data_1FQ4 # _entry.id 1FQ4 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.329 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1FQ4 RCSB RCSB011807 WWPDB D_1000011807 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2jxr . unspecified PDB 1dpj . unspecified PDB 1fq5 'Yeast Saccharopepsin complexed with PD-129,541.' unspecified PDB 1fq6 'Yeast Saccharopepsin complexed with PD-133,450.' unspecified PDB 1fq7 'Yeast Saccharopepsin complexed with CP-72,647.' unspecified PDB 1fq8 'Yeast Saccharopepsin complexed with CP-81,198.' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1FQ4 _pdbx_database_status.recvd_initial_deposition_date 2000-09-03 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Cronin, N.B.' 1 'Badasso, M.O.' 2 'Tickle, I.J.' 3 'Dreyer, T.' 4 'Hoover, D.J.' 5 'Rosati, R.L.' 6 'Humblet, C.C.' 7 'Lunney, E.A.' 8 'Cooper, J.B.' 9 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'X-ray structures of five renin inhibitors bound to saccharopepsin: exploration of active-site specificity.' J.Mol.Biol. 303 745 760 2000 JMOBAK UK 0022-2836 0070 ? 11061973 10.1006/jmbi.2000.4181 1 ;The Three-dimensional Structure at 2.4 A Resolution of Glycosylated Proteinase A from the Lysosome-like Vacuole of Saccharomyces cerevisiae ; J.Mol.Biol. 267 899 915 1997 JMOBAK UK 0022-2836 0070 ? ? 10.1006/jmbi.1996.0880 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Cronin, N.B.' 1 ? primary 'Badasso, M.O.' 2 ? primary 'J Tickle, I.' 3 ? primary 'Dreyer, T.' 4 ? primary 'Hoover, D.J.' 5 ? primary 'Rosati, R.L.' 6 ? primary 'Humblet, C.C.' 7 ? primary 'Lunney, E.A.' 8 ? primary 'Cooper, J.B.' 9 ? 1 'Aguilar, C.F.' 10 ? 1 'Cronin, N.B.' 11 ? 1 'Badasso, M.' 12 ? 1 'Dreyer, T.' 13 ? 1 'Newman, M.P.' 14 ? 1 'Cooper, J.B.' 15 ? 1 'Hoover, D.J.' 16 ? 1 'Wood, S.P.' 17 ? 1 'Johnson, M.S.' 18 ? 1 'Blundell, T.L.' 19 ? # _cell.entry_id 1FQ4 _cell.length_a 86.910 _cell.length_b 86.910 _cell.length_c 110.220 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1FQ4 _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat SACCHAROPEPSIN 35774.551 1 3.4.23.25 ? ? ? 2 branched man ;beta-D-glucopyranose-(1-2)-beta-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose ; 910.823 1 ? ? ? ? 3 non-polymer syn ;N-[(2R)-1-{[(2S,3R,5R)-1-cyclohexyl-3-hydroxy-5-{[2-(morpholin-4-yl)ethyl]carbamoyl}oct-7-yn-2-yl]amino}-3-(methylsulfa nyl)-1-oxopropan-2-yl]-1H-benzimidazole-2-carboxamide ; 640.836 1 ? ? ? ? 4 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 1 ? ? ? ? 5 water nat water 18.015 101 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'ASPARTATE PROTEASE, PROTEINASE A' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GGHDVPLTNYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACFLHSKYDHEASSSYKANGTEFAIQYGTGS LEGYISQDTLSIGDLTIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVVPPFYNAIQQDLLDEKRFAFYLGDTS KDTENGGEATFGGIDESKFKGDITWLPVRRKAYWEVKFEGIGLGDEYAELESHGAAIDTGTSLITLPSGLAEMINAEIGA KKGWTGQYTLDCNTRDNLPDLIFNFNGYNFTIGPYDYTLEVSGSCISAITPMDFPEPVGPLAIVGDAFLRKYYSIYDIGN NAVGLAKAI ; _entity_poly.pdbx_seq_one_letter_code_can ;GGHDVPLTNYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACFLHSKYDHEASSSYKANGTEFAIQYGTGS LEGYISQDTLSIGDLTIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVVPPFYNAIQQDLLDEKRFAFYLGDTS KDTENGGEATFGGIDESKFKGDITWLPVRRKAYWEVKFEGIGLGDEYAELESHGAAIDTGTSLITLPSGLAEMINAEIGA KKGWTGQYTLDCNTRDNLPDLIFNFNGYNFTIGPYDYTLEVSGSCISAITPMDFPEPVGPLAIVGDAFLRKYYSIYDIGN NAVGLAKAI ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 GLY n 1 3 HIS n 1 4 ASP n 1 5 VAL n 1 6 PRO n 1 7 LEU n 1 8 THR n 1 9 ASN n 1 10 TYR n 1 11 LEU n 1 12 ASN n 1 13 ALA n 1 14 GLN n 1 15 TYR n 1 16 TYR n 1 17 THR n 1 18 ASP n 1 19 ILE n 1 20 THR n 1 21 LEU n 1 22 GLY n 1 23 THR n 1 24 PRO n 1 25 PRO n 1 26 GLN n 1 27 ASN n 1 28 PHE n 1 29 LYS n 1 30 VAL n 1 31 ILE n 1 32 LEU n 1 33 ASP n 1 34 THR n 1 35 GLY n 1 36 SER n 1 37 SER n 1 38 ASN n 1 39 LEU n 1 40 TRP n 1 41 VAL n 1 42 PRO n 1 43 SER n 1 44 ASN n 1 45 GLU n 1 46 CYS n 1 47 GLY n 1 48 SER n 1 49 LEU n 1 50 ALA n 1 51 CYS n 1 52 PHE n 1 53 LEU n 1 54 HIS n 1 55 SER n 1 56 LYS n 1 57 TYR n 1 58 ASP n 1 59 HIS n 1 60 GLU n 1 61 ALA n 1 62 SER n 1 63 SER n 1 64 SER n 1 65 TYR n 1 66 LYS n 1 67 ALA n 1 68 ASN n 1 69 GLY n 1 70 THR n 1 71 GLU n 1 72 PHE n 1 73 ALA n 1 74 ILE n 1 75 GLN n 1 76 TYR n 1 77 GLY n 1 78 THR n 1 79 GLY n 1 80 SER n 1 81 LEU n 1 82 GLU n 1 83 GLY n 1 84 TYR n 1 85 ILE n 1 86 SER n 1 87 GLN n 1 88 ASP n 1 89 THR n 1 90 LEU n 1 91 SER n 1 92 ILE n 1 93 GLY n 1 94 ASP n 1 95 LEU n 1 96 THR n 1 97 ILE n 1 98 PRO n 1 99 LYS n 1 100 GLN n 1 101 ASP n 1 102 PHE n 1 103 ALA n 1 104 GLU n 1 105 ALA n 1 106 THR n 1 107 SER n 1 108 GLU n 1 109 PRO n 1 110 GLY n 1 111 LEU n 1 112 THR n 1 113 PHE n 1 114 ALA n 1 115 PHE n 1 116 GLY n 1 117 LYS n 1 118 PHE n 1 119 ASP n 1 120 GLY n 1 121 ILE n 1 122 LEU n 1 123 GLY n 1 124 LEU n 1 125 GLY n 1 126 TYR n 1 127 ASP n 1 128 THR n 1 129 ILE n 1 130 SER n 1 131 VAL n 1 132 ASP n 1 133 LYS n 1 134 VAL n 1 135 VAL n 1 136 PRO n 1 137 PRO n 1 138 PHE n 1 139 TYR n 1 140 ASN n 1 141 ALA n 1 142 ILE n 1 143 GLN n 1 144 GLN n 1 145 ASP n 1 146 LEU n 1 147 LEU n 1 148 ASP n 1 149 GLU n 1 150 LYS n 1 151 ARG n 1 152 PHE n 1 153 ALA n 1 154 PHE n 1 155 TYR n 1 156 LEU n 1 157 GLY n 1 158 ASP n 1 159 THR n 1 160 SER n 1 161 LYS n 1 162 ASP n 1 163 THR n 1 164 GLU n 1 165 ASN n 1 166 GLY n 1 167 GLY n 1 168 GLU n 1 169 ALA n 1 170 THR n 1 171 PHE n 1 172 GLY n 1 173 GLY n 1 174 ILE n 1 175 ASP n 1 176 GLU n 1 177 SER n 1 178 LYS n 1 179 PHE n 1 180 LYS n 1 181 GLY n 1 182 ASP n 1 183 ILE n 1 184 THR n 1 185 TRP n 1 186 LEU n 1 187 PRO n 1 188 VAL n 1 189 ARG n 1 190 ARG n 1 191 LYS n 1 192 ALA n 1 193 TYR n 1 194 TRP n 1 195 GLU n 1 196 VAL n 1 197 LYS n 1 198 PHE n 1 199 GLU n 1 200 GLY n 1 201 ILE n 1 202 GLY n 1 203 LEU n 1 204 GLY n 1 205 ASP n 1 206 GLU n 1 207 TYR n 1 208 ALA n 1 209 GLU n 1 210 LEU n 1 211 GLU n 1 212 SER n 1 213 HIS n 1 214 GLY n 1 215 ALA n 1 216 ALA n 1 217 ILE n 1 218 ASP n 1 219 THR n 1 220 GLY n 1 221 THR n 1 222 SER n 1 223 LEU n 1 224 ILE n 1 225 THR n 1 226 LEU n 1 227 PRO n 1 228 SER n 1 229 GLY n 1 230 LEU n 1 231 ALA n 1 232 GLU n 1 233 MET n 1 234 ILE n 1 235 ASN n 1 236 ALA n 1 237 GLU n 1 238 ILE n 1 239 GLY n 1 240 ALA n 1 241 LYS n 1 242 LYS n 1 243 GLY n 1 244 TRP n 1 245 THR n 1 246 GLY n 1 247 GLN n 1 248 TYR n 1 249 THR n 1 250 LEU n 1 251 ASP n 1 252 CYS n 1 253 ASN n 1 254 THR n 1 255 ARG n 1 256 ASP n 1 257 ASN n 1 258 LEU n 1 259 PRO n 1 260 ASP n 1 261 LEU n 1 262 ILE n 1 263 PHE n 1 264 ASN n 1 265 PHE n 1 266 ASN n 1 267 GLY n 1 268 TYR n 1 269 ASN n 1 270 PHE n 1 271 THR n 1 272 ILE n 1 273 GLY n 1 274 PRO n 1 275 TYR n 1 276 ASP n 1 277 TYR n 1 278 THR n 1 279 LEU n 1 280 GLU n 1 281 VAL n 1 282 SER n 1 283 GLY n 1 284 SER n 1 285 CYS n 1 286 ILE n 1 287 SER n 1 288 ALA n 1 289 ILE n 1 290 THR n 1 291 PRO n 1 292 MET n 1 293 ASP n 1 294 PHE n 1 295 PRO n 1 296 GLU n 1 297 PRO n 1 298 VAL n 1 299 GLY n 1 300 PRO n 1 301 LEU n 1 302 ALA n 1 303 ILE n 1 304 VAL n 1 305 GLY n 1 306 ASP n 1 307 ALA n 1 308 PHE n 1 309 LEU n 1 310 ARG n 1 311 LYS n 1 312 TYR n 1 313 TYR n 1 314 SER n 1 315 ILE n 1 316 TYR n 1 317 ASP n 1 318 ILE n 1 319 GLY n 1 320 ASN n 1 321 ASN n 1 322 ALA n 1 323 VAL n 1 324 GLY n 1 325 LEU n 1 326 ALA n 1 327 LYS n 1 328 ALA n 1 329 ILE n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name ;baker's yeast ; _entity_src_nat.pdbx_organism_scientific 'Saccharomyces cerevisiae' _entity_src_nat.pdbx_ncbi_taxonomy_id 4932 _entity_src_nat.genus Saccharomyces _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_code CARP_YEAST _struct_ref.db_name UNP _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P07267 _struct_ref.pdbx_align_begin 77 _struct_ref.pdbx_seq_one_letter_code ;GGHDVPLTNYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACFLHSKYDHEASSSYKANGTEFAIQYGTGS LEGYISQDTLSIGDLTIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVVPPFYNAIQQDLLDEKRFAFYLGDTS KDTENGGEATFGGIDESKFKGDITWLPVRRKAYWEVKFEGIGLGDEYAELESHGAAIDTGTSLITLPSGLAEMINAEIGA KKGWTGQYTLDCNTRDNLPDLIFNFNGYNFTIGPYDYTLEVSGSCISAITPMDFPEPVGPLAIVGDAFLRKYYSIYDLGN NAVGLAKAI ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1FQ4 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 329 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P07267 _struct_ref_seq.db_align_beg 77 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 405 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 0 _struct_ref_seq.pdbx_auth_seq_align_end 326 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 1FQ4 _struct_ref_seq_dif.mon_id ILE _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 318 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P07267 _struct_ref_seq_dif.db_mon_id LEU _struct_ref_seq_dif.pdbx_seq_db_seq_num 394 _struct_ref_seq_dif.details conflict _struct_ref_seq_dif.pdbx_auth_seq_num 315 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 2Y2 peptide-like . ;N-[(2R)-1-{[(2S,3R,5R)-1-cyclohexyl-3-hydroxy-5-{[2-(morpholin-4-yl)ethyl]carbamoyl}oct-7-yn-2-yl]amino}-3-(methylsulfa nyl)-1-oxopropan-2-yl]-1H-benzimidazole-2-carboxamide ; CP-108,420 'C33 H48 N6 O5 S' 640.836 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BGC 'D-saccharide, beta linking' . beta-D-glucopyranose ? 'C6 H12 O6' 180.156 BMA 'D-saccharide, beta linking' . beta-D-mannopyranose ? 'C6 H12 O6' 180.156 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ? 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1FQ4 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 63.36 _exptl_crystal.density_Matthews 3.36 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 5.5 _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details 'PEG 6000, sodium acetate, pH 5.5, VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 298 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.01 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SRS BEAMLINE PX9.5' _diffrn_source.pdbx_wavelength 1.01 _diffrn_source.pdbx_synchrotron_site SRS _diffrn_source.pdbx_synchrotron_beamline PX9.5 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1FQ4 _reflns.observed_criterion_sigma_I 3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 15.2 _reflns.d_resolution_high 2.7 _reflns.number_obs 12874 _reflns.number_all 16939 _reflns.percent_possible_obs 94.2 _reflns.pdbx_Rmerge_I_obs 0.08 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.0 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 1FQ4 _refine.ls_number_reflns_obs 12874 _refine.ls_number_reflns_all 12874 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_d_res_low 15.2 _refine.ls_d_res_high 2.7 _refine.ls_percent_reflns_obs 100 _refine.ls_R_factor_obs 0.17 _refine.ls_R_factor_all 0.17 _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 1030 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'Engh and Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_ML ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2528 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 120 _refine_hist.number_atoms_solvent 101 _refine_hist.number_atoms_total 2749 _refine_hist.d_res_high 2.7 _refine_hist.d_res_low 15.2 # _struct.entry_id 1FQ4 _struct.title 'CRYSTAL STRUCTURE OF A COMPLEX BETWEEN HYDROXYETHYLENE INHIBITOR CP-108,420 AND YEAST ASPARTIC PROTEINASE A' _struct.pdbx_descriptor 'SACCHAROPEPSIN (E.C.3.4.23.25)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1FQ4 _struct_keywords.pdbx_keywords 'HYDROLASE/HYDROLASE INHIBITOR' _struct_keywords.text 'Aspartic proteinase-inhibitor complex, extended beta-strand (inhibitor), HYDROLASE-HYDROLASE INHIBITOR complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 48 ? HIS A 54 ? SER A 47 HIS A 53 1 ? 7 HELX_P HELX_P2 2 ASP A 58 ? SER A 62 ? ASP A 57 SER A 61 5 ? 5 HELX_P HELX_P3 3 LEU A 111 ? GLY A 116 ? LEU A 110 GLY A 115 1 ? 6 HELX_P HELX_P4 4 TYR A 126 ? VAL A 134 ? TYR A 125 VAL A 133 5 ? 9 HELX_P HELX_P5 5 PRO A 136 ? GLN A 144 ? PRO A 135 GLN A 143 1 ? 9 HELX_P HELX_P6 6 PRO A 227 ? GLY A 239 ? PRO A 224 GLY A 236 1 ? 13 HELX_P HELX_P7 7 ASP A 251 ? LEU A 258 ? ASP A 248 LEU A 255 5 ? 8 HELX_P HELX_P8 8 GLY A 273 ? TYR A 277 ? GLY A 270 TYR A 274 1 ? 5 HELX_P HELX_P9 9 GLY A 305 ? ARG A 310 ? GLY A 302 ARG A 307 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 46 SG ? ? ? 1_555 A CYS 51 SG ? ? A CYS 45 A CYS 50 1_555 ? ? ? ? ? ? ? 2.005 ? ? disulf2 disulf ? ? A CYS 252 SG ? ? ? 1_555 A CYS 285 SG ? ? A CYS 249 A CYS 282 1_555 ? ? ? ? ? ? ? 1.997 ? ? covale1 covale one ? A ASN 68 ND2 ? ? ? 1_555 B NAG . C1 ? ? A ASN 67 B NAG 1 1_555 ? ? ? ? ? ? ? 1.476 ? N-Glycosylation covale2 covale one ? A ASN 269 ND2 ? ? ? 1_555 D NAG . C1 ? ? A ASN 266 A NAG 337 1_555 ? ? ? ? ? ? ? 1.451 ? N-Glycosylation covale3 covale both ? B NAG . O4 ? ? ? 1_555 B NAG . C1 ? ? B NAG 1 B NAG 2 1_555 ? ? ? ? ? ? ? 1.451 ? ? covale4 covale both ? B NAG . O4 ? ? ? 1_555 B BMA . C1 ? ? B NAG 2 B BMA 3 1_555 ? ? ? ? ? ? ? 1.458 ? ? covale5 covale both ? B BMA . O3 ? ? ? 1_555 B BMA . C1 ? ? B BMA 3 B BMA 4 1_555 ? ? ? ? ? ? ? 1.432 ? ? covale6 covale both ? B BMA . O2 ? ? ? 1_555 B BGC . C1 ? ? B BMA 4 B BGC 5 1_555 ? ? ? ? ? ? ? 1.503 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 THR 23 A . ? THR 22 A PRO 24 A ? PRO 23 A 1 -1.89 2 GLU 296 A . ? GLU 293 A PRO 297 A ? PRO 294 A 1 4.49 3 GLY 299 A . ? GLY 296 A PRO 300 A ? PRO 297 A 1 -6.31 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 8 ? C ? 4 ? D ? 4 ? E ? 6 ? F ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel B 4 5 ? anti-parallel B 5 6 ? parallel B 6 7 ? anti-parallel B 7 8 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? parallel E 4 5 ? anti-parallel E 5 6 ? parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel F 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 HIS A 3 ? PRO A 6 ? HIS A 2 PRO A 5 A 2 GLY A 167 ? PHE A 171 ? GLY A 163 PHE A 167 A 3 ARG A 151 ? LEU A 156 ? ARG A 150 LEU A 155 A 4 TYR A 312 ? ASP A 317 ? TYR A 309 ASP A 314 A 5 ALA A 322 ? ALA A 328 ? ALA A 319 ALA A 325 A 6 PHE A 179 ? PRO A 187 ? PHE A 175 PRO A 183 B 1 THR A 8 ? TYR A 10 ? THR A 7 TYR A 9 B 2 GLN A 14 ? LEU A 21 ? GLN A 13 LEU A 20 B 3 GLN A 26 ? ASP A 33 ? GLN A 25 ASP A 32 B 4 GLY A 120 ? GLY A 123 ? GLY A 119 GLY A 122 B 5 LEU A 39 ? PRO A 42 ? LEU A 38 PRO A 41 B 6 PHE A 102 ? SER A 107 ? PHE A 101 SER A 106 B 7 SER A 80 ? SER A 86 ? SER A 79 SER A 85 B 8 GLU A 71 ? GLN A 75 ? GLU A 70 GLN A 74 C 1 THR A 8 ? TYR A 10 ? THR A 7 TYR A 9 C 2 GLN A 14 ? LEU A 21 ? GLN A 13 LEU A 20 C 3 LEU A 90 ? ILE A 92 ? LEU A 89 ILE A 91 C 4 LEU A 95 ? ILE A 97 ? LEU A 94 ILE A 96 D 1 GLU A 206 ? GLU A 209 ? GLU A 202 GLU A 205 D 2 GLU A 195 ? LEU A 203 ? GLU A 191 LEU A 199 D 3 LEU A 261 ? PHE A 265 ? LEU A 258 PHE A 262 D 4 TYR A 268 ? ILE A 272 ? TYR A 265 ILE A 269 E 1 GLU A 206 ? GLU A 209 ? GLU A 202 GLU A 205 E 2 GLU A 195 ? LEU A 203 ? GLU A 191 LEU A 199 E 3 GLY A 214 ? ILE A 217 ? GLY A 210 ILE A 214 E 4 LEU A 301 ? VAL A 304 ? LEU A 298 VAL A 301 E 5 ILE A 224 ? LEU A 226 ? ILE A 221 LEU A 223 E 6 ILE A 289 ? PRO A 291 ? ILE A 286 PRO A 288 F 1 LYS A 241 ? LYS A 242 ? LYS A 238 LYS A 239 F 2 TYR A 248 ? LEU A 250 ? TYR A 245 LEU A 247 F 3 SER A 284 ? SER A 287 ? SER A 281 SER A 284 F 4 THR A 278 ? VAL A 281 ? THR A 275 VAL A 278 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 5 ? N VAL A 4 O ALA A 169 ? O ALA A 165 A 2 3 O THR A 170 ? O THR A 166 N ALA A 153 ? N ALA A 152 A 3 4 N PHE A 154 ? N PHE A 153 O SER A 314 ? O SER A 311 A 4 5 N ASP A 317 ? N ASP A 314 O ALA A 322 ? O ALA A 319 A 5 6 O VAL A 323 ? O VAL A 320 N LEU A 186 ? N LEU A 182 B 1 2 N TYR A 10 ? N TYR A 9 O GLN A 14 ? O GLN A 13 B 2 3 N LEU A 21 ? N LEU A 20 O GLN A 26 ? O GLN A 25 B 3 4 N ILE A 31 ? N ILE A 30 O LEU A 122 ? O LEU A 121 B 4 5 O ILE A 121 ? O ILE A 120 N TRP A 40 ? N TRP A 39 B 5 6 N VAL A 41 ? N VAL A 40 O ALA A 105 ? O ALA A 104 B 6 7 O THR A 106 ? O THR A 105 N GLU A 82 ? N GLU A 81 B 7 8 O GLY A 83 ? O GLY A 82 N PHE A 72 ? N PHE A 71 C 1 2 N TYR A 10 ? N TYR A 9 O GLN A 14 ? O GLN A 13 C 2 3 N THR A 20 ? N THR A 19 O SER A 91 ? O SER A 90 C 3 4 N LEU A 90 ? N LEU A 89 O ILE A 97 ? O ILE A 96 D 1 2 O ALA A 208 ? O ALA A 204 N ILE A 201 ? N ILE A 197 D 2 3 N GLY A 200 ? N GLY A 196 O ASN A 264 ? O ASN A 261 D 3 4 N LEU A 261 ? N LEU A 258 O ILE A 272 ? O ILE A 269 E 1 2 O ALA A 208 ? O ALA A 204 N ILE A 201 ? N ILE A 197 E 2 3 N VAL A 196 ? N VAL A 192 O ALA A 215 ? O ALA A 212 E 3 4 N GLY A 214 ? N GLY A 210 O ALA A 302 ? O ALA A 299 E 4 5 O ILE A 303 ? O ILE A 300 N THR A 225 ? N THR A 222 E 5 6 N ILE A 224 ? N ILE A 221 O THR A 290 ? O THR A 287 F 1 2 N LYS A 241 ? N LYS A 238 O THR A 249 ? O THR A 246 F 2 3 N TYR A 248 ? N TYR A 245 O SER A 287 ? O SER A 284 F 3 4 O ILE A 286 ? O ILE A 283 N LEU A 279 ? N LEU A 276 # _database_PDB_matrix.entry_id 1FQ4 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1FQ4 _atom_sites.fract_transf_matrix[1][1] 0.011506 _atom_sites.fract_transf_matrix[1][2] 0.006643 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013286 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009073 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _database_PDB_caveat.id _database_PDB_caveat.text 1 'GLU A 160 HAS WRONG CHIRALITY AT ATOM CA' 2 'TRP A 241 HAS WRONG CHIRALITY AT ATOM CA' 3 '2Y2 A 338 HAS WRONG CHIRALITY AT ATOM C23' 4 'NAG A 337 HAS WRONG CHIRALITY AT ATOM C1' # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 0 GLY GLY A . n A 1 2 GLY 2 1 1 GLY GLY A . n A 1 3 HIS 3 2 2 HIS HIS A . n A 1 4 ASP 4 3 3 ASP ASP A . n A 1 5 VAL 5 4 4 VAL VAL A . n A 1 6 PRO 6 5 5 PRO PRO A . n A 1 7 LEU 7 6 6 LEU LEU A . n A 1 8 THR 8 7 7 THR THR A . n A 1 9 ASN 9 8 8 ASN ASN A . n A 1 10 TYR 10 9 9 TYR TYR A . n A 1 11 LEU 11 10 10 LEU LEU A . n A 1 12 ASN 12 11 11 ASN ASN A . n A 1 13 ALA 13 12 12 ALA ALA A . n A 1 14 GLN 14 13 13 GLN GLN A . n A 1 15 TYR 15 14 14 TYR TYR A . n A 1 16 TYR 16 15 15 TYR TYR A . n A 1 17 THR 17 16 16 THR THR A . n A 1 18 ASP 18 17 17 ASP ASP A . n A 1 19 ILE 19 18 18 ILE ILE A . n A 1 20 THR 20 19 19 THR THR A . n A 1 21 LEU 21 20 20 LEU LEU A . n A 1 22 GLY 22 21 21 GLY GLY A . n A 1 23 THR 23 22 22 THR THR A . n A 1 24 PRO 24 23 23 PRO PRO A . n A 1 25 PRO 25 24 24 PRO PRO A . n A 1 26 GLN 26 25 25 GLN GLN A . n A 1 27 ASN 27 26 26 ASN ASN A . n A 1 28 PHE 28 27 27 PHE PHE A . n A 1 29 LYS 29 28 28 LYS LYS A . n A 1 30 VAL 30 29 29 VAL VAL A . n A 1 31 ILE 31 30 30 ILE ILE A . n A 1 32 LEU 32 31 31 LEU LEU A . n A 1 33 ASP 33 32 32 ASP ASP A . n A 1 34 THR 34 33 33 THR THR A . n A 1 35 GLY 35 34 34 GLY GLY A . n A 1 36 SER 36 35 35 SER SER A . n A 1 37 SER 37 36 36 SER SER A . n A 1 38 ASN 38 37 37 ASN ASN A . n A 1 39 LEU 39 38 38 LEU LEU A . n A 1 40 TRP 40 39 39 TRP TRP A . n A 1 41 VAL 41 40 40 VAL VAL A . n A 1 42 PRO 42 41 41 PRO PRO A . n A 1 43 SER 43 42 42 SER SER A . n A 1 44 ASN 44 43 43 ASN ASN A . n A 1 45 GLU 45 44 44 GLU GLU A . n A 1 46 CYS 46 45 45 CYS CYS A . n A 1 47 GLY 47 46 46 GLY GLY A . n A 1 48 SER 48 47 47 SER SER A . n A 1 49 LEU 49 48 48 LEU LEU A . n A 1 50 ALA 50 49 49 ALA ALA A . n A 1 51 CYS 51 50 50 CYS CYS A . n A 1 52 PHE 52 51 51 PHE PHE A . n A 1 53 LEU 53 52 52 LEU LEU A . n A 1 54 HIS 54 53 53 HIS HIS A . n A 1 55 SER 55 54 54 SER SER A . n A 1 56 LYS 56 55 55 LYS LYS A . n A 1 57 TYR 57 56 56 TYR TYR A . n A 1 58 ASP 58 57 57 ASP ASP A . n A 1 59 HIS 59 58 58 HIS HIS A . n A 1 60 GLU 60 59 59 GLU GLU A . n A 1 61 ALA 61 60 60 ALA ALA A . n A 1 62 SER 62 61 61 SER SER A . n A 1 63 SER 63 62 62 SER SER A . n A 1 64 SER 64 63 63 SER SER A . n A 1 65 TYR 65 64 64 TYR TYR A . n A 1 66 LYS 66 65 65 LYS LYS A . n A 1 67 ALA 67 66 66 ALA ALA A . n A 1 68 ASN 68 67 67 ASN ASN A . n A 1 69 GLY 69 68 68 GLY GLY A . n A 1 70 THR 70 69 69 THR THR A . n A 1 71 GLU 71 70 70 GLU GLU A . n A 1 72 PHE 72 71 71 PHE PHE A . n A 1 73 ALA 73 72 72 ALA ALA A . n A 1 74 ILE 74 73 73 ILE ILE A . n A 1 75 GLN 75 74 74 GLN GLN A . n A 1 76 TYR 76 75 75 TYR TYR A . n A 1 77 GLY 77 76 76 GLY GLY A . n A 1 78 THR 78 77 77 THR THR A . n A 1 79 GLY 79 78 78 GLY GLY A . n A 1 80 SER 80 79 79 SER SER A . n A 1 81 LEU 81 80 80 LEU LEU A . n A 1 82 GLU 82 81 81 GLU GLU A . n A 1 83 GLY 83 82 82 GLY GLY A . n A 1 84 TYR 84 83 83 TYR TYR A . n A 1 85 ILE 85 84 84 ILE ILE A . n A 1 86 SER 86 85 85 SER SER A . n A 1 87 GLN 87 86 86 GLN GLN A . n A 1 88 ASP 88 87 87 ASP ASP A . n A 1 89 THR 89 88 88 THR THR A . n A 1 90 LEU 90 89 89 LEU LEU A . n A 1 91 SER 91 90 90 SER SER A . n A 1 92 ILE 92 91 91 ILE ILE A . n A 1 93 GLY 93 92 92 GLY GLY A . n A 1 94 ASP 94 93 93 ASP ASP A . n A 1 95 LEU 95 94 94 LEU LEU A . n A 1 96 THR 96 95 95 THR THR A . n A 1 97 ILE 97 96 96 ILE ILE A . n A 1 98 PRO 98 97 97 PRO PRO A . n A 1 99 LYS 99 98 98 LYS LYS A . n A 1 100 GLN 100 99 99 GLN GLN A . n A 1 101 ASP 101 100 100 ASP ASP A . n A 1 102 PHE 102 101 101 PHE PHE A . n A 1 103 ALA 103 102 102 ALA ALA A . n A 1 104 GLU 104 103 103 GLU GLU A . n A 1 105 ALA 105 104 104 ALA ALA A . n A 1 106 THR 106 105 105 THR THR A . n A 1 107 SER 107 106 106 SER SER A . n A 1 108 GLU 108 107 107 GLU GLU A . n A 1 109 PRO 109 108 108 PRO PRO A . n A 1 110 GLY 110 109 109 GLY GLY A . n A 1 111 LEU 111 110 110 LEU LEU A . n A 1 112 THR 112 111 111 THR THR A . n A 1 113 PHE 113 112 112 PHE PHE A . n A 1 114 ALA 114 113 113 ALA ALA A . n A 1 115 PHE 115 114 114 PHE PHE A . n A 1 116 GLY 116 115 115 GLY GLY A . n A 1 117 LYS 117 116 116 LYS LYS A . n A 1 118 PHE 118 117 117 PHE PHE A . n A 1 119 ASP 119 118 118 ASP ASP A . n A 1 120 GLY 120 119 119 GLY GLY A . n A 1 121 ILE 121 120 120 ILE ILE A . n A 1 122 LEU 122 121 121 LEU LEU A . n A 1 123 GLY 123 122 122 GLY GLY A . n A 1 124 LEU 124 123 123 LEU LEU A . n A 1 125 GLY 125 124 124 GLY GLY A . n A 1 126 TYR 126 125 125 TYR TYR A . n A 1 127 ASP 127 126 126 ASP ASP A . n A 1 128 THR 128 127 127 THR THR A . n A 1 129 ILE 129 128 128 ILE ILE A . n A 1 130 SER 130 129 129 SER SER A . n A 1 131 VAL 131 130 130 VAL VAL A . n A 1 132 ASP 132 131 131 ASP ASP A . n A 1 133 LYS 133 132 132 LYS LYS A . n A 1 134 VAL 134 133 133 VAL VAL A . n A 1 135 VAL 135 134 134 VAL VAL A . n A 1 136 PRO 136 135 135 PRO PRO A . n A 1 137 PRO 137 136 136 PRO PRO A . n A 1 138 PHE 138 137 137 PHE PHE A . n A 1 139 TYR 139 138 138 TYR TYR A . n A 1 140 ASN 140 139 139 ASN ASN A . n A 1 141 ALA 141 140 140 ALA ALA A . n A 1 142 ILE 142 141 141 ILE ILE A . n A 1 143 GLN 143 142 142 GLN GLN A . n A 1 144 GLN 144 143 143 GLN GLN A . n A 1 145 ASP 145 144 144 ASP ASP A . n A 1 146 LEU 146 145 145 LEU LEU A . n A 1 147 LEU 147 146 146 LEU LEU A . n A 1 148 ASP 148 147 147 ASP ASP A . n A 1 149 GLU 149 148 148 GLU GLU A . n A 1 150 LYS 150 149 149 LYS LYS A . n A 1 151 ARG 151 150 150 ARG ARG A . n A 1 152 PHE 152 151 151 PHE PHE A . n A 1 153 ALA 153 152 152 ALA ALA A . n A 1 154 PHE 154 153 153 PHE PHE A . n A 1 155 TYR 155 154 154 TYR TYR A . n A 1 156 LEU 156 155 155 LEU LEU A . n A 1 157 GLY 157 156 156 GLY GLY A . n A 1 158 ASP 158 157 157 ASP ASP A . n A 1 159 THR 159 158 158 THR THR A . n A 1 160 SER 160 159 159 SER SER A . n A 1 161 LYS 161 159 159 LYS LYS A A n A 1 162 ASP 162 159 159 ASP ASP A B n A 1 163 THR 163 159 159 THR THR A C n A 1 164 GLU 164 160 160 GLU GLU A . n A 1 165 ASN 165 161 161 ASN ASN A . n A 1 166 GLY 166 162 162 GLY GLY A . n A 1 167 GLY 167 163 163 GLY GLY A . n A 1 168 GLU 168 164 164 GLU GLU A . n A 1 169 ALA 169 165 165 ALA ALA A . n A 1 170 THR 170 166 166 THR THR A . n A 1 171 PHE 171 167 167 PHE PHE A . n A 1 172 GLY 172 168 168 GLY GLY A . n A 1 173 GLY 173 169 169 GLY GLY A . n A 1 174 ILE 174 170 170 ILE ILE A . n A 1 175 ASP 175 171 171 ASP ASP A . n A 1 176 GLU 176 172 172 GLU GLU A . n A 1 177 SER 177 173 173 SER SER A . n A 1 178 LYS 178 174 174 LYS LYS A . n A 1 179 PHE 179 175 175 PHE PHE A . n A 1 180 LYS 180 176 176 LYS LYS A . n A 1 181 GLY 181 177 177 GLY GLY A . n A 1 182 ASP 182 178 178 ASP ASP A . n A 1 183 ILE 183 179 179 ILE ILE A . n A 1 184 THR 184 180 180 THR THR A . n A 1 185 TRP 185 181 181 TRP TRP A . n A 1 186 LEU 186 182 182 LEU LEU A . n A 1 187 PRO 187 183 183 PRO PRO A . n A 1 188 VAL 188 184 184 VAL VAL A . n A 1 189 ARG 189 185 185 ARG ARG A . n A 1 190 ARG 190 186 186 ARG ARG A . n A 1 191 LYS 191 187 187 LYS LYS A . n A 1 192 ALA 192 188 188 ALA ALA A . n A 1 193 TYR 193 189 189 TYR TYR A . n A 1 194 TRP 194 190 190 TRP TRP A . n A 1 195 GLU 195 191 191 GLU GLU A . n A 1 196 VAL 196 192 192 VAL VAL A . n A 1 197 LYS 197 193 193 LYS LYS A . n A 1 198 PHE 198 194 194 PHE PHE A . n A 1 199 GLU 199 195 195 GLU GLU A . n A 1 200 GLY 200 196 196 GLY GLY A . n A 1 201 ILE 201 197 197 ILE ILE A . n A 1 202 GLY 202 198 198 GLY GLY A . n A 1 203 LEU 203 199 199 LEU LEU A . n A 1 204 GLY 204 200 200 GLY GLY A . n A 1 205 ASP 205 201 201 ASP ASP A . n A 1 206 GLU 206 202 202 GLU GLU A . n A 1 207 TYR 207 203 203 TYR TYR A . n A 1 208 ALA 208 204 204 ALA ALA A . n A 1 209 GLU 209 205 205 GLU GLU A . n A 1 210 LEU 210 206 206 LEU LEU A . n A 1 211 GLU 211 207 207 GLU GLU A . n A 1 212 SER 212 208 208 SER SER A . n A 1 213 HIS 213 209 209 HIS HIS A . n A 1 214 GLY 214 210 210 GLY GLY A . n A 1 215 ALA 215 212 212 ALA ALA A . n A 1 216 ALA 216 213 213 ALA ALA A . n A 1 217 ILE 217 214 214 ILE ILE A . n A 1 218 ASP 218 215 215 ASP ASP A . n A 1 219 THR 219 216 216 THR THR A . n A 1 220 GLY 220 217 217 GLY GLY A . n A 1 221 THR 221 218 218 THR THR A . n A 1 222 SER 222 219 219 SER SER A . n A 1 223 LEU 223 220 220 LEU LEU A . n A 1 224 ILE 224 221 221 ILE ILE A . n A 1 225 THR 225 222 222 THR THR A . n A 1 226 LEU 226 223 223 LEU LEU A . n A 1 227 PRO 227 224 224 PRO PRO A . n A 1 228 SER 228 225 225 SER SER A . n A 1 229 GLY 229 226 226 GLY GLY A . n A 1 230 LEU 230 227 227 LEU LEU A . n A 1 231 ALA 231 228 228 ALA ALA A . n A 1 232 GLU 232 229 229 GLU GLU A . n A 1 233 MET 233 230 230 MET MET A . n A 1 234 ILE 234 231 231 ILE ILE A . n A 1 235 ASN 235 232 232 ASN ASN A . n A 1 236 ALA 236 233 233 ALA ALA A . n A 1 237 GLU 237 234 234 GLU GLU A . n A 1 238 ILE 238 235 235 ILE ILE A . n A 1 239 GLY 239 236 236 GLY GLY A . n A 1 240 ALA 240 237 237 ALA ALA A . n A 1 241 LYS 241 238 238 LYS LYS A . n A 1 242 LYS 242 239 239 LYS LYS A . n A 1 243 GLY 243 240 240 GLY GLY A . n A 1 244 TRP 244 241 241 TRP TRP A . n A 1 245 THR 245 242 242 THR THR A . n A 1 246 GLY 246 243 243 GLY GLY A . n A 1 247 GLN 247 244 244 GLN GLN A . n A 1 248 TYR 248 245 245 TYR TYR A . n A 1 249 THR 249 246 246 THR THR A . n A 1 250 LEU 250 247 247 LEU LEU A . n A 1 251 ASP 251 248 248 ASP ASP A . n A 1 252 CYS 252 249 249 CYS CYS A . n A 1 253 ASN 253 250 250 ASN ASN A . n A 1 254 THR 254 251 251 THR THR A . n A 1 255 ARG 255 252 252 ARG ARG A . n A 1 256 ASP 256 253 253 ASP ASP A . n A 1 257 ASN 257 254 254 ASN ASN A . n A 1 258 LEU 258 255 255 LEU LEU A . n A 1 259 PRO 259 256 256 PRO PRO A . n A 1 260 ASP 260 257 257 ASP ASP A . n A 1 261 LEU 261 258 258 LEU LEU A . n A 1 262 ILE 262 259 259 ILE ILE A . n A 1 263 PHE 263 260 260 PHE PHE A . n A 1 264 ASN 264 261 261 ASN ASN A . n A 1 265 PHE 265 262 262 PHE PHE A . n A 1 266 ASN 266 263 263 ASN ASN A . n A 1 267 GLY 267 264 264 GLY GLY A . n A 1 268 TYR 268 265 265 TYR TYR A . n A 1 269 ASN 269 266 266 ASN ASN A . n A 1 270 PHE 270 267 267 PHE PHE A . n A 1 271 THR 271 268 268 THR THR A . n A 1 272 ILE 272 269 269 ILE ILE A . n A 1 273 GLY 273 270 270 GLY GLY A . n A 1 274 PRO 274 271 271 PRO PRO A . n A 1 275 TYR 275 272 272 TYR TYR A . n A 1 276 ASP 276 273 273 ASP ASP A . n A 1 277 TYR 277 274 274 TYR TYR A . n A 1 278 THR 278 275 275 THR THR A . n A 1 279 LEU 279 276 276 LEU LEU A . n A 1 280 GLU 280 277 277 GLU GLU A . n A 1 281 VAL 281 278 278 VAL VAL A . n A 1 282 SER 282 279 279 SER SER A . n A 1 283 GLY 283 280 280 GLY GLY A . n A 1 284 SER 284 281 281 SER SER A . n A 1 285 CYS 285 282 282 CYS CYS A . n A 1 286 ILE 286 283 283 ILE ILE A . n A 1 287 SER 287 284 284 SER SER A . n A 1 288 ALA 288 285 285 ALA ALA A . n A 1 289 ILE 289 286 286 ILE ILE A . n A 1 290 THR 290 287 287 THR THR A . n A 1 291 PRO 291 288 288 PRO PRO A . n A 1 292 MET 292 289 289 MET MET A . n A 1 293 ASP 293 290 290 ASP ASP A . n A 1 294 PHE 294 291 291 PHE PHE A . n A 1 295 PRO 295 292 292 PRO PRO A . n A 1 296 GLU 296 293 293 GLU GLU A . n A 1 297 PRO 297 294 294 PRO PRO A . n A 1 298 VAL 298 295 295 VAL VAL A . n A 1 299 GLY 299 296 296 GLY GLY A . n A 1 300 PRO 300 297 297 PRO PRO A . n A 1 301 LEU 301 298 298 LEU LEU A . n A 1 302 ALA 302 299 299 ALA ALA A . n A 1 303 ILE 303 300 300 ILE ILE A . n A 1 304 VAL 304 301 301 VAL VAL A . n A 1 305 GLY 305 302 302 GLY GLY A . n A 1 306 ASP 306 303 303 ASP ASP A . n A 1 307 ALA 307 304 304 ALA ALA A . n A 1 308 PHE 308 305 305 PHE PHE A . n A 1 309 LEU 309 306 306 LEU LEU A . n A 1 310 ARG 310 307 307 ARG ARG A . n A 1 311 LYS 311 308 308 LYS LYS A . n A 1 312 TYR 312 309 309 TYR TYR A . n A 1 313 TYR 313 310 310 TYR TYR A . n A 1 314 SER 314 311 311 SER SER A . n A 1 315 ILE 315 312 312 ILE ILE A . n A 1 316 TYR 316 313 313 TYR TYR A . n A 1 317 ASP 317 314 314 ASP ASP A . n A 1 318 ILE 318 315 315 ILE ILE A . n A 1 319 GLY 319 316 316 GLY GLY A . n A 1 320 ASN 320 317 317 ASN ASN A . n A 1 321 ASN 321 318 318 ASN ASN A . n A 1 322 ALA 322 319 319 ALA ALA A . n A 1 323 VAL 323 320 320 VAL VAL A . n A 1 324 GLY 324 321 321 GLY GLY A . n A 1 325 LEU 325 322 322 LEU LEU A . n A 1 326 ALA 326 323 323 ALA ALA A . n A 1 327 LYS 327 324 324 LYS LYS A . n A 1 328 ALA 328 325 325 ALA ALA A . n A 1 329 ILE 329 326 326 ILE ILE A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 2Y2 1 338 338 2Y2 2Y2 A . D 4 NAG 1 337 337 NAG NDG A . E 5 HOH 1 501 501 HOH HOH A . E 5 HOH 2 502 502 HOH HOH A . E 5 HOH 3 505 505 HOH HOH A . E 5 HOH 4 510 510 HOH HOH A . E 5 HOH 5 512 512 HOH HOH A . E 5 HOH 6 514 514 HOH HOH A . E 5 HOH 7 515 515 HOH HOH A . E 5 HOH 8 517 517 HOH HOH A . E 5 HOH 9 522 522 HOH HOH A . E 5 HOH 10 524 524 HOH HOH A . E 5 HOH 11 525 525 HOH HOH A . E 5 HOH 12 529 529 HOH HOH A . E 5 HOH 13 532 532 HOH HOH A . E 5 HOH 14 534 534 HOH HOH A . E 5 HOH 15 535 535 HOH HOH A . E 5 HOH 16 537 537 HOH HOH A . E 5 HOH 17 538 538 HOH HOH A . E 5 HOH 18 539 539 HOH HOH A . E 5 HOH 19 540 540 HOH HOH A . E 5 HOH 20 543 543 HOH HOH A . E 5 HOH 21 544 544 HOH HOH A . E 5 HOH 22 546 546 HOH HOH A . E 5 HOH 23 547 547 HOH HOH A . E 5 HOH 24 549 549 HOH HOH A . E 5 HOH 25 553 553 HOH HOH A . E 5 HOH 26 555 555 HOH HOH A . E 5 HOH 27 557 557 HOH HOH A . E 5 HOH 28 558 558 HOH HOH A . E 5 HOH 29 559 559 HOH HOH A . E 5 HOH 30 561 561 HOH HOH A . E 5 HOH 31 562 562 HOH HOH A . E 5 HOH 32 566 566 HOH HOH A . E 5 HOH 33 567 567 HOH HOH A . E 5 HOH 34 572 572 HOH HOH A . E 5 HOH 35 573 573 HOH HOH A . E 5 HOH 36 574 574 HOH HOH A . E 5 HOH 37 576 576 HOH HOH A . E 5 HOH 38 577 577 HOH HOH A . E 5 HOH 39 578 578 HOH HOH A . E 5 HOH 40 579 579 HOH HOH A . E 5 HOH 41 580 580 HOH HOH A . E 5 HOH 42 581 581 HOH HOH A . E 5 HOH 43 582 582 HOH HOH A . E 5 HOH 44 583 583 HOH HOH A . E 5 HOH 45 602 602 HOH HOH A . E 5 HOH 46 605 605 HOH HOH A . E 5 HOH 47 606 606 HOH HOH A . E 5 HOH 48 616 616 HOH HOH A . E 5 HOH 49 617 617 HOH HOH A . E 5 HOH 50 619 619 HOH HOH A . E 5 HOH 51 621 621 HOH HOH A . E 5 HOH 52 622 622 HOH HOH A . E 5 HOH 53 626 626 HOH HOH A . E 5 HOH 54 629 629 HOH HOH A . E 5 HOH 55 631 631 HOH HOH A . E 5 HOH 56 632 632 HOH HOH A . E 5 HOH 57 633 633 HOH HOH A . E 5 HOH 58 634 634 HOH HOH A . E 5 HOH 59 639 639 HOH HOH A . E 5 HOH 60 640 640 HOH HOH A . E 5 HOH 61 642 642 HOH HOH A . E 5 HOH 62 644 644 HOH HOH A . E 5 HOH 63 645 645 HOH HOH A . E 5 HOH 64 648 648 HOH HOH A . E 5 HOH 65 650 650 HOH HOH A . E 5 HOH 66 653 653 HOH HOH A . E 5 HOH 67 655 655 HOH HOH A . E 5 HOH 68 656 656 HOH HOH A . E 5 HOH 69 657 657 HOH HOH A . E 5 HOH 70 660 660 HOH HOH A . E 5 HOH 71 661 661 HOH HOH A . E 5 HOH 72 662 662 HOH HOH A . E 5 HOH 73 663 663 HOH HOH A . E 5 HOH 74 664 664 HOH HOH A . E 5 HOH 75 665 665 HOH HOH A . E 5 HOH 76 666 666 HOH HOH A . E 5 HOH 77 667 667 HOH HOH A . E 5 HOH 78 669 669 HOH HOH A . E 5 HOH 79 673 673 HOH HOH A . E 5 HOH 80 675 675 HOH HOH A . E 5 HOH 81 676 676 HOH HOH A . E 5 HOH 82 677 677 HOH HOH A . E 5 HOH 83 679 679 HOH HOH A . E 5 HOH 84 680 680 HOH HOH A . E 5 HOH 85 681 681 HOH HOH A . E 5 HOH 86 683 683 HOH HOH A . E 5 HOH 87 686 686 HOH HOH A . E 5 HOH 88 694 694 HOH HOH A . E 5 HOH 89 695 695 HOH HOH A . E 5 HOH 90 696 696 HOH HOH A . E 5 HOH 91 697 697 HOH HOH A . E 5 HOH 92 698 698 HOH HOH A . E 5 HOH 93 699 699 HOH HOH A . E 5 HOH 94 700 700 HOH HOH A . E 5 HOH 95 701 701 HOH HOH A . E 5 HOH 96 702 702 HOH HOH A . E 5 HOH 97 703 703 HOH HOH A . E 5 HOH 98 704 704 HOH HOH A . E 5 HOH 99 707 707 HOH HOH A . E 5 HOH 100 708 708 HOH HOH A . E 5 HOH 101 709 709 HOH HOH A . # _pdbx_molecule_features.prd_id PRD_000563 _pdbx_molecule_features.name CP-108,420 _pdbx_molecule_features.type Peptide-like _pdbx_molecule_features.class 'Enzyme inhibitor' _pdbx_molecule_features.details ? # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_000563 _pdbx_molecule.asym_id C # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A ASN 68 A ASN 67 ? ASN 'GLYCOSYLATION SITE' 2 A ASN 269 A ASN 266 ? ASN 'GLYCOSYLATION SITE' # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D,E 2 1,2 A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 2 'ABSA (A^2)' 8000 ? 2 MORE 20 ? 2 'SSA (A^2)' 26600 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 6_555 -x,-x+y,-z+2/3 -0.5000000000 -0.8660254038 0.0000000000 0.0000000000 -0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 73.4800000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2000-09-20 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2012-12-12 5 'Structure model' 1 4 2017-10-04 6 'Structure model' 2 0 2020-07-29 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 6 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Atomic model' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Non-polymer description' 6 3 'Structure model' 'Structure summary' 7 3 'Structure model' 'Version format compliance' 8 4 'Structure model' Other 9 5 'Structure model' 'Refinement description' 10 6 'Structure model' Advisory 11 6 'Structure model' 'Atomic model' 12 6 'Structure model' 'Data collection' 13 6 'Structure model' 'Database references' 14 6 'Structure model' 'Derived calculations' 15 6 'Structure model' 'Non-polymer description' 16 6 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' software 2 6 'Structure model' atom_site 3 6 'Structure model' chem_comp 4 6 'Structure model' database_PDB_caveat 5 6 'Structure model' entity 6 6 'Structure model' pdbx_branch_scheme 7 6 'Structure model' pdbx_chem_comp_identifier 8 6 'Structure model' pdbx_entity_branch 9 6 'Structure model' pdbx_entity_branch_descriptor 10 6 'Structure model' pdbx_entity_branch_link 11 6 'Structure model' pdbx_entity_branch_list 12 6 'Structure model' pdbx_entity_nonpoly 13 6 'Structure model' pdbx_molecule 14 6 'Structure model' pdbx_nonpoly_scheme 15 6 'Structure model' pdbx_struct_assembly_gen 16 6 'Structure model' pdbx_validate_chiral 17 6 'Structure model' struct_asym 18 6 'Structure model' struct_conn 19 6 'Structure model' struct_ref_seq_dif 20 6 'Structure model' struct_site 21 6 'Structure model' struct_site_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_software.name' 2 6 'Structure model' '_atom_site.B_iso_or_equiv' 3 6 'Structure model' '_atom_site.Cartn_x' 4 6 'Structure model' '_atom_site.Cartn_y' 5 6 'Structure model' '_atom_site.Cartn_z' 6 6 'Structure model' '_atom_site.auth_asym_id' 7 6 'Structure model' '_atom_site.auth_atom_id' 8 6 'Structure model' '_atom_site.auth_comp_id' 9 6 'Structure model' '_atom_site.auth_seq_id' 10 6 'Structure model' '_atom_site.label_asym_id' 11 6 'Structure model' '_atom_site.label_atom_id' 12 6 'Structure model' '_atom_site.label_comp_id' 13 6 'Structure model' '_atom_site.label_entity_id' 14 6 'Structure model' '_atom_site.type_symbol' 15 6 'Structure model' '_chem_comp.formula' 16 6 'Structure model' '_chem_comp.formula_weight' 17 6 'Structure model' '_chem_comp.id' 18 6 'Structure model' '_chem_comp.mon_nstd_flag' 19 6 'Structure model' '_chem_comp.name' 20 6 'Structure model' '_chem_comp.type' 21 6 'Structure model' '_pdbx_molecule.asym_id' 22 6 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 23 6 'Structure model' '_struct_conn.pdbx_dist_value' 24 6 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 25 6 'Structure model' '_struct_conn.pdbx_role' 26 6 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 27 6 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 28 6 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 29 6 'Structure model' '_struct_conn.ptnr1_label_asym_id' 30 6 'Structure model' '_struct_conn.ptnr1_label_atom_id' 31 6 'Structure model' '_struct_conn.ptnr1_label_comp_id' 32 6 'Structure model' '_struct_conn.ptnr1_label_seq_id' 33 6 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 34 6 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 35 6 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 36 6 'Structure model' '_struct_conn.ptnr2_label_asym_id' 37 6 'Structure model' '_struct_conn.ptnr2_label_comp_id' 38 6 'Structure model' '_struct_ref_seq_dif.details' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MOSFLM 'data reduction' . ? 1 ROTAVATA 'data reduction' . ? 2 AMoRE phasing . ? 3 RESTRAIN refinement . ? 4 CCP4 'data scaling' '(AGROVATA' ? 5 ROTAVATA 'data scaling' . ? 6 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 OE2 _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 GLU _pdbx_validate_symm_contact.auth_seq_id_1 205 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 OE2 _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 GLU _pdbx_validate_symm_contact.auth_seq_id_2 205 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 5_675 _pdbx_validate_symm_contact.dist 2.16 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 C A PRO 23 ? ? N A PRO 24 ? ? CA A PRO 24 ? ? 131.31 119.30 12.01 1.50 Y 2 1 C A PRO 23 ? ? N A PRO 24 ? ? CD A PRO 24 ? ? 115.43 128.40 -12.97 2.10 Y 3 1 C A GLY 34 ? ? N A SER 35 ? ? CA A SER 35 ? ? 137.18 121.70 15.48 2.50 Y 4 1 CB A ILE 128 ? ? CG1 A ILE 128 ? ? CD1 A ILE 128 ? ? 93.57 113.90 -20.33 2.80 N 5 1 CA A VAL 130 ? ? CB A VAL 130 ? ? CG2 A VAL 130 ? ? 101.29 110.90 -9.61 1.50 N 6 1 CG A PHE 153 ? ? CD2 A PHE 153 ? ? CE2 A PHE 153 ? ? 113.73 120.80 -7.07 1.10 N 7 1 C A GLY 200 ? ? N A ASP 201 ? ? CA A ASP 201 ? ? 138.24 121.70 16.54 2.50 Y 8 1 CB A LEU 220 ? ? CG A LEU 220 ? ? CD1 A LEU 220 ? ? 121.49 111.00 10.49 1.70 N 9 1 N A TRP 241 ? ? CA A TRP 241 ? ? CB A TRP 241 ? ? 121.89 110.60 11.29 1.80 N 10 1 CA A TRP 241 ? ? CB A TRP 241 ? ? CG A TRP 241 ? ? 127.60 113.70 13.90 1.90 N 11 1 NE A ARG 252 ? ? CZ A ARG 252 ? ? NH2 A ARG 252 ? ? 117.24 120.30 -3.06 0.50 N 12 1 CA A VAL 278 ? ? CB A VAL 278 ? ? CG1 A VAL 278 ? ? 124.22 110.90 13.32 1.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TRP A 39 ? ? -171.10 136.25 2 1 GLU A 59 ? ? -60.12 10.08 3 1 ASN A 67 ? ? -138.61 -53.53 4 1 ASP A 87 ? ? 166.96 -171.09 5 1 ASP A 131 ? ? 54.45 13.61 6 1 SER A 159 ? ? -76.29 -77.41 7 1 ASP A 159 B ? -107.64 -155.05 8 1 THR A 159 C ? -166.75 -42.22 9 1 ALA A 188 ? ? -156.02 -67.64 10 1 LEU A 220 ? ? -108.64 -144.57 11 1 LYS A 239 ? ? -64.39 87.69 12 1 TRP A 241 ? ? -26.81 -40.71 # loop_ _pdbx_validate_chiral.id _pdbx_validate_chiral.PDB_model_num _pdbx_validate_chiral.auth_atom_id _pdbx_validate_chiral.label_alt_id _pdbx_validate_chiral.auth_asym_id _pdbx_validate_chiral.auth_comp_id _pdbx_validate_chiral.auth_seq_id _pdbx_validate_chiral.PDB_ins_code _pdbx_validate_chiral.details _pdbx_validate_chiral.omega 1 1 CA ? A GLU 160 ? 'WRONG HAND' . 2 1 CA ? A TRP 241 ? PLANAR . 3 1 C23 ? A 2Y2 338 ? PLANAR . 4 1 C1 ? A NAG 337 ? 'WRONG HAND' . # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 NAG 1 B NAG 1 A NAG 332 n B 2 NAG 2 B NAG 2 A NAG 333 n B 2 BMA 3 B BMA 3 A BMA 334 n B 2 BMA 4 B BMA 4 A BMA 335 n B 2 BGC 5 B BGC 5 A BGC 336 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BGC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpb BGC 'COMMON NAME' GMML 1.0 b-D-glucopyranose BGC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Glcp BGC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Glc BMA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpb BMA 'COMMON NAME' GMML 1.0 b-D-mannopyranose BMA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Manp BMA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DGlcpb1-2DManpb1-3DManpb1-4DGlcpNAcb1-4DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/3,5,4/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a2122h-1b_1-5]/1-1-2-2-3/a4-b1_b4-c1_c3-d1_d2-e1' WURCS PDB2Glycan 1.1.0 3 2 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{[(3+1)][b-D-Manp]{[(2+1)][b-D-Glcp]{}}}}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 2 2 NAG C1 O1 1 NAG O4 HO4 sing ? 2 2 3 BMA C1 O1 2 NAG O4 HO4 sing ? 3 2 4 BMA C1 O1 3 BMA O3 HO3 sing ? 4 2 5 BGC C1 O1 4 BMA O2 HO2 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 NAG 1 n 2 NAG 2 n 2 BMA 3 n 2 BMA 4 n 2 BGC 5 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 ;N-[(2R)-1-{[(2S,3R,5R)-1-cyclohexyl-3-hydroxy-5-{[2-(morpholin-4-yl)ethyl]carbamoyl}oct-7-yn-2-yl]amino}-3-(methylsulfa nyl)-1-oxopropan-2-yl]-1H-benzimidazole-2-carboxamide ; 2Y2 4 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 5 water HOH #