insertion 62 4 1 1F4S SER P 65 ? UNP P21228 ? ? insertion 63 5 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type 1 1 1 '2D NOESY' 2 1 1 3D_15N-separated_NOESY 3 1 1 HNHA # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 293 _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 5.9 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1 mM AlcR U-15N, 1.1 mM double stranded DNA' _pdbx_nmr_sample_details.solvent_system '20 mM phosphate buffer; 90%H2O, 10%D2O; pH 5.9' # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.field_strength 1 ? Bruker DRX 800 2 ? Bruker DMX 600 # _pdbx_nmr_refine.entry_id 1F4S _pdbx_nmr_refine.method 'distance geometry, simulated annealing' _pdbx_nmr_refine.details ;1142 noe-derived constraints, 76 h-bond constraints, 33 phi angle restraints, 118 loose angle restraints on the DNA backbone ; _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 1F4S _pdbx_nmr_ensemble.conformers_calculated_total_number 20 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.conformer_selection_criteria 'The submitted conformer models are the 10 structures with the lowest energy.' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # loop_ _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.classification _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal XwinNMR 2.1 processing ? 1 Gifa 4 processing 'Delsuc, M.A.' 2 DIANA ? 'structure solution' Gntert 3 X-PLOR 3.1 refinement Brunger 4 # _exptl.entry_id 1F4S _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol ? _exptl_crystal.density_Matthews ? _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type ? # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _struct.entry_id 1F4S _struct.title 'STRUCTURE OF TRANSCRIPTIONAL FACTOR ALCR IN COMPLEX WITH A TARGET DNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1F4S _struct_keywords.pdbx_keywords TRANSCRIPTION/DNA _struct_keywords.text 'PROTEIN-DNA COMPLEX, ZINC BINUCLEAR CLUSTER PROTEIN, TRANSCRIPTION-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 CYS C 14 ? LYS C 21 ? CYS P 12 LYS P 19 1 ? 8 HELX_P HELX_P2 2 ASN C 29 ? ASN C 36 ? ASN P 27 ASN P 34 1 ? 8 HELX_P HELX_P3 3 CYS C 41 ? TRP C 47 ? CYS P 39 TRP P 45 1 ? 7 HELX_P HELX_P4 4 PHE C 53 ? ARG C 60 ? PHE P 51 ARG P 58 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? C CYS 14 SG ? ? ? 1_555 D ZN . ZN ? ? P CYS 12 P ZN 64 1_555 ? ? ? ? ? ? ? 2.348 ? ? metalc2 metalc ? ? C CYS 14 SG ? ? ? 1_555 E ZN . ZN ? ? P CYS 12 P ZN 65 1_555 ? ? ? ? ? ? ? 2.360 ? ? metalc3 metalc ? ? C CYS 17 SG ? ? ? 1_555 D ZN . ZN ? ? P CYS 15 P ZN 64 1_555 ? ? ? ? ? ? ? 2.345 ? ? metalc4 metalc ? ? C CYS 24 SG ? ? ? 1_555 D ZN . ZN ? ? P CYS 22 P ZN 64 1_555 ? ? ? ? ? ? ? 2.325 ? ? metalc5 metalc ? ? C CYS 41 SG ? ? ? 1_555 D ZN . ZN ? ? P CYS 39 P ZN 64 1_555 ? ? ? ? ? ? ? 2.373 ? ? metalc6 metalc ? ? C CYS 41 SG ? ? ? 1_555 E ZN . ZN ? ? P CYS 39 P ZN 65 1_555 ? ? ? ? ? ? ? 2.366 ? ? metalc7 metalc ? ? C CYS 44 SG ? ? ? 1_555 E ZN . ZN ? ? P CYS 42 P ZN 65 1_555 ? ? ? ? ? ? ? 2.351 ? ? metalc8 metalc ? ? C CYS 51 SG ? ? ? 1_555 E ZN . ZN ? ? P CYS 49 P ZN 65 1_555 ? ? ? ? ? ? ? 2.341 ? ? hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 B DG 10 N1 ? ? A DC 1 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DG 10 O6 ? ? A DC 1 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 B DG 10 N2 ? ? A DC 1 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DG 2 N1 ? ? ? 1_555 B DC 9 N3 ? ? A DG 2 B DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DG 2 N2 ? ? ? 1_555 B DC 9 O2 ? ? A DG 2 B DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B DC 9 N4 ? ? A DG 2 B DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DT 3 N3 ? ? ? 1_555 B DA 8 N1 ? ? A DT 3 B DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DT 3 O4 ? ? ? 1_555 B DA 8 N6 ? ? A DT 3 B DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 4 N1 ? ? ? 1_555 B DC 7 N3 ? ? A DG 4 B DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 4 N2 ? ? ? 1_555 B DC 7 O2 ? ? A DG 4 B DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B DC 7 N4 ? ? A DG 4 B DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DC 5 N3 ? ? ? 1_555 B DG 6 N1 ? ? A DC 5 B DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 5 N4 ? ? ? 1_555 B DG 6 O6 ? ? A DC 5 B DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 5 O2 ? ? ? 1_555 B DG 6 N2 ? ? A DC 5 B DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DG 6 N1 ? ? ? 1_555 B DC 5 N3 ? ? A DG 6 B DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DG 6 N2 ? ? ? 1_555 B DC 5 O2 ? ? A DG 6 B DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DG 6 O6 ? ? ? 1_555 B DC 5 N4 ? ? A DG 6 B DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DG 7 N1 ? ? ? 1_555 B DC 4 N3 ? ? A DG 7 B DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DG 7 N2 ? ? ? 1_555 B DC 4 O2 ? ? A DG 7 B DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DG 7 O6 ? ? ? 1_555 B DC 4 N4 ? ? A DG 7 B DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DA 8 N1 ? ? ? 1_555 B DT 3 N3 ? ? A DA 8 B DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DA 8 N6 ? ? ? 1_555 B DT 3 O4 ? ? A DA 8 B DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DT 9 N3 ? ? ? 1_555 B DA 2 N1 ? ? A DT 9 B DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DT 9 O4 ? ? ? 1_555 B DA 2 N6 ? ? A DT 9 B DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DC 10 N3 ? ? ? 1_555 B DG 1 N1 ? ? A DC 10 B DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DC 10 N4 ? ? ? 1_555 B DG 1 O6 ? ? A DC 10 B DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DC 10 O2 ? ? ? 1_555 B DG 1 N2 ? ? A DC 10 B DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software P ZN 64 ? 5 'BINDING SITE FOR RESIDUE ZN P 64' AC2 Software P ZN 65 ? 5 'BINDING SITE FOR RESIDUE ZN P 65' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 CYS C 14 ? CYS P 12 . ? 1_555 ? 2 AC1 5 CYS C 17 ? CYS P 15 . ? 1_555 ? 3 AC1 5 CYS C 24 ? CYS P 22 . ? 1_555 ? 4 AC1 5 CYS C 41 ? CYS P 39 . ? 1_555 ? 5 AC1 5 ZN E . ? ZN P 65 . ? 1_555 ? 6 AC2 5 CYS C 14 ? CYS P 12 . ? 1_555 ? 7 AC2 5 CYS C 41 ? CYS P 39 . ? 1_555 ? 8 AC2 5 CYS C 44 ? CYS P 42 . ? 1_555 ? 9 AC2 5 CYS C 51 ? CYS P 49 . ? 1_555 ? 10 AC2 5 ZN D . ? ZN P 64 . ? 1_555 ? # _database_PDB_matrix.entry_id 1F4S _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1F4S _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC C A . n A 1 2 DG 2 2 2 DG G A . n A 1 3 DT 3 3 3 DT T A . n A 1 4 DG 4 4 4 DG G A . n A 1 5 DC 5 5 5 DC C A . n A 1 6 DG 6 6 6 DG G A . n A 1 7 DG 7 7 7 DG G A . n A 1 8 DA 8 8 8 DA A A . n A 1 9 DT 9 9 9 DT T A . n A 1 10 DC 10 10 10 DC C A . n B 2 1 DG 1 1 1 DG G B . n B 2 2 DA 2 2 2 DA A B . n B 2 3 DT 3 3 3 DT T B . n B 2 4 DC 4 4 4 DC C B . n B 2 5 DC 5 5 5 DC C B . n B 2 6 DG 6 6 6 DG G B . n B 2 7 DC 7 7 7 DC C B . n B 2 8 DA 8 8 8 DA A B . n B 2 9 DC 9 9 9 DC C B . n B 2 10 DG 10 10 10 DG G B . n C 3 1 GLY 1 -1 -1 GLY GLY P . n C 3 2 SER 2 0 0 SER SER P . n C 3 3 MET 3 1 1 MET MET P . n C 3 4 ALA 4 2 2 ALA ALA P . n C 3 5 ASP 5 3 3 ASP ASP P . n C 3 6 THR 6 4 4 THR THR P . n C 3 7 ARG 7 5 5 ARG ARG P . n C 3 8 ARG 8 6 6 ARG ARG P . n C 3 9 ARG 9 7 7 ARG ARG P . n C 3 10 GLN 10 8 8 GLN GLN P . n C 3 11 ASN 11 9 9 ASN ASN P . n C 3 12 HIS 12 10 10 HIS HIS P . n C 3 13 SER 13 11 11 SER SER P . n C 3 14 CYS 14 12 12 CYS CYS P . n C 3 15 ASP 15 13 13 ASP ASP P . n C 3 16 PRO 16 14 14 PRO PRO P . n C 3 17 CYS 17 15 15 CYS CYS P . n C 3 18 ARG 18 16 16 ARG ARG P . n C 3 19 LYS 19 17 17 LYS LYS P . n C 3 20 GLY 20 18 18 GLY GLY P . n C 3 21 LYS 21 19 19 LYS LYS P . n C 3 22 ARG 22 20 20 ARG ARG P . n C 3 23 ARG 23 21 21 ARG ARG P . n C 3 24 CYS 24 22 22 CYS CYS P . n C 3 25 ASP 25 23 23 ASP ASP P . n C 3 26 ALA 26 24 24 ALA ALA P . n C 3 27 PRO 27 25 25 PRO PRO P . n C 3 28 GLU 28 26 26 GLU GLU P . n C 3 29 ASN 29 27 27 ASN ASN P . n C 3 30 ARG 30 28 28 ARG ARG P . n C 3 31 ASN 31 29 29 ASN ASN P . n C 3 32 GLU 32 30 30 GLU GLU P . n C 3 33 ALA 33 31 31 ALA ALA P . n C 3 34 ASN 34 32 32 ASN ASN P . n C 3 35 GLU 35 33 33 GLU GLU P . n C 3 36 ASN 36 34 34 ASN ASN P . n C 3 37 GLY 37 35 35 GLY GLY P . n C 3 38 TRP 38 36 36 TRP TRP P . n C 3 39 VAL 39 37 37 VAL VAL P . n C 3 40 SER 40 38 38 SER SER P . n C 3 41 CYS 41 39 39 CYS CYS P . n C 3 42 SER 42 40 40 SER SER P . n C 3 43 ASN 43 41 41 ASN ASN P . n C 3 44 CYS 44 42 42 CYS CYS P . n C 3 45 LYS 45 43 43 LYS LYS P . n C 3 46 ARG 46 44 44 ARG ARG P . n C 3 47 TRP 47 45 45 TRP TRP P . n C 3 48 ASN 48 46 46 ASN ASN P . n C 3 49 LYS 49 47 47 LYS LYS P . n C 3 50 ASP 50 48 48 ASP ASP P . n C 3 51 CYS 51 49 49 CYS CYS P . n C 3 52 THR 52 50 50 THR THR P . n C 3 53 PHE 53 51 51 PHE PHE P . n C 3 54 ASN 54 52 52 ASN ASN P . n C 3 55 TRP 55 53 53 TRP TRP P . n C 3 56 LEU 56 54 54 LEU LEU P . n C 3 57 SER 57 55 55 SER SER P . n C 3 58 SER 58 56 56 SER SER P . n C 3 59 GLN 59 57 57 GLN GLN P . n C 3 60 ARG 60 58 58 ARG ARG P . n C 3 61 SER 61 59 59 SER SER P . n C 3 62 LYS 62 60 60 LYS LYS P . n C 3 63 ASN 63 61 61 ASN ASN P . n C 3 64 SER 64 62 62 SER SER P . n C 3 65 SER 65 63 63 SER SER P . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 ZN 1 64 64 ZN ZN P . E 4 ZN 1 65 65 ZN ZN P . F 5 HOH 1 70 70 HOH HOH P . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? C CYS 14 ? P CYS 12 ? 1_555 ZN ? D ZN . ? P ZN 64 ? 1_555 SG ? C CYS 17 ? P CYS 15 ? 1_555 115.6 ? 2 SG ? C CYS 14 ? P CYS 12 ? 1_555 ZN ? D ZN . ? P ZN 64 ? 1_555 SG ? C CYS 24 ? P CYS 22 ? 1_555 110.9 ? 3 SG ? C CYS 17 ? P CYS 15 ? 1_555 ZN ? D ZN . ? P ZN 64 ? 1_555 SG ? C CYS 24 ? P CYS 22 ? 1_555 111.4 ? 4 SG ? C CYS 14 ? P CYS 12 ? 1_555 ZN ? D ZN . ? P ZN 64 ? 1_555 SG ? C CYS 41 ? P CYS 39 ? 1_555 95.5 ? 5 SG ? C CYS 17 ? P CYS 15 ? 1_555 ZN ? D ZN . ? P ZN 64 ? 1_555 SG ? C CYS 41 ? P CYS 39 ? 1_555 107.9 ? 6 SG ? C CYS 24 ? P CYS 22 ? 1_555 ZN ? D ZN . ? P ZN 64 ? 1_555 SG ? C CYS 41 ? P CYS 39 ? 1_555 114.8 ? 7 SG ? C CYS 14 ? P CYS 12 ? 1_555 ZN ? E ZN . ? P ZN 65 ? 1_555 SG ? C CYS 41 ? P CYS 39 ? 1_555 95.4 ? 8 SG ? C CYS 14 ? P CYS 12 ? 1_555 ZN ? E ZN . ? P ZN 65 ? 1_555 SG ? C CYS 44 ? P CYS 42 ? 1_555 115.5 ? 9 SG ? C CYS 41 ? P CYS 39 ? 1_555 ZN ? E ZN . ? P ZN 65 ? 1_555 SG ? C CYS 44 ? P CYS 42 ? 1_555 106.8 ? 10 SG ? C CYS 14 ? P CYS 12 ? 1_555 ZN ? E ZN . ? P ZN 65 ? 1_555 SG ? C CYS 51 ? P CYS 49 ? 1_555 107.2 ? 11 SG ? C CYS 41 ? P CYS 39 ? 1_555 ZN ? E ZN . ? P ZN 65 ? 1_555 SG ? C CYS 51 ? P CYS 49 ? 1_555 119.7 ? 12 SG ? C CYS 44 ? P CYS 42 ? 1_555 ZN ? E ZN . ? P ZN 65 ? 1_555 SG ? C CYS 51 ? P CYS 49 ? 1_555 111.7 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2001-09-28 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-02-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_struct_assembly 4 4 'Structure model' pdbx_struct_conn_angle 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_conn 7 4 'Structure model' struct_ref_seq_dif 8 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.value' 9 4 'Structure model' '_struct_conn.pdbx_dist_value' 10 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 11 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 12 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 13 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 14 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 15 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 16 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 17 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 18 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 19 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 20 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 21 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 22 4 'Structure model' '_struct_ref_seq_dif.details' 23 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 24 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 25 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 10 "H4'" B DC 5 ? ? "O4'" B DG 6 ? ? 1.40 2 10 "O3'" B DC 5 ? ? H8 B DG 6 ? ? 1.49 3 10 "H1'" B DC 5 ? ? N7 B DG 6 ? ? 1.60 4 10 OP1 A DG 2 ? ? O P ARG 44 ? ? 2.01 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 2 "C3'" A DT 9 ? ? "C2'" A DT 9 ? ? "C1'" A DT 9 ? ? 97.51 102.40 -4.89 0.80 N 2 2 "O4'" A DC 10 ? ? "C4'" A DC 10 ? ? "C3'" A DC 10 ? ? 101.50 104.50 -3.00 0.40 N 3 2 "C5'" A DC 10 ? ? "C4'" A DC 10 ? ? "C3'" A DC 10 ? ? 124.26 115.70 8.56 1.20 N 4 2 "C5'" A DC 10 ? ? "C4'" A DC 10 ? ? "O4'" A DC 10 ? ? 96.48 109.30 -12.82 1.90 N 5 2 "C3'" A DC 10 ? ? "C2'" A DC 10 ? ? "C1'" A DC 10 ? ? 96.57 102.40 -5.83 0.80 N 6 2 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 110.70 108.30 2.40 0.30 N 7 4 "O4'" A DC 10 ? ? "C4'" A DC 10 ? ? "C3'" A DC 10 ? ? 101.54 104.50 -2.96 0.40 N 8 4 "C5'" A DC 10 ? ? "C4'" A DC 10 ? ? "C3'" A DC 10 ? ? 124.18 115.70 8.48 1.20 N 9 4 "C5'" A DC 10 ? ? "C4'" A DC 10 ? ? "O4'" A DC 10 ? ? 96.64 109.30 -12.66 1.90 N 10 4 "C3'" A DC 10 ? ? "C2'" A DC 10 ? ? "C1'" A DC 10 ? ? 96.56 102.40 -5.84 0.80 N 11 4 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 110.56 108.30 2.26 0.30 N 12 6 "O4'" A DC 10 ? ? "C4'" A DC 10 ? ? "C3'" A DC 10 ? ? 101.56 104.50 -2.94 0.40 N 13 6 "C5'" A DC 10 ? ? "C4'" A DC 10 ? ? "C3'" A DC 10 ? ? 124.23 115.70 8.53 1.20 N 14 6 "C5'" A DC 10 ? ? "C4'" A DC 10 ? ? "O4'" A DC 10 ? ? 96.54 109.30 -12.76 1.90 N 15 6 "C3'" A DC 10 ? ? "C2'" A DC 10 ? ? "C1'" A DC 10 ? ? 96.60 102.40 -5.80 0.80 N 16 6 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 110.66 108.30 2.36 0.30 N 17 8 "O4'" A DC 10 ? ? "C4'" A DC 10 ? ? "C3'" A DC 10 ? ? 101.60 104.50 -2.90 0.40 N 18 8 "C5'" A DC 10 ? ? "C4'" A DC 10 ? ? "C3'" A DC 10 ? ? 124.14 115.70 8.44 1.20 N 19 8 "C5'" A DC 10 ? ? "C4'" A DC 10 ? ? "O4'" A DC 10 ? ? 96.94 109.30 -12.36 1.90 N 20 8 "C3'" A DC 10 ? ? "C2'" A DC 10 ? ? "C1'" A DC 10 ? ? 96.59 102.40 -5.81 0.80 N 21 8 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 110.55 108.30 2.25 0.30 N 22 9 "O4'" B DG 1 ? ? "C4'" B DG 1 ? ? "C3'" B DG 1 ? ? 100.09 104.50 -4.41 0.40 N 23 9 "C3'" B DG 1 ? ? "C2'" B DG 1 ? ? "C1'" B DG 1 ? ? 93.23 102.40 -9.17 0.80 N 24 9 P B DA 2 ? ? "O5'" B DA 2 ? ? "C5'" B DA 2 ? ? 111.11 120.90 -9.79 1.60 N 25 10 "C3'" A DG 2 ? ? "C2'" A DG 2 ? ? "C1'" A DG 2 ? ? 96.90 102.40 -5.50 0.80 N 26 10 "C3'" A DC 5 ? ? "C2'" A DC 5 ? ? "C1'" A DC 5 ? ? 93.84 102.40 -8.56 0.80 N 27 10 "C4'" B DC 5 ? ? "C3'" B DC 5 ? ? "C2'" B DC 5 ? ? 96.65 102.20 -5.55 0.70 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER P 0 ? ? -149.98 -50.27 2 1 ARG P 5 ? ? 172.35 -169.57 3 1 ARG P 6 ? ? 64.02 148.78 4 1 ARG P 7 ? ? 81.46 23.98 5 1 ASN P 9 ? ? -169.90 17.61 6 1 HIS P 10 ? ? 39.93 119.33 7 1 CYS P 22 ? ? -171.54 -172.50 8 1 ALA P 24 ? ? -34.99 97.03 9 1 PRO P 25 ? ? -97.84 -159.69 10 1 TRP P 36 ? ? -99.10 -123.14 11 1 VAL P 37 ? ? 156.89 -82.06 12 1 CYS P 39 ? ? -53.30 -173.63 13 1 ASN P 41 ? ? -76.25 -77.57 14 1 ASN P 46 ? ? 28.06 47.15 15 1 LYS P 47 ? ? -72.81 -124.09 16 1 CYS P 49 ? ? -37.59 91.21 17 1 ASN P 52 ? ? -97.68 -74.37 18 1 ASN P 61 ? ? 56.35 165.80 19 1 SER P 62 ? ? -82.57 -82.18 20 2 SER P 0 ? ? -150.05 44.97 21 2 MET P 1 ? ? -140.44 -45.23 22 2 ALA P 2 ? ? -93.02 -76.83 23 2 ARG P 5 ? ? -110.99 -164.48 24 2 ARG P 6 ? ? 79.58 118.60 25 2 ARG P 7 ? ? 66.56 99.53 26 2 GLN P 8 ? ? -136.22 -43.24 27 2 ASN P 9 ? ? -149.83 -8.06 28 2 HIS P 10 ? ? 79.49 149.13 29 2 LYS P 19 ? ? 63.61 67.93 30 2 CYS P 22 ? ? -169.86 -166.63 31 2 ALA P 24 ? ? -38.93 92.92 32 2 PRO P 25 ? ? -99.18 -155.72 33 2 TRP P 36 ? ? -119.33 -121.90 34 2 VAL P 37 ? ? 151.22 -95.92 35 2 CYS P 39 ? ? -78.21 -169.40 36 2 ASN P 41 ? ? -73.50 -85.08 37 2 ASN P 46 ? ? 27.96 37.04 38 2 LYS P 47 ? ? -71.87 -122.53 39 2 ASP P 48 ? ? -150.61 72.01 40 2 CYS P 49 ? ? -39.98 85.06 41 2 ASN P 52 ? ? -99.40 -81.19 42 2 SER P 55 ? ? -39.71 -29.81 43 2 ARG P 58 ? ? -82.89 -85.83 44 3 ARG P 6 ? ? 63.99 128.13 45 3 ARG P 7 ? ? 177.62 -10.10 46 3 GLN P 8 ? ? -126.16 -155.27 47 3 ASN P 9 ? ? -45.78 -12.81 48 3 HIS P 10 ? ? 80.07 155.09 49 3 LYS P 19 ? ? 66.36 60.30 50 3 VAL P 37 ? ? -146.36 -83.96 51 3 CYS P 39 ? ? -66.96 -175.25 52 3 ASN P 41 ? ? -68.18 -76.54 53 3 ASN P 46 ? ? 27.32 46.13 54 3 LYS P 47 ? ? -73.72 -125.80 55 3 ASP P 48 ? ? -150.67 69.94 56 3 ASN P 52 ? ? -97.90 -80.75 57 3 LYS P 60 ? ? -67.64 -114.13 58 3 ASN P 61 ? ? 80.27 68.19 59 4 SER P 0 ? ? -147.48 -65.31 60 4 MET P 1 ? ? -143.12 39.36 61 4 ASP P 3 ? ? -141.49 41.19 62 4 ARG P 5 ? ? 35.43 -172.74 63 4 ARG P 6 ? ? 77.68 120.01 64 4 ARG P 7 ? ? 57.57 100.10 65 4 GLN P 8 ? ? -145.70 -55.98 66 4 ASN P 9 ? ? -148.34 -1.08 67 4 HIS P 10 ? ? 78.70 143.71 68 4 LYS P 19 ? ? 66.78 66.02 69 4 CYS P 22 ? ? -174.32 -166.13 70 4 ALA P 24 ? ? -33.78 89.55 71 4 PRO P 25 ? ? -97.74 -156.13 72 4 TRP P 36 ? ? -107.32 -112.10 73 4 VAL P 37 ? ? 152.79 -103.12 74 4 CYS P 39 ? ? -50.78 -172.88 75 4 ASN P 41 ? ? -77.69 -79.83 76 4 ASN P 46 ? ? 27.86 42.41 77 4 LYS P 47 ? ? -72.08 -117.70 78 4 CYS P 49 ? ? -38.27 100.12 79 4 ASN P 52 ? ? -93.59 -83.52 80 4 ARG P 58 ? ? -81.17 -81.34 81 4 SER P 59 ? ? -156.62 51.07 82 4 LYS P 60 ? ? -52.92 -86.70 83 4 ASN P 61 ? ? -152.55 -150.89 84 5 MET P 1 ? ? -104.18 -118.64 85 5 ASP P 3 ? ? -150.28 59.99 86 5 ARG P 5 ? ? -151.32 -96.15 87 5 ARG P 6 ? ? 46.07 173.31 88 5 ARG P 7 ? ? 42.99 92.67 89 5 GLN P 8 ? ? -147.22 -31.87 90 5 ASN P 9 ? ? -177.53 14.35 91 5 HIS P 10 ? ? 58.80 136.11 92 5 LYS P 19 ? ? 67.23 61.88 93 5 TRP P 36 ? ? -95.99 -111.31 94 5 VAL P 37 ? ? 151.03 -107.84 95 5 CYS P 39 ? ? -51.01 -156.84 96 5 ASN P 41 ? ? -75.23 -76.18 97 5 ASN P 46 ? ? 28.45 47.34 98 5 LYS P 47 ? ? -73.90 -134.73 99 5 ASN P 52 ? ? -93.39 -73.44 100 5 ARG P 58 ? ? -81.31 -97.64 101 5 LYS P 60 ? ? -67.37 -176.35 102 5 ASN P 61 ? ? 157.83 165.43 103 6 SER P 0 ? ? -69.84 -91.97 104 6 MET P 1 ? ? -128.59 -128.84 105 6 ALA P 2 ? ? -93.00 -79.29 106 6 ARG P 6 ? ? 56.85 125.71 107 6 ARG P 7 ? ? -174.59 -25.31 108 6 GLN P 8 ? ? -157.14 -119.71 109 6 ASN P 9 ? ? -45.80 -10.69 110 6 HIS P 10 ? ? 62.16 145.44 111 6 LYS P 19 ? ? 39.24 74.62 112 6 ALA P 24 ? ? -34.41 94.83 113 6 TRP P 36 ? ? -109.91 -126.95 114 6 VAL P 37 ? ? 153.25 -63.18 115 6 SER P 38 ? ? -179.45 146.82 116 6 ASN P 41 ? ? -75.99 -79.41 117 6 ASN P 46 ? ? 29.16 47.12 118 6 LYS P 47 ? ? -72.60 -122.70 119 6 CYS P 49 ? ? -54.10 101.35 120 6 ASN P 52 ? ? -94.83 -84.26 121 6 SER P 59 ? ? -90.38 -63.87 122 6 LYS P 60 ? ? -68.65 -170.27 123 6 ASN P 61 ? ? 176.52 141.92 124 7 THR P 4 ? ? -89.16 39.21 125 7 ARG P 5 ? ? 165.45 -178.38 126 7 ARG P 6 ? ? 86.23 119.34 127 7 ARG P 7 ? ? 60.00 92.25 128 7 GLN P 8 ? ? -142.91 -50.78 129 7 ASN P 9 ? ? -153.15 -2.83 130 7 HIS P 10 ? ? 74.74 146.29 131 7 LYS P 19 ? ? 65.20 64.77 132 7 ALA P 24 ? ? -34.95 89.94 133 7 PRO P 25 ? ? -97.27 -155.60 134 7 TRP P 36 ? ? -119.98 -121.69 135 7 VAL P 37 ? ? 151.53 -95.68 136 7 ASN P 41 ? ? -75.58 -85.26 137 7 ASN P 46 ? ? 28.15 36.57 138 7 LYS P 47 ? ? -72.55 -113.53 139 7 ASP P 48 ? ? -161.80 75.77 140 7 CYS P 49 ? ? -36.87 84.66 141 7 ASN P 52 ? ? -98.59 -76.40 142 7 TRP P 53 ? ? -39.40 -30.64 143 7 ARG P 58 ? ? -79.10 -97.47 144 7 SER P 59 ? ? -155.55 22.54 145 7 ASN P 61 ? ? 50.62 101.54 146 8 ARG P 6 ? ? 77.87 155.17 147 8 ARG P 7 ? ? 21.45 107.58 148 8 GLN P 8 ? ? -153.90 -38.40 149 8 ASN P 9 ? ? -169.53 14.98 150 8 HIS P 10 ? ? 58.77 143.85 151 8 LYS P 19 ? ? 67.96 62.32 152 8 CYS P 22 ? ? -172.20 -170.42 153 8 ALA P 24 ? ? -33.61 89.89 154 8 TRP P 36 ? ? -99.58 -110.50 155 8 VAL P 37 ? ? 150.47 -106.80 156 8 CYS P 39 ? ? -54.30 -176.00 157 8 ASN P 41 ? ? -66.08 -79.19 158 8 CYS P 42 ? ? -38.24 -27.06 159 8 ASN P 46 ? ? 26.70 45.78 160 8 LYS P 47 ? ? -72.58 -120.24 161 8 CYS P 49 ? ? -38.59 102.74 162 8 ASN P 52 ? ? -95.69 -71.69 163 8 SER P 59 ? ? -74.53 -72.06 164 8 LYS P 60 ? ? -53.59 -170.93 165 8 ASN P 61 ? ? 167.96 125.92 166 9 MET P 1 ? ? -117.17 60.58 167 9 ARG P 5 ? ? 167.74 177.74 168 9 ARG P 6 ? ? 87.85 102.14 169 9 ARG P 7 ? ? 85.53 90.97 170 9 GLN P 8 ? ? -137.15 -53.11 171 9 ASN P 9 ? ? -147.14 -12.22 172 9 HIS P 10 ? ? 86.92 146.76 173 9 LYS P 19 ? ? 48.91 72.52 174 9 ALA P 24 ? ? -45.29 95.26 175 9 GLU P 26 ? ? 47.39 15.77 176 9 TRP P 36 ? ? -102.11 -125.80 177 9 VAL P 37 ? ? 154.84 -74.40 178 9 CYS P 39 ? ? -69.96 -154.02 179 9 ASN P 41 ? ? -70.72 -74.69 180 9 LYS P 43 ? ? -57.77 -70.28 181 9 ASN P 46 ? ? 27.81 41.30 182 9 LYS P 47 ? ? -73.20 -122.66 183 9 ASP P 48 ? ? -161.43 78.90 184 9 CYS P 49 ? ? -37.60 93.92 185 9 ASN P 52 ? ? -98.21 -74.76 186 9 ARG P 58 ? ? -76.93 -101.62 187 9 SER P 59 ? ? -155.19 35.96 188 9 SER P 62 ? ? -95.02 -72.24 189 10 SER P 0 ? ? -120.65 -68.70 190 10 MET P 1 ? ? -98.89 39.86 191 10 ARG P 6 ? ? 75.37 148.23 192 10 ASN P 9 ? ? -177.92 22.94 193 10 HIS P 10 ? ? 51.13 154.55 194 10 LYS P 19 ? ? 58.34 77.11 195 10 CYS P 22 ? ? -176.93 -165.85 196 10 ALA P 24 ? ? -36.72 94.48 197 10 TRP P 36 ? ? -99.81 -115.53 198 10 VAL P 37 ? ? 153.54 -100.77 199 10 CYS P 39 ? ? -54.28 -174.94 200 10 ASN P 41 ? ? -72.07 -74.97 201 10 ASN P 46 ? ? 28.04 52.08 202 10 LYS P 47 ? ? -72.77 -126.33 203 10 CYS P 49 ? ? -38.44 100.81 204 10 ASN P 52 ? ? -95.98 -80.57 205 10 ARG P 58 ? ? -64.42 -74.07 206 10 LYS P 60 ? ? -64.10 -177.99 207 10 ASN P 61 ? ? 173.98 -179.35 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 2 DC A 10 ? ? 0.085 'SIDE CHAIN' 2 4 DC A 10 ? ? 0.082 'SIDE CHAIN' 3 6 DC A 10 ? ? 0.084 'SIDE CHAIN' 4 6 DG B 6 ? ? 0.069 'SIDE CHAIN' 5 6 DC B 7 ? ? 0.067 'SIDE CHAIN' 6 8 DC A 10 ? ? 0.081 'SIDE CHAIN' 7 9 DG B 1 ? ? 0.069 'SIDE CHAIN' 8 10 DT A 3 ? ? 0.096 'SIDE CHAIN' 9 10 DG A 6 ? ? 0.068 'SIDE CHAIN' 10 10 DC B 5 ? ? 0.115 'SIDE CHAIN' # _ndb_struct_conf_na.entry_id 1F4S _ndb_struct_conf_na.feature 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 B DG 10 1_555 1.324 -0.417 0.328 -9.731 9.220 6.535 1 A_DC1:DG10_B A 1 ? B 10 ? 19 1 1 A DG 2 1_555 B DC 9 1_555 -0.290 0.060 0.066 6.976 -2.722 -3.619 2 A_DG2:DC9_B A 2 ? B 9 ? 19 1 1 A DT 3 1_555 B DA 8 1_555 -0.493 0.115 -0.450 13.291 17.577 -4.229 3 A_DT3:DA8_B A 3 ? B 8 ? 20 1 1 A DG 4 1_555 B DC 7 1_555 -0.370 0.020 -0.087 3.442 16.097 -0.963 4 A_DG4:DC7_B A 4 ? B 7 ? 19 1 1 A DC 5 1_555 B DG 6 1_555 0.810 -0.130 0.279 -8.386 -6.389 -2.889 5 A_DC5:DG6_B A 5 ? B 6 ? 19 1 1 A DG 6 1_555 B DC 5 1_555 -0.246 -0.114 -0.341 0.758 26.605 -5.711 6 A_DG6:DC5_B A 6 ? B 5 ? 19 1 1 A DG 7 1_555 B DC 4 1_555 -0.604 -0.125 0.107 18.054 -14.814 8.473 7 A_DG7:DC4_B A 7 ? B 4 ? 19 1 1 A DA 8 1_555 B DT 3 1_555 0.146 0.049 0.342 -1.640 19.786 4.499 8 A_DA8:DT3_B A 8 ? B 3 ? 20 1 1 A DT 9 1_555 B DA 2 1_555 -0.391 0.115 -0.022 0.934 14.202 0.955 9 A_DT9:DA2_B A 9 ? B 2 ? 20 1 1 A DC 10 1_555 B DG 1 1_555 0.495 -0.022 -0.335 12.272 13.626 -1.740 10 A_DC10:DG1_B A 10 ? B 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 B DG 10 1_555 A DG 2 1_555 B DC 9 1_555 0.273 0.173 3.255 8.367 -2.398 17.755 1.664 3.250 3.022 -7.233 -25.235 19.758 1 AA_DC1DG2:DC9DG10_BB A 1 ? B 10 ? A 2 ? B 9 ? 1 A DG 2 1_555 B DC 9 1_555 A DT 3 1_555 B DA 8 1_555 0.606 -0.678 3.097 8.544 17.837 27.027 -3.906 0.250 2.316 33.121 -15.865 33.382 2 AA_DG2DT3:DA8DC9_BB A 2 ? B 9 ? A 3 ? B 8 ? 1 A DT 3 1_555 B DA 8 1_555 A DG 4 1_555 B DC 7 1_555 0.732 1.285 4.147 -3.866 24.801 27.400 -2.728 -1.895 3.865 42.710 6.657 36.996 3 AA_DT3DG4:DC7DA8_BB A 3 ? B 8 ? A 4 ? B 7 ? 1 A DG 4 1_555 B DC 7 1_555 A DC 5 1_555 B DG 6 1_555 -0.818 0.308 4.844 1.398 4.086 30.765 -0.586 1.926 4.802 7.655 -2.618 31.060 4 AA_DG4DC5:DG6DC7_BB A 4 ? B 7 ? A 5 ? B 6 ? 1 A DC 5 1_555 B DG 6 1_555 A DG 6 1_555 B DC 5 1_555 -1.244 1.374 3.664 -0.132 10.601 23.811 -0.473 2.717 3.913 24.213 0.302 26.033 5 AA_DC5DG6:DC5DG6_BB A 5 ? B 6 ? A 6 ? B 5 ? 1 A DG 6 1_555 B DC 5 1_555 A DG 7 1_555 B DC 4 1_555 0.397 -0.447 3.076 0.867 12.807 17.207 -5.885 -0.750 2.225 36.858 -2.494 21.438 6 AA_DG6DG7:DC4DC5_BB A 6 ? B 5 ? A 7 ? B 4 ? 1 A DG 7 1_555 B DC 4 1_555 A DA 8 1_555 B DT 3 1_555 -1.191 0.621 4.749 -7.974 17.937 40.917 -1.651 0.457 4.757 24.062 10.697 45.200 7 AA_DG7DA8:DT3DC4_BB A 7 ? B 4 ? A 8 ? B 3 ? 1 A DA 8 1_555 B DT 3 1_555 A DT 9 1_555 B DA 2 1_555 -0.015 0.271 3.869 -0.447 23.107 12.000 -7.334 -0.121 2.038 62.911 1.218 26.003 8 AA_DA8DT9:DA2DT3_BB A 8 ? B 3 ? A 9 ? B 2 ? 1 A DT 9 1_555 B DA 2 1_555 A DC 10 1_555 B DG 1 1_555 -0.258 0.086 3.207 1.051 -3.248 28.251 0.903 0.760 3.165 -6.624 -2.143 28.452 9 AA_DT9DC10:DG1DA2_BB A 9 ? B 2 ? A 10 ? B 1 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'ZINC ION' ZN 5 water HOH #