data_1I2L # _entry.id 1I2L # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1I2L pdb_00001i2l 10.2210/pdb1i2l/pdb RCSB RCSB012824 ? ? WWPDB D_1000012824 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2003-09-02 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-04 5 'Structure model' 1 4 2024-02-07 6 'Structure model' 1 5 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Derived calculations' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Refinement description' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Database references' 7 5 'Structure model' 'Derived calculations' 8 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 5 5 'Structure model' struct_site 6 6 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 4 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 5 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1I2L _pdbx_database_status.recvd_initial_deposition_date 2001-02-09 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Jensen, P.Y.' 1 'Parsons, J.F.' 2 'Fisher, K.E.' 3 'Pachikara, A.S.' 4 'Tordova, M.' 5 'Howard, A.J.' 6 'Eisenstein, E.' 7 'Ladner, J.E.' 8 # _citation.id primary _citation.title 'Structure and Mechanism of Escherichia coli Aminodeoxychorismate Lyase' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Jensen, P.Y.' 1 ? primary 'Parsons, J.F.' 2 ? primary 'Fisher, K.E.' 3 ? primary 'Pachikara, A.S.' 4 ? primary 'Tordova, M.' 5 ? primary 'Howard, A.J.' 6 ? primary 'Eisenstein, E.' 7 ? primary 'Ladner, J.E.' 8 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man '4-AMINO-4-DEOXYCHORISMATE LYASE' 29745.031 1 4.-.-.- ? ? ? 2 non-polymer syn 'D-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL]-N,O-CYCLOSERYLAMIDE' 333.234 1 ? ? ? ? 3 water nat water 18.015 142 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MFLINGHKQESLAVSDRATQFGDGCFTTARVIDGKVSLLSAHIQRLQDACQRLMISCDFWPQLEQEMKTLAAEQQNGVLK VVISRGSGGRGYSTLNSGPATRILSVTAYPAHYDRLRNEGITLALSPVRLGRNPHLAGIKHLNRLEQVLIRSHLEQTNAD EALVLDSEGWVTECCAANLFWRKGNVVYTPRLDQAGVNGIMRQFCIRLLAQSSYQLVEVQASLEESLQADEMVICNALMP VMPVCACGDVSFSSATLYEYLAPLCERPN ; _entity_poly.pdbx_seq_one_letter_code_can ;MFLINGHKQESLAVSDRATQFGDGCFTTARVIDGKVSLLSAHIQRLQDACQRLMISCDFWPQLEQEMKTLAAEQQNGVLK VVISRGSGGRGYSTLNSGPATRILSVTAYPAHYDRLRNEGITLALSPVRLGRNPHLAGIKHLNRLEQVLIRSHLEQTNAD EALVLDSEGWVTECCAANLFWRKGNVVYTPRLDQAGVNGIMRQFCIRLLAQSSYQLVEVQASLEESLQADEMVICNALMP VMPVCACGDVSFSSATLYEYLAPLCERPN ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'D-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL]-N,O-CYCLOSERYLAMIDE' DCS 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 PHE n 1 3 LEU n 1 4 ILE n 1 5 ASN n 1 6 GLY n 1 7 HIS n 1 8 LYS n 1 9 GLN n 1 10 GLU n 1 11 SER n 1 12 LEU n 1 13 ALA n 1 14 VAL n 1 15 SER n 1 16 ASP n 1 17 ARG n 1 18 ALA n 1 19 THR n 1 20 GLN n 1 21 PHE n 1 22 GLY n 1 23 ASP n 1 24 GLY n 1 25 CYS n 1 26 PHE n 1 27 THR n 1 28 THR n 1 29 ALA n 1 30 ARG n 1 31 VAL n 1 32 ILE n 1 33 ASP n 1 34 GLY n 1 35 LYS n 1 36 VAL n 1 37 SER n 1 38 LEU n 1 39 LEU n 1 40 SER n 1 41 ALA n 1 42 HIS n 1 43 ILE n 1 44 GLN n 1 45 ARG n 1 46 LEU n 1 47 GLN n 1 48 ASP n 1 49 ALA n 1 50 CYS n 1 51 GLN n 1 52 ARG n 1 53 LEU n 1 54 MET n 1 55 ILE n 1 56 SER n 1 57 CYS n 1 58 ASP n 1 59 PHE n 1 60 TRP n 1 61 PRO n 1 62 GLN n 1 63 LEU n 1 64 GLU n 1 65 GLN n 1 66 GLU n 1 67 MET n 1 68 LYS n 1 69 THR n 1 70 LEU n 1 71 ALA n 1 72 ALA n 1 73 GLU n 1 74 GLN n 1 75 GLN n 1 76 ASN n 1 77 GLY n 1 78 VAL n 1 79 LEU n 1 80 LYS n 1 81 VAL n 1 82 VAL n 1 83 ILE n 1 84 SER n 1 85 ARG n 1 86 GLY n 1 87 SER n 1 88 GLY n 1 89 GLY n 1 90 ARG n 1 91 GLY n 1 92 TYR n 1 93 SER n 1 94 THR n 1 95 LEU n 1 96 ASN n 1 97 SER n 1 98 GLY n 1 99 PRO n 1 100 ALA n 1 101 THR n 1 102 ARG n 1 103 ILE n 1 104 LEU n 1 105 SER n 1 106 VAL n 1 107 THR n 1 108 ALA n 1 109 TYR n 1 110 PRO n 1 111 ALA n 1 112 HIS n 1 113 TYR n 1 114 ASP n 1 115 ARG n 1 116 LEU n 1 117 ARG n 1 118 ASN n 1 119 GLU n 1 120 GLY n 1 121 ILE n 1 122 THR n 1 123 LEU n 1 124 ALA n 1 125 LEU n 1 126 SER n 1 127 PRO n 1 128 VAL n 1 129 ARG n 1 130 LEU n 1 131 GLY n 1 132 ARG n 1 133 ASN n 1 134 PRO n 1 135 HIS n 1 136 LEU n 1 137 ALA n 1 138 GLY n 1 139 ILE n 1 140 LYS n 1 141 HIS n 1 142 LEU n 1 143 ASN n 1 144 ARG n 1 145 LEU n 1 146 GLU n 1 147 GLN n 1 148 VAL n 1 149 LEU n 1 150 ILE n 1 151 ARG n 1 152 SER n 1 153 HIS n 1 154 LEU n 1 155 GLU n 1 156 GLN n 1 157 THR n 1 158 ASN n 1 159 ALA n 1 160 ASP n 1 161 GLU n 1 162 ALA n 1 163 LEU n 1 164 VAL n 1 165 LEU n 1 166 ASP n 1 167 SER n 1 168 GLU n 1 169 GLY n 1 170 TRP n 1 171 VAL n 1 172 THR n 1 173 GLU n 1 174 CYS n 1 175 CYS n 1 176 ALA n 1 177 ALA n 1 178 ASN n 1 179 LEU n 1 180 PHE n 1 181 TRP n 1 182 ARG n 1 183 LYS n 1 184 GLY n 1 185 ASN n 1 186 VAL n 1 187 VAL n 1 188 TYR n 1 189 THR n 1 190 PRO n 1 191 ARG n 1 192 LEU n 1 193 ASP n 1 194 GLN n 1 195 ALA n 1 196 GLY n 1 197 VAL n 1 198 ASN n 1 199 GLY n 1 200 ILE n 1 201 MET n 1 202 ARG n 1 203 GLN n 1 204 PHE n 1 205 CYS n 1 206 ILE n 1 207 ARG n 1 208 LEU n 1 209 LEU n 1 210 ALA n 1 211 GLN n 1 212 SER n 1 213 SER n 1 214 TYR n 1 215 GLN n 1 216 LEU n 1 217 VAL n 1 218 GLU n 1 219 VAL n 1 220 GLN n 1 221 ALA n 1 222 SER n 1 223 LEU n 1 224 GLU n 1 225 GLU n 1 226 SER n 1 227 LEU n 1 228 GLN n 1 229 ALA n 1 230 ASP n 1 231 GLU n 1 232 MET n 1 233 VAL n 1 234 ILE n 1 235 CYS n 1 236 ASN n 1 237 ALA n 1 238 LEU n 1 239 MET n 1 240 PRO n 1 241 VAL n 1 242 MET n 1 243 PRO n 1 244 VAL n 1 245 CYS n 1 246 ALA n 1 247 CYS n 1 248 GLY n 1 249 ASP n 1 250 VAL n 1 251 SER n 1 252 PHE n 1 253 SER n 1 254 SER n 1 255 ALA n 1 256 THR n 1 257 LEU n 1 258 TYR n 1 259 GLU n 1 260 TYR n 1 261 LEU n 1 262 ALA n 1 263 PRO n 1 264 LEU n 1 265 CYS n 1 266 GLU n 1 267 ARG n 1 268 PRO n 1 269 ASN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Escherichia _entity_src_gen.pdbx_gene_src_gene PABC _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 562 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DCS non-polymer . 'D-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL]-N,O-CYCLOSERYLAMIDE' D-PYRIDOXYL-N,O-CYCLOSERYLAMIDE-5-MONOPHOSPHATE 'C11 H16 N3 O7 P' 333.234 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 PHE 2 2 2 PHE PHE A . n A 1 3 LEU 3 3 3 LEU LEU A . n A 1 4 ILE 4 4 4 ILE ILE A . n A 1 5 ASN 5 5 5 ASN ASN A . n A 1 6 GLY 6 6 6 GLY GLY A . n A 1 7 HIS 7 7 7 HIS HIS A . n A 1 8 LYS 8 8 8 LYS LYS A . n A 1 9 GLN 9 9 9 GLN GLN A . n A 1 10 GLU 10 10 10 GLU GLU A . n A 1 11 SER 11 11 11 SER SER A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 ALA 13 13 13 ALA ALA A . n A 1 14 VAL 14 14 14 VAL VAL A . n A 1 15 SER 15 15 15 SER SER A . n A 1 16 ASP 16 16 16 ASP ASP A . n A 1 17 ARG 17 17 17 ARG ARG A . n A 1 18 ALA 18 18 18 ALA ALA A . n A 1 19 THR 19 19 19 THR THR A . n A 1 20 GLN 20 20 20 GLN GLN A . n A 1 21 PHE 21 21 21 PHE PHE A . n A 1 22 GLY 22 22 22 GLY GLY A . n A 1 23 ASP 23 23 23 ASP ASP A . n A 1 24 GLY 24 24 24 GLY GLY A . n A 1 25 CYS 25 25 25 CYS CYS A . n A 1 26 PHE 26 26 26 PHE PHE A . n A 1 27 THR 27 27 27 THR THR A . n A 1 28 THR 28 28 28 THR THR A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 ARG 30 30 30 ARG ARG A . n A 1 31 VAL 31 31 31 VAL VAL A . n A 1 32 ILE 32 32 32 ILE ILE A . n A 1 33 ASP 33 33 33 ASP ASP A . n A 1 34 GLY 34 34 34 GLY GLY A . n A 1 35 LYS 35 35 35 LYS LYS A . n A 1 36 VAL 36 36 36 VAL VAL A . n A 1 37 SER 37 37 37 SER SER A . n A 1 38 LEU 38 38 38 LEU LEU A . n A 1 39 LEU 39 39 39 LEU LEU A . n A 1 40 SER 40 40 40 SER SER A . n A 1 41 ALA 41 41 41 ALA ALA A . n A 1 42 HIS 42 42 42 HIS HIS A . n A 1 43 ILE 43 43 43 ILE ILE A . n A 1 44 GLN 44 44 44 GLN GLN A . n A 1 45 ARG 45 45 45 ARG ARG A . n A 1 46 LEU 46 46 46 LEU LEU A . n A 1 47 GLN 47 47 47 GLN GLN A . n A 1 48 ASP 48 48 48 ASP ASP A . n A 1 49 ALA 49 49 49 ALA ALA A . n A 1 50 CYS 50 50 50 CYS CYS A . n A 1 51 GLN 51 51 51 GLN GLN A . n A 1 52 ARG 52 52 52 ARG ARG A . n A 1 53 LEU 53 53 53 LEU LEU A . n A 1 54 MET 54 54 54 MET MET A . n A 1 55 ILE 55 55 55 ILE ILE A . n A 1 56 SER 56 56 56 SER SER A . n A 1 57 CYS 57 57 57 CYS CYS A . n A 1 58 ASP 58 58 58 ASP ASP A . n A 1 59 PHE 59 59 59 PHE PHE A . n A 1 60 TRP 60 60 60 TRP TRP A . n A 1 61 PRO 61 61 61 PRO PRO A . n A 1 62 GLN 62 62 62 GLN GLN A . n A 1 63 LEU 63 63 63 LEU LEU A . n A 1 64 GLU 64 64 64 GLU GLU A . n A 1 65 GLN 65 65 65 GLN GLN A . n A 1 66 GLU 66 66 66 GLU GLU A . n A 1 67 MET 67 67 67 MET MET A . n A 1 68 LYS 68 68 68 LYS LYS A . n A 1 69 THR 69 69 69 THR THR A . n A 1 70 LEU 70 70 70 LEU LEU A . n A 1 71 ALA 71 71 71 ALA ALA A . n A 1 72 ALA 72 72 72 ALA ALA A . n A 1 73 GLU 73 73 73 GLU GLU A . n A 1 74 GLN 74 74 74 GLN GLN A . n A 1 75 GLN 75 75 75 GLN GLN A . n A 1 76 ASN 76 76 76 ASN ASN A . n A 1 77 GLY 77 77 77 GLY GLY A . n A 1 78 VAL 78 78 78 VAL VAL A . n A 1 79 LEU 79 79 79 LEU LEU A . n A 1 80 LYS 80 80 80 LYS LYS A . n A 1 81 VAL 81 81 81 VAL VAL A . n A 1 82 VAL 82 82 82 VAL VAL A . n A 1 83 ILE 83 83 83 ILE ILE A . n A 1 84 SER 84 84 84 SER SER A . n A 1 85 ARG 85 85 85 ARG ARG A . n A 1 86 GLY 86 86 86 GLY GLY A . n A 1 87 SER 87 87 87 SER SER A . n A 1 88 GLY 88 88 88 GLY GLY A . n A 1 89 GLY 89 89 89 GLY GLY A . n A 1 90 ARG 90 90 90 ARG ARG A . n A 1 91 GLY 91 91 91 GLY GLY A . n A 1 92 TYR 92 92 92 TYR TYR A . n A 1 93 SER 93 93 93 SER SER A . n A 1 94 THR 94 94 94 THR THR A . n A 1 95 LEU 95 95 95 LEU LEU A . n A 1 96 ASN 96 96 96 ASN ASN A . n A 1 97 SER 97 97 97 SER SER A . n A 1 98 GLY 98 98 98 GLY GLY A . n A 1 99 PRO 99 99 99 PRO PRO A . n A 1 100 ALA 100 100 100 ALA ALA A . n A 1 101 THR 101 101 101 THR THR A . n A 1 102 ARG 102 102 102 ARG ARG A . n A 1 103 ILE 103 103 103 ILE ILE A . n A 1 104 LEU 104 104 104 LEU LEU A . n A 1 105 SER 105 105 105 SER SER A . n A 1 106 VAL 106 106 106 VAL VAL A . n A 1 107 THR 107 107 107 THR THR A . n A 1 108 ALA 108 108 108 ALA ALA A . n A 1 109 TYR 109 109 109 TYR TYR A . n A 1 110 PRO 110 110 110 PRO PRO A . n A 1 111 ALA 111 111 111 ALA ALA A . n A 1 112 HIS 112 112 112 HIS HIS A . n A 1 113 TYR 113 113 113 TYR TYR A . n A 1 114 ASP 114 114 114 ASP ASP A . n A 1 115 ARG 115 115 115 ARG ARG A . n A 1 116 LEU 116 116 116 LEU LEU A . n A 1 117 ARG 117 117 117 ARG ARG A . n A 1 118 ASN 118 118 118 ASN ASN A . n A 1 119 GLU 119 119 119 GLU GLU A . n A 1 120 GLY 120 120 120 GLY GLY A . n A 1 121 ILE 121 121 121 ILE ILE A . n A 1 122 THR 122 122 122 THR THR A . n A 1 123 LEU 123 123 123 LEU LEU A . n A 1 124 ALA 124 124 124 ALA ALA A . n A 1 125 LEU 125 125 125 LEU LEU A . n A 1 126 SER 126 126 126 SER SER A . n A 1 127 PRO 127 127 127 PRO PRO A . n A 1 128 VAL 128 128 128 VAL VAL A . n A 1 129 ARG 129 129 129 ARG ARG A . n A 1 130 LEU 130 130 130 LEU LEU A . n A 1 131 GLY 131 131 131 GLY GLY A . n A 1 132 ARG 132 132 132 ARG ARG A . n A 1 133 ASN 133 133 133 ASN ASN A . n A 1 134 PRO 134 134 134 PRO PRO A . n A 1 135 HIS 135 135 135 HIS HIS A . n A 1 136 LEU 136 136 136 LEU LEU A . n A 1 137 ALA 137 137 137 ALA ALA A . n A 1 138 GLY 138 138 138 GLY GLY A . n A 1 139 ILE 139 139 139 ILE ILE A . n A 1 140 LYS 140 140 140 LYS LYS A . n A 1 141 HIS 141 141 141 HIS HIS A . n A 1 142 LEU 142 142 142 LEU LEU A . n A 1 143 ASN 143 143 143 ASN ASN A . n A 1 144 ARG 144 144 144 ARG ARG A . n A 1 145 LEU 145 145 145 LEU LEU A . n A 1 146 GLU 146 146 146 GLU GLU A . n A 1 147 GLN 147 147 147 GLN GLN A . n A 1 148 VAL 148 148 148 VAL VAL A . n A 1 149 LEU 149 149 149 LEU LEU A . n A 1 150 ILE 150 150 150 ILE ILE A . n A 1 151 ARG 151 151 151 ARG ARG A . n A 1 152 SER 152 152 152 SER SER A . n A 1 153 HIS 153 153 153 HIS HIS A . n A 1 154 LEU 154 154 154 LEU LEU A . n A 1 155 GLU 155 155 155 GLU GLU A . n A 1 156 GLN 156 156 156 GLN GLN A . n A 1 157 THR 157 157 157 THR THR A . n A 1 158 ASN 158 158 158 ASN ASN A . n A 1 159 ALA 159 159 159 ALA ALA A . n A 1 160 ASP 160 160 160 ASP ASP A . n A 1 161 GLU 161 161 161 GLU GLU A . n A 1 162 ALA 162 162 162 ALA ALA A . n A 1 163 LEU 163 163 163 LEU LEU A . n A 1 164 VAL 164 164 164 VAL VAL A . n A 1 165 LEU 165 165 165 LEU LEU A . n A 1 166 ASP 166 166 166 ASP ASP A . n A 1 167 SER 167 167 167 SER SER A . n A 1 168 GLU 168 168 168 GLU GLU A . n A 1 169 GLY 169 169 169 GLY GLY A . n A 1 170 TRP 170 170 170 TRP TRP A . n A 1 171 VAL 171 171 171 VAL VAL A . n A 1 172 THR 172 172 172 THR THR A . n A 1 173 GLU 173 173 173 GLU GLU A . n A 1 174 CYS 174 174 174 CYS CYS A . n A 1 175 CYS 175 175 175 CYS CYS A . n A 1 176 ALA 176 176 176 ALA ALA A . n A 1 177 ALA 177 177 177 ALA ALA A . n A 1 178 ASN 178 178 178 ASN ASN A . n A 1 179 LEU 179 179 179 LEU LEU A . n A 1 180 PHE 180 180 180 PHE PHE A . n A 1 181 TRP 181 181 181 TRP TRP A . n A 1 182 ARG 182 182 182 ARG ARG A . n A 1 183 LYS 183 183 183 LYS LYS A . n A 1 184 GLY 184 184 184 GLY GLY A . n A 1 185 ASN 185 185 185 ASN ASN A . n A 1 186 VAL 186 186 186 VAL VAL A . n A 1 187 VAL 187 187 187 VAL VAL A . n A 1 188 TYR 188 188 188 TYR TYR A . n A 1 189 THR 189 189 189 THR THR A . n A 1 190 PRO 190 190 190 PRO PRO A . n A 1 191 ARG 191 191 191 ARG ARG A . n A 1 192 LEU 192 192 192 LEU LEU A . n A 1 193 ASP 193 193 193 ASP ASP A . n A 1 194 GLN 194 194 194 GLN GLN A . n A 1 195 ALA 195 195 195 ALA ALA A . n A 1 196 GLY 196 196 196 GLY GLY A . n A 1 197 VAL 197 197 197 VAL VAL A . n A 1 198 ASN 198 198 198 ASN ASN A . n A 1 199 GLY 199 199 199 GLY GLY A . n A 1 200 ILE 200 200 200 ILE ILE A . n A 1 201 MET 201 201 201 MET MET A . n A 1 202 ARG 202 202 202 ARG ARG A . n A 1 203 GLN 203 203 203 GLN GLN A . n A 1 204 PHE 204 204 204 PHE PHE A . n A 1 205 CYS 205 205 205 CYS CYS A . n A 1 206 ILE 206 206 206 ILE ILE A . n A 1 207 ARG 207 207 207 ARG ARG A . n A 1 208 LEU 208 208 208 LEU LEU A . n A 1 209 LEU 209 209 209 LEU LEU A . n A 1 210 ALA 210 210 210 ALA ALA A . n A 1 211 GLN 211 211 211 GLN GLN A . n A 1 212 SER 212 212 212 SER SER A . n A 1 213 SER 213 213 213 SER SER A . n A 1 214 TYR 214 214 214 TYR TYR A . n A 1 215 GLN 215 215 215 GLN GLN A . n A 1 216 LEU 216 216 216 LEU LEU A . n A 1 217 VAL 217 217 217 VAL VAL A . n A 1 218 GLU 218 218 218 GLU GLU A . n A 1 219 VAL 219 219 219 VAL VAL A . n A 1 220 GLN 220 220 220 GLN GLN A . n A 1 221 ALA 221 221 221 ALA ALA A . n A 1 222 SER 222 222 222 SER SER A . n A 1 223 LEU 223 223 223 LEU LEU A . n A 1 224 GLU 224 224 224 GLU GLU A . n A 1 225 GLU 225 225 225 GLU GLU A . n A 1 226 SER 226 226 226 SER SER A . n A 1 227 LEU 227 227 227 LEU LEU A . n A 1 228 GLN 228 228 228 GLN GLN A . n A 1 229 ALA 229 229 229 ALA ALA A . n A 1 230 ASP 230 230 230 ASP ASP A . n A 1 231 GLU 231 231 231 GLU GLU A . n A 1 232 MET 232 232 232 MET MET A . n A 1 233 VAL 233 233 233 VAL VAL A . n A 1 234 ILE 234 234 234 ILE ILE A . n A 1 235 CYS 235 235 235 CYS CYS A . n A 1 236 ASN 236 236 236 ASN ASN A . n A 1 237 ALA 237 237 237 ALA ALA A . n A 1 238 LEU 238 238 238 LEU LEU A . n A 1 239 MET 239 239 239 MET MET A . n A 1 240 PRO 240 240 240 PRO PRO A . n A 1 241 VAL 241 241 241 VAL VAL A . n A 1 242 MET 242 242 242 MET MET A . n A 1 243 PRO 243 243 243 PRO PRO A . n A 1 244 VAL 244 244 244 VAL VAL A . n A 1 245 CYS 245 245 245 CYS CYS A . n A 1 246 ALA 246 246 246 ALA ALA A . n A 1 247 CYS 247 247 247 CYS CYS A . n A 1 248 GLY 248 248 248 GLY GLY A . n A 1 249 ASP 249 249 249 ASP ASP A . n A 1 250 VAL 250 250 250 VAL VAL A . n A 1 251 SER 251 251 251 SER SER A . n A 1 252 PHE 252 252 252 PHE PHE A . n A 1 253 SER 253 253 253 SER SER A . n A 1 254 SER 254 254 254 SER SER A . n A 1 255 ALA 255 255 255 ALA ALA A . n A 1 256 THR 256 256 256 THR THR A . n A 1 257 LEU 257 257 257 LEU LEU A . n A 1 258 TYR 258 258 258 TYR TYR A . n A 1 259 GLU 259 259 259 GLU GLU A . n A 1 260 TYR 260 260 260 TYR TYR A . n A 1 261 LEU 261 261 261 LEU LEU A . n A 1 262 ALA 262 262 262 ALA ALA A . n A 1 263 PRO 263 263 263 PRO PRO A . n A 1 264 LEU 264 264 264 LEU LEU A . n A 1 265 CYS 265 265 265 CYS CYS A . n A 1 266 GLU 266 266 266 GLU GLU A . n A 1 267 ARG 267 267 267 ARG ARG A . n A 1 268 PRO 268 268 268 PRO PRO A . n A 1 269 ASN 269 269 269 ASN ASN A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DCS 1 301 301 DCS SCP A . C 3 HOH 1 402 402 HOH WAT A . C 3 HOH 2 403 403 HOH WAT A . C 3 HOH 3 407 407 HOH WAT A . C 3 HOH 4 410 410 HOH WAT A . C 3 HOH 5 413 413 HOH WAT A . C 3 HOH 6 414 414 HOH WAT A . C 3 HOH 7 418 418 HOH WAT A . C 3 HOH 8 419 419 HOH WAT A . C 3 HOH 9 420 420 HOH WAT A . C 3 HOH 10 422 422 HOH WAT A . C 3 HOH 11 423 423 HOH WAT A . C 3 HOH 12 424 424 HOH WAT A . C 3 HOH 13 425 425 HOH WAT A . C 3 HOH 14 428 428 HOH WAT A . C 3 HOH 15 429 429 HOH WAT A . C 3 HOH 16 430 430 HOH WAT A . C 3 HOH 17 435 435 HOH WAT A . C 3 HOH 18 436 436 HOH WAT A . C 3 HOH 19 437 437 HOH WAT A . C 3 HOH 20 440 440 HOH WAT A . C 3 HOH 21 441 441 HOH WAT A . C 3 HOH 22 445 445 HOH WAT A . C 3 HOH 23 447 447 HOH WAT A . C 3 HOH 24 448 448 HOH WAT A . C 3 HOH 25 450 450 HOH WAT A . C 3 HOH 26 454 454 HOH WAT A . C 3 HOH 27 457 457 HOH WAT A . C 3 HOH 28 459 459 HOH WAT A . C 3 HOH 29 460 460 HOH WAT A . C 3 HOH 30 461 461 HOH WAT A . C 3 HOH 31 466 466 HOH WAT A . C 3 HOH 32 474 474 HOH WAT A . C 3 HOH 33 475 475 HOH WAT A . C 3 HOH 34 477 477 HOH WAT A . C 3 HOH 35 480 480 HOH WAT A . C 3 HOH 36 482 482 HOH WAT A . C 3 HOH 37 487 487 HOH WAT A . C 3 HOH 38 488 488 HOH WAT A . C 3 HOH 39 489 489 HOH WAT A . C 3 HOH 40 491 491 HOH WAT A . C 3 HOH 41 493 493 HOH WAT A . C 3 HOH 42 494 494 HOH WAT A . C 3 HOH 43 496 496 HOH WAT A . C 3 HOH 44 498 498 HOH WAT A . C 3 HOH 45 499 499 HOH WAT A . C 3 HOH 46 500 500 HOH WAT A . C 3 HOH 47 501 501 HOH WAT A . C 3 HOH 48 502 502 HOH WAT A . C 3 HOH 49 503 503 HOH WAT A . C 3 HOH 50 506 506 HOH WAT A . C 3 HOH 51 510 510 HOH WAT A . C 3 HOH 52 511 511 HOH WAT A . C 3 HOH 53 512 512 HOH WAT A . C 3 HOH 54 513 513 HOH WAT A . C 3 HOH 55 515 515 HOH WAT A . C 3 HOH 56 516 516 HOH WAT A . C 3 HOH 57 517 517 HOH WAT A . C 3 HOH 58 518 518 HOH WAT A . C 3 HOH 59 521 521 HOH WAT A . C 3 HOH 60 522 522 HOH WAT A . C 3 HOH 61 523 523 HOH WAT A . C 3 HOH 62 524 524 HOH WAT A . C 3 HOH 63 526 526 HOH WAT A . C 3 HOH 64 527 527 HOH WAT A . C 3 HOH 65 530 530 HOH WAT A . C 3 HOH 66 531 531 HOH WAT A . C 3 HOH 67 532 532 HOH WAT A . C 3 HOH 68 533 533 HOH WAT A . C 3 HOH 69 534 534 HOH WAT A . C 3 HOH 70 536 536 HOH WAT A . C 3 HOH 71 537 537 HOH WAT A . C 3 HOH 72 539 539 HOH WAT A . C 3 HOH 73 540 540 HOH WAT A . C 3 HOH 74 541 541 HOH WAT A . C 3 HOH 75 542 542 HOH WAT A . C 3 HOH 76 543 543 HOH WAT A . C 3 HOH 77 547 547 HOH WAT A . C 3 HOH 78 551 551 HOH WAT A . C 3 HOH 79 556 556 HOH WAT A . C 3 HOH 80 562 562 HOH WAT A . C 3 HOH 81 563 563 HOH WAT A . C 3 HOH 82 564 564 HOH WAT A . C 3 HOH 83 566 566 HOH WAT A . C 3 HOH 84 568 568 HOH WAT A . C 3 HOH 85 574 574 HOH WAT A . C 3 HOH 86 577 577 HOH WAT A . C 3 HOH 87 582 582 HOH WAT A . C 3 HOH 88 583 583 HOH WAT A . C 3 HOH 89 594 594 HOH WAT A . C 3 HOH 90 603 603 HOH WAT A . C 3 HOH 91 606 606 HOH WAT A . C 3 HOH 92 801 801 HOH WAT A . C 3 HOH 93 802 802 HOH WAT A . C 3 HOH 94 803 803 HOH WAT A . C 3 HOH 95 804 804 HOH WAT A . C 3 HOH 96 805 805 HOH WAT A . C 3 HOH 97 806 806 HOH WAT A . C 3 HOH 98 807 807 HOH WAT A . C 3 HOH 99 808 808 HOH WAT A . C 3 HOH 100 809 809 HOH WAT A . C 3 HOH 101 810 810 HOH WAT A . C 3 HOH 102 811 811 HOH WAT A . C 3 HOH 103 812 812 HOH WAT A . C 3 HOH 104 813 813 HOH WAT A . C 3 HOH 105 814 814 HOH WAT A . C 3 HOH 106 815 815 HOH WAT A . C 3 HOH 107 816 816 HOH WAT A . C 3 HOH 108 817 817 HOH WAT A . C 3 HOH 109 818 818 HOH WAT A . C 3 HOH 110 819 819 HOH WAT A . C 3 HOH 111 820 820 HOH WAT A . C 3 HOH 112 821 821 HOH WAT A . C 3 HOH 113 822 822 HOH WAT A . C 3 HOH 114 823 823 HOH WAT A . C 3 HOH 115 824 824 HOH WAT A . C 3 HOH 116 825 825 HOH WAT A . C 3 HOH 117 826 826 HOH WAT A . C 3 HOH 118 827 827 HOH WAT A . C 3 HOH 119 828 828 HOH WAT A . C 3 HOH 120 829 829 HOH WAT A . C 3 HOH 121 830 830 HOH WAT A . C 3 HOH 122 831 831 HOH WAT A . C 3 HOH 123 832 832 HOH WAT A . C 3 HOH 124 833 833 HOH WAT A . C 3 HOH 125 834 834 HOH WAT A . C 3 HOH 126 835 835 HOH WAT A . C 3 HOH 127 836 836 HOH WAT A . C 3 HOH 128 837 837 HOH WAT A . C 3 HOH 129 838 838 HOH WAT A . C 3 HOH 130 839 839 HOH WAT A . C 3 HOH 131 840 840 HOH WAT A . C 3 HOH 132 841 841 HOH WAT A . C 3 HOH 133 842 842 HOH WAT A . C 3 HOH 134 843 843 HOH WAT A . C 3 HOH 135 844 844 HOH WAT A . C 3 HOH 136 845 845 HOH WAT A . C 3 HOH 137 846 846 HOH WAT A . C 3 HOH 138 847 847 HOH WAT A . C 3 HOH 139 848 848 HOH WAT A . C 3 HOH 140 849 849 HOH WAT A . C 3 HOH 141 850 850 HOH WAT A . C 3 HOH 142 851 851 HOH WAT A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-GEN 'data scaling' . ? 1 X-GEN 'data reduction' . ? 2 CNS refinement . ? 3 CNS phasing . ? 4 # _cell.entry_id 1I2L _cell.length_a 39.494 _cell.length_b 72.060 _cell.length_c 81.662 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1I2L _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 # _exptl.entry_id 1I2L _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2 _exptl_crystal.density_percent_sol 37.01 _exptl_crystal.description ;THE WATER MOLECULES HAVE BEEN ORDERED SO THAT THOSE THAT AGREE WITHIN 1.0 A OF WATER MOLECULES IN THE ADC LYASE 1.8 A STRUCTURE WITHOUT AN INHIBITOR ARE NUMBERED THE SAME. OTHER WATER MOLECULES ARE NUMBERED STARTING WITH 801. ; # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6 _exptl_crystal_grow.pdbx_details '20% PEG 4000, 0.2M magnesium acetate, 0.1M HEPES, pH 6, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 115 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2000-02-27 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.98790 1.0 2 0.9879 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 17-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 17-ID _diffrn_source.pdbx_wavelength 0.98790 _diffrn_source.pdbx_wavelength_list 0.9879 # _reflns.entry_id 1I2L _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 36.0 _reflns.d_resolution_high 2.30 _reflns.number_obs 10442 _reflns.number_all ? _reflns.percent_possible_obs 95.8 _reflns.pdbx_Rmerge_I_obs 0.088 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 10.0 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.1 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.3 _reflns_shell.d_res_low 2.4 _reflns_shell.percent_possible_all 91.7 _reflns_shell.Rmerge_I_obs 0.217 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.7 _reflns_shell.pdbx_redundancy 3.8 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1I2L _refine.ls_number_reflns_obs 9900 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_d_res_low 36.00 _refine.ls_d_res_high 2.3 _refine.ls_percent_reflns_obs 95.8 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.183 _refine.ls_R_factor_R_free 0.275 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5 _refine.ls_number_reflns_R_free 542 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method 'FREE R' _refine.details ? _refine.pdbx_starting_model 'ADC LYASE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2079 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 22 _refine_hist.number_atoms_solvent 142 _refine_hist.number_atoms_total 2243 _refine_hist.d_res_high 2.3 _refine_hist.d_res_low 36.00 # _database_PDB_matrix.entry_id 1I2L _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.000000 _database_PDB_matrix.origx_vector[2] 0.000000 _database_PDB_matrix.origx_vector[3] 0.000000 # _struct.entry_id 1I2L _struct.title 'DEOXYCHORISMATE LYASE FROM ESCHERICHIA COLI WITH INHIBITOR' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1I2L _struct_keywords.pdbx_keywords LYASE _struct_keywords.text 'LYASE, PYRIDOXAL PHOSPHATE, AMINODEOXYCHORISMATE, PABC, D-CYCLOSERINE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PABC_ECOLI _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MFLINGHKQESLAVSDRATQFGDGCFTTARVIDGKVSLLSAHIQRLQDACQRLMISCDFWPQLEQEMKTLAAEQQNGVLK VVISRGSGGRGYSTLNSGPATRILSVTAYPAHYDRLRNEGITLALSPVRLGRNPHLAGIKHLNRLEQVLIRSHLEQTNAD EALVLDSEGWVTECCAANLFWRKGNVVYTPRLDQAGVNGIMRQFCIRLLAQSSYQLVEVQASLEESLQADEMVICNALMP VMPVCACGDVSFSSATLYEYLAPLCERPN ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_accession P28305 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1I2L _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 269 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P28305 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 269 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 269 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5810 ? 1 MORE -31 ? 1 'SSA (A^2)' 20440 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_655 -x+1,-y,z -1.0000000000 0.0000000000 0.0000000000 39.4940000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # _struct_biol.id 1 _struct_biol.details ;The second chain in the dimer is generated by the crystal two fold: Use the symmetry -x,-y,z and add one cell in X ; _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 16 ? GLY A 22 ? ASP A 16 GLY A 22 1 ? 7 HELX_P HELX_P2 2 LEU A 38 ? LEU A 53 ? LEU A 38 LEU A 53 1 ? 16 HELX_P HELX_P3 3 PHE A 59 ? GLN A 75 ? PHE A 59 GLN A 75 1 ? 17 HELX_P HELX_P4 4 ALA A 111 ? ASN A 118 ? ALA A 111 ASN A 118 1 ? 8 HELX_P HELX_P5 5 ARG A 144 ? GLU A 155 ? ARG A 144 GLU A 155 1 ? 12 HELX_P HELX_P6 6 GLY A 199 ? SER A 212 ? GLY A 199 SER A 212 1 ? 14 HELX_P HELX_P7 7 SER A 222 ? LEU A 227 ? SER A 222 LEU A 227 1 ? 6 HELX_P HELX_P8 8 ALA A 255 ? GLU A 266 ? ALA A 255 GLU A 266 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLY 98 A . ? GLY 98 A PRO 99 A ? PRO 99 A 1 0.16 2 MET 239 A . ? MET 239 A PRO 240 A ? PRO 240 A 1 -0.22 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 8 ? C ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? parallel B 6 7 ? parallel B 7 8 ? anti-parallel C 1 2 ? parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel C 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 HIS A 7 ? GLN A 9 ? HIS A 7 GLN A 9 A 2 PHE A 2 ? ILE A 4 ? PHE A 2 ILE A 4 A 3 THR A 101 ? THR A 107 ? THR A 101 THR A 107 A 4 GLY A 77 ? SER A 84 ? GLY A 77 SER A 84 A 5 GLY A 24 ? ILE A 32 ? GLY A 24 ILE A 32 A 6 LYS A 35 ? VAL A 36 ? LYS A 35 VAL A 36 B 1 GLN A 215 ? VAL A 219 ? GLN A 215 VAL A 219 B 2 VAL A 186 ? PRO A 190 ? VAL A 186 PRO A 190 B 3 ASN A 178 ? LYS A 183 ? ASN A 178 LYS A 183 B 4 GLU A 231 ? CYS A 235 ? GLU A 231 CYS A 235 B 5 VAL A 241 ? CYS A 247 ? VAL A 241 CYS A 247 B 6 ILE A 121 ? LEU A 125 ? ILE A 121 LEU A 125 B 7 GLU A 161 ? LEU A 165 ? GLU A 161 LEU A 165 B 8 VAL A 171 ? GLU A 173 ? VAL A 171 GLU A 173 C 1 GLN A 215 ? VAL A 219 ? GLN A 215 VAL A 219 C 2 VAL A 186 ? PRO A 190 ? VAL A 186 PRO A 190 C 3 ASN A 178 ? LYS A 183 ? ASN A 178 LYS A 183 C 4 GLU A 231 ? CYS A 235 ? GLU A 231 CYS A 235 C 5 VAL A 241 ? CYS A 247 ? VAL A 241 CYS A 247 C 6 VAL A 250 ? SER A 251 ? VAL A 250 SER A 251 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLN A 9 ? N GLN A 9 O PHE A 2 ? O PHE A 2 A 2 3 N LEU A 3 ? N LEU A 3 O LEU A 104 ? O LEU A 104 A 3 4 O THR A 107 ? O THR A 107 N VAL A 78 ? N VAL A 78 A 4 5 N ILE A 83 ? N ILE A 83 O CYS A 25 ? O CYS A 25 A 5 6 N ILE A 32 ? N ILE A 32 O LYS A 35 ? O LYS A 35 B 1 2 O GLN A 215 ? O GLN A 215 N VAL A 187 ? N VAL A 187 B 2 3 N TYR A 188 ? N TYR A 188 O TRP A 181 ? O TRP A 181 B 3 4 N ARG A 182 ? N ARG A 182 O GLU A 231 ? O GLU A 231 B 4 5 O ILE A 234 ? O ILE A 234 N MET A 242 ? N MET A 242 B 5 6 N CYS A 245 ? N CYS A 245 O ILE A 121 ? O ILE A 121 B 6 7 N ALA A 124 ? N ALA A 124 O GLU A 161 ? O GLU A 161 B 7 8 O VAL A 164 ? O VAL A 164 N THR A 172 ? N THR A 172 C 1 2 O GLN A 215 ? O GLN A 215 N VAL A 187 ? N VAL A 187 C 2 3 N TYR A 188 ? N TYR A 188 O TRP A 181 ? O TRP A 181 C 3 4 N ARG A 182 ? N ARG A 182 O GLU A 231 ? O GLU A 231 C 4 5 O ILE A 234 ? O ILE A 234 N MET A 242 ? N MET A 242 C 5 6 O CYS A 247 ? O CYS A 247 N VAL A 250 ? N VAL A 250 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id DCS _struct_site.pdbx_auth_seq_id 301 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 17 _struct_site.details 'BINDING SITE FOR RESIDUE DCS A 301' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 17 ARG A 45 ? ARG A 45 . ? 1_555 ? 2 AC1 17 TYR A 92 ? TYR A 92 . ? 2_655 ? 3 AC1 17 LYS A 140 ? LYS A 140 . ? 1_555 ? 4 AC1 17 GLN A 147 ? GLN A 147 . ? 1_555 ? 5 AC1 17 GLU A 173 ? GLU A 173 . ? 1_555 ? 6 AC1 17 CYS A 175 ? CYS A 175 . ? 1_555 ? 7 AC1 17 ALA A 176 ? ALA A 176 . ? 1_555 ? 8 AC1 17 ALA A 177 ? ALA A 177 . ? 1_555 ? 9 AC1 17 ASN A 178 ? ASN A 178 . ? 1_555 ? 10 AC1 17 VAL A 197 ? VAL A 197 . ? 1_555 ? 11 AC1 17 GLY A 199 ? GLY A 199 . ? 1_555 ? 12 AC1 17 ILE A 200 ? ILE A 200 . ? 1_555 ? 13 AC1 17 MET A 201 ? MET A 201 . ? 1_555 ? 14 AC1 17 ASN A 236 ? ASN A 236 . ? 1_555 ? 15 AC1 17 ALA A 237 ? ALA A 237 . ? 1_555 ? 16 AC1 17 HOH C . ? HOH A 413 . ? 1_555 ? 17 AC1 17 HOH C . ? HOH A 577 . ? 1_555 ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE A 21 ? ? -141.09 11.33 2 1 GLN A 75 ? ? 73.31 -54.12 3 1 PRO A 110 ? ? -49.11 158.87 4 1 ASN A 118 ? ? -92.69 30.92 5 1 GLU A 119 ? ? -156.27 -14.04 6 1 ASN A 133 ? ? -164.24 93.21 7 1 GLU A 173 ? ? -170.63 -154.16 8 1 ALA A 255 ? ? -151.73 22.95 9 1 PRO A 268 ? ? -68.52 -174.93 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DCS N1 N Y N 88 DCS C2 C Y N 89 DCS C2A C N N 90 DCS C3 C Y N 91 DCS O3 O N N 92 DCS C4 C Y N 93 DCS C4A C N N 94 DCS C5 C Y N 95 DCS C6 C Y N 96 DCS C5A C N N 97 DCS O4P O N N 98 DCS P P N N 99 DCS O1P O N N 100 DCS O2P O N N 101 DCS O3P O N N 102 DCS N N N N 103 DCS CA C N R 104 DCS C C N N 105 DCS O O N N 106 DCS ND N N N 107 DCS OG O N N 108 DCS CB C N N 109 DCS H2A1 H N N 110 DCS H2A2 H N N 111 DCS H2A3 H N N 112 DCS HO3 H N N 113 DCS H4A1 H N N 114 DCS H4A2 H N N 115 DCS H6 H N N 116 DCS H5A1 H N N 117 DCS H5A2 H N N 118 DCS HOP2 H N N 119 DCS HOP3 H N N 120 DCS HN H N N 121 DCS HA H N N 122 DCS HND H N N 123 DCS HB1 H N N 124 DCS HB2 H N N 125 GLN N N N N 126 GLN CA C N S 127 GLN C C N N 128 GLN O O N N 129 GLN CB C N N 130 GLN CG C N N 131 GLN CD C N N 132 GLN OE1 O N N 133 GLN NE2 N N N 134 GLN OXT O N N 135 GLN H H N N 136 GLN H2 H N N 137 GLN HA H N N 138 GLN HB2 H N N 139 GLN HB3 H N N 140 GLN HG2 H N N 141 GLN HG3 H N N 142 GLN HE21 H N N 143 GLN HE22 H N N 144 GLN HXT H N N 145 GLU N N N N 146 GLU CA C N S 147 GLU C C N N 148 GLU O O N N 149 GLU CB C N N 150 GLU CG C N N 151 GLU CD C N N 152 GLU OE1 O N N 153 GLU OE2 O N N 154 GLU OXT O N N 155 GLU H H N N 156 GLU H2 H N N 157 GLU HA H N N 158 GLU HB2 H N N 159 GLU HB3 H N N 160 GLU HG2 H N N 161 GLU HG3 H N N 162 GLU HE2 H N N 163 GLU HXT H N N 164 GLY N N N N 165 GLY CA C N N 166 GLY C C N N 167 GLY O O N N 168 GLY OXT O N N 169 GLY H H N N 170 GLY H2 H N N 171 GLY HA2 H N N 172 GLY HA3 H N N 173 GLY HXT H N N 174 HIS N N N N 175 HIS CA C N S 176 HIS C C N N 177 HIS O O N N 178 HIS CB C N N 179 HIS CG C Y N 180 HIS ND1 N Y N 181 HIS CD2 C Y N 182 HIS CE1 C Y N 183 HIS NE2 N Y N 184 HIS OXT O N N 185 HIS H H N N 186 HIS H2 H N N 187 HIS HA H N N 188 HIS HB2 H N N 189 HIS HB3 H N N 190 HIS HD1 H N N 191 HIS HD2 H N N 192 HIS HE1 H N N 193 HIS HE2 H N N 194 HIS HXT H N N 195 HOH O O N N 196 HOH H1 H N N 197 HOH H2 H N N 198 ILE N N N N 199 ILE CA C N S 200 ILE C C N N 201 ILE O O N N 202 ILE CB C N S 203 ILE CG1 C N N 204 ILE CG2 C N N 205 ILE CD1 C N N 206 ILE OXT O N N 207 ILE H H N N 208 ILE H2 H N N 209 ILE HA H N N 210 ILE HB H N N 211 ILE HG12 H N N 212 ILE HG13 H N N 213 ILE HG21 H N N 214 ILE HG22 H N N 215 ILE HG23 H N N 216 ILE HD11 H N N 217 ILE HD12 H N N 218 ILE HD13 H N N 219 ILE HXT H N N 220 LEU N N N N 221 LEU CA C N S 222 LEU C C N N 223 LEU O O N N 224 LEU CB C N N 225 LEU CG C N N 226 LEU CD1 C N N 227 LEU CD2 C N N 228 LEU OXT O N N 229 LEU H H N N 230 LEU H2 H N N 231 LEU HA H N N 232 LEU HB2 H N N 233 LEU HB3 H N N 234 LEU HG H N N 235 LEU HD11 H N N 236 LEU HD12 H N N 237 LEU HD13 H N N 238 LEU HD21 H N N 239 LEU HD22 H N N 240 LEU HD23 H N N 241 LEU HXT H N N 242 LYS N N N N 243 LYS CA C N S 244 LYS C C N N 245 LYS O O N N 246 LYS CB C N N 247 LYS CG C N N 248 LYS CD C N N 249 LYS CE C N N 250 LYS NZ N N N 251 LYS OXT O N N 252 LYS H H N N 253 LYS H2 H N N 254 LYS HA H N N 255 LYS HB2 H N N 256 LYS HB3 H N N 257 LYS HG2 H N N 258 LYS HG3 H N N 259 LYS HD2 H N N 260 LYS HD3 H N N 261 LYS HE2 H N N 262 LYS HE3 H N N 263 LYS HZ1 H N N 264 LYS HZ2 H N N 265 LYS HZ3 H N N 266 LYS HXT H N N 267 MET N N N N 268 MET CA C N S 269 MET C C N N 270 MET O O N N 271 MET CB C N N 272 MET CG C N N 273 MET SD S N N 274 MET CE C N N 275 MET OXT O N N 276 MET H H N N 277 MET H2 H N N 278 MET HA H N N 279 MET HB2 H N N 280 MET HB3 H N N 281 MET HG2 H N N 282 MET HG3 H N N 283 MET HE1 H N N 284 MET HE2 H N N 285 MET HE3 H N N 286 MET HXT H N N 287 PHE N N N N 288 PHE CA C N S 289 PHE C C N N 290 PHE O O N N 291 PHE CB C N N 292 PHE CG C Y N 293 PHE CD1 C Y N 294 PHE CD2 C Y N 295 PHE CE1 C Y N 296 PHE CE2 C Y N 297 PHE CZ C Y N 298 PHE OXT O N N 299 PHE H H N N 300 PHE H2 H N N 301 PHE HA H N N 302 PHE HB2 H N N 303 PHE HB3 H N N 304 PHE HD1 H N N 305 PHE HD2 H N N 306 PHE HE1 H N N 307 PHE HE2 H N N 308 PHE HZ H N N 309 PHE HXT H N N 310 PRO N N N N 311 PRO CA C N S 312 PRO C C N N 313 PRO O O N N 314 PRO CB C N N 315 PRO CG C N N 316 PRO CD C N N 317 PRO OXT O N N 318 PRO H H N N 319 PRO HA H N N 320 PRO HB2 H N N 321 PRO HB3 H N N 322 PRO HG2 H N N 323 PRO HG3 H N N 324 PRO HD2 H N N 325 PRO HD3 H N N 326 PRO HXT H N N 327 SER N N N N 328 SER CA C N S 329 SER C C N N 330 SER O O N N 331 SER CB C N N 332 SER OG O N N 333 SER OXT O N N 334 SER H H N N 335 SER H2 H N N 336 SER HA H N N 337 SER HB2 H N N 338 SER HB3 H N N 339 SER HG H N N 340 SER HXT H N N 341 THR N N N N 342 THR CA C N S 343 THR C C N N 344 THR O O N N 345 THR CB C N R 346 THR OG1 O N N 347 THR CG2 C N N 348 THR OXT O N N 349 THR H H N N 350 THR H2 H N N 351 THR HA H N N 352 THR HB H N N 353 THR HG1 H N N 354 THR HG21 H N N 355 THR HG22 H N N 356 THR HG23 H N N 357 THR HXT H N N 358 TRP N N N N 359 TRP CA C N S 360 TRP C C N N 361 TRP O O N N 362 TRP CB C N N 363 TRP CG C Y N 364 TRP CD1 C Y N 365 TRP CD2 C Y N 366 TRP NE1 N Y N 367 TRP CE2 C Y N 368 TRP CE3 C Y N 369 TRP CZ2 C Y N 370 TRP CZ3 C Y N 371 TRP CH2 C Y N 372 TRP OXT O N N 373 TRP H H N N 374 TRP H2 H N N 375 TRP HA H N N 376 TRP HB2 H N N 377 TRP HB3 H N N 378 TRP HD1 H N N 379 TRP HE1 H N N 380 TRP HE3 H N N 381 TRP HZ2 H N N 382 TRP HZ3 H N N 383 TRP HH2 H N N 384 TRP HXT H N N 385 TYR N N N N 386 TYR CA C N S 387 TYR C C N N 388 TYR O O N N 389 TYR CB C N N 390 TYR CG C Y N 391 TYR CD1 C Y N 392 TYR CD2 C Y N 393 TYR CE1 C Y N 394 TYR CE2 C Y N 395 TYR CZ C Y N 396 TYR OH O N N 397 TYR OXT O N N 398 TYR H H N N 399 TYR H2 H N N 400 TYR HA H N N 401 TYR HB2 H N N 402 TYR HB3 H N N 403 TYR HD1 H N N 404 TYR HD2 H N N 405 TYR HE1 H N N 406 TYR HE2 H N N 407 TYR HH H N N 408 TYR HXT H N N 409 VAL N N N N 410 VAL CA C N S 411 VAL C C N N 412 VAL O O N N 413 VAL CB C N N 414 VAL CG1 C N N 415 VAL CG2 C N N 416 VAL OXT O N N 417 VAL H H N N 418 VAL H2 H N N 419 VAL HA H N N 420 VAL HB H N N 421 VAL HG11 H N N 422 VAL HG12 H N N 423 VAL HG13 H N N 424 VAL HG21 H N N 425 VAL HG22 H N N 426 VAL HG23 H N N 427 VAL HXT H N N 428 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DCS N1 C2 doub Y N 83 DCS N1 C6 sing Y N 84 DCS C2 C2A sing N N 85 DCS C2 C3 sing Y N 86 DCS C2A H2A1 sing N N 87 DCS C2A H2A2 sing N N 88 DCS C2A H2A3 sing N N 89 DCS C3 O3 sing N N 90 DCS C3 C4 doub Y N 91 DCS O3 HO3 sing N N 92 DCS C4 C4A sing N N 93 DCS C4 C5 sing Y N 94 DCS C4A N sing N N 95 DCS C4A H4A1 sing N N 96 DCS C4A H4A2 sing N N 97 DCS C5 C6 doub Y N 98 DCS C5 C5A sing N N 99 DCS C6 H6 sing N N 100 DCS C5A O4P sing N N 101 DCS C5A H5A1 sing N N 102 DCS C5A H5A2 sing N N 103 DCS O4P P sing N N 104 DCS P O1P doub N N 105 DCS P O2P sing N N 106 DCS P O3P sing N N 107 DCS O2P HOP2 sing N N 108 DCS O3P HOP3 sing N N 109 DCS N CA sing N N 110 DCS N HN sing N N 111 DCS CA C sing N N 112 DCS CA CB sing N N 113 DCS CA HA sing N N 114 DCS C O doub N N 115 DCS C ND sing N N 116 DCS ND OG sing N N 117 DCS ND HND sing N N 118 DCS OG CB sing N N 119 DCS CB HB1 sing N N 120 DCS CB HB2 sing N N 121 GLN N CA sing N N 122 GLN N H sing N N 123 GLN N H2 sing N N 124 GLN CA C sing N N 125 GLN CA CB sing N N 126 GLN CA HA sing N N 127 GLN C O doub N N 128 GLN C OXT sing N N 129 GLN CB CG sing N N 130 GLN CB HB2 sing N N 131 GLN CB HB3 sing N N 132 GLN CG CD sing N N 133 GLN CG HG2 sing N N 134 GLN CG HG3 sing N N 135 GLN CD OE1 doub N N 136 GLN CD NE2 sing N N 137 GLN NE2 HE21 sing N N 138 GLN NE2 HE22 sing N N 139 GLN OXT HXT sing N N 140 GLU N CA sing N N 141 GLU N H sing N N 142 GLU N H2 sing N N 143 GLU CA C sing N N 144 GLU CA CB sing N N 145 GLU CA HA sing N N 146 GLU C O doub N N 147 GLU C OXT sing N N 148 GLU CB CG sing N N 149 GLU CB HB2 sing N N 150 GLU CB HB3 sing N N 151 GLU CG CD sing N N 152 GLU CG HG2 sing N N 153 GLU CG HG3 sing N N 154 GLU CD OE1 doub N N 155 GLU CD OE2 sing N N 156 GLU OE2 HE2 sing N N 157 GLU OXT HXT sing N N 158 GLY N CA sing N N 159 GLY N H sing N N 160 GLY N H2 sing N N 161 GLY CA C sing N N 162 GLY CA HA2 sing N N 163 GLY CA HA3 sing N N 164 GLY C O doub N N 165 GLY C OXT sing N N 166 GLY OXT HXT sing N N 167 HIS N CA sing N N 168 HIS N H sing N N 169 HIS N H2 sing N N 170 HIS CA C sing N N 171 HIS CA CB sing N N 172 HIS CA HA sing N N 173 HIS C O doub N N 174 HIS C OXT sing N N 175 HIS CB CG sing N N 176 HIS CB HB2 sing N N 177 HIS CB HB3 sing N N 178 HIS CG ND1 sing Y N 179 HIS CG CD2 doub Y N 180 HIS ND1 CE1 doub Y N 181 HIS ND1 HD1 sing N N 182 HIS CD2 NE2 sing Y N 183 HIS CD2 HD2 sing N N 184 HIS CE1 NE2 sing Y N 185 HIS CE1 HE1 sing N N 186 HIS NE2 HE2 sing N N 187 HIS OXT HXT sing N N 188 HOH O H1 sing N N 189 HOH O H2 sing N N 190 ILE N CA sing N N 191 ILE N H sing N N 192 ILE N H2 sing N N 193 ILE CA C sing N N 194 ILE CA CB sing N N 195 ILE CA HA sing N N 196 ILE C O doub N N 197 ILE C OXT sing N N 198 ILE CB CG1 sing N N 199 ILE CB CG2 sing N N 200 ILE CB HB sing N N 201 ILE CG1 CD1 sing N N 202 ILE CG1 HG12 sing N N 203 ILE CG1 HG13 sing N N 204 ILE CG2 HG21 sing N N 205 ILE CG2 HG22 sing N N 206 ILE CG2 HG23 sing N N 207 ILE CD1 HD11 sing N N 208 ILE CD1 HD12 sing N N 209 ILE CD1 HD13 sing N N 210 ILE OXT HXT sing N N 211 LEU N CA sing N N 212 LEU N H sing N N 213 LEU N H2 sing N N 214 LEU CA C sing N N 215 LEU CA CB sing N N 216 LEU CA HA sing N N 217 LEU C O doub N N 218 LEU C OXT sing N N 219 LEU CB CG sing N N 220 LEU CB HB2 sing N N 221 LEU CB HB3 sing N N 222 LEU CG CD1 sing N N 223 LEU CG CD2 sing N N 224 LEU CG HG sing N N 225 LEU CD1 HD11 sing N N 226 LEU CD1 HD12 sing N N 227 LEU CD1 HD13 sing N N 228 LEU CD2 HD21 sing N N 229 LEU CD2 HD22 sing N N 230 LEU CD2 HD23 sing N N 231 LEU OXT HXT sing N N 232 LYS N CA sing N N 233 LYS N H sing N N 234 LYS N H2 sing N N 235 LYS CA C sing N N 236 LYS CA CB sing N N 237 LYS CA HA sing N N 238 LYS C O doub N N 239 LYS C OXT sing N N 240 LYS CB CG sing N N 241 LYS CB HB2 sing N N 242 LYS CB HB3 sing N N 243 LYS CG CD sing N N 244 LYS CG HG2 sing N N 245 LYS CG HG3 sing N N 246 LYS CD CE sing N N 247 LYS CD HD2 sing N N 248 LYS CD HD3 sing N N 249 LYS CE NZ sing N N 250 LYS CE HE2 sing N N 251 LYS CE HE3 sing N N 252 LYS NZ HZ1 sing N N 253 LYS NZ HZ2 sing N N 254 LYS NZ HZ3 sing N N 255 LYS OXT HXT sing N N 256 MET N CA sing N N 257 MET N H sing N N 258 MET N H2 sing N N 259 MET CA C sing N N 260 MET CA CB sing N N 261 MET CA HA sing N N 262 MET C O doub N N 263 MET C OXT sing N N 264 MET CB CG sing N N 265 MET CB HB2 sing N N 266 MET CB HB3 sing N N 267 MET CG SD sing N N 268 MET CG HG2 sing N N 269 MET CG HG3 sing N N 270 MET SD CE sing N N 271 MET CE HE1 sing N N 272 MET CE HE2 sing N N 273 MET CE HE3 sing N N 274 MET OXT HXT sing N N 275 PHE N CA sing N N 276 PHE N H sing N N 277 PHE N H2 sing N N 278 PHE CA C sing N N 279 PHE CA CB sing N N 280 PHE CA HA sing N N 281 PHE C O doub N N 282 PHE C OXT sing N N 283 PHE CB CG sing N N 284 PHE CB HB2 sing N N 285 PHE CB HB3 sing N N 286 PHE CG CD1 doub Y N 287 PHE CG CD2 sing Y N 288 PHE CD1 CE1 sing Y N 289 PHE CD1 HD1 sing N N 290 PHE CD2 CE2 doub Y N 291 PHE CD2 HD2 sing N N 292 PHE CE1 CZ doub Y N 293 PHE CE1 HE1 sing N N 294 PHE CE2 CZ sing Y N 295 PHE CE2 HE2 sing N N 296 PHE CZ HZ sing N N 297 PHE OXT HXT sing N N 298 PRO N CA sing N N 299 PRO N CD sing N N 300 PRO N H sing N N 301 PRO CA C sing N N 302 PRO CA CB sing N N 303 PRO CA HA sing N N 304 PRO C O doub N N 305 PRO C OXT sing N N 306 PRO CB CG sing N N 307 PRO CB HB2 sing N N 308 PRO CB HB3 sing N N 309 PRO CG CD sing N N 310 PRO CG HG2 sing N N 311 PRO CG HG3 sing N N 312 PRO CD HD2 sing N N 313 PRO CD HD3 sing N N 314 PRO OXT HXT sing N N 315 SER N CA sing N N 316 SER N H sing N N 317 SER N H2 sing N N 318 SER CA C sing N N 319 SER CA CB sing N N 320 SER CA HA sing N N 321 SER C O doub N N 322 SER C OXT sing N N 323 SER CB OG sing N N 324 SER CB HB2 sing N N 325 SER CB HB3 sing N N 326 SER OG HG sing N N 327 SER OXT HXT sing N N 328 THR N CA sing N N 329 THR N H sing N N 330 THR N H2 sing N N 331 THR CA C sing N N 332 THR CA CB sing N N 333 THR CA HA sing N N 334 THR C O doub N N 335 THR C OXT sing N N 336 THR CB OG1 sing N N 337 THR CB CG2 sing N N 338 THR CB HB sing N N 339 THR OG1 HG1 sing N N 340 THR CG2 HG21 sing N N 341 THR CG2 HG22 sing N N 342 THR CG2 HG23 sing N N 343 THR OXT HXT sing N N 344 TRP N CA sing N N 345 TRP N H sing N N 346 TRP N H2 sing N N 347 TRP CA C sing N N 348 TRP CA CB sing N N 349 TRP CA HA sing N N 350 TRP C O doub N N 351 TRP C OXT sing N N 352 TRP CB CG sing N N 353 TRP CB HB2 sing N N 354 TRP CB HB3 sing N N 355 TRP CG CD1 doub Y N 356 TRP CG CD2 sing Y N 357 TRP CD1 NE1 sing Y N 358 TRP CD1 HD1 sing N N 359 TRP CD2 CE2 doub Y N 360 TRP CD2 CE3 sing Y N 361 TRP NE1 CE2 sing Y N 362 TRP NE1 HE1 sing N N 363 TRP CE2 CZ2 sing Y N 364 TRP CE3 CZ3 doub Y N 365 TRP CE3 HE3 sing N N 366 TRP CZ2 CH2 doub Y N 367 TRP CZ2 HZ2 sing N N 368 TRP CZ3 CH2 sing Y N 369 TRP CZ3 HZ3 sing N N 370 TRP CH2 HH2 sing N N 371 TRP OXT HXT sing N N 372 TYR N CA sing N N 373 TYR N H sing N N 374 TYR N H2 sing N N 375 TYR CA C sing N N 376 TYR CA CB sing N N 377 TYR CA HA sing N N 378 TYR C O doub N N 379 TYR C OXT sing N N 380 TYR CB CG sing N N 381 TYR CB HB2 sing N N 382 TYR CB HB3 sing N N 383 TYR CG CD1 doub Y N 384 TYR CG CD2 sing Y N 385 TYR CD1 CE1 sing Y N 386 TYR CD1 HD1 sing N N 387 TYR CD2 CE2 doub Y N 388 TYR CD2 HD2 sing N N 389 TYR CE1 CZ doub Y N 390 TYR CE1 HE1 sing N N 391 TYR CE2 CZ sing Y N 392 TYR CE2 HE2 sing N N 393 TYR CZ OH sing N N 394 TYR OH HH sing N N 395 TYR OXT HXT sing N N 396 VAL N CA sing N N 397 VAL N H sing N N 398 VAL N H2 sing N N 399 VAL CA C sing N N 400 VAL CA CB sing N N 401 VAL CA HA sing N N 402 VAL C O doub N N 403 VAL C OXT sing N N 404 VAL CB CG1 sing N N 405 VAL CB CG2 sing N N 406 VAL CB HB sing N N 407 VAL CG1 HG11 sing N N 408 VAL CG1 HG12 sing N N 409 VAL CG1 HG13 sing N N 410 VAL CG2 HG21 sing N N 411 VAL CG2 HG22 sing N N 412 VAL CG2 HG23 sing N N 413 VAL OXT HXT sing N N 414 # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type other _pdbx_initial_refinement_model.source_name ? _pdbx_initial_refinement_model.details 'ADC LYASE' # _atom_sites.entry_id 1I2L _atom_sites.fract_transf_matrix[1][1] 0.025320 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013877 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012246 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O P S # loop_