data_1H99 # _entry.id 1H99 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1H99 PDBE EBI-5968 WWPDB D_1290005968 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1H99 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2001-03-06 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Van Tilbeurgh, H.' 1 'Declerck, N.' 2 # _citation.id primary _citation.title 'Crystal Structure of an Activated Form of the Pts Regulation Domain from the Lict Transcriptional Antitrminator' _citation.journal_abbrev 'Embo J.' _citation.journal_volume 20 _citation.page_first 3789 _citation.page_last ? _citation.year 2001 _citation.journal_id_ASTM EMJODG _citation.country UK _citation.journal_id_ISSN 0261-4189 _citation.journal_id_CSD 0897 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 11447120 _citation.pdbx_database_id_DOI 10.1093/EMBOJ/20.14.3789 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Van Tilbeurgh, H.' 1 primary 'Lecoq, D.' 2 primary 'Declerck, N.' 3 # _cell.entry_id 1H99 _cell.length_a 78.250 _cell.length_b 129.710 _cell.length_c 50.710 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1H99 _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'TRANSCRIPTION ANTITERMINATOR LICT' 26397.344 1 ? YES 'PTS-REGULATORY DOMAIN RESIDUES 57-277' ? 2 water nat water 18.015 191 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name LICT-ANTITERMINATOR # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GAMEKFKTLLYDIPIECMEVSEEIISYAKLQLGKKLNDSIYVSLTDHINFAIQRNQKGLDIKNALLWETKRLYKDEFAIG KEALVMVKNKTGVSLPEDEAGFIALHIVNAELNEEMPNIINITKVMEEILSIVKYHFKIEFNEESLHYYRFVTDLKFFAQ RLFNGTHMESEDDFLLDTVKEKYHRAYECTKKIQTYIEREYEHKLTSDELLYLTIDIERVVKQA ; _entity_poly.pdbx_seq_one_letter_code_can ;GAMEKFKTLLYDIPIECMEVSEEIISYAKLQLGKKLNDSIYVSLTDHINFAIQRNQKGLDIKNALLWETKRLYKDEFAIG KEALVMVKNKTGVSLPEDEAGFIALHIVNAELNEEMPNIINITKVMEEILSIVKYHFKIEFNEESLHYYRFVTDLKFFAQ RLFNGTHMESEDDFLLDTVKEKYHRAYECTKKIQTYIEREYEHKLTSDELLYLTIDIERVVKQA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ALA n 1 3 MET n 1 4 GLU n 1 5 LYS n 1 6 PHE n 1 7 LYS n 1 8 THR n 1 9 LEU n 1 10 LEU n 1 11 TYR n 1 12 ASP n 1 13 ILE n 1 14 PRO n 1 15 ILE n 1 16 GLU n 1 17 CYS n 1 18 MET n 1 19 GLU n 1 20 VAL n 1 21 SER n 1 22 GLU n 1 23 GLU n 1 24 ILE n 1 25 ILE n 1 26 SER n 1 27 TYR n 1 28 ALA n 1 29 LYS n 1 30 LEU n 1 31 GLN n 1 32 LEU n 1 33 GLY n 1 34 LYS n 1 35 LYS n 1 36 LEU n 1 37 ASN n 1 38 ASP n 1 39 SER n 1 40 ILE n 1 41 TYR n 1 42 VAL n 1 43 SER n 1 44 LEU n 1 45 THR n 1 46 ASP n 1 47 HIS n 1 48 ILE n 1 49 ASN n 1 50 PHE n 1 51 ALA n 1 52 ILE n 1 53 GLN n 1 54 ARG n 1 55 ASN n 1 56 GLN n 1 57 LYS n 1 58 GLY n 1 59 LEU n 1 60 ASP n 1 61 ILE n 1 62 LYS n 1 63 ASN n 1 64 ALA n 1 65 LEU n 1 66 LEU n 1 67 TRP n 1 68 GLU n 1 69 THR n 1 70 LYS n 1 71 ARG n 1 72 LEU n 1 73 TYR n 1 74 LYS n 1 75 ASP n 1 76 GLU n 1 77 PHE n 1 78 ALA n 1 79 ILE n 1 80 GLY n 1 81 LYS n 1 82 GLU n 1 83 ALA n 1 84 LEU n 1 85 VAL n 1 86 MET n 1 87 VAL n 1 88 LYS n 1 89 ASN n 1 90 LYS n 1 91 THR n 1 92 GLY n 1 93 VAL n 1 94 SER n 1 95 LEU n 1 96 PRO n 1 97 GLU n 1 98 ASP n 1 99 GLU n 1 100 ALA n 1 101 GLY n 1 102 PHE n 1 103 ILE n 1 104 ALA n 1 105 LEU n 1 106 HIS n 1 107 ILE n 1 108 VAL n 1 109 ASN n 1 110 ALA n 1 111 GLU n 1 112 LEU n 1 113 ASN n 1 114 GLU n 1 115 GLU n 1 116 MET n 1 117 PRO n 1 118 ASN n 1 119 ILE n 1 120 ILE n 1 121 ASN n 1 122 ILE n 1 123 THR n 1 124 LYS n 1 125 VAL n 1 126 MET n 1 127 GLU n 1 128 GLU n 1 129 ILE n 1 130 LEU n 1 131 SER n 1 132 ILE n 1 133 VAL n 1 134 LYS n 1 135 TYR n 1 136 HIS n 1 137 PHE n 1 138 LYS n 1 139 ILE n 1 140 GLU n 1 141 PHE n 1 142 ASN n 1 143 GLU n 1 144 GLU n 1 145 SER n 1 146 LEU n 1 147 HIS n 1 148 TYR n 1 149 TYR n 1 150 ARG n 1 151 PHE n 1 152 VAL n 1 153 THR n 1 154 ASP n 1 155 LEU n 1 156 LYS n 1 157 PHE n 1 158 PHE n 1 159 ALA n 1 160 GLN n 1 161 ARG n 1 162 LEU n 1 163 PHE n 1 164 ASN n 1 165 GLY n 1 166 THR n 1 167 HIS n 1 168 MET n 1 169 GLU n 1 170 SER n 1 171 GLU n 1 172 ASP n 1 173 ASP n 1 174 PHE n 1 175 LEU n 1 176 LEU n 1 177 ASP n 1 178 THR n 1 179 VAL n 1 180 LYS n 1 181 GLU n 1 182 LYS n 1 183 TYR n 1 184 HIS n 1 185 ARG n 1 186 ALA n 1 187 TYR n 1 188 GLU n 1 189 CYS n 1 190 THR n 1 191 LYS n 1 192 LYS n 1 193 ILE n 1 194 GLN n 1 195 THR n 1 196 TYR n 1 197 ILE n 1 198 GLU n 1 199 ARG n 1 200 GLU n 1 201 TYR n 1 202 GLU n 1 203 HIS n 1 204 LYS n 1 205 LEU n 1 206 THR n 1 207 SER n 1 208 ASP n 1 209 GLU n 1 210 LEU n 1 211 LEU n 1 212 TYR n 1 213 LEU n 1 214 THR n 1 215 ILE n 1 216 ASP n 1 217 ILE n 1 218 GLU n 1 219 ARG n 1 220 VAL n 1 221 VAL n 1 222 LYS n 1 223 GLN n 1 224 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene LICT _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'BACILLUS SUBTILIS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1423 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 PDB 1H99 1 ? ? 1H99 ? 2 UNP LICT_BACSU 1 ? ? P39805 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1H99 A 1 ? 3 ? 1H99 54 ? 56 ? 54 56 2 2 1H99 A 4 ? 224 ? P39805 57 ? 277 ? 57 277 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1H99 ASP A 154 ? UNP P39805 HIS 207 'engineered mutation' 207 1 1 1H99 ASP A 216 ? UNP P39805 HIS 269 'engineered mutation' 269 2 1 1H99 GLU A 127 ? UNP P39805 GLN 180 conflict 180 3 1 1H99 GLU A 171 ? UNP P39805 GLN 224 conflict 224 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1H99 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.44 _exptl_crystal.density_percent_sol 49.53 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.00 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '200 MM MG(AC)2, 10% PEG8000, pH 5.00' # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector ? _diffrn_detector.type ? _diffrn_detector.pdbx_collection_date 1999-11-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.979 1.0 2 0.886 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE BM14' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline BM14 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.979, 0.979, 0.886' # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 1H99 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 20.000 _reflns.d_resolution_high 1.550 _reflns.number_obs 37674 _reflns.number_all ? _reflns.percent_possible_obs 99.2 _reflns.pdbx_Rmerge_I_obs 0.07000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 15.6000 _reflns.B_iso_Wilson_estimate 20.8 _reflns.pdbx_redundancy 3.100 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.55 _reflns_shell.d_res_low 1.65 _reflns_shell.percent_possible_all 98.2 _reflns_shell.Rmerge_I_obs 0.13200 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 4.400 _reflns_shell.pdbx_redundancy ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 1H99 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 37578 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.98 _refine.ls_d_res_high 1.55 _refine.ls_percent_reflns_obs 99.2 _refine.ls_R_factor_obs 0.224 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.224 _refine.ls_R_factor_R_free 0.238 _refine.ls_R_factor_R_free_error 0.005 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 7.0 _refine.ls_number_reflns_R_free 2640 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 19.8 _refine.aniso_B[1][1] 2.23 _refine.aniso_B[2][2] -1.44 _refine.aniso_B[3][3] -0.79 _refine.aniso_B[1][2] 0 _refine.aniso_B[1][3] 0 _refine.aniso_B[2][3] 0 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.345048 _refine.solvent_model_param_bsol 65.2798 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.entry_id 1H99 _refine_analyze.Luzzati_coordinate_error_obs 0.19 _refine_analyze.Luzzati_sigma_a_obs 0.06 _refine_analyze.Luzzati_d_res_low_obs 5 _refine_analyze.Luzzati_coordinate_error_free 0.2 _refine_analyze.Luzzati_sigma_a_free 0.08 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1827 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 191 _refine_hist.number_atoms_total 2018 _refine_hist.d_res_high 1.55 _refine_hist.d_res_low 19.98 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.004 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.0 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 18.8 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.69 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.09 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 1.65 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 3.64 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 4.06 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 1.55 _refine_ls_shell.d_res_low 1.65 _refine_ls_shell.number_reflns_R_work 5647 _refine_ls_shell.R_factor_R_work 0.218 _refine_ls_shell.percent_reflns_obs 98 _refine_ls_shell.R_factor_R_free 0.232 _refine_ls_shell.R_factor_R_free_error 0.011 _refine_ls_shell.percent_reflns_R_free 7.3 _refine_ls_shell.number_reflns_R_free 446 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.pdbx_refine_id _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file 'X-RAY DIFFRACTION' 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 WATER.PARAM WATER.TOP # _struct.entry_id 1H99 _struct.title 'PRD of LicT antiterminator from Bacillus subtilis' _struct.pdbx_descriptor 'TRANSCRIPTION ANTITERMINATOR LICT' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1H99 _struct_keywords.pdbx_keywords 'TRANSCRIPTIONAL ANTITERMINATOR' _struct_keywords.text 'TRANSCRIPTIONAL ANTITERMINATOR, PTS REGULATORY DOMAIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 MET A 3 ? LYS A 7 ? MET A 56 LYS A 60 5 ? 5 HELX_P HELX_P2 2 PRO A 14 ? GLY A 33 ? PRO A 67 GLY A 86 1 ? 20 HELX_P HELX_P3 3 ASP A 38 ? LYS A 57 ? ASP A 91 LYS A 110 1 ? 20 HELX_P HELX_P4 4 LEU A 65 ? TYR A 73 ? LEU A 118 TYR A 126 1 ? 9 HELX_P HELX_P5 5 TYR A 73 ? GLY A 92 ? TYR A 126 GLY A 145 1 ? 20 HELX_P HELX_P6 6 PRO A 96 ? LEU A 112 ? PRO A 149 LEU A 165 1 ? 17 HELX_P HELX_P7 7 MET A 116 ? LYS A 138 ? MET A 169 LYS A 191 1 ? 23 HELX_P HELX_P8 8 SER A 145 ? GLY A 165 ? SER A 198 GLY A 218 1 ? 21 HELX_P HELX_P9 9 ASP A 173 ? TYR A 183 ? ASP A 226 TYR A 236 1 ? 11 HELX_P HELX_P10 10 TYR A 183 ? GLU A 202 ? TYR A 236 GLU A 255 1 ? 20 HELX_P HELX_P11 11 THR A 206 ? LYS A 222 ? THR A 259 LYS A 275 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _database_PDB_matrix.entry_id 1H99 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1H99 _atom_sites.fract_transf_matrix[1][1] 0.012779 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.007709 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019720 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 54 54 GLY GLY A . n A 1 2 ALA 2 55 55 ALA ALA A . n A 1 3 MET 3 56 56 MET MET A . n A 1 4 GLU 4 57 57 GLU GLU A . n A 1 5 LYS 5 58 58 LYS LYS A . n A 1 6 PHE 6 59 59 PHE PHE A . n A 1 7 LYS 7 60 60 LYS LYS A . n A 1 8 THR 8 61 61 THR THR A . n A 1 9 LEU 9 62 62 LEU LEU A . n A 1 10 LEU 10 63 63 LEU LEU A . n A 1 11 TYR 11 64 64 TYR TYR A . n A 1 12 ASP 12 65 65 ASP ASP A . n A 1 13 ILE 13 66 66 ILE ILE A . n A 1 14 PRO 14 67 67 PRO PRO A . n A 1 15 ILE 15 68 68 ILE ILE A . n A 1 16 GLU 16 69 69 GLU GLU A . n A 1 17 CYS 17 70 70 CYS CYS A . n A 1 18 MET 18 71 71 MET MET A . n A 1 19 GLU 19 72 72 GLU GLU A . n A 1 20 VAL 20 73 73 VAL VAL A . n A 1 21 SER 21 74 74 SER SER A . n A 1 22 GLU 22 75 75 GLU GLU A . n A 1 23 GLU 23 76 76 GLU GLU A . n A 1 24 ILE 24 77 77 ILE ILE A . n A 1 25 ILE 25 78 78 ILE ILE A . n A 1 26 SER 26 79 79 SER SER A . n A 1 27 TYR 27 80 80 TYR TYR A . n A 1 28 ALA 28 81 81 ALA ALA A . n A 1 29 LYS 29 82 82 LYS LYS A . n A 1 30 LEU 30 83 83 LEU LEU A . n A 1 31 GLN 31 84 84 GLN GLN A . n A 1 32 LEU 32 85 85 LEU LEU A . n A 1 33 GLY 33 86 86 GLY GLY A . n A 1 34 LYS 34 87 87 LYS LYS A . n A 1 35 LYS 35 88 88 LYS LYS A . n A 1 36 LEU 36 89 89 LEU LEU A . n A 1 37 ASN 37 90 90 ASN ASN A . n A 1 38 ASP 38 91 91 ASP ASP A . n A 1 39 SER 39 92 92 SER SER A . n A 1 40 ILE 40 93 93 ILE ILE A . n A 1 41 TYR 41 94 94 TYR TYR A . n A 1 42 VAL 42 95 95 VAL VAL A . n A 1 43 SER 43 96 96 SER SER A . n A 1 44 LEU 44 97 97 LEU LEU A . n A 1 45 THR 45 98 98 THR THR A . n A 1 46 ASP 46 99 99 ASP ASP A . n A 1 47 HIS 47 100 100 HIS HIS A . n A 1 48 ILE 48 101 101 ILE ILE A . n A 1 49 ASN 49 102 102 ASN ASN A . n A 1 50 PHE 50 103 103 PHE PHE A . n A 1 51 ALA 51 104 104 ALA ALA A . n A 1 52 ILE 52 105 105 ILE ILE A . n A 1 53 GLN 53 106 106 GLN GLN A . n A 1 54 ARG 54 107 107 ARG ARG A . n A 1 55 ASN 55 108 108 ASN ASN A . n A 1 56 GLN 56 109 109 GLN GLN A . n A 1 57 LYS 57 110 110 LYS LYS A . n A 1 58 GLY 58 111 111 GLY GLY A . n A 1 59 LEU 59 112 112 LEU LEU A . n A 1 60 ASP 60 113 113 ASP ASP A . n A 1 61 ILE 61 114 114 ILE ILE A . n A 1 62 LYS 62 115 115 LYS LYS A . n A 1 63 ASN 63 116 116 ASN ASN A . n A 1 64 ALA 64 117 117 ALA ALA A . n A 1 65 LEU 65 118 118 LEU LEU A . n A 1 66 LEU 66 119 119 LEU LEU A . n A 1 67 TRP 67 120 120 TRP TRP A . n A 1 68 GLU 68 121 121 GLU GLU A . n A 1 69 THR 69 122 122 THR THR A . n A 1 70 LYS 70 123 123 LYS LYS A . n A 1 71 ARG 71 124 124 ARG ARG A . n A 1 72 LEU 72 125 125 LEU LEU A . n A 1 73 TYR 73 126 126 TYR TYR A . n A 1 74 LYS 74 127 127 LYS LYS A . n A 1 75 ASP 75 128 128 ASP ASP A . n A 1 76 GLU 76 129 129 GLU GLU A . n A 1 77 PHE 77 130 130 PHE PHE A . n A 1 78 ALA 78 131 131 ALA ALA A . n A 1 79 ILE 79 132 132 ILE ILE A . n A 1 80 GLY 80 133 133 GLY GLY A . n A 1 81 LYS 81 134 134 LYS LYS A . n A 1 82 GLU 82 135 135 GLU GLU A . n A 1 83 ALA 83 136 136 ALA ALA A . n A 1 84 LEU 84 137 137 LEU LEU A . n A 1 85 VAL 85 138 138 VAL VAL A . n A 1 86 MET 86 139 139 MET MET A . n A 1 87 VAL 87 140 140 VAL VAL A . n A 1 88 LYS 88 141 141 LYS LYS A . n A 1 89 ASN 89 142 142 ASN ASN A . n A 1 90 LYS 90 143 143 LYS LYS A . n A 1 91 THR 91 144 144 THR THR A . n A 1 92 GLY 92 145 145 GLY GLY A . n A 1 93 VAL 93 146 146 VAL VAL A . n A 1 94 SER 94 147 147 SER SER A . n A 1 95 LEU 95 148 148 LEU LEU A . n A 1 96 PRO 96 149 149 PRO PRO A . n A 1 97 GLU 97 150 150 GLU GLU A . n A 1 98 ASP 98 151 151 ASP ASP A . n A 1 99 GLU 99 152 152 GLU GLU A . n A 1 100 ALA 100 153 153 ALA ALA A . n A 1 101 GLY 101 154 154 GLY GLY A . n A 1 102 PHE 102 155 155 PHE PHE A . n A 1 103 ILE 103 156 156 ILE ILE A . n A 1 104 ALA 104 157 157 ALA ALA A . n A 1 105 LEU 105 158 158 LEU LEU A . n A 1 106 HIS 106 159 159 HIS HIS A . n A 1 107 ILE 107 160 160 ILE ILE A . n A 1 108 VAL 108 161 161 VAL VAL A . n A 1 109 ASN 109 162 162 ASN ASN A . n A 1 110 ALA 110 163 163 ALA ALA A . n A 1 111 GLU 111 164 164 GLU GLU A . n A 1 112 LEU 112 165 165 LEU LEU A . n A 1 113 ASN 113 166 166 ASN ASN A . n A 1 114 GLU 114 167 167 GLU GLU A . n A 1 115 GLU 115 168 168 GLU GLU A . n A 1 116 MET 116 169 169 MET MET A . n A 1 117 PRO 117 170 170 PRO PRO A . n A 1 118 ASN 118 171 171 ASN ASN A . n A 1 119 ILE 119 172 172 ILE ILE A . n A 1 120 ILE 120 173 173 ILE ILE A . n A 1 121 ASN 121 174 174 ASN ASN A . n A 1 122 ILE 122 175 175 ILE ILE A . n A 1 123 THR 123 176 176 THR THR A . n A 1 124 LYS 124 177 177 LYS LYS A . n A 1 125 VAL 125 178 178 VAL VAL A . n A 1 126 MET 126 179 179 MET MET A . n A 1 127 GLU 127 180 180 GLU GLU A . n A 1 128 GLU 128 181 181 GLU GLU A . n A 1 129 ILE 129 182 182 ILE ILE A . n A 1 130 LEU 130 183 183 LEU LEU A . n A 1 131 SER 131 184 184 SER SER A . n A 1 132 ILE 132 185 185 ILE ILE A . n A 1 133 VAL 133 186 186 VAL VAL A . n A 1 134 LYS 134 187 187 LYS LYS A . n A 1 135 TYR 135 188 188 TYR TYR A . n A 1 136 HIS 136 189 189 HIS HIS A . n A 1 137 PHE 137 190 190 PHE PHE A . n A 1 138 LYS 138 191 191 LYS LYS A . n A 1 139 ILE 139 192 192 ILE ILE A . n A 1 140 GLU 140 193 193 GLU GLU A . n A 1 141 PHE 141 194 194 PHE PHE A . n A 1 142 ASN 142 195 195 ASN ASN A . n A 1 143 GLU 143 196 196 GLU GLU A . n A 1 144 GLU 144 197 197 GLU GLU A . n A 1 145 SER 145 198 198 SER SER A . n A 1 146 LEU 146 199 199 LEU LEU A . n A 1 147 HIS 147 200 200 HIS HIS A . n A 1 148 TYR 148 201 201 TYR TYR A . n A 1 149 TYR 149 202 202 TYR TYR A . n A 1 150 ARG 150 203 203 ARG ARG A . n A 1 151 PHE 151 204 204 PHE PHE A . n A 1 152 VAL 152 205 205 VAL VAL A . n A 1 153 THR 153 206 206 THR THR A . n A 1 154 ASP 154 207 207 ASP ASP A . n A 1 155 LEU 155 208 208 LEU LEU A . n A 1 156 LYS 156 209 209 LYS LYS A . n A 1 157 PHE 157 210 210 PHE PHE A . n A 1 158 PHE 158 211 211 PHE PHE A . n A 1 159 ALA 159 212 212 ALA ALA A . n A 1 160 GLN 160 213 213 GLN GLN A . n A 1 161 ARG 161 214 214 ARG ARG A . n A 1 162 LEU 162 215 215 LEU LEU A . n A 1 163 PHE 163 216 216 PHE PHE A . n A 1 164 ASN 164 217 217 ASN ASN A . n A 1 165 GLY 165 218 218 GLY GLY A . n A 1 166 THR 166 219 219 THR THR A . n A 1 167 HIS 167 220 220 HIS HIS A . n A 1 168 MET 168 221 221 MET MET A . n A 1 169 GLU 169 222 ? ? ? A . n A 1 170 SER 170 223 ? ? ? A . n A 1 171 GLU 171 224 224 GLU GLU A . n A 1 172 ASP 172 225 225 ASP ASP A . n A 1 173 ASP 173 226 226 ASP ASP A . n A 1 174 PHE 174 227 227 PHE PHE A . n A 1 175 LEU 175 228 228 LEU LEU A . n A 1 176 LEU 176 229 229 LEU LEU A . n A 1 177 ASP 177 230 230 ASP ASP A . n A 1 178 THR 178 231 231 THR THR A . n A 1 179 VAL 179 232 232 VAL VAL A . n A 1 180 LYS 180 233 233 LYS LYS A . n A 1 181 GLU 181 234 234 GLU GLU A . n A 1 182 LYS 182 235 235 LYS LYS A . n A 1 183 TYR 183 236 236 TYR TYR A . n A 1 184 HIS 184 237 237 HIS HIS A . n A 1 185 ARG 185 238 238 ARG ARG A . n A 1 186 ALA 186 239 239 ALA ALA A . n A 1 187 TYR 187 240 240 TYR TYR A . n A 1 188 GLU 188 241 241 GLU GLU A . n A 1 189 CYS 189 242 242 CYS CYS A . n A 1 190 THR 190 243 243 THR THR A . n A 1 191 LYS 191 244 244 LYS LYS A . n A 1 192 LYS 192 245 245 LYS LYS A . n A 1 193 ILE 193 246 246 ILE ILE A . n A 1 194 GLN 194 247 247 GLN GLN A . n A 1 195 THR 195 248 248 THR THR A . n A 1 196 TYR 196 249 249 TYR TYR A . n A 1 197 ILE 197 250 250 ILE ILE A . n A 1 198 GLU 198 251 251 GLU GLU A . n A 1 199 ARG 199 252 252 ARG ARG A . n A 1 200 GLU 200 253 253 GLU GLU A . n A 1 201 TYR 201 254 254 TYR TYR A . n A 1 202 GLU 202 255 255 GLU GLU A . n A 1 203 HIS 203 256 256 HIS HIS A . n A 1 204 LYS 204 257 257 LYS LYS A . n A 1 205 LEU 205 258 258 LEU LEU A . n A 1 206 THR 206 259 259 THR THR A . n A 1 207 SER 207 260 260 SER SER A . n A 1 208 ASP 208 261 261 ASP ASP A . n A 1 209 GLU 209 262 262 GLU GLU A . n A 1 210 LEU 210 263 263 LEU LEU A . n A 1 211 LEU 211 264 264 LEU LEU A . n A 1 212 TYR 212 265 265 TYR TYR A . n A 1 213 LEU 213 266 266 LEU LEU A . n A 1 214 THR 214 267 267 THR THR A . n A 1 215 ILE 215 268 268 ILE ILE A . n A 1 216 ASP 216 269 269 ASP ASP A . n A 1 217 ILE 217 270 270 ILE ILE A . n A 1 218 GLU 218 271 271 GLU GLU A . n A 1 219 ARG 219 272 272 ARG ARG A . n A 1 220 VAL 220 273 273 VAL VAL A . n A 1 221 VAL 221 274 274 VAL VAL A . n A 1 222 LYS 222 275 275 LYS LYS A . n A 1 223 GLN 223 276 ? ? ? A . n A 1 224 ALA 224 277 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 2001 2001 HOH HOH A . B 2 HOH 2 2002 2002 HOH HOH A . B 2 HOH 3 2003 2003 HOH HOH A . B 2 HOH 4 2004 2004 HOH HOH A . B 2 HOH 5 2005 2005 HOH HOH A . B 2 HOH 6 2006 2006 HOH HOH A . B 2 HOH 7 2007 2007 HOH HOH A . B 2 HOH 8 2008 2008 HOH HOH A . B 2 HOH 9 2009 2009 HOH HOH A . B 2 HOH 10 2010 2010 HOH HOH A . B 2 HOH 11 2011 2011 HOH HOH A . B 2 HOH 12 2012 2012 HOH HOH A . B 2 HOH 13 2013 2013 HOH HOH A . B 2 HOH 14 2014 2014 HOH HOH A . B 2 HOH 15 2015 2015 HOH HOH A . B 2 HOH 16 2016 2016 HOH HOH A . B 2 HOH 17 2017 2017 HOH HOH A . B 2 HOH 18 2018 2018 HOH HOH A . B 2 HOH 19 2019 2019 HOH HOH A . B 2 HOH 20 2020 2020 HOH HOH A . B 2 HOH 21 2021 2021 HOH HOH A . B 2 HOH 22 2022 2022 HOH HOH A . B 2 HOH 23 2023 2023 HOH HOH A . B 2 HOH 24 2024 2024 HOH HOH A . B 2 HOH 25 2025 2025 HOH HOH A . B 2 HOH 26 2026 2026 HOH HOH A . B 2 HOH 27 2027 2027 HOH HOH A . B 2 HOH 28 2028 2028 HOH HOH A . B 2 HOH 29 2029 2029 HOH HOH A . B 2 HOH 30 2030 2030 HOH HOH A . B 2 HOH 31 2031 2031 HOH HOH A . B 2 HOH 32 2032 2032 HOH HOH A . B 2 HOH 33 2033 2033 HOH HOH A . B 2 HOH 34 2034 2034 HOH HOH A . B 2 HOH 35 2035 2035 HOH HOH A . B 2 HOH 36 2036 2036 HOH HOH A . B 2 HOH 37 2037 2037 HOH HOH A . B 2 HOH 38 2038 2038 HOH HOH A . B 2 HOH 39 2039 2039 HOH HOH A . B 2 HOH 40 2040 2040 HOH HOH A . B 2 HOH 41 2041 2041 HOH HOH A . B 2 HOH 42 2042 2042 HOH HOH A . B 2 HOH 43 2043 2043 HOH HOH A . B 2 HOH 44 2044 2044 HOH HOH A . B 2 HOH 45 2045 2045 HOH HOH A . B 2 HOH 46 2046 2046 HOH HOH A . B 2 HOH 47 2047 2047 HOH HOH A . B 2 HOH 48 2048 2048 HOH HOH A . B 2 HOH 49 2049 2049 HOH HOH A . B 2 HOH 50 2050 2050 HOH HOH A . B 2 HOH 51 2051 2051 HOH HOH A . B 2 HOH 52 2052 2052 HOH HOH A . B 2 HOH 53 2053 2053 HOH HOH A . B 2 HOH 54 2054 2054 HOH HOH A . B 2 HOH 55 2055 2055 HOH HOH A . B 2 HOH 56 2056 2056 HOH HOH A . B 2 HOH 57 2057 2057 HOH HOH A . B 2 HOH 58 2058 2058 HOH HOH A . B 2 HOH 59 2059 2059 HOH HOH A . B 2 HOH 60 2060 2060 HOH HOH A . B 2 HOH 61 2061 2061 HOH HOH A . B 2 HOH 62 2062 2062 HOH HOH A . B 2 HOH 63 2063 2063 HOH HOH A . B 2 HOH 64 2064 2064 HOH HOH A . B 2 HOH 65 2065 2065 HOH HOH A . B 2 HOH 66 2066 2066 HOH HOH A . B 2 HOH 67 2067 2067 HOH HOH A . B 2 HOH 68 2068 2068 HOH HOH A . B 2 HOH 69 2069 2069 HOH HOH A . B 2 HOH 70 2070 2070 HOH HOH A . B 2 HOH 71 2071 2071 HOH HOH A . B 2 HOH 72 2072 2072 HOH HOH A . B 2 HOH 73 2073 2073 HOH HOH A . B 2 HOH 74 2074 2074 HOH HOH A . B 2 HOH 75 2075 2075 HOH HOH A . B 2 HOH 76 2076 2076 HOH HOH A . B 2 HOH 77 2077 2077 HOH HOH A . B 2 HOH 78 2078 2078 HOH HOH A . B 2 HOH 79 2079 2079 HOH HOH A . B 2 HOH 80 2080 2080 HOH HOH A . B 2 HOH 81 2081 2081 HOH HOH A . B 2 HOH 82 2082 2082 HOH HOH A . B 2 HOH 83 2083 2083 HOH HOH A . B 2 HOH 84 2084 2084 HOH HOH A . B 2 HOH 85 2085 2085 HOH HOH A . B 2 HOH 86 2086 2086 HOH HOH A . B 2 HOH 87 2087 2087 HOH HOH A . B 2 HOH 88 2088 2088 HOH HOH A . B 2 HOH 89 2089 2089 HOH HOH A . B 2 HOH 90 2090 2090 HOH HOH A . B 2 HOH 91 2091 2091 HOH HOH A . B 2 HOH 92 2092 2092 HOH HOH A . B 2 HOH 93 2093 2093 HOH HOH A . B 2 HOH 94 2094 2094 HOH HOH A . B 2 HOH 95 2095 2095 HOH HOH A . B 2 HOH 96 2096 2096 HOH HOH A . B 2 HOH 97 2097 2097 HOH HOH A . B 2 HOH 98 2098 2098 HOH HOH A . B 2 HOH 99 2099 2099 HOH HOH A . B 2 HOH 100 2100 2100 HOH HOH A . B 2 HOH 101 2101 2101 HOH HOH A . B 2 HOH 102 2102 2102 HOH HOH A . B 2 HOH 103 2103 2103 HOH HOH A . B 2 HOH 104 2104 2104 HOH HOH A . B 2 HOH 105 2105 2105 HOH HOH A . B 2 HOH 106 2106 2106 HOH HOH A . B 2 HOH 107 2107 2107 HOH HOH A . B 2 HOH 108 2108 2108 HOH HOH A . B 2 HOH 109 2109 2109 HOH HOH A . B 2 HOH 110 2110 2110 HOH HOH A . B 2 HOH 111 2111 2111 HOH HOH A . B 2 HOH 112 2112 2112 HOH HOH A . B 2 HOH 113 2113 2113 HOH HOH A . B 2 HOH 114 2114 2114 HOH HOH A . B 2 HOH 115 2115 2115 HOH HOH A . B 2 HOH 116 2116 2116 HOH HOH A . B 2 HOH 117 2117 2117 HOH HOH A . B 2 HOH 118 2118 2118 HOH HOH A . B 2 HOH 119 2119 2119 HOH HOH A . B 2 HOH 120 2120 2120 HOH HOH A . B 2 HOH 121 2121 2121 HOH HOH A . B 2 HOH 122 2122 2122 HOH HOH A . B 2 HOH 123 2123 2123 HOH HOH A . B 2 HOH 124 2124 2124 HOH HOH A . B 2 HOH 125 2125 2125 HOH HOH A . B 2 HOH 126 2126 2126 HOH HOH A . B 2 HOH 127 2127 2127 HOH HOH A . B 2 HOH 128 2128 2128 HOH HOH A . B 2 HOH 129 2129 2129 HOH HOH A . B 2 HOH 130 2130 2130 HOH HOH A . B 2 HOH 131 2131 2131 HOH HOH A . B 2 HOH 132 2132 2132 HOH HOH A . B 2 HOH 133 2133 2133 HOH HOH A . B 2 HOH 134 2134 2134 HOH HOH A . B 2 HOH 135 2135 2135 HOH HOH A . B 2 HOH 136 2136 2136 HOH HOH A . B 2 HOH 137 2137 2137 HOH HOH A . B 2 HOH 138 2138 2138 HOH HOH A . B 2 HOH 139 2139 2139 HOH HOH A . B 2 HOH 140 2140 2140 HOH HOH A . B 2 HOH 141 2141 2141 HOH HOH A . B 2 HOH 142 2142 2142 HOH HOH A . B 2 HOH 143 2143 2143 HOH HOH A . B 2 HOH 144 2144 2144 HOH HOH A . B 2 HOH 145 2145 2145 HOH HOH A . B 2 HOH 146 2146 2146 HOH HOH A . B 2 HOH 147 2147 2147 HOH HOH A . B 2 HOH 148 2148 2148 HOH HOH A . B 2 HOH 149 2149 2149 HOH HOH A . B 2 HOH 150 2150 2150 HOH HOH A . B 2 HOH 151 2151 2151 HOH HOH A . B 2 HOH 152 2152 2152 HOH HOH A . B 2 HOH 153 2153 2153 HOH HOH A . B 2 HOH 154 2154 2154 HOH HOH A . B 2 HOH 155 2155 2155 HOH HOH A . B 2 HOH 156 2156 2156 HOH HOH A . B 2 HOH 157 2157 2157 HOH HOH A . B 2 HOH 158 2158 2158 HOH HOH A . B 2 HOH 159 2159 2159 HOH HOH A . B 2 HOH 160 2160 2160 HOH HOH A . B 2 HOH 161 2161 2161 HOH HOH A . B 2 HOH 162 2162 2162 HOH HOH A . B 2 HOH 163 2163 2163 HOH HOH A . B 2 HOH 164 2164 2164 HOH HOH A . B 2 HOH 165 2165 2165 HOH HOH A . B 2 HOH 166 2166 2166 HOH HOH A . B 2 HOH 167 2167 2167 HOH HOH A . B 2 HOH 168 2168 2168 HOH HOH A . B 2 HOH 169 2169 2169 HOH HOH A . B 2 HOH 170 2170 2170 HOH HOH A . B 2 HOH 171 2171 2171 HOH HOH A . B 2 HOH 172 2172 2172 HOH HOH A . B 2 HOH 173 2173 2173 HOH HOH A . B 2 HOH 174 2174 2174 HOH HOH A . B 2 HOH 175 2175 2175 HOH HOH A . B 2 HOH 176 2176 2176 HOH HOH A . B 2 HOH 177 2177 2177 HOH HOH A . B 2 HOH 178 2178 2178 HOH HOH A . B 2 HOH 179 2179 2179 HOH HOH A . B 2 HOH 180 2180 2180 HOH HOH A . B 2 HOH 181 2181 2181 HOH HOH A . B 2 HOH 182 2182 2182 HOH HOH A . B 2 HOH 183 2183 2183 HOH HOH A . B 2 HOH 184 2184 2184 HOH HOH A . B 2 HOH 185 2185 2185 HOH HOH A . B 2 HOH 186 2186 2186 HOH HOH A . B 2 HOH 187 2187 2187 HOH HOH A . B 2 HOH 188 2188 2188 HOH HOH A . B 2 HOH 189 2189 2189 HOH HOH A . B 2 HOH 190 2190 2190 HOH HOH A . B 2 HOH 191 2191 2191 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 3_655 -x+1,y,-z+1/2 -1.0000000000 0.0000000000 0.0000000000 78.2500000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 25.3550000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2001-08-28 2 'Structure model' 1 1 2011-05-07 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.0 ? 1 DENZO 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 SOLVE phasing . ? 4 # _pdbx_entry_details.entry_id 1H99 _pdbx_entry_details.compound_details ;CHAIN A ENGINEERED MUTATION HIS207ASP, HIS269ASP POSITIVE REGULATION OF THE GLUCANASE OPERON (LICST) ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 NZ A LYS 275 ? ? O A HOH 2191 ? ? 1.18 2 1 CE A LYS 275 ? ? O A HOH 2191 ? ? 1.79 3 1 OE2 A GLU 271 ? ? CE A LYS 275 ? ? 2.09 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 2107 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 2107 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 3_655 _pdbx_validate_symm_contact.dist 1.67 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 63 ? ? -92.88 55.26 2 1 GLU A 196 ? ? -59.47 -3.90 3 1 TYR A 236 ? ? -101.78 51.39 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id ARG _pdbx_validate_planes.auth_asym_id A _pdbx_validate_planes.auth_seq_id 203 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.286 _pdbx_validate_planes.type 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 A LYS 88 ? CG ? A LYS 35 CG 2 1 Y 0 A LYS 88 ? CD ? A LYS 35 CD 3 1 Y 0 A LYS 88 ? CE ? A LYS 35 CE 4 1 Y 0 A LYS 88 ? NZ ? A LYS 35 NZ 5 1 Y 0 A LYS 127 ? CG ? A LYS 74 CG 6 1 Y 0 A LYS 127 ? CD ? A LYS 74 CD 7 1 Y 0 A LYS 127 ? CE ? A LYS 74 CE 8 1 Y 0 A LYS 127 ? NZ ? A LYS 74 NZ 9 1 Y 0 A GLU 180 ? CG ? A GLU 127 CG 10 1 Y 0 A GLU 180 ? CD ? A GLU 127 CD 11 1 Y 0 A GLU 180 ? OE1 ? A GLU 127 OE1 12 1 Y 0 A GLU 180 ? OE2 ? A GLU 127 OE2 13 1 Y 0 A GLU 224 ? CG ? A GLU 171 CG 14 1 Y 0 A GLU 224 ? CD ? A GLU 171 CD 15 1 Y 0 A GLU 224 ? OE1 ? A GLU 171 OE1 16 1 Y 0 A GLU 224 ? OE2 ? A GLU 171 OE2 17 1 Y 0 A LYS 275 ? CG ? A LYS 222 CG 18 1 Y 0 A LYS 275 ? CD ? A LYS 222 CD 19 1 Y 0 A LYS 275 ? CE ? A LYS 222 CE 20 1 Y 0 A LYS 275 ? NZ ? A LYS 222 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLU 222 ? A GLU 169 2 1 Y 1 A SER 223 ? A SER 170 3 1 Y 1 A GLN 276 ? A GLN 223 4 1 Y 1 A ALA 277 ? A ALA 224 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #