data_1HQJ # _entry.id 1HQJ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.391 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1HQJ pdb_00001hqj 10.2210/pdb1hqj/pdb RCSB RCSB012520 ? ? WWPDB D_1000012520 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2001-03-14 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-04 5 'Structure model' 1 4 2018-10-03 6 'Structure model' 1 5 2018-10-10 7 'Structure model' 1 6 2019-07-24 8 'Structure model' 2 0 2024-04-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Refinement description' 4 5 'Structure model' 'Data collection' 5 6 'Structure model' 'Data collection' 6 6 'Structure model' 'Source and taxonomy' 7 6 'Structure model' 'Structure summary' 8 7 'Structure model' 'Data collection' 9 7 'Structure model' 'Derived calculations' 10 7 'Structure model' 'Refinement description' 11 7 'Structure model' 'Structure summary' 12 8 'Structure model' Advisory 13 8 'Structure model' 'Atomic model' 14 8 'Structure model' 'Data collection' 15 8 'Structure model' 'Database references' 16 8 'Structure model' 'Derived calculations' 17 8 'Structure model' 'Non-polymer description' 18 8 'Structure model' 'Polymer sequence' 19 8 'Structure model' 'Source and taxonomy' 20 8 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' diffrn_source 3 6 'Structure model' entity 4 6 'Structure model' pdbx_entity_src_syn 5 6 'Structure model' struct_biol 6 7 'Structure model' entity 7 7 'Structure model' software 8 7 'Structure model' struct_conn 9 8 'Structure model' atom_site 10 8 'Structure model' atom_site_anisotrop 11 8 'Structure model' chem_comp 12 8 'Structure model' chem_comp_atom 13 8 'Structure model' chem_comp_bond 14 8 'Structure model' database_2 15 8 'Structure model' entity 16 8 'Structure model' entity_poly 17 8 'Structure model' entity_poly_seq 18 8 'Structure model' pdbx_entity_nonpoly 19 8 'Structure model' pdbx_entity_src_syn 20 8 'Structure model' pdbx_nonpoly_scheme 21 8 'Structure model' pdbx_poly_seq_scheme 22 8 'Structure model' pdbx_struct_assembly_gen 23 8 'Structure model' pdbx_struct_conn_angle 24 8 'Structure model' pdbx_validate_close_contact 25 8 'Structure model' struct_asym 26 8 'Structure model' struct_conf 27 8 'Structure model' struct_conn 28 8 'Structure model' struct_ref 29 8 'Structure model' struct_site 30 8 'Structure model' struct_site_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.name' 2 5 'Structure model' '_diffrn_source.pdbx_synchrotron_site' 3 6 'Structure model' '_entity.formula_weight' 4 6 'Structure model' '_pdbx_entity_src_syn.ncbi_taxonomy_id' 5 6 'Structure model' '_pdbx_entity_src_syn.organism_scientific' 6 7 'Structure model' '_entity.formula_weight' 7 7 'Structure model' '_software.name' 8 7 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 9 8 'Structure model' '_atom_site.B_iso_or_equiv' 10 8 'Structure model' '_atom_site.Cartn_x' 11 8 'Structure model' '_atom_site.Cartn_y' 12 8 'Structure model' '_atom_site.Cartn_z' 13 8 'Structure model' '_atom_site.auth_asym_id' 14 8 'Structure model' '_atom_site.auth_atom_id' 15 8 'Structure model' '_atom_site.auth_comp_id' 16 8 'Structure model' '_atom_site.auth_seq_id' 17 8 'Structure model' '_atom_site.group_PDB' 18 8 'Structure model' '_atom_site.label_alt_id' 19 8 'Structure model' '_atom_site.label_asym_id' 20 8 'Structure model' '_atom_site.label_atom_id' 21 8 'Structure model' '_atom_site.label_comp_id' 22 8 'Structure model' '_atom_site.label_entity_id' 23 8 'Structure model' '_atom_site.label_seq_id' 24 8 'Structure model' '_atom_site.occupancy' 25 8 'Structure model' '_atom_site.type_symbol' 26 8 'Structure model' '_atom_site_anisotrop.U[1][1]' 27 8 'Structure model' '_atom_site_anisotrop.U[1][2]' 28 8 'Structure model' '_atom_site_anisotrop.U[1][3]' 29 8 'Structure model' '_atom_site_anisotrop.U[2][2]' 30 8 'Structure model' '_atom_site_anisotrop.U[2][3]' 31 8 'Structure model' '_atom_site_anisotrop.U[3][3]' 32 8 'Structure model' '_atom_site_anisotrop.pdbx_auth_asym_id' 33 8 'Structure model' '_atom_site_anisotrop.pdbx_auth_atom_id' 34 8 'Structure model' '_atom_site_anisotrop.pdbx_auth_comp_id' 35 8 'Structure model' '_atom_site_anisotrop.pdbx_auth_seq_id' 36 8 'Structure model' '_atom_site_anisotrop.pdbx_label_alt_id' 37 8 'Structure model' '_atom_site_anisotrop.pdbx_label_asym_id' 38 8 'Structure model' '_atom_site_anisotrop.pdbx_label_atom_id' 39 8 'Structure model' '_atom_site_anisotrop.pdbx_label_comp_id' 40 8 'Structure model' '_atom_site_anisotrop.pdbx_label_seq_id' 41 8 'Structure model' '_atom_site_anisotrop.type_symbol' 42 8 'Structure model' '_chem_comp.formula' 43 8 'Structure model' '_chem_comp.formula_weight' 44 8 'Structure model' '_chem_comp.id' 45 8 'Structure model' '_chem_comp.mon_nstd_flag' 46 8 'Structure model' '_chem_comp.name' 47 8 'Structure model' '_chem_comp.pdbx_synonyms' 48 8 'Structure model' '_chem_comp.type' 49 8 'Structure model' '_database_2.pdbx_DOI' 50 8 'Structure model' '_database_2.pdbx_database_accession' 51 8 'Structure model' '_entity_poly.nstd_monomer' 52 8 'Structure model' '_entity_poly.pdbx_seq_one_letter_code' 53 8 'Structure model' '_entity_poly_seq.mon_id' 54 8 'Structure model' '_pdbx_entity_src_syn.pdbx_beg_seq_num' 55 8 'Structure model' '_pdbx_entity_src_syn.pdbx_end_seq_num' 56 8 'Structure model' '_pdbx_poly_seq_scheme.auth_mon_id' 57 8 'Structure model' '_pdbx_poly_seq_scheme.auth_seq_num' 58 8 'Structure model' '_pdbx_poly_seq_scheme.mon_id' 59 8 'Structure model' '_pdbx_poly_seq_scheme.pdb_mon_id' 60 8 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 61 8 'Structure model' '_struct_ref.pdbx_align_begin' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1HQJ _pdbx_database_status.recvd_initial_deposition_date 2000-12-18 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1D7M ;The Coiled-Coil Trigger Site of the Rod Domain of Cortexillin I ; unspecified PDB 1GCM ;Control Protein Gcn4, Amino Acid Biosynthesis Regulatory Protein; Engineered: Yes; Mutation: L5I, V9I, L12I, N16I, L19I, V23I, L26I, V30I (I At Heptad A Positions, I At Heptad D Positions) ; unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Burkhard, P.' 1 'Meier, M.' 2 'Lustig, A.' 3 # _citation.id primary _citation.title 'Design of a minimal protein oligomerization domain by a structural approach.' _citation.journal_abbrev 'Protein Sci.' _citation.journal_volume 9 _citation.page_first 2294 _citation.page_last 2301 _citation.year 2000 _citation.journal_id_ASTM PRCIEI _citation.country US _citation.journal_id_ISSN 0961-8368 _citation.journal_id_CSD 0795 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 11206050 _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Burkhard, P.' 1 ? primary 'Meier, M.' 2 ? primary 'Lustig, A.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ZJU-GLU-LEU-GLU-ALA-ARG-ILE-ARG-GLU-LEU-GLU-ALA-ARG-ILE-LYS-NH2 2031.294 12 ? ? ? ? 2 non-polymer syn 'LEAD (II) ION' 207.200 9 ? ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 4 ? ? ? ? 4 water nat water 18.015 147 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(ZJU)ELERRIRELEARIK' _entity_poly.pdbx_seq_one_letter_code_can DELERRIRELEARIK _entity_poly.pdbx_strand_id A,B,C,D,E,F,G,H,I,J,K,L _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'LEAD (II) ION' PB 3 'SULFATE ION' SO4 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ZJU n 1 2 GLU n 1 3 LEU n 1 4 GLU n 1 5 ARG n 1 6 ARG n 1 7 ILE n 1 8 ARG n 1 9 GLU n 1 10 LEU n 1 11 GLU n 1 12 ALA n 1 13 ARG n 1 14 ILE n 1 15 LYS n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 15 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details Neosystem # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PB non-polymer . 'LEAD (II) ION' ? 'Pb 2' 207.200 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 ZJU 'L-peptide linking' n 'N-SUCCINYL-ASPARTIC ACID' '2-[(4-oxidanyl-4-oxidanylidene-butanoyl)amino]butanedioic acid' 'C8 H11 N O7' 233.175 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ZJU 1 2 1 ZJU SIN A . n A 1 2 GLU 2 3 3 GLU GLU A . n A 1 3 LEU 3 4 4 LEU LEU A . n A 1 4 GLU 4 5 5 GLU GLU A . n A 1 5 ARG 5 6 6 ARG ALA A . n A 1 6 ARG 6 7 7 ARG ARG A . n A 1 7 ILE 7 8 8 ILE ILE A . n A 1 8 ARG 8 9 9 ARG ARG A . n A 1 9 GLU 9 10 10 GLU GLU A . n A 1 10 LEU 10 11 11 LEU LEU A . n A 1 11 GLU 11 12 12 GLU GLU A . n A 1 12 ALA 12 13 13 ALA ALA A . n A 1 13 ARG 13 14 14 ARG ARG A . n A 1 14 ILE 14 15 15 ILE ILE A . n A 1 15 LYS 15 16 16 LYS LYS A . n B 1 1 ZJU 1 2 1 ZJU SIN B . n B 1 2 GLU 2 3 3 GLU GLU B . n B 1 3 LEU 3 4 4 LEU LEU B . n B 1 4 GLU 4 5 5 GLU GLU B . n B 1 5 ARG 5 6 6 ARG SER B . n B 1 6 ARG 6 7 7 ARG ARG B . n B 1 7 ILE 7 8 8 ILE ILE B . n B 1 8 ARG 8 9 9 ARG ARG B . n B 1 9 GLU 9 10 10 GLU GLU B . n B 1 10 LEU 10 11 11 LEU LEU B . n B 1 11 GLU 11 12 12 GLU GLU B . n B 1 12 ALA 12 13 13 ALA ALA B . n B 1 13 ARG 13 14 14 ARG ARG B . n B 1 14 ILE 14 15 15 ILE ILE B . n B 1 15 LYS 15 16 16 LYS LYS B . n C 1 1 ZJU 1 2 1 ZJU SIN C . n C 1 2 GLU 2 3 3 GLU GLU C . n C 1 3 LEU 3 4 4 LEU LEU C . n C 1 4 GLU 4 5 5 GLU GLU C . n C 1 5 ARG 5 6 6 ARG ARG C . n C 1 6 ARG 6 7 7 ARG ARG C . n C 1 7 ILE 7 8 8 ILE ILE C . n C 1 8 ARG 8 9 9 ARG ARG C . n C 1 9 GLU 9 10 10 GLU GLU C . n C 1 10 LEU 10 11 11 LEU LEU C . n C 1 11 GLU 11 12 12 GLU GLU C . n C 1 12 ALA 12 13 13 ALA ALA C . n C 1 13 ARG 13 14 14 ARG ARG C . n C 1 14 ILE 14 15 15 ILE ILE C . n C 1 15 LYS 15 16 16 LYS LYS C . n D 1 1 ZJU 1 2 1 ZJU SIN D . n D 1 2 GLU 2 3 3 GLU GLU D . n D 1 3 LEU 3 4 4 LEU LEU D . n D 1 4 GLU 4 5 5 GLU GLU D . n D 1 5 ARG 5 6 6 ARG ALA D . n D 1 6 ARG 6 7 7 ARG ARG D . n D 1 7 ILE 7 8 8 ILE ILE D . n D 1 8 ARG 8 9 9 ARG ARG D . n D 1 9 GLU 9 10 10 GLU GLU D . n D 1 10 LEU 10 11 11 LEU LEU D . n D 1 11 GLU 11 12 12 GLU GLU D . n D 1 12 ALA 12 13 13 ALA ALA D . n D 1 13 ARG 13 14 14 ARG ARG D . n D 1 14 ILE 14 15 15 ILE ILE D . n D 1 15 LYS 15 16 16 LYS LYS D . n E 1 1 ZJU 1 2 1 ZJU SIN E . n E 1 2 GLU 2 3 3 GLU GLU E . n E 1 3 LEU 3 4 4 LEU LEU E . n E 1 4 GLU 4 5 5 GLU GLU E . n E 1 5 ARG 5 6 6 ARG ARG E . n E 1 6 ARG 6 7 7 ARG ARG E . n E 1 7 ILE 7 8 8 ILE ILE E . n E 1 8 ARG 8 9 9 ARG ARG E . n E 1 9 GLU 9 10 10 GLU GLU E . n E 1 10 LEU 10 11 11 LEU LEU E . n E 1 11 GLU 11 12 12 GLU GLU E . n E 1 12 ALA 12 13 13 ALA ALA E . n E 1 13 ARG 13 14 14 ARG ARG E . n E 1 14 ILE 14 15 15 ILE ILE E . n E 1 15 LYS 15 16 16 LYS LYS E . n F 1 1 ZJU 1 2 1 ZJU SIN F . n F 1 2 GLU 2 3 3 GLU GLU F . n F 1 3 LEU 3 4 4 LEU LEU F . n F 1 4 GLU 4 5 5 GLU GLU F . n F 1 5 ARG 5 6 6 ARG ALA F . n F 1 6 ARG 6 7 7 ARG ARG F . n F 1 7 ILE 7 8 8 ILE ILE F . n F 1 8 ARG 8 9 9 ARG ARG F . n F 1 9 GLU 9 10 10 GLU GLU F . n F 1 10 LEU 10 11 11 LEU LEU F . n F 1 11 GLU 11 12 12 GLU GLU F . n F 1 12 ALA 12 13 13 ALA ALA F . n F 1 13 ARG 13 14 14 ARG ARG F . n F 1 14 ILE 14 15 15 ILE ILE F . n F 1 15 LYS 15 16 16 LYS LYS F . n G 1 1 ZJU 1 2 1 ZJU SIN G . n G 1 2 GLU 2 3 3 GLU GLU G . n G 1 3 LEU 3 4 4 LEU LEU G . n G 1 4 GLU 4 5 5 GLU GLU G . n G 1 5 ARG 5 6 6 ARG ALA G . n G 1 6 ARG 6 7 7 ARG ARG G . n G 1 7 ILE 7 8 8 ILE ILE G . n G 1 8 ARG 8 9 9 ARG ARG G . n G 1 9 GLU 9 10 10 GLU GLU G . n G 1 10 LEU 10 11 11 LEU LEU G . n G 1 11 GLU 11 12 12 GLU GLU G . n G 1 12 ALA 12 13 13 ALA ALA G . n G 1 13 ARG 13 14 14 ARG ARG G . n G 1 14 ILE 14 15 15 ILE ILE G . n G 1 15 LYS 15 16 16 LYS LYS G . n H 1 1 ZJU 1 2 1 ZJU SIN H . n H 1 2 GLU 2 3 3 GLU GLU H . n H 1 3 LEU 3 4 4 LEU LEU H . n H 1 4 GLU 4 5 5 GLU GLU H . n H 1 5 ARG 5 6 6 ARG ALA H . n H 1 6 ARG 6 7 7 ARG ARG H . n H 1 7 ILE 7 8 8 ILE ILE H . n H 1 8 ARG 8 9 9 ARG ARG H . n H 1 9 GLU 9 10 10 GLU GLU H . n H 1 10 LEU 10 11 11 LEU LEU H . n H 1 11 GLU 11 12 12 GLU GLU H . n H 1 12 ALA 12 13 13 ALA ALA H . n H 1 13 ARG 13 14 14 ARG ARG H . n H 1 14 ILE 14 15 15 ILE ILE H . n H 1 15 LYS 15 16 16 LYS LYS H . n I 1 1 ZJU 1 2 1 ZJU SIN I . n I 1 2 GLU 2 3 3 GLU GLU I . n I 1 3 LEU 3 4 4 LEU LEU I . n I 1 4 GLU 4 5 5 GLU GLU I . n I 1 5 ARG 5 6 6 ARG ALA I . n I 1 6 ARG 6 7 7 ARG ARG I . n I 1 7 ILE 7 8 8 ILE ILE I . n I 1 8 ARG 8 9 9 ARG ARG I . n I 1 9 GLU 9 10 10 GLU GLU I . n I 1 10 LEU 10 11 11 LEU LEU I . n I 1 11 GLU 11 12 12 GLU GLU I . n I 1 12 ALA 12 13 13 ALA ALA I . n I 1 13 ARG 13 14 14 ARG ARG I . n I 1 14 ILE 14 15 15 ILE ILE I . n I 1 15 LYS 15 16 16 LYS LYS I . n J 1 1 ZJU 1 2 1 ZJU SIN J . n J 1 2 GLU 2 3 3 GLU GLU J . n J 1 3 LEU 3 4 4 LEU LEU J . n J 1 4 GLU 4 5 5 GLU GLU J . n J 1 5 ARG 5 6 6 ARG ALA J . n J 1 6 ARG 6 7 7 ARG ARG J . n J 1 7 ILE 7 8 8 ILE ILE J . n J 1 8 ARG 8 9 9 ARG ARG J . n J 1 9 GLU 9 10 10 GLU GLU J . n J 1 10 LEU 10 11 11 LEU LEU J . n J 1 11 GLU 11 12 12 GLU GLU J . n J 1 12 ALA 12 13 13 ALA ALA J . n J 1 13 ARG 13 14 14 ARG ARG J . n J 1 14 ILE 14 15 15 ILE ILE J . n J 1 15 LYS 15 16 16 LYS LYS J . n K 1 1 ZJU 1 2 1 ZJU SIN K . n K 1 2 GLU 2 3 3 GLU GLU K . n K 1 3 LEU 3 4 4 LEU LEU K . n K 1 4 GLU 4 5 5 GLU GLU K . n K 1 5 ARG 5 6 6 ARG ALA K . n K 1 6 ARG 6 7 7 ARG ARG K . n K 1 7 ILE 7 8 8 ILE ILE K . n K 1 8 ARG 8 9 9 ARG ARG K . n K 1 9 GLU 9 10 10 GLU GLU K . n K 1 10 LEU 10 11 11 LEU LEU K . n K 1 11 GLU 11 12 12 GLU GLU K . n K 1 12 ALA 12 13 13 ALA ALA K . n K 1 13 ARG 13 14 14 ARG ARG K . n K 1 14 ILE 14 15 15 ILE ILE K . n K 1 15 LYS 15 16 16 LYS LYS K . n L 1 1 ZJU 1 2 1 ZJU SIN L . n L 1 2 GLU 2 3 3 GLU GLU L . n L 1 3 LEU 3 4 4 LEU LEU L . n L 1 4 GLU 4 5 5 GLU GLU L . n L 1 5 ARG 5 6 6 ARG SER L . n L 1 6 ARG 6 7 7 ARG ARG L . n L 1 7 ILE 7 8 8 ILE ILE L . n L 1 8 ARG 8 9 9 ARG ARG L . n L 1 9 GLU 9 10 10 GLU GLU L . n L 1 10 LEU 10 11 11 LEU LEU L . n L 1 11 GLU 11 12 12 GLU GLU L . n L 1 12 ALA 12 13 13 ALA ALA L . n L 1 13 ARG 13 14 14 ARG ARG L . n L 1 14 ILE 14 15 15 ILE ILE L . n L 1 15 LYS 15 16 16 LYS LYS L . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code M 2 PB 1 2003 3 PB PB A . N 3 SO4 1 1001 1 SO4 SO4 B . O 3 SO4 1 1004 4 SO4 SO4 C . P 2 PB 1 2002 2 PB PB D . Q 2 PB 1 2007 7 PB PB E . R 3 SO4 1 1002 2 SO4 SO4 F . S 2 PB 1 2004 4 PB PB F . T 2 PB 1 2001 1 PB PB G . U 2 PB 1 2008 8 PB PB H . V 3 SO4 1 1003 3 SO4 SO4 I . W 2 PB 1 2006 6 PB PB I . X 2 PB 1 2005 5 PB PB K . Y 2 PB 1 2009 9 PB PB L . Z 4 HOH 1 2004 2 HOH HOH A . Z 4 HOH 2 2005 17 HOH HOH A . Z 4 HOH 3 2006 26 HOH HOH A . Z 4 HOH 4 2007 33 HOH HOH A . Z 4 HOH 5 2008 46 HOH HOH A . Z 4 HOH 6 2009 47 HOH HOH A . Z 4 HOH 7 2010 53 HOH HOH A . Z 4 HOH 8 2011 56 HOH HOH A . Z 4 HOH 9 2012 76 HOH HOH A . Z 4 HOH 10 2013 90 HOH HOH A . Z 4 HOH 11 2014 96 HOH HOH A . Z 4 HOH 12 2015 106 HOH HOH A . Z 4 HOH 13 2016 114 HOH HOH A . Z 4 HOH 14 2017 120 HOH HOH A . Z 4 HOH 15 2018 126 HOH HOH A . Z 4 HOH 16 2019 141 HOH HOH A . AA 4 HOH 1 1002 1 HOH HOH B . AA 4 HOH 2 1003 22 HOH HOH B . AA 4 HOH 3 1004 40 HOH HOH B . AA 4 HOH 4 1005 42 HOH HOH B . AA 4 HOH 5 1006 49 HOH HOH B . AA 4 HOH 6 1007 87 HOH HOH B . AA 4 HOH 7 1008 109 HOH HOH B . AA 4 HOH 8 1009 122 HOH HOH B . AA 4 HOH 9 1010 131 HOH HOH B . AA 4 HOH 10 1011 140 HOH HOH B . AA 4 HOH 11 1012 142 HOH HOH B . BA 4 HOH 1 1005 3 HOH HOH C . BA 4 HOH 2 1006 13 HOH HOH C . BA 4 HOH 3 1007 31 HOH HOH C . BA 4 HOH 4 1008 51 HOH HOH C . BA 4 HOH 5 1009 54 HOH HOH C . BA 4 HOH 6 1010 64 HOH HOH C . BA 4 HOH 7 1011 84 HOH HOH C . BA 4 HOH 8 1012 86 HOH HOH C . BA 4 HOH 9 1013 91 HOH HOH C . BA 4 HOH 10 1014 102 HOH HOH C . BA 4 HOH 11 1015 113 HOH HOH C . BA 4 HOH 12 1016 119 HOH HOH C . BA 4 HOH 13 1017 137 HOH HOH C . CA 4 HOH 1 2003 8 HOH HOH D . CA 4 HOH 2 2004 36 HOH HOH D . CA 4 HOH 3 2005 58 HOH HOH D . CA 4 HOH 4 2006 61 HOH HOH D . CA 4 HOH 5 2007 75 HOH HOH D . CA 4 HOH 6 2008 94 HOH HOH D . CA 4 HOH 7 2009 125 HOH HOH D . CA 4 HOH 8 2010 135 HOH HOH D . DA 4 HOH 1 2008 6 HOH HOH E . DA 4 HOH 2 2009 9 HOH HOH E . DA 4 HOH 3 2010 14 HOH HOH E . DA 4 HOH 4 2011 34 HOH HOH E . DA 4 HOH 5 2012 55 HOH HOH E . DA 4 HOH 6 2013 63 HOH HOH E . DA 4 HOH 7 2014 68 HOH HOH E . DA 4 HOH 8 2015 72 HOH HOH E . DA 4 HOH 9 2016 112 HOH HOH E . DA 4 HOH 10 2017 121 HOH HOH E . DA 4 HOH 11 2018 123 HOH HOH E . DA 4 HOH 12 2019 127 HOH HOH E . DA 4 HOH 13 2020 128 HOH HOH E . DA 4 HOH 14 2021 145 HOH HOH E . EA 4 HOH 1 2005 11 HOH HOH F . EA 4 HOH 2 2006 20 HOH HOH F . EA 4 HOH 3 2007 48 HOH HOH F . EA 4 HOH 4 2008 85 HOH HOH F . EA 4 HOH 5 2009 88 HOH HOH F . EA 4 HOH 6 2010 101 HOH HOH F . EA 4 HOH 7 2011 105 HOH HOH F . EA 4 HOH 8 2012 132 HOH HOH F . EA 4 HOH 9 2013 138 HOH HOH F . EA 4 HOH 10 2014 139 HOH HOH F . FA 4 HOH 1 2002 4 HOH HOH G . FA 4 HOH 2 2003 27 HOH HOH G . FA 4 HOH 3 2004 28 HOH HOH G . FA 4 HOH 4 2005 35 HOH HOH G . FA 4 HOH 5 2006 39 HOH HOH G . FA 4 HOH 6 2007 65 HOH HOH G . FA 4 HOH 7 2008 66 HOH HOH G . FA 4 HOH 8 2009 77 HOH HOH G . FA 4 HOH 9 2010 78 HOH HOH G . FA 4 HOH 10 2011 82 HOH HOH G . FA 4 HOH 11 2012 83 HOH HOH G . FA 4 HOH 12 2013 89 HOH HOH G . FA 4 HOH 13 2014 115 HOH HOH G . FA 4 HOH 14 2015 124 HOH HOH G . FA 4 HOH 15 2016 136 HOH HOH G . GA 4 HOH 1 2009 12 HOH HOH H . GA 4 HOH 2 2010 38 HOH HOH H . GA 4 HOH 3 2011 43 HOH HOH H . GA 4 HOH 4 2012 67 HOH HOH H . GA 4 HOH 5 2013 73 HOH HOH H . GA 4 HOH 6 2014 74 HOH HOH H . GA 4 HOH 7 2015 79 HOH HOH H . GA 4 HOH 8 2016 99 HOH HOH H . GA 4 HOH 9 2017 100 HOH HOH H . GA 4 HOH 10 2018 103 HOH HOH H . GA 4 HOH 11 2019 104 HOH HOH H . GA 4 HOH 12 2020 108 HOH HOH H . GA 4 HOH 13 2021 111 HOH HOH H . GA 4 HOH 14 2022 146 HOH HOH H . HA 4 HOH 1 2007 5 HOH HOH I . HA 4 HOH 2 2008 29 HOH HOH I . HA 4 HOH 3 2009 32 HOH HOH I . HA 4 HOH 4 2010 41 HOH HOH I . HA 4 HOH 5 2011 45 HOH HOH I . HA 4 HOH 6 2012 52 HOH HOH I . HA 4 HOH 7 2013 59 HOH HOH I . HA 4 HOH 8 2014 93 HOH HOH I . HA 4 HOH 9 2015 130 HOH HOH I . HA 4 HOH 10 2016 133 HOH HOH I . IA 4 HOH 1 17 16 HOH HOH J . IA 4 HOH 2 18 21 HOH HOH J . IA 4 HOH 3 19 30 HOH HOH J . IA 4 HOH 4 20 44 HOH HOH J . IA 4 HOH 5 21 50 HOH HOH J . IA 4 HOH 6 22 62 HOH HOH J . IA 4 HOH 7 23 70 HOH HOH J . IA 4 HOH 8 24 98 HOH HOH J . IA 4 HOH 9 25 107 HOH HOH J . IA 4 HOH 10 26 134 HOH HOH J . IA 4 HOH 11 27 147 HOH HOH J . JA 4 HOH 1 2006 7 HOH HOH K . JA 4 HOH 2 2007 19 HOH HOH K . JA 4 HOH 3 2008 25 HOH HOH K . JA 4 HOH 4 2009 57 HOH HOH K . JA 4 HOH 5 2010 60 HOH HOH K . JA 4 HOH 6 2011 71 HOH HOH K . JA 4 HOH 7 2012 80 HOH HOH K . JA 4 HOH 8 2013 95 HOH HOH K . JA 4 HOH 9 2014 97 HOH HOH K . JA 4 HOH 10 2015 116 HOH HOH K . JA 4 HOH 11 2016 117 HOH HOH K . JA 4 HOH 12 2017 129 HOH HOH K . JA 4 HOH 13 2018 144 HOH HOH K . KA 4 HOH 1 2010 10 HOH HOH L . KA 4 HOH 2 2011 15 HOH HOH L . KA 4 HOH 3 2012 18 HOH HOH L . KA 4 HOH 4 2013 23 HOH HOH L . KA 4 HOH 5 2014 24 HOH HOH L . KA 4 HOH 6 2015 37 HOH HOH L . KA 4 HOH 7 2016 69 HOH HOH L . KA 4 HOH 8 2017 81 HOH HOH L . KA 4 HOH 9 2018 92 HOH HOH L . KA 4 HOH 10 2019 110 HOH HOH L . KA 4 HOH 11 2020 118 HOH HOH L . KA 4 HOH 12 2021 143 HOH HOH L . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 6 ? CG ? A ARG 5 CG 2 1 Y 1 A ARG 6 ? CD ? A ARG 5 CD 3 1 Y 1 A ARG 6 ? NE ? A ARG 5 NE 4 1 Y 1 A ARG 6 ? CZ ? A ARG 5 CZ 5 1 Y 1 A ARG 6 ? NH1 ? A ARG 5 NH1 6 1 Y 1 A ARG 6 ? NH2 ? A ARG 5 NH2 7 1 Y 1 B ARG 6 ? CD ? B ARG 5 CD 8 1 Y 1 B ARG 6 ? NE ? B ARG 5 NE 9 1 Y 1 B ARG 6 ? CZ ? B ARG 5 CZ 10 1 Y 1 B ARG 6 ? NH1 ? B ARG 5 NH1 11 1 Y 1 B ARG 6 ? NH2 ? B ARG 5 NH2 12 1 Y 1 D ARG 6 ? CG ? D ARG 5 CG 13 1 Y 1 D ARG 6 ? CD ? D ARG 5 CD 14 1 Y 1 D ARG 6 ? NE ? D ARG 5 NE 15 1 Y 1 D ARG 6 ? CZ ? D ARG 5 CZ 16 1 Y 1 D ARG 6 ? NH1 ? D ARG 5 NH1 17 1 Y 1 D ARG 6 ? NH2 ? D ARG 5 NH2 18 1 Y 1 F ARG 6 ? CG ? F ARG 5 CG 19 1 Y 1 F ARG 6 ? CD ? F ARG 5 CD 20 1 Y 1 F ARG 6 ? NE ? F ARG 5 NE 21 1 Y 1 F ARG 6 ? CZ ? F ARG 5 CZ 22 1 Y 1 F ARG 6 ? NH1 ? F ARG 5 NH1 23 1 Y 1 F ARG 6 ? NH2 ? F ARG 5 NH2 24 1 Y 1 G ARG 6 ? CG ? G ARG 5 CG 25 1 Y 1 G ARG 6 ? CD ? G ARG 5 CD 26 1 Y 1 G ARG 6 ? NE ? G ARG 5 NE 27 1 Y 1 G ARG 6 ? CZ ? G ARG 5 CZ 28 1 Y 1 G ARG 6 ? NH1 ? G ARG 5 NH1 29 1 Y 1 G ARG 6 ? NH2 ? G ARG 5 NH2 30 1 Y 1 H ARG 6 ? CG ? H ARG 5 CG 31 1 Y 1 H ARG 6 ? CD ? H ARG 5 CD 32 1 Y 1 H ARG 6 ? NE ? H ARG 5 NE 33 1 Y 1 H ARG 6 ? CZ ? H ARG 5 CZ 34 1 Y 1 H ARG 6 ? NH1 ? H ARG 5 NH1 35 1 Y 1 H ARG 6 ? NH2 ? H ARG 5 NH2 36 1 Y 1 I ARG 6 ? CG ? I ARG 5 CG 37 1 Y 1 I ARG 6 ? CD ? I ARG 5 CD 38 1 Y 1 I ARG 6 ? NE ? I ARG 5 NE 39 1 Y 1 I ARG 6 ? CZ ? I ARG 5 CZ 40 1 Y 1 I ARG 6 ? NH1 ? I ARG 5 NH1 41 1 Y 1 I ARG 6 ? NH2 ? I ARG 5 NH2 42 1 Y 1 J ARG 6 ? CG ? J ARG 5 CG 43 1 Y 1 J ARG 6 ? CD ? J ARG 5 CD 44 1 Y 1 J ARG 6 ? NE ? J ARG 5 NE 45 1 Y 1 J ARG 6 ? CZ ? J ARG 5 CZ 46 1 Y 1 J ARG 6 ? NH1 ? J ARG 5 NH1 47 1 Y 1 J ARG 6 ? NH2 ? J ARG 5 NH2 48 1 Y 1 K ARG 6 ? CG ? K ARG 5 CG 49 1 Y 1 K ARG 6 ? CD ? K ARG 5 CD 50 1 Y 1 K ARG 6 ? NE ? K ARG 5 NE 51 1 Y 1 K ARG 6 ? CZ ? K ARG 5 CZ 52 1 Y 1 K ARG 6 ? NH1 ? K ARG 5 NH1 53 1 Y 1 K ARG 6 ? NH2 ? K ARG 5 NH2 54 1 Y 1 L ARG 6 ? CD ? L ARG 5 CD 55 1 Y 1 L ARG 6 ? NE ? L ARG 5 NE 56 1 Y 1 L ARG 6 ? CZ ? L ARG 5 CZ 57 1 Y 1 L ARG 6 ? NH1 ? L ARG 5 NH1 58 1 Y 1 L ARG 6 ? NH2 ? L ARG 5 NH2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SHELXL refinement . ? 1 CNS refinement . ? 2 DENZO 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 CNS phasing . ? 5 # _cell.entry_id 1HQJ _cell.length_a 44.334 _cell.length_b 44.874 _cell.length_c 81.043 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1HQJ _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # _exptl.entry_id 1HQJ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.74 _exptl_crystal.density_percent_sol 29.28 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.6 _exptl_crystal_grow.pdbx_details 'Ammonium Sulfate, Sodium Acetate, pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 1999-11-05 _diffrn_detector.details WIGGLER # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.951 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'EMBL/DESY, HAMBURG BEAMLINE X11' _diffrn_source.pdbx_synchrotron_site 'EMBL/DESY, HAMBURG' _diffrn_source.pdbx_synchrotron_beamline X11 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.951 # _reflns.entry_id 1HQJ _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30 _reflns.d_resolution_high 1.2 _reflns.number_obs ? _reflns.number_all 42926 _reflns.percent_possible_obs 81.2 _reflns.pdbx_Rmerge_I_obs 0.5800000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 12.8 _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 1HQJ _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all 4131 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_d_res_low 10.00 _refine.ls_d_res_high 1.20 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all 0.1700000 _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free 0.2230000 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters 1680 _refine.ls_number_restraints 2133 _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'ENGH AND HUBER' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1HQJ _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues 1 _refine_analyze.occupancy_sum_hydrogen 1384. _refine_analyze.occupancy_sum_non_hydrogen 1815. _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1610 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 113 _refine_hist.number_atoms_solvent 147 _refine_hist.number_atoms_total 1870 _refine_hist.d_res_high 1.20 _refine_hist.d_res_low 10.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function s_bond_d 0.004 ? ? ? 'X-RAY DIFFRACTION' ? s_angle_d 0.900 ? ? ? 'X-RAY DIFFRACTION' ? # _pdbx_refine.entry_id 1HQJ _pdbx_refine.R_factor_all_no_cutoff 0.1700000 _pdbx_refine.R_factor_obs_no_cutoff ? _pdbx_refine.free_R_factor_no_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff ? _pdbx_refine.free_R_val_test_set_ct_no_cutoff ? _pdbx_refine.R_factor_all_4sig_cutoff 0.1660000 _pdbx_refine.R_factor_obs_4sig_cutoff ? _pdbx_refine.free_R_factor_4sig_cutoff 0.2180000 _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff 5.0 _pdbx_refine.number_reflns_obs_4sig_cutoff 3493 _pdbx_refine.number_reflns_obs_no_cutoff ? _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.free_R_error_no_cutoff ? # _database_PDB_matrix.entry_id 1HQJ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.000000 _database_PDB_matrix.origx_vector[2] 0.000000 _database_PDB_matrix.origx_vector[3] 0.000000 # _struct.entry_id 1HQJ _struct.title 'CRYSTAL STRUCTURE OF A DE NOVO DESIGNED TRIMERIC COILED-COIL PEPTIDE' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1HQJ _struct_keywords.pdbx_keywords 'DE NOVO PROTEIN' _struct_keywords.text 'coiled coil, de novo design, alpha-helix, trimer, DE NOVO PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 1 ? F N N 1 ? G N N 1 ? H N N 1 ? I N N 1 ? J N N 1 ? K N N 1 ? L N N 1 ? M N N 2 ? N N N 3 ? O N N 3 ? P N N 2 ? Q N N 2 ? R N N 3 ? S N N 2 ? T N N 2 ? U N N 2 ? V N N 3 ? W N N 2 ? X N N 2 ? Y N N 2 ? Z N N 4 ? AA N N 4 ? BA N N 4 ? CA N N 4 ? DA N N 4 ? EA N N 4 ? FA N N 4 ? GA N N 4 ? HA N N 4 ? IA N N 4 ? JA N N 4 ? KA N N 4 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 1HQJ _struct_ref.pdbx_db_accession 1HQJ _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1HQJ A 1 ? 15 ? 1HQJ 2 ? 16 ? 2 16 2 1 1HQJ B 1 ? 15 ? 1HQJ 2 ? 16 ? 2 16 3 1 1HQJ C 1 ? 15 ? 1HQJ 2 ? 16 ? 2 16 4 1 1HQJ D 1 ? 15 ? 1HQJ 2 ? 16 ? 2 16 5 1 1HQJ E 1 ? 15 ? 1HQJ 2 ? 16 ? 2 16 6 1 1HQJ F 1 ? 15 ? 1HQJ 2 ? 16 ? 2 16 7 1 1HQJ G 1 ? 15 ? 1HQJ 2 ? 16 ? 2 16 8 1 1HQJ H 1 ? 15 ? 1HQJ 2 ? 16 ? 2 16 9 1 1HQJ I 1 ? 15 ? 1HQJ 2 ? 16 ? 2 16 10 1 1HQJ J 1 ? 15 ? 1HQJ 2 ? 16 ? 2 16 11 1 1HQJ K 1 ? 15 ? 1HQJ 2 ? 16 ? 2 16 12 1 1HQJ L 1 ? 15 ? 1HQJ 2 ? 16 ? 2 16 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA trimeric 3 2 author_and_software_defined_assembly PISA trimeric 3 3 author_and_software_defined_assembly PISA trimeric 3 4 author_and_software_defined_assembly PISA trimeric 3 5 software_defined_assembly PISA dodecameric 12 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2880 ? 1 MORE -14 ? 1 'SSA (A^2)' 3670 ? 2 'ABSA (A^2)' 2770 ? 2 MORE -14 ? 2 'SSA (A^2)' 3760 ? 3 'ABSA (A^2)' 2950 ? 3 MORE -16 ? 3 'SSA (A^2)' 3930 ? 4 'ABSA (A^2)' 2850 ? 4 MORE -15 ? 4 'SSA (A^2)' 3760 ? 5 'ABSA (A^2)' 15210 ? 5 MORE -89 ? 5 'SSA (A^2)' 11360 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,M,N,O,Z,AA,BA 2 1 D,E,F,P,Q,R,S,CA,DA,EA 3 1 G,H,I,T,U,V,W,FA,GA,HA 4 1 J,K,L,X,Y,IA,JA,KA 5 1 G,H,I,J,K,L,T,U,V,W,X,Y,FA,GA,HA,IA,JA,KA 5 2 A,B,C,D,E,F,M,N,O,P,Q,R,S,Z,AA,BA,CA,DA,EA # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 1_455 x-1,y,z 1.0000000000 0.0000000000 0.0000000000 -44.3340000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # _struct_biol.id 1 _struct_biol.details 'The peptide is a trimer at high ionic strength' _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ZJU 1 C ? ? ? 1_555 A GLU 2 N ? ? A ZJU 2 A GLU 3 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale2 covale both ? B ZJU 1 C ? ? ? 1_555 B GLU 2 N ? ? B ZJU 2 B GLU 3 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale3 covale both ? C ZJU 1 C ? ? ? 1_555 C GLU 2 N ? ? C ZJU 2 C GLU 3 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale4 covale both ? D ZJU 1 C ? ? ? 1_555 D GLU 2 N ? ? D ZJU 2 D GLU 3 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale5 covale both ? E ZJU 1 C ? ? ? 1_555 E GLU 2 N ? ? E ZJU 2 E GLU 3 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale6 covale both ? F ZJU 1 C ? ? ? 1_555 F GLU 2 N ? ? F ZJU 2 F GLU 3 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale7 covale both ? G ZJU 1 C ? ? ? 1_555 G GLU 2 N ? ? G ZJU 2 G GLU 3 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale8 covale both ? H ZJU 1 C ? ? ? 1_555 H GLU 2 N ? ? H ZJU 2 H GLU 3 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale9 covale both ? I ZJU 1 C ? ? ? 1_555 I GLU 2 N ? ? I ZJU 2 I GLU 3 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale10 covale both ? J ZJU 1 C ? ? ? 1_555 J GLU 2 N ? ? J ZJU 2 J GLU 3 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale11 covale both ? K ZJU 1 C ? ? ? 1_555 K GLU 2 N ? ? K ZJU 2 K GLU 3 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale12 covale both ? L ZJU 1 C ? ? ? 1_555 L GLU 2 N ? ? L ZJU 2 L GLU 3 1_555 ? ? ? ? ? ? ? 1.331 ? ? metalc1 metalc ? ? A ZJU 1 O1 ? ? ? 1_555 X PB . PB ? ? A ZJU 2 K PB 2005 1_555 ? ? ? ? ? ? ? 2.645 ? ? metalc2 metalc ? ? A GLU 4 OE1 ? ? ? 1_555 Y PB . PB ? ? A GLU 5 L PB 2009 1_555 ? ? ? ? ? ? ? 3.230 ? ? metalc3 metalc ? ? A GLU 9 OE2 A ? ? 1_555 M PB . PB ? ? A GLU 10 A PB 2003 1_555 ? ? ? ? ? ? ? 2.713 ? ? metalc4 metalc ? ? M PB . PB ? ? ? 1_555 BA HOH . O ? ? A PB 2003 C HOH 1007 1_555 ? ? ? ? ? ? ? 2.993 ? ? metalc5 metalc ? ? M PB . PB ? ? ? 1_555 BA HOH . O ? ? A PB 2003 C HOH 1011 1_555 ? ? ? ? ? ? ? 2.343 ? ? metalc6 metalc ? ? Z HOH . O ? ? ? 1_555 X PB . PB ? ? A HOH 2008 K PB 2005 1_555 ? ? ? ? ? ? ? 2.497 ? ? metalc7 metalc ? ? D ZJU 1 O1 ? ? ? 1_555 P PB . PB ? ? D ZJU 2 D PB 2002 1_555 ? ? ? ? ? ? ? 2.151 ? ? metalc8 metalc ? ? E GLU 9 OE1 ? ? ? 1_555 Q PB . PB ? ? E GLU 10 E PB 2007 1_555 ? ? ? ? ? ? ? 2.249 ? ? metalc9 metalc ? ? E GLU 9 OE2 ? ? ? 1_555 Q PB . PB ? ? E GLU 10 E PB 2007 1_555 ? ? ? ? ? ? ? 2.276 ? ? metalc10 metalc ? ? Q PB . PB ? ? ? 1_555 DA HOH . O ? ? E PB 2007 E HOH 2019 1_555 ? ? ? ? ? ? ? 2.341 ? ? metalc11 metalc ? ? Q PB . PB ? ? ? 1_555 H ZJU 1 OD1 ? ? E PB 2007 H ZJU 2 1_555 ? ? ? ? ? ? ? 2.308 ? ? metalc12 metalc ? ? F ZJU 1 OD2 ? ? ? 1_555 S PB . PB ? ? F ZJU 2 F PB 2004 1_555 ? ? ? ? ? ? ? 2.931 ? ? metalc13 metalc ? ? F GLU 9 OE1 ? ? ? 1_555 U PB . PB ? ? F GLU 10 H PB 2008 4_555 ? ? ? ? ? ? ? 2.546 ? ? metalc14 metalc ? ? T PB . PB ? ? ? 1_555 FA HOH . O ? ? G PB 2001 G HOH 2008 1_555 ? ? ? ? ? ? ? 2.811 ? ? metalc15 metalc ? ? T PB . PB ? ? ? 1_565 K ZJU 1 O1 ? ? G PB 2001 K ZJU 2 1_555 ? ? ? ? ? ? ? 2.291 ? ? metalc16 metalc ? ? H ZJU 1 O1 ? ? ? 1_555 U PB . PB ? ? H ZJU 2 H PB 2008 1_555 ? ? ? ? ? ? ? 2.463 ? ? metalc17 metalc ? ? GA HOH . O ? ? ? 1_555 W PB . PB ? ? H HOH 2013 I PB 2006 1_555 ? ? ? ? ? ? ? 3.023 ? ? metalc18 metalc ? ? GA HOH . O ? ? ? 1_555 W PB . PB ? ? H HOH 2020 I PB 2006 1_555 ? ? ? ? ? ? ? 2.544 ? ? metalc19 metalc ? ? I GLU 9 OE1 B ? ? 1_555 W PB . PB ? ? I GLU 10 I PB 2006 1_555 ? ? ? ? ? ? ? 2.804 ? ? metalc20 metalc ? ? K LYS 15 NZ ? ? ? 1_555 X PB . PB ? ? K LYS 16 K PB 2005 1_555 ? ? ? ? ? ? ? 2.505 ? ? metalc21 metalc ? ? L GLU 2 OE2 ? ? ? 1_555 Y PB . PB ? ? L GLU 3 L PB 2009 1_555 ? ? ? ? ? ? ? 2.572 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O1 ? A ZJU 1 ? A ZJU 2 ? 1_555 PB ? X PB . ? K PB 2005 ? 1_555 O ? Z HOH . ? A HOH 2008 ? 1_555 63.6 ? 2 O1 ? A ZJU 1 ? A ZJU 2 ? 1_555 PB ? X PB . ? K PB 2005 ? 1_555 NZ ? K LYS 15 ? K LYS 16 ? 1_555 102.1 ? 3 O ? Z HOH . ? A HOH 2008 ? 1_555 PB ? X PB . ? K PB 2005 ? 1_555 NZ ? K LYS 15 ? K LYS 16 ? 1_555 67.9 ? 4 OE1 ? A GLU 4 ? A GLU 5 ? 1_555 PB ? Y PB . ? L PB 2009 ? 1_555 OE2 ? L GLU 2 ? L GLU 3 ? 1_555 156.9 ? 5 OE2 A A GLU 9 ? A GLU 10 ? 1_555 PB ? M PB . ? A PB 2003 ? 1_555 O ? BA HOH . ? C HOH 1007 ? 1_555 161.4 ? 6 OE2 A A GLU 9 ? A GLU 10 ? 1_555 PB ? M PB . ? A PB 2003 ? 1_555 O ? BA HOH . ? C HOH 1011 ? 1_555 144.0 ? 7 O ? BA HOH . ? C HOH 1007 ? 1_555 PB ? M PB . ? A PB 2003 ? 1_555 O ? BA HOH . ? C HOH 1011 ? 1_555 54.6 ? 8 OE1 ? E GLU 9 ? E GLU 10 ? 1_555 PB ? Q PB . ? E PB 2007 ? 1_555 OE2 ? E GLU 9 ? E GLU 10 ? 1_555 57.9 ? 9 OE1 ? E GLU 9 ? E GLU 10 ? 1_555 PB ? Q PB . ? E PB 2007 ? 1_555 O ? DA HOH . ? E HOH 2019 ? 1_555 92.7 ? 10 OE2 ? E GLU 9 ? E GLU 10 ? 1_555 PB ? Q PB . ? E PB 2007 ? 1_555 O ? DA HOH . ? E HOH 2019 ? 1_555 59.2 ? 11 OE1 ? E GLU 9 ? E GLU 10 ? 1_555 PB ? Q PB . ? E PB 2007 ? 1_555 OD1 ? H ZJU 1 ? H ZJU 2 ? 1_555 135.7 ? 12 OE2 ? E GLU 9 ? E GLU 10 ? 1_555 PB ? Q PB . ? E PB 2007 ? 1_555 OD1 ? H ZJU 1 ? H ZJU 2 ? 1_555 164.7 ? 13 O ? DA HOH . ? E HOH 2019 ? 1_555 PB ? Q PB . ? E PB 2007 ? 1_555 OD1 ? H ZJU 1 ? H ZJU 2 ? 1_555 108.6 ? 14 OE1 ? F GLU 9 ? F GLU 10 ? 1_555 PB ? U PB . ? H PB 2008 ? 4_555 O1 ? H ZJU 1 ? H ZJU 2 ? 1_555 72.2 ? 15 O ? FA HOH . ? G HOH 2008 ? 1_555 PB ? T PB . ? G PB 2001 ? 1_555 O1 ? K ZJU 1 ? K ZJU 2 ? 1_555 86.9 ? 16 O ? GA HOH . ? H HOH 2013 ? 1_555 PB ? W PB . ? I PB 2006 ? 1_555 O ? GA HOH . ? H HOH 2020 ? 1_555 58.1 ? 17 O ? GA HOH . ? H HOH 2013 ? 1_555 PB ? W PB . ? I PB 2006 ? 1_555 OE1 B I GLU 9 ? I GLU 10 ? 1_555 158.5 ? 18 O ? GA HOH . ? H HOH 2020 ? 1_555 PB ? W PB . ? I PB 2006 ? 1_555 OE1 B I GLU 9 ? I GLU 10 ? 1_555 143.4 ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B SO4 1001 ? 3 'BINDING SITE FOR RESIDUE SO4 B 1001' AC2 Software F SO4 1002 ? 5 'BINDING SITE FOR RESIDUE SO4 F 1002' AC3 Software I SO4 1003 ? 4 'BINDING SITE FOR RESIDUE SO4 I 1003' AC4 Software C SO4 1004 ? 3 'BINDING SITE FOR RESIDUE SO4 C 1004' AC5 Software G PB 2001 ? 2 'BINDING SITE FOR RESIDUE PB G 2001' AC6 Software D PB 2002 ? 1 'BINDING SITE FOR RESIDUE PB D 2002' AC7 Software A PB 2003 ? 3 'BINDING SITE FOR RESIDUE PB A 2003' AC9 Software K PB 2005 ? 2 'BINDING SITE FOR RESIDUE PB K 2005' BC1 Software I PB 2006 ? 3 'BINDING SITE FOR RESIDUE PB I 2006' BC2 Software E PB 2007 ? 2 'BINDING SITE FOR RESIDUE PB E 2007' BC3 Software H PB 2008 ? 2 'BINDING SITE FOR RESIDUE PB H 2008' BC4 Software L PB 2009 ? 2 'BINDING SITE FOR RESIDUE PB L 2009' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 ARG B 13 ? ARG B 14 . ? 1_555 ? 2 AC1 3 ARG J 8 ? ARG J 9 . ? 1_655 ? 3 AC1 3 ARG K 6 ? ARG K 7 . ? 1_655 ? 4 AC2 5 ARG D 6 ? ARG D 7 . ? 1_555 ? 5 AC2 5 ARG F 8 ? ARG F 9 . ? 1_555 ? 6 AC2 5 ARG G 13 ? ARG G 14 . ? 1_655 ? 7 AC2 5 HOH FA . ? HOH G 2008 . ? 1_655 ? 8 AC2 5 LYS I 15 ? LYS I 16 . ? 1_655 ? 9 AC3 4 ARG H 8 ? ARG H 9 . ? 1_555 ? 10 AC3 4 ARG I 6 ? ARG I 7 . ? 1_555 ? 11 AC3 4 LYS K 15 ? LYS K 16 . ? 1_555 ? 12 AC3 4 ARG L 13 ? ARG L 14 . ? 1_555 ? 13 AC4 3 ARG A 6 ? ARG A 7 . ? 1_555 ? 14 AC4 3 ARG C 8 ? ARG C 9 . ? 1_555 ? 15 AC4 3 ARG E 13 ? ARG E 14 . ? 1_555 ? 16 AC5 2 HOH FA . ? HOH G 2008 . ? 1_555 ? 17 AC5 2 LEU K 3 ? LEU K 4 . ? 1_545 ? 18 AC6 1 LEU D 3 ? LEU D 4 . ? 1_555 ? 19 AC7 3 GLU A 9 ? GLU A 10 . ? 1_555 ? 20 AC7 3 HOH BA . ? HOH C 1007 . ? 1_555 ? 21 AC7 3 HOH BA . ? HOH C 1011 . ? 1_555 ? 22 AC9 2 HOH Z . ? HOH A 2008 . ? 1_555 ? 23 AC9 2 LYS K 15 ? LYS K 16 . ? 1_555 ? 24 BC1 3 HOH GA . ? HOH H 2013 . ? 1_555 ? 25 BC1 3 HOH GA . ? HOH H 2020 . ? 1_555 ? 26 BC1 3 GLU I 9 ? GLU I 10 . ? 1_555 ? 27 BC2 2 GLU E 9 ? GLU E 10 . ? 1_555 ? 28 BC2 2 HOH DA . ? HOH E 2019 . ? 1_555 ? 29 BC3 2 GLU F 9 ? GLU F 10 . ? 4_455 ? 30 BC3 2 GLU H 2 ? GLU H 3 . ? 1_555 ? 31 BC4 2 GLU A 4 ? GLU A 5 . ? 1_555 ? 32 BC4 2 GLU L 2 ? GLU L 3 . ? 1_555 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OE2 H GLU 3 ? ? PB H PB 2008 ? ? 1.50 2 1 CD H GLU 3 ? ? PB H PB 2008 ? ? 1.65 3 1 O2 H ZJU 2 ? ? CG H GLU 3 ? ? 1.66 4 1 OE1 H GLU 3 ? ? PB H PB 2008 ? ? 1.80 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE B ARG 14 ? ? CZ B ARG 14 ? ? NH1 B ARG 14 ? ? 123.49 120.30 3.19 0.50 N 2 1 NE G ARG 14 ? ? CZ G ARG 14 ? ? NH1 G ARG 14 ? ? 123.55 120.30 3.25 0.50 N # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 GLU N N N N 41 GLU CA C N S 42 GLU C C N N 43 GLU O O N N 44 GLU CB C N N 45 GLU CG C N N 46 GLU CD C N N 47 GLU OE1 O N N 48 GLU OE2 O N N 49 GLU OXT O N N 50 GLU H H N N 51 GLU H2 H N N 52 GLU HA H N N 53 GLU HB2 H N N 54 GLU HB3 H N N 55 GLU HG2 H N N 56 GLU HG3 H N N 57 GLU HE2 H N N 58 GLU HXT H N N 59 HOH O O N N 60 HOH H1 H N N 61 HOH H2 H N N 62 ILE N N N N 63 ILE CA C N S 64 ILE C C N N 65 ILE O O N N 66 ILE CB C N S 67 ILE CG1 C N N 68 ILE CG2 C N N 69 ILE CD1 C N N 70 ILE OXT O N N 71 ILE H H N N 72 ILE H2 H N N 73 ILE HA H N N 74 ILE HB H N N 75 ILE HG12 H N N 76 ILE HG13 H N N 77 ILE HG21 H N N 78 ILE HG22 H N N 79 ILE HG23 H N N 80 ILE HD11 H N N 81 ILE HD12 H N N 82 ILE HD13 H N N 83 ILE HXT H N N 84 LEU N N N N 85 LEU CA C N S 86 LEU C C N N 87 LEU O O N N 88 LEU CB C N N 89 LEU CG C N N 90 LEU CD1 C N N 91 LEU CD2 C N N 92 LEU OXT O N N 93 LEU H H N N 94 LEU H2 H N N 95 LEU HA H N N 96 LEU HB2 H N N 97 LEU HB3 H N N 98 LEU HG H N N 99 LEU HD11 H N N 100 LEU HD12 H N N 101 LEU HD13 H N N 102 LEU HD21 H N N 103 LEU HD22 H N N 104 LEU HD23 H N N 105 LEU HXT H N N 106 LYS N N N N 107 LYS CA C N S 108 LYS C C N N 109 LYS O O N N 110 LYS CB C N N 111 LYS CG C N N 112 LYS CD C N N 113 LYS CE C N N 114 LYS NZ N N N 115 LYS OXT O N N 116 LYS H H N N 117 LYS H2 H N N 118 LYS HA H N N 119 LYS HB2 H N N 120 LYS HB3 H N N 121 LYS HG2 H N N 122 LYS HG3 H N N 123 LYS HD2 H N N 124 LYS HD3 H N N 125 LYS HE2 H N N 126 LYS HE3 H N N 127 LYS HZ1 H N N 128 LYS HZ2 H N N 129 LYS HZ3 H N N 130 LYS HXT H N N 131 PB PB PB N N 132 SO4 S S N N 133 SO4 O1 O N N 134 SO4 O2 O N N 135 SO4 O3 O N N 136 SO4 O4 O N N 137 ZJU O1 O N N 138 ZJU C1 C N N 139 ZJU O2 O N N 140 ZJU C2 C N N 141 ZJU C3 C N N 142 ZJU C4 C N N 143 ZJU O3 O N N 144 ZJU N N N N 145 ZJU CA C N S 146 ZJU CB C N N 147 ZJU CG C N N 148 ZJU OD2 O N N 149 ZJU OD1 O N N 150 ZJU C C N N 151 ZJU OXT O N N 152 ZJU O O N N 153 ZJU H1 H N N 154 ZJU H6 H N N 155 ZJU H3 H N N 156 ZJU H4 H N N 157 ZJU H5 H N N 158 ZJU H H N N 159 ZJU HA H N N 160 ZJU HB2 H N N 161 ZJU HB3 H N N 162 ZJU HD2 H N N 163 ZJU HXT H N N 164 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 GLU N CA sing N N 39 GLU N H sing N N 40 GLU N H2 sing N N 41 GLU CA C sing N N 42 GLU CA CB sing N N 43 GLU CA HA sing N N 44 GLU C O doub N N 45 GLU C OXT sing N N 46 GLU CB CG sing N N 47 GLU CB HB2 sing N N 48 GLU CB HB3 sing N N 49 GLU CG CD sing N N 50 GLU CG HG2 sing N N 51 GLU CG HG3 sing N N 52 GLU CD OE1 doub N N 53 GLU CD OE2 sing N N 54 GLU OE2 HE2 sing N N 55 GLU OXT HXT sing N N 56 HOH O H1 sing N N 57 HOH O H2 sing N N 58 ILE N CA sing N N 59 ILE N H sing N N 60 ILE N H2 sing N N 61 ILE CA C sing N N 62 ILE CA CB sing N N 63 ILE CA HA sing N N 64 ILE C O doub N N 65 ILE C OXT sing N N 66 ILE CB CG1 sing N N 67 ILE CB CG2 sing N N 68 ILE CB HB sing N N 69 ILE CG1 CD1 sing N N 70 ILE CG1 HG12 sing N N 71 ILE CG1 HG13 sing N N 72 ILE CG2 HG21 sing N N 73 ILE CG2 HG22 sing N N 74 ILE CG2 HG23 sing N N 75 ILE CD1 HD11 sing N N 76 ILE CD1 HD12 sing N N 77 ILE CD1 HD13 sing N N 78 ILE OXT HXT sing N N 79 LEU N CA sing N N 80 LEU N H sing N N 81 LEU N H2 sing N N 82 LEU CA C sing N N 83 LEU CA CB sing N N 84 LEU CA HA sing N N 85 LEU C O doub N N 86 LEU C OXT sing N N 87 LEU CB CG sing N N 88 LEU CB HB2 sing N N 89 LEU CB HB3 sing N N 90 LEU CG CD1 sing N N 91 LEU CG CD2 sing N N 92 LEU CG HG sing N N 93 LEU CD1 HD11 sing N N 94 LEU CD1 HD12 sing N N 95 LEU CD1 HD13 sing N N 96 LEU CD2 HD21 sing N N 97 LEU CD2 HD22 sing N N 98 LEU CD2 HD23 sing N N 99 LEU OXT HXT sing N N 100 LYS N CA sing N N 101 LYS N H sing N N 102 LYS N H2 sing N N 103 LYS CA C sing N N 104 LYS CA CB sing N N 105 LYS CA HA sing N N 106 LYS C O doub N N 107 LYS C OXT sing N N 108 LYS CB CG sing N N 109 LYS CB HB2 sing N N 110 LYS CB HB3 sing N N 111 LYS CG CD sing N N 112 LYS CG HG2 sing N N 113 LYS CG HG3 sing N N 114 LYS CD CE sing N N 115 LYS CD HD2 sing N N 116 LYS CD HD3 sing N N 117 LYS CE NZ sing N N 118 LYS CE HE2 sing N N 119 LYS CE HE3 sing N N 120 LYS NZ HZ1 sing N N 121 LYS NZ HZ2 sing N N 122 LYS NZ HZ3 sing N N 123 LYS OXT HXT sing N N 124 SO4 S O1 doub N N 125 SO4 S O2 doub N N 126 SO4 S O3 sing N N 127 SO4 S O4 sing N N 128 ZJU O1 C1 sing N N 129 ZJU C1 O2 doub N N 130 ZJU C1 C2 sing N N 131 ZJU C2 C3 sing N N 132 ZJU C3 C4 sing N N 133 ZJU C4 O3 doub N N 134 ZJU C4 N sing N N 135 ZJU N CA sing N N 136 ZJU CA CB sing N N 137 ZJU CB CG sing N N 138 ZJU CG OD2 sing N N 139 ZJU CG OD1 doub N N 140 ZJU CA C sing N N 141 ZJU C OXT sing N N 142 ZJU C O doub N N 143 ZJU O1 H1 sing N N 144 ZJU C2 H6 sing N N 145 ZJU C2 H3 sing N N 146 ZJU C3 H4 sing N N 147 ZJU C3 H5 sing N N 148 ZJU N H sing N N 149 ZJU CA HA sing N N 150 ZJU CB HB2 sing N N 151 ZJU CB HB3 sing N N 152 ZJU OD2 HD2 sing N N 153 ZJU OXT HXT sing N N 154 # _atom_sites.entry_id 1HQJ _atom_sites.fract_transf_matrix[1][1] 0.022556 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022285 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012339 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O PB S # loop_