data_1FMQ # _entry.id 1FMQ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.386 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1FMQ pdb_00001fmq 10.2210/pdb1fmq/pdb NDB DD0034 ? ? RCSB RCSB011719 ? ? WWPDB D_1000011719 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2000-09-11 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-04 5 'Structure model' 1 4 2024-02-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Refinement description' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 5 5 'Structure model' pdbx_struct_conn_angle 6 5 'Structure model' struct_conn 7 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 4 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 5 5 'Structure model' '_pdbx_struct_conn_angle.value' 6 5 'Structure model' '_struct_conn.pdbx_dist_value' 7 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 8 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 9 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 10 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1FMQ _pdbx_database_status.recvd_initial_deposition_date 2000-08-18 _pdbx_database_status.deposit_site NDB _pdbx_database_status.process_site NDB _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry N _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name NDB _pdbx_database_related.db_id DD0035 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Simpson, I.J.' 1 'Lee, M.' 2 'Kumar, A.' 3 'Boykin, D.W.' 4 'Neidle, S.' 5 # _citation.id primary _citation.title 'DNA minor groove interactions and the biological activity of 2,5-bis-[4-(N-alkylamidino)phenyl] furans' _citation.journal_abbrev Bioorg.Med.Chem.Lett. _citation.journal_volume 10 _citation.page_first 2593 _citation.page_last 2597 _citation.year 2000 _citation.journal_id_ASTM BMCLE8 _citation.country UK _citation.journal_id_ISSN 0960-894X _citation.journal_id_CSD 1127 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 11128631 _citation.pdbx_database_id_DOI '10.1016/S0960-894X(00)00511-4' # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Simpson, I.J.' 1 ? primary 'Lee, M.' 2 ? primary 'Kumar, A.' 3 ? primary 'Boykin, D.W.' 4 ? primary 'Neidle, S.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'" 3663.392 2 ? ? ? ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 3 non-polymer syn '2,5-BIS{[4-(N-CYCLOBUTYLDIAMINOMETHYL)PHENYL]}FURAN' 416.558 1 ? ? ? ? 4 water nat water 18.015 97 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DC)(DG)(DC)(DG)(DA)(DA)(DT)(DT)(DC)(DG)(DC)(DG)' _entity_poly.pdbx_seq_one_letter_code_can CGCGAATTCGCG _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 '2,5-BIS{[4-(N-CYCLOBUTYLDIAMINOMETHYL)PHENYL]}FURAN' D34 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DG n 1 3 DC n 1 4 DG n 1 5 DA n 1 6 DA n 1 7 DT n 1 8 DT n 1 9 DC n 1 10 DG n 1 11 DC n 1 12 DG n # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight D34 non-polymer . '2,5-BIS{[4-(N-CYCLOBUTYLDIAMINOMETHYL)PHENYL]}FURAN' ? 'C26 H32 N4 O' 416.558 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC C A . n A 1 2 DG 2 2 2 DG G A . n A 1 3 DC 3 3 3 DC C A . n A 1 4 DG 4 4 4 DG G A . n A 1 5 DA 5 5 5 DA A A . n A 1 6 DA 6 6 6 DA A A . n A 1 7 DT 7 7 7 DT T A . n A 1 8 DT 8 8 8 DT T A . n A 1 9 DC 9 9 9 DC C A . n A 1 10 DG 10 10 10 DG G A . n A 1 11 DC 11 11 11 DC C A . n A 1 12 DG 12 12 12 DG G A . n B 1 1 DC 1 13 13 DC C B . n B 1 2 DG 2 14 14 DG G B . n B 1 3 DC 3 15 15 DC C B . n B 1 4 DG 4 16 16 DG G B . n B 1 5 DA 5 17 17 DA A B . n B 1 6 DA 6 18 18 DA A B . n B 1 7 DT 7 19 19 DT T B . n B 1 8 DT 8 20 20 DT T B . n B 1 9 DC 9 21 21 DC C B . n B 1 10 DG 10 22 22 DG G B . n B 1 11 DC 11 23 23 DC C B . n B 1 12 DG 12 24 24 DG G B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG 1 26 26 MG MO6 A . D 3 D34 1 25 25 D34 D34 A . E 4 HOH 1 28 28 HOH HOH A . E 4 HOH 2 29 29 HOH HOH A . E 4 HOH 3 32 32 HOH HOH A . E 4 HOH 4 33 33 HOH HOH A . E 4 HOH 5 34 34 HOH HOH A . E 4 HOH 6 35 35 HOH HOH A . E 4 HOH 7 36 36 HOH HOH A . E 4 HOH 8 38 38 HOH HOH A . E 4 HOH 9 39 39 HOH HOH A . E 4 HOH 10 41 41 HOH HOH A . E 4 HOH 11 42 42 HOH HOH A . E 4 HOH 12 45 45 HOH HOH A . E 4 HOH 13 46 46 HOH HOH A . E 4 HOH 14 47 47 HOH HOH A . E 4 HOH 15 48 48 HOH HOH A . E 4 HOH 16 49 49 HOH HOH A . E 4 HOH 17 50 50 HOH HOH A . E 4 HOH 18 52 52 HOH HOH A . E 4 HOH 19 54 54 HOH HOH A . E 4 HOH 20 58 58 HOH HOH A . E 4 HOH 21 60 60 HOH HOH A . E 4 HOH 22 62 62 HOH HOH A . E 4 HOH 23 63 63 HOH HOH A . E 4 HOH 24 65 65 HOH HOH A . E 4 HOH 25 70 70 HOH HOH A . E 4 HOH 26 75 75 HOH HOH A . E 4 HOH 27 77 77 HOH HOH A . E 4 HOH 28 78 78 HOH HOH A . E 4 HOH 29 79 79 HOH HOH A . E 4 HOH 30 80 80 HOH HOH A . E 4 HOH 31 82 82 HOH HOH A . E 4 HOH 32 88 88 HOH HOH A . E 4 HOH 33 90 90 HOH HOH A . E 4 HOH 34 91 91 HOH HOH A . E 4 HOH 35 92 92 HOH HOH A . E 4 HOH 36 93 93 HOH HOH A . E 4 HOH 37 94 94 HOH HOH A . E 4 HOH 38 95 95 HOH HOH A . E 4 HOH 39 96 96 HOH HOH A . E 4 HOH 40 97 97 HOH HOH A . E 4 HOH 41 98 98 HOH HOH A . E 4 HOH 42 100 100 HOH HOH A . E 4 HOH 43 102 102 HOH HOH A . E 4 HOH 44 103 103 HOH HOH A . E 4 HOH 45 104 104 HOH HOH A . E 4 HOH 46 107 107 HOH HOH A . E 4 HOH 47 109 109 HOH HOH A . E 4 HOH 48 110 110 HOH HOH A . E 4 HOH 49 113 113 HOH HOH A . E 4 HOH 50 114 114 HOH HOH A . E 4 HOH 51 116 116 HOH HOH A . E 4 HOH 52 117 117 HOH HOH A . E 4 HOH 53 120 120 HOH HOH A . E 4 HOH 54 122 122 HOH HOH A . E 4 HOH 55 127 127 HOH HOH A . E 4 HOH 56 128 26 HOH MO6 A . E 4 HOH 57 129 26 HOH MO6 A . E 4 HOH 58 130 26 HOH MO6 A . E 4 HOH 59 131 26 HOH MO6 A . E 4 HOH 60 132 26 HOH MO6 A . E 4 HOH 61 133 26 HOH MO6 A . F 4 HOH 1 30 30 HOH HOH B . F 4 HOH 2 37 37 HOH HOH B . F 4 HOH 3 40 40 HOH HOH B . F 4 HOH 4 43 43 HOH HOH B . F 4 HOH 5 44 44 HOH HOH B . F 4 HOH 6 51 51 HOH HOH B . F 4 HOH 7 53 53 HOH HOH B . F 4 HOH 8 56 56 HOH HOH B . F 4 HOH 9 59 59 HOH HOH B . F 4 HOH 10 66 66 HOH HOH B . F 4 HOH 11 68 68 HOH HOH B . F 4 HOH 12 71 71 HOH HOH B . F 4 HOH 13 72 72 HOH HOH B . F 4 HOH 14 73 73 HOH HOH B . F 4 HOH 15 74 74 HOH HOH B . F 4 HOH 16 76 76 HOH HOH B . F 4 HOH 17 81 81 HOH HOH B . F 4 HOH 18 83 83 HOH HOH B . F 4 HOH 19 84 84 HOH HOH B . F 4 HOH 20 85 85 HOH HOH B . F 4 HOH 21 86 86 HOH HOH B . F 4 HOH 22 87 87 HOH HOH B . F 4 HOH 23 89 89 HOH HOH B . F 4 HOH 24 99 99 HOH HOH B . F 4 HOH 25 101 101 HOH HOH B . F 4 HOH 26 105 105 HOH HOH B . F 4 HOH 27 106 106 HOH HOH B . F 4 HOH 28 108 108 HOH HOH B . F 4 HOH 29 111 111 HOH HOH B . F 4 HOH 30 112 112 HOH HOH B . F 4 HOH 31 118 118 HOH HOH B . F 4 HOH 32 119 119 HOH HOH B . F 4 HOH 33 123 123 HOH HOH B . F 4 HOH 34 124 124 HOH HOH B . F 4 HOH 35 125 125 HOH HOH B . F 4 HOH 36 126 126 HOH HOH B . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SCALEPACK 'data scaling' . ? 1 X-PLOR 'model building' . ? 2 SHELX refinement . ? 3 X-PLOR phasing . ? 4 SHELXL-97 refinement . ? 5 # _cell.entry_id 1FMQ _cell.length_a 24.86 _cell.length_b 40.71 _cell.length_c 66.44 _cell.angle_alpha 90. _cell.angle_beta 90. _cell.angle_gamma 90. _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1FMQ _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting orthorhombic _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # _exptl.entry_id 1FMQ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 44.05 _exptl_crystal.density_Matthews 2.20 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 7 _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details ;MgCl2 2ul 125mM, Spermine 1ul 7.5 mM, Oligonucleotide 2ul 2mM, Drug 2ul 2mM, MPD 3ul 27% v/v, VAPOR DIFFUSION, SITTING DROP, temperature 291K ; _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.details 1 1 1 MgCl2 ? ? ? 1 2 1 Spermine ? ? ? 1 3 1 MPD ? ? ? 1 4 2 MPD ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 291 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IIC' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU200' _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1FMQ _reflns.observed_criterion_sigma_I 1.0 _reflns.observed_criterion_sigma_F 2.0 _reflns.d_resolution_low 10. _reflns.d_resolution_high 2.0 _reflns.number_obs 4992 _reflns.number_all ? _reflns.percent_possible_obs 95.4 _reflns.pdbx_Rmerge_I_obs 0.045 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 1FMQ _refine.ls_number_reflns_obs 4992 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2. _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_d_res_low 8. _refine.ls_d_res_high 2. _refine.ls_percent_reflns_obs 95.4 _refine.ls_R_factor_obs 0.188 _refine.ls_R_factor_all 0.193 _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free 0.209 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 250 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'Parkinson et al.' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details random _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 486 _refine_hist.pdbx_number_atoms_ligand 38 _refine_hist.number_atoms_solvent 91 _refine_hist.number_atoms_total 615 _refine_hist.d_res_high 2. _refine_hist.d_res_low 8. # _database_PDB_matrix.entry_id 1FMQ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1FMQ _struct.title 'Cyclo-butyl-bis-furamidine complexed with dCGCGAATTCGCG' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1FMQ _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'DNA-drug minor groove complex, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 4 ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 1FMQ _struct_ref.pdbx_db_accession 1FMQ _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1FMQ A 1 ? 12 ? 1FMQ 1 ? 12 ? 1 12 2 1 1FMQ B 1 ? 12 ? 1FMQ 13 ? 24 ? 13 24 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 26 A HOH 38 1_555 ? ? ? ? ? ? ? 1.903 ? ? metalc2 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 26 A HOH 128 1_555 ? ? ? ? ? ? ? 2.029 ? ? metalc3 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 26 A HOH 129 1_555 ? ? ? ? ? ? ? 2.033 ? ? metalc4 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 26 A HOH 130 1_555 ? ? ? ? ? ? ? 2.041 ? ? metalc5 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 26 A HOH 131 1_555 ? ? ? ? ? ? ? 2.032 ? ? metalc6 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 26 A HOH 132 1_555 ? ? ? ? ? ? ? 2.043 ? ? metalc7 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 26 A HOH 133 1_555 ? ? ? ? ? ? ? 2.029 ? ? hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 B DG 12 N1 ? ? A DC 1 B DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DG 12 O6 ? ? A DC 1 B DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 B DG 12 N2 ? ? A DC 1 B DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DG 2 N1 ? ? ? 1_555 B DC 11 N3 ? ? A DG 2 B DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DG 2 N2 ? ? ? 1_555 B DC 11 O2 ? ? A DG 2 B DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B DC 11 N4 ? ? A DG 2 B DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DC 3 N3 ? ? ? 1_555 B DG 10 N1 ? ? A DC 3 B DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 3 N4 ? ? ? 1_555 B DG 10 O6 ? ? A DC 3 B DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 3 O2 ? ? ? 1_555 B DG 10 N2 ? ? A DC 3 B DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 4 N1 ? ? ? 1_555 B DC 9 N3 ? ? A DG 4 B DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 4 N2 ? ? ? 1_555 B DC 9 O2 ? ? A DG 4 B DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B DC 9 N4 ? ? A DG 4 B DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DA 5 N1 ? ? ? 1_555 B DT 8 N3 ? ? A DA 5 B DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DA 5 N6 ? ? ? 1_555 B DT 8 O4 ? ? A DA 5 B DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DA 6 N1 ? ? ? 1_555 B DT 7 N3 ? ? A DA 6 B DT 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DA 6 N6 ? ? ? 1_555 B DT 7 O4 ? ? A DA 6 B DT 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DT 7 N3 ? ? ? 1_555 B DA 6 N1 ? ? A DT 7 B DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DT 7 O4 ? ? ? 1_555 B DA 6 N6 ? ? A DT 7 B DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DT 8 N3 ? ? ? 1_555 B DA 5 N1 ? ? A DT 8 B DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DT 8 O4 ? ? ? 1_555 B DA 5 N6 ? ? A DT 8 B DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DC 9 N3 ? ? ? 1_555 B DG 4 N1 ? ? A DC 9 B DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DC 9 N4 ? ? ? 1_555 B DG 4 O6 ? ? A DC 9 B DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DC 9 O2 ? ? ? 1_555 B DG 4 N2 ? ? A DC 9 B DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DG 10 N1 ? ? ? 1_555 B DC 3 N3 ? ? A DG 10 B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DG 10 N2 ? ? ? 1_555 B DC 3 O2 ? ? A DG 10 B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DG 10 O6 ? ? ? 1_555 B DC 3 N4 ? ? A DG 10 B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DC 11 N3 ? ? ? 1_555 B DG 2 N1 ? ? A DC 11 B DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DC 11 N4 ? ? ? 1_555 B DG 2 O6 ? ? A DC 11 B DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DC 11 O2 ? ? ? 1_555 B DG 2 N2 ? ? A DC 11 B DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DG 12 N1 ? ? ? 1_555 B DC 1 N3 ? ? A DG 12 B DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DG 12 N2 ? ? ? 1_555 B DC 1 O2 ? ? A DG 12 B DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DG 12 O6 ? ? ? 1_555 B DC 1 N4 ? ? A DG 12 B DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? E HOH . ? A HOH 38 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? E HOH . ? A HOH 128 ? 1_555 88.5 ? 2 O ? E HOH . ? A HOH 38 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? E HOH . ? A HOH 129 ? 1_555 168.1 ? 3 O ? E HOH . ? A HOH 128 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? E HOH . ? A HOH 129 ? 1_555 93.6 ? 4 O ? E HOH . ? A HOH 38 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? E HOH . ? A HOH 130 ? 1_555 79.1 ? 5 O ? E HOH . ? A HOH 128 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? E HOH . ? A HOH 130 ? 1_555 91.0 ? 6 O ? E HOH . ? A HOH 129 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? E HOH . ? A HOH 130 ? 1_555 89.1 ? 7 O ? E HOH . ? A HOH 38 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? E HOH . ? A HOH 131 ? 1_555 13.1 ? 8 O ? E HOH . ? A HOH 128 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? E HOH . ? A HOH 131 ? 1_555 88.2 ? 9 O ? E HOH . ? A HOH 129 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? E HOH . ? A HOH 131 ? 1_555 177.7 ? 10 O ? E HOH . ? A HOH 130 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? E HOH . ? A HOH 131 ? 1_555 92.2 ? 11 O ? E HOH . ? A HOH 38 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? E HOH . ? A HOH 132 ? 1_555 92.0 ? 12 O ? E HOH . ? A HOH 128 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? E HOH . ? A HOH 132 ? 1_555 175.1 ? 13 O ? E HOH . ? A HOH 129 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? E HOH . ? A HOH 132 ? 1_555 86.8 ? 14 O ? E HOH . ? A HOH 130 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? E HOH . ? A HOH 132 ? 1_555 94.0 ? 15 O ? E HOH . ? A HOH 131 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? E HOH . ? A HOH 132 ? 1_555 91.3 ? 16 O ? E HOH . ? A HOH 38 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? E HOH . ? A HOH 133 ? 1_555 101.9 ? 17 O ? E HOH . ? A HOH 128 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? E HOH . ? A HOH 133 ? 1_555 87.5 ? 18 O ? E HOH . ? A HOH 129 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? E HOH . ? A HOH 133 ? 1_555 89.9 ? 19 O ? E HOH . ? A HOH 130 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? E HOH . ? A HOH 133 ? 1_555 178.1 ? 20 O ? E HOH . ? A HOH 131 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? E HOH . ? A HOH 133 ? 1_555 88.8 ? 21 O ? E HOH . ? A HOH 132 ? 1_555 MG ? C MG . ? A MG 26 ? 1_555 O ? E HOH . ? A HOH 133 ? 1_555 87.5 ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 26 ? 7 'BINDING SITE FOR RESIDUE MG A 26' AC2 Software A D34 25 ? 12 'BINDING SITE FOR RESIDUE D34 A 25' 1 ? ? ? ? ? ? ? # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 HOH E . ? HOH A 38 . ? 1_555 ? 2 AC1 7 HOH E . ? HOH A 128 . ? 1_555 ? 3 AC1 7 HOH E . ? HOH A 129 . ? 1_555 ? 4 AC1 7 HOH E . ? HOH A 130 . ? 1_555 ? 5 AC1 7 HOH E . ? HOH A 131 . ? 1_555 ? 6 AC1 7 HOH E . ? HOH A 132 . ? 1_555 ? 7 AC1 7 HOH E . ? HOH A 133 . ? 1_555 ? 8 AC2 12 DA A 6 ? DA A 6 . ? 1_555 ? 9 AC2 12 DT A 7 ? DT A 7 . ? 1_555 ? 10 AC2 12 DT A 8 ? DT A 8 . ? 1_555 ? 11 AC2 12 DC A 9 ? DC A 9 . ? 1_555 ? 12 AC2 12 HOH E . ? HOH A 45 . ? 1_555 ? 13 AC2 12 HOH E . ? HOH A 54 . ? 1_555 ? 14 AC2 12 HOH E . ? HOH A 116 . ? 1_555 ? 15 AC2 12 DA B 5 ? DA B 17 . ? 1_555 ? 16 AC2 12 DA B 6 ? DA B 18 . ? 1_555 ? 17 AC2 12 DT B 7 ? DT B 19 . ? 1_555 ? 18 AC2 12 DT B 8 ? DT B 20 . ? 1_555 ? 19 AC2 12 DC B 9 ? DC B 21 . ? 1_555 ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 38 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 131 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 0.47 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 48 ? ? 1_555 O B HOH 124 ? ? 1_455 0.36 2 1 O A HOH 58 ? ? 1_555 O B HOH 101 ? ? 4_455 1.93 # loop_ _pdbx_validate_chiral.id _pdbx_validate_chiral.PDB_model_num _pdbx_validate_chiral.auth_atom_id _pdbx_validate_chiral.label_alt_id _pdbx_validate_chiral.auth_asym_id _pdbx_validate_chiral.auth_comp_id _pdbx_validate_chiral.auth_seq_id _pdbx_validate_chiral.PDB_ins_code _pdbx_validate_chiral.details _pdbx_validate_chiral.omega 1 1 C7 ? A D34 25 ? PLANAR . 2 1 "C7'" ? A D34 25 ? PLANAR . # _struct_site_keywords.site_id 1 _struct_site_keywords.text 'MINOR GROOVE BINDER' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal D34 C7 C N S 1 D34 N2 N N N 2 D34 N1 N N N 3 D34 C8 C N N 4 D34 C9 C N N 5 D34 C10 C N N 6 D34 C11 C N N 7 D34 C1 C Y N 8 D34 C2 C Y N 9 D34 C3 C Y N 10 D34 C4 C Y N 11 D34 C5 C Y N 12 D34 C6 C Y N 13 D34 CA C Y N 14 D34 O1 O Y N 15 D34 CB C Y N 16 D34 "CB'" C Y N 17 D34 "CA'" C Y N 18 D34 "C1'" C Y N 19 D34 "C2'" C Y N 20 D34 "C3'" C Y N 21 D34 "C4'" C Y N 22 D34 "C5'" C Y N 23 D34 "C6'" C Y N 24 D34 "C7'" C N R 25 D34 "N2'" N N N 26 D34 "N1'" N N N 27 D34 "C8'" C N N 28 D34 "C9'" C N N 29 D34 CAX C N N 30 D34 CBX C N N 31 D34 H77 H N N 32 D34 HN2 H N N 33 D34 HN1 H N N 34 D34 HN2A H N N 35 D34 H8 H N N 36 D34 H91 H N N 37 D34 H92 H N N 38 D34 H01 H N N 39 D34 H02 H N N 40 D34 H11 H N N 41 D34 H12 H N N 42 D34 H2 H N N 43 D34 H3 H N N 44 D34 H5 H N N 45 D34 H6 H N N 46 D34 HB H N N 47 D34 "HB'" H N N 48 D34 "H2'" H N N 49 D34 "H3'" H N N 50 D34 "H5'" H N N 51 D34 "H6'" H N N 52 D34 H7B H N N 53 D34 "HN2'" H N N 54 D34 "HN'1" H N N 55 D34 "HN'2" H N N 56 D34 "H8'" H N N 57 D34 "H9'1" H N N 58 D34 "H9'2" H N N 59 D34 "H0'1" H N N 60 D34 "H0'2" H N N 61 D34 "H1'1" H N N 62 D34 "H1'2" H N N 63 DA OP3 O N N 64 DA P P N N 65 DA OP1 O N N 66 DA OP2 O N N 67 DA "O5'" O N N 68 DA "C5'" C N N 69 DA "C4'" C N R 70 DA "O4'" O N N 71 DA "C3'" C N S 72 DA "O3'" O N N 73 DA "C2'" C N N 74 DA "C1'" C N R 75 DA N9 N Y N 76 DA C8 C Y N 77 DA N7 N Y N 78 DA C5 C Y N 79 DA C6 C Y N 80 DA N6 N N N 81 DA N1 N Y N 82 DA C2 C Y N 83 DA N3 N Y N 84 DA C4 C Y N 85 DA HOP3 H N N 86 DA HOP2 H N N 87 DA "H5'" H N N 88 DA "H5''" H N N 89 DA "H4'" H N N 90 DA "H3'" H N N 91 DA "HO3'" H N N 92 DA "H2'" H N N 93 DA "H2''" H N N 94 DA "H1'" H N N 95 DA H8 H N N 96 DA H61 H N N 97 DA H62 H N N 98 DA H2 H N N 99 DC OP3 O N N 100 DC P P N N 101 DC OP1 O N N 102 DC OP2 O N N 103 DC "O5'" O N N 104 DC "C5'" C N N 105 DC "C4'" C N R 106 DC "O4'" O N N 107 DC "C3'" C N S 108 DC "O3'" O N N 109 DC "C2'" C N N 110 DC "C1'" C N R 111 DC N1 N N N 112 DC C2 C N N 113 DC O2 O N N 114 DC N3 N N N 115 DC C4 C N N 116 DC N4 N N N 117 DC C5 C N N 118 DC C6 C N N 119 DC HOP3 H N N 120 DC HOP2 H N N 121 DC "H5'" H N N 122 DC "H5''" H N N 123 DC "H4'" H N N 124 DC "H3'" H N N 125 DC "HO3'" H N N 126 DC "H2'" H N N 127 DC "H2''" H N N 128 DC "H1'" H N N 129 DC H41 H N N 130 DC H42 H N N 131 DC H5 H N N 132 DC H6 H N N 133 DG OP3 O N N 134 DG P P N N 135 DG OP1 O N N 136 DG OP2 O N N 137 DG "O5'" O N N 138 DG "C5'" C N N 139 DG "C4'" C N R 140 DG "O4'" O N N 141 DG "C3'" C N S 142 DG "O3'" O N N 143 DG "C2'" C N N 144 DG "C1'" C N R 145 DG N9 N Y N 146 DG C8 C Y N 147 DG N7 N Y N 148 DG C5 C Y N 149 DG C6 C N N 150 DG O6 O N N 151 DG N1 N N N 152 DG C2 C N N 153 DG N2 N N N 154 DG N3 N N N 155 DG C4 C Y N 156 DG HOP3 H N N 157 DG HOP2 H N N 158 DG "H5'" H N N 159 DG "H5''" H N N 160 DG "H4'" H N N 161 DG "H3'" H N N 162 DG "HO3'" H N N 163 DG "H2'" H N N 164 DG "H2''" H N N 165 DG "H1'" H N N 166 DG H8 H N N 167 DG H1 H N N 168 DG H21 H N N 169 DG H22 H N N 170 DT OP3 O N N 171 DT P P N N 172 DT OP1 O N N 173 DT OP2 O N N 174 DT "O5'" O N N 175 DT "C5'" C N N 176 DT "C4'" C N R 177 DT "O4'" O N N 178 DT "C3'" C N S 179 DT "O3'" O N N 180 DT "C2'" C N N 181 DT "C1'" C N R 182 DT N1 N N N 183 DT C2 C N N 184 DT O2 O N N 185 DT N3 N N N 186 DT C4 C N N 187 DT O4 O N N 188 DT C5 C N N 189 DT C7 C N N 190 DT C6 C N N 191 DT HOP3 H N N 192 DT HOP2 H N N 193 DT "H5'" H N N 194 DT "H5''" H N N 195 DT "H4'" H N N 196 DT "H3'" H N N 197 DT "HO3'" H N N 198 DT "H2'" H N N 199 DT "H2''" H N N 200 DT "H1'" H N N 201 DT H3 H N N 202 DT H71 H N N 203 DT H72 H N N 204 DT H73 H N N 205 DT H6 H N N 206 HOH O O N N 207 HOH H1 H N N 208 HOH H2 H N N 209 MG MG MG N N 210 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal D34 C7 N2 sing N N 1 D34 C7 N1 sing N N 2 D34 C7 C4 sing N N 3 D34 C7 H77 sing N N 4 D34 N2 C8 sing N N 5 D34 N2 HN2 sing N N 6 D34 N1 HN1 sing N N 7 D34 N1 HN2A sing N N 8 D34 C8 C9 sing N N 9 D34 C8 C11 sing N N 10 D34 C8 H8 sing N N 11 D34 C9 C10 sing N N 12 D34 C9 H91 sing N N 13 D34 C9 H92 sing N N 14 D34 C10 C11 sing N N 15 D34 C10 H01 sing N N 16 D34 C10 H02 sing N N 17 D34 C11 H11 sing N N 18 D34 C11 H12 sing N N 19 D34 C1 C2 doub Y N 20 D34 C1 C6 sing Y N 21 D34 C1 CA sing Y N 22 D34 C2 C3 sing Y N 23 D34 C2 H2 sing N N 24 D34 C3 C4 doub Y N 25 D34 C3 H3 sing N N 26 D34 C4 C5 sing Y N 27 D34 C5 C6 doub Y N 28 D34 C5 H5 sing N N 29 D34 C6 H6 sing N N 30 D34 CA O1 sing Y N 31 D34 CA CB doub Y N 32 D34 O1 "CA'" sing Y N 33 D34 CB "CB'" sing Y N 34 D34 CB HB sing N N 35 D34 "CB'" "CA'" doub Y N 36 D34 "CB'" "HB'" sing N N 37 D34 "CA'" "C1'" sing Y N 38 D34 "C1'" "C2'" doub Y N 39 D34 "C1'" "C6'" sing Y N 40 D34 "C2'" "C3'" sing Y N 41 D34 "C2'" "H2'" sing N N 42 D34 "C3'" "C4'" doub Y N 43 D34 "C3'" "H3'" sing N N 44 D34 "C4'" "C5'" sing Y N 45 D34 "C4'" "C7'" sing N N 46 D34 "C5'" "C6'" doub Y N 47 D34 "C5'" "H5'" sing N N 48 D34 "C6'" "H6'" sing N N 49 D34 "C7'" "N2'" sing N N 50 D34 "C7'" "N1'" sing N N 51 D34 "C7'" H7B sing N N 52 D34 "N2'" "C8'" sing N N 53 D34 "N2'" "HN2'" sing N N 54 D34 "N1'" "HN'1" sing N N 55 D34 "N1'" "HN'2" sing N N 56 D34 "C8'" "C9'" sing N N 57 D34 "C8'" CBX sing N N 58 D34 "C8'" "H8'" sing N N 59 D34 "C9'" CAX sing N N 60 D34 "C9'" "H9'1" sing N N 61 D34 "C9'" "H9'2" sing N N 62 D34 CAX CBX sing N N 63 D34 CAX "H0'1" sing N N 64 D34 CAX "H0'2" sing N N 65 D34 CBX "H1'1" sing N N 66 D34 CBX "H1'2" sing N N 67 DA OP3 P sing N N 68 DA OP3 HOP3 sing N N 69 DA P OP1 doub N N 70 DA P OP2 sing N N 71 DA P "O5'" sing N N 72 DA OP2 HOP2 sing N N 73 DA "O5'" "C5'" sing N N 74 DA "C5'" "C4'" sing N N 75 DA "C5'" "H5'" sing N N 76 DA "C5'" "H5''" sing N N 77 DA "C4'" "O4'" sing N N 78 DA "C4'" "C3'" sing N N 79 DA "C4'" "H4'" sing N N 80 DA "O4'" "C1'" sing N N 81 DA "C3'" "O3'" sing N N 82 DA "C3'" "C2'" sing N N 83 DA "C3'" "H3'" sing N N 84 DA "O3'" "HO3'" sing N N 85 DA "C2'" "C1'" sing N N 86 DA "C2'" "H2'" sing N N 87 DA "C2'" "H2''" sing N N 88 DA "C1'" N9 sing N N 89 DA "C1'" "H1'" sing N N 90 DA N9 C8 sing Y N 91 DA N9 C4 sing Y N 92 DA C8 N7 doub Y N 93 DA C8 H8 sing N N 94 DA N7 C5 sing Y N 95 DA C5 C6 sing Y N 96 DA C5 C4 doub Y N 97 DA C6 N6 sing N N 98 DA C6 N1 doub Y N 99 DA N6 H61 sing N N 100 DA N6 H62 sing N N 101 DA N1 C2 sing Y N 102 DA C2 N3 doub Y N 103 DA C2 H2 sing N N 104 DA N3 C4 sing Y N 105 DC OP3 P sing N N 106 DC OP3 HOP3 sing N N 107 DC P OP1 doub N N 108 DC P OP2 sing N N 109 DC P "O5'" sing N N 110 DC OP2 HOP2 sing N N 111 DC "O5'" "C5'" sing N N 112 DC "C5'" "C4'" sing N N 113 DC "C5'" "H5'" sing N N 114 DC "C5'" "H5''" sing N N 115 DC "C4'" "O4'" sing N N 116 DC "C4'" "C3'" sing N N 117 DC "C4'" "H4'" sing N N 118 DC "O4'" "C1'" sing N N 119 DC "C3'" "O3'" sing N N 120 DC "C3'" "C2'" sing N N 121 DC "C3'" "H3'" sing N N 122 DC "O3'" "HO3'" sing N N 123 DC "C2'" "C1'" sing N N 124 DC "C2'" "H2'" sing N N 125 DC "C2'" "H2''" sing N N 126 DC "C1'" N1 sing N N 127 DC "C1'" "H1'" sing N N 128 DC N1 C2 sing N N 129 DC N1 C6 sing N N 130 DC C2 O2 doub N N 131 DC C2 N3 sing N N 132 DC N3 C4 doub N N 133 DC C4 N4 sing N N 134 DC C4 C5 sing N N 135 DC N4 H41 sing N N 136 DC N4 H42 sing N N 137 DC C5 C6 doub N N 138 DC C5 H5 sing N N 139 DC C6 H6 sing N N 140 DG OP3 P sing N N 141 DG OP3 HOP3 sing N N 142 DG P OP1 doub N N 143 DG P OP2 sing N N 144 DG P "O5'" sing N N 145 DG OP2 HOP2 sing N N 146 DG "O5'" "C5'" sing N N 147 DG "C5'" "C4'" sing N N 148 DG "C5'" "H5'" sing N N 149 DG "C5'" "H5''" sing N N 150 DG "C4'" "O4'" sing N N 151 DG "C4'" "C3'" sing N N 152 DG "C4'" "H4'" sing N N 153 DG "O4'" "C1'" sing N N 154 DG "C3'" "O3'" sing N N 155 DG "C3'" "C2'" sing N N 156 DG "C3'" "H3'" sing N N 157 DG "O3'" "HO3'" sing N N 158 DG "C2'" "C1'" sing N N 159 DG "C2'" "H2'" sing N N 160 DG "C2'" "H2''" sing N N 161 DG "C1'" N9 sing N N 162 DG "C1'" "H1'" sing N N 163 DG N9 C8 sing Y N 164 DG N9 C4 sing Y N 165 DG C8 N7 doub Y N 166 DG C8 H8 sing N N 167 DG N7 C5 sing Y N 168 DG C5 C6 sing N N 169 DG C5 C4 doub Y N 170 DG C6 O6 doub N N 171 DG C6 N1 sing N N 172 DG N1 C2 sing N N 173 DG N1 H1 sing N N 174 DG C2 N2 sing N N 175 DG C2 N3 doub N N 176 DG N2 H21 sing N N 177 DG N2 H22 sing N N 178 DG N3 C4 sing N N 179 DT OP3 P sing N N 180 DT OP3 HOP3 sing N N 181 DT P OP1 doub N N 182 DT P OP2 sing N N 183 DT P "O5'" sing N N 184 DT OP2 HOP2 sing N N 185 DT "O5'" "C5'" sing N N 186 DT "C5'" "C4'" sing N N 187 DT "C5'" "H5'" sing N N 188 DT "C5'" "H5''" sing N N 189 DT "C4'" "O4'" sing N N 190 DT "C4'" "C3'" sing N N 191 DT "C4'" "H4'" sing N N 192 DT "O4'" "C1'" sing N N 193 DT "C3'" "O3'" sing N N 194 DT "C3'" "C2'" sing N N 195 DT "C3'" "H3'" sing N N 196 DT "O3'" "HO3'" sing N N 197 DT "C2'" "C1'" sing N N 198 DT "C2'" "H2'" sing N N 199 DT "C2'" "H2''" sing N N 200 DT "C1'" N1 sing N N 201 DT "C1'" "H1'" sing N N 202 DT N1 C2 sing N N 203 DT N1 C6 sing N N 204 DT C2 O2 doub N N 205 DT C2 N3 sing N N 206 DT N3 C4 sing N N 207 DT N3 H3 sing N N 208 DT C4 O4 doub N N 209 DT C4 C5 sing N N 210 DT C5 C7 sing N N 211 DT C5 C6 doub N N 212 DT C7 H71 sing N N 213 DT C7 H72 sing N N 214 DT C7 H73 sing N N 215 DT C6 H6 sing N N 216 HOH O H1 sing N N 217 HOH O H2 sing N N 218 # _ndb_struct_conf_na.entry_id 1FMQ _ndb_struct_conf_na.feature 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 B DG 12 1_555 0.347 -0.127 0.225 -3.731 -9.761 -6.201 1 A_DC1:DG24_B A 1 ? B 24 ? 19 1 1 A DG 2 1_555 B DC 11 1_555 -0.168 -0.294 0.079 -3.435 -11.785 -2.644 2 A_DG2:DC23_B A 2 ? B 23 ? 19 1 1 A DC 3 1_555 B DG 10 1_555 -0.169 -0.205 0.084 -3.258 -6.221 -0.218 3 A_DC3:DG22_B A 3 ? B 22 ? 19 1 1 A DG 4 1_555 B DC 9 1_555 -0.298 -0.288 -0.273 4.602 -10.182 -4.813 4 A_DG4:DC21_B A 4 ? B 21 ? 19 1 1 A DA 5 1_555 B DT 8 1_555 0.308 0.158 0.130 2.170 -14.708 4.923 5 A_DA5:DT20_B A 5 ? B 20 ? 20 1 1 A DA 6 1_555 B DT 7 1_555 0.391 -0.041 0.298 7.544 -18.385 9.334 6 A_DA6:DT19_B A 6 ? B 19 ? 20 1 1 A DT 7 1_555 B DA 6 1_555 -0.229 0.018 0.093 -0.398 -18.781 7.112 7 A_DT7:DA18_B A 7 ? B 18 ? 20 1 1 A DT 8 1_555 B DA 5 1_555 -0.114 -0.187 -0.175 0.683 -19.725 2.603 8 A_DT8:DA17_B A 8 ? B 17 ? 20 1 1 A DC 9 1_555 B DG 4 1_555 0.049 -0.312 -0.193 -7.224 -9.073 -3.437 9 A_DC9:DG16_B A 9 ? B 16 ? 19 1 1 A DG 10 1_555 B DC 3 1_555 -0.116 -0.144 -0.049 3.459 -5.246 3.486 10 A_DG10:DC15_B A 10 ? B 15 ? 19 1 1 A DC 11 1_555 B DG 2 1_555 0.542 -0.298 0.204 2.147 -22.787 -3.398 11 A_DC11:DG14_B A 11 ? B 14 ? 19 1 1 A DG 12 1_555 B DC 1 1_555 0.135 -0.150 0.383 10.224 9.676 -6.907 12 A_DG12:DC13_B A 12 ? B 13 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 B DG 12 1_555 A DG 2 1_555 B DC 11 1_555 -0.113 0.224 3.391 1.208 8.464 33.579 -0.986 0.384 3.341 14.363 -2.049 34.620 1 AA_DC1DG2:DC23DG24_BB A 1 ? B 24 ? A 2 ? B 23 ? 1 A DG 2 1_555 B DC 11 1_555 A DC 3 1_555 B DG 10 1_555 0.519 0.257 3.399 2.035 -4.869 37.664 1.039 -0.527 3.364 -7.496 -3.133 38.018 2 AA_DG2DC3:DG22DC23_BB A 2 ? B 23 ? A 3 ? B 22 ? 1 A DC 3 1_555 B DG 10 1_555 A DG 4 1_555 B DC 9 1_555 -0.393 0.757 3.293 2.943 9.485 31.526 -0.336 1.209 3.326 16.939 -5.256 33.016 3 AA_DC3DG4:DC21DG22_BB A 3 ? B 22 ? A 4 ? B 21 ? 1 A DG 4 1_555 B DC 9 1_555 A DA 5 1_555 B DT 8 1_555 0.421 0.140 3.373 -2.505 3.297 37.016 -0.230 -1.002 3.338 5.174 3.930 37.239 4 AA_DG4DA5:DT20DC21_BB A 4 ? B 21 ? A 5 ? B 20 ? 1 A DA 5 1_555 B DT 8 1_555 A DA 6 1_555 B DT 7 1_555 0.235 -0.359 3.109 -2.064 3.063 36.210 -0.977 -0.648 3.052 4.912 3.310 36.391 5 AA_DA5DA6:DT19DT20_BB A 5 ? B 20 ? A 6 ? B 19 ? 1 A DA 6 1_555 B DT 7 1_555 A DT 7 1_555 B DA 6 1_555 -0.104 -0.823 3.518 2.484 -2.481 29.634 -1.039 0.763 3.553 -4.830 -4.836 29.836 6 AA_DA6DT7:DA18DT19_BB A 6 ? B 19 ? A 7 ? B 18 ? 1 A DT 7 1_555 B DA 6 1_555 A DT 8 1_555 B DA 5 1_555 -0.257 -0.261 3.219 2.374 6.150 35.724 -1.257 0.736 3.110 9.920 -3.829 36.308 7 AA_DT7DT8:DA17DA18_BB A 7 ? B 18 ? A 8 ? B 17 ? 1 A DT 8 1_555 B DA 5 1_555 A DC 9 1_555 B DG 4 1_555 -0.279 0.121 3.570 -0.209 -1.739 39.560 0.401 0.386 3.563 -2.568 0.309 39.597 8 AA_DT8DC9:DG16DA17_BB A 8 ? B 17 ? A 9 ? B 16 ? 1 A DC 9 1_555 B DG 4 1_555 A DG 10 1_555 B DC 3 1_555 0.541 1.301 3.288 -0.780 2.475 31.515 1.921 -1.139 3.363 4.547 1.433 31.619 9 AA_DC9DG10:DC15DG16_BB A 9 ? B 16 ? A 10 ? B 15 ? 1 A DG 10 1_555 B DC 3 1_555 A DC 11 1_555 B DG 2 1_555 -0.988 0.768 3.519 -3.341 -10.761 43.289 2.057 0.975 3.311 -14.300 4.440 44.663 10 AA_DG10DC11:DG14DC15_BB A 10 ? B 15 ? A 11 ? B 14 ? 1 A DC 11 1_555 B DG 2 1_555 A DG 12 1_555 B DC 1 1_555 0.679 0.392 3.367 -0.718 -3.601 35.635 1.166 -1.210 3.299 -5.865 1.170 35.818 11 AA_DC11DG12:DC13DG14_BB A 11 ? B 14 ? A 12 ? B 13 ? # _atom_sites.entry_id 1FMQ _atom_sites.fract_transf_matrix[1][1] 0.040225 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.024564 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015051 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P # loop_