data_1I5D # _entry.id 1I5D # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.376 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1I5D pdb_00001i5d 10.2210/pdb1i5d/pdb RCSB RCSB012924 ? ? WWPDB D_1000012924 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1B3Q _pdbx_database_related.details 'Histidine kinase CheA domains P3-P4-P5' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1I5D _pdbx_database_status.recvd_initial_deposition_date 2001-02-26 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bilwes, A.M.' 1 'Quezada, C.M.' 2 'Croal, L.R.' 3 'Crane, B.R.' 4 'Simon, M.I.' 5 # _citation.id primary _citation.title 'Nucleotide binding by the histidine kinase CheA.' _citation.journal_abbrev Nat.Struct.Biol. _citation.journal_volume 8 _citation.page_first 353 _citation.page_last 360 _citation.year 2001 _citation.journal_id_ASTM NSBIEW _citation.country US _citation.journal_id_ISSN 1072-8368 _citation.journal_id_CSD 2024 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 11276258 _citation.pdbx_database_id_DOI 10.1038/86243 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bilwes, A.M.' 1 ? primary 'Quezada, C.M.' 2 ? primary 'Croal, L.R.' 3 ? primary 'Crane, B.R.' 4 ? primary 'Simon, M.I.' 5 ? # _cell.entry_id 1I5D _cell.length_a 85.190 _cell.length_b 85.190 _cell.length_c 73.770 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1I5D _symmetry.space_group_name_H-M 'P 43 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting tetragonal _symmetry.Int_Tables_number 95 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'CHEMOTAXIS PROTEIN CHEA' 21426.852 1 2.7.3.- ? 'DOMAIN P4' ? 2 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 3 non-polymer syn "SPIRO(2,4,6-TRINITROBENZENE[1,2A]-2O',3O'-METHYLENE-ADENINE-TRIPHOSPHATE" 718.270 1 ? ? ? ? 4 water nat water 18.015 47 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'CHEMOTAXIS SENSOR HISTIDINE KINASE CHEA, CHEA' # _entity_name_sys.entity_id 1 _entity_name_sys.name E.C.2.7.3.- # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;VMKIRMVPISFVFNRFPRMVRDLAKKMNKEVNFIMRGEDTELDRTFVEEIGEPLLHLLRNAIDHGIEPKEERIAKGKPPI GTLILSARHEGNNVVIEVEDDGRGIDKEKIIRKAIEKGLIDESKAATLSDQEILNFLFVPGFSTKEKVSEVSGRGVGMDV VKNVVESLNGSISIESEKDKGTKVTIRLPLT ; _entity_poly.pdbx_seq_one_letter_code_can ;VMKIRMVPISFVFNRFPRMVRDLAKKMNKEVNFIMRGEDTELDRTFVEEIGEPLLHLLRNAIDHGIEPKEERIAKGKPPI GTLILSARHEGNNVVIEVEDDGRGIDKEKIIRKAIEKGLIDESKAATLSDQEILNFLFVPGFSTKEKVSEVSGRGVGMDV VKNVVESLNGSISIESEKDKGTKVTIRLPLT ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 VAL n 1 2 MET n 1 3 LYS n 1 4 ILE n 1 5 ARG n 1 6 MET n 1 7 VAL n 1 8 PRO n 1 9 ILE n 1 10 SER n 1 11 PHE n 1 12 VAL n 1 13 PHE n 1 14 ASN n 1 15 ARG n 1 16 PHE n 1 17 PRO n 1 18 ARG n 1 19 MET n 1 20 VAL n 1 21 ARG n 1 22 ASP n 1 23 LEU n 1 24 ALA n 1 25 LYS n 1 26 LYS n 1 27 MET n 1 28 ASN n 1 29 LYS n 1 30 GLU n 1 31 VAL n 1 32 ASN n 1 33 PHE n 1 34 ILE n 1 35 MET n 1 36 ARG n 1 37 GLY n 1 38 GLU n 1 39 ASP n 1 40 THR n 1 41 GLU n 1 42 LEU n 1 43 ASP n 1 44 ARG n 1 45 THR n 1 46 PHE n 1 47 VAL n 1 48 GLU n 1 49 GLU n 1 50 ILE n 1 51 GLY n 1 52 GLU n 1 53 PRO n 1 54 LEU n 1 55 LEU n 1 56 HIS n 1 57 LEU n 1 58 LEU n 1 59 ARG n 1 60 ASN n 1 61 ALA n 1 62 ILE n 1 63 ASP n 1 64 HIS n 1 65 GLY n 1 66 ILE n 1 67 GLU n 1 68 PRO n 1 69 LYS n 1 70 GLU n 1 71 GLU n 1 72 ARG n 1 73 ILE n 1 74 ALA n 1 75 LYS n 1 76 GLY n 1 77 LYS n 1 78 PRO n 1 79 PRO n 1 80 ILE n 1 81 GLY n 1 82 THR n 1 83 LEU n 1 84 ILE n 1 85 LEU n 1 86 SER n 1 87 ALA n 1 88 ARG n 1 89 HIS n 1 90 GLU n 1 91 GLY n 1 92 ASN n 1 93 ASN n 1 94 VAL n 1 95 VAL n 1 96 ILE n 1 97 GLU n 1 98 VAL n 1 99 GLU n 1 100 ASP n 1 101 ASP n 1 102 GLY n 1 103 ARG n 1 104 GLY n 1 105 ILE n 1 106 ASP n 1 107 LYS n 1 108 GLU n 1 109 LYS n 1 110 ILE n 1 111 ILE n 1 112 ARG n 1 113 LYS n 1 114 ALA n 1 115 ILE n 1 116 GLU n 1 117 LYS n 1 118 GLY n 1 119 LEU n 1 120 ILE n 1 121 ASP n 1 122 GLU n 1 123 SER n 1 124 LYS n 1 125 ALA n 1 126 ALA n 1 127 THR n 1 128 LEU n 1 129 SER n 1 130 ASP n 1 131 GLN n 1 132 GLU n 1 133 ILE n 1 134 LEU n 1 135 ASN n 1 136 PHE n 1 137 LEU n 1 138 PHE n 1 139 VAL n 1 140 PRO n 1 141 GLY n 1 142 PHE n 1 143 SER n 1 144 THR n 1 145 LYS n 1 146 GLU n 1 147 LYS n 1 148 VAL n 1 149 SER n 1 150 GLU n 1 151 VAL n 1 152 SER n 1 153 GLY n 1 154 ARG n 1 155 GLY n 1 156 VAL n 1 157 GLY n 1 158 MET n 1 159 ASP n 1 160 VAL n 1 161 VAL n 1 162 LYS n 1 163 ASN n 1 164 VAL n 1 165 VAL n 1 166 GLU n 1 167 SER n 1 168 LEU n 1 169 ASN n 1 170 GLY n 1 171 SER n 1 172 ILE n 1 173 SER n 1 174 ILE n 1 175 GLU n 1 176 SER n 1 177 GLU n 1 178 LYS n 1 179 ASP n 1 180 LYS n 1 181 GLY n 1 182 THR n 1 183 LYS n 1 184 VAL n 1 185 THR n 1 186 ILE n 1 187 ARG n 1 188 LEU n 1 189 PRO n 1 190 LEU n 1 191 THR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Thermotoga _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Thermotoga maritima' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2336 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PET28A _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name UNP _struct_ref.db_code CHEA_THEMA _struct_ref.pdbx_db_accession Q56310 _struct_ref.pdbx_align_begin 350 _struct_ref.pdbx_seq_one_letter_code ;VMKIRMVPISFVFNRFPRMVRDLAKKMNKEVNFIMRGEDTELDRTFVEEIGEPLLHLLRNAIDHGIEPKEERIAKGKPPI GTLILSARHEGNNVVIEVEDDGRGIDKEKIIRKAIEKGLIDESKAATLSDQEILNFLFVPGFSTKEKVSEVSGRGVGMDV VKNVVESLNGSISIESEKDKGTKVTIRLPLT ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1I5D _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 191 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q56310 _struct_ref_seq.db_align_beg 350 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 540 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 350 _struct_ref_seq.pdbx_auth_seq_align_end 540 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 128 'RNA linking' . "SPIRO(2,4,6-TRINITROBENZENE[1,2A]-2O',3O'-METHYLENE-ADENINE-TRIPHOSPHATE" ? 'C16 H17 N8 O19 P3' 718.270 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1I5D _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.12 _exptl_crystal.density_percent_sol 60.60 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.7 _exptl_crystal_grow.pdbx_details 'sodium acetate 0.1 M Ammonium sulfate 1.9 M, pH 4.7. VAPOR DIFFUSION, HANGING DROP at 298 K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 1999-04-17 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator monochromator _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.08 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRL BEAMLINE BL7-1' _diffrn_source.pdbx_synchrotron_site SSRL _diffrn_source.pdbx_synchrotron_beamline BL7-1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.08 # _reflns.entry_id 1I5D _reflns.observed_criterion_sigma_I 1 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30. _reflns.d_resolution_high 2.90 _reflns.number_obs 7933 _reflns.number_all 7933 _reflns.percent_possible_obs 99 _reflns.pdbx_Rmerge_I_obs 0.0540000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 30 _reflns.B_iso_Wilson_estimate 85.6 _reflns.pdbx_redundancy 1 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _reflns_shell.d_res_high 2.90 _reflns_shell.d_res_low 3.04 _reflns_shell.percent_possible_all 99 _reflns_shell.Rmerge_I_obs 0.2690000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 8 _reflns_shell.pdbx_redundancy 1 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? # _refine.entry_id 1I5D _refine.ls_number_reflns_obs 5811 _refine.ls_number_reflns_all 7933 _refine.pdbx_ls_sigma_I 1.0 _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF 92361613.63 _refine.pdbx_data_cutoff_low_absF 0.00 _refine.ls_d_res_low 27.89 _refine.ls_d_res_high 2.90 _refine.ls_percent_reflns_obs 90.7 _refine.ls_R_factor_obs 0.2630000 _refine.ls_R_factor_all 0.2630000 _refine.ls_R_factor_R_work 0.2630000 _refine.ls_R_factor_R_free 0.3120000 _refine.ls_R_factor_R_free_error 0.018 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.4 _refine.ls_number_reflns_R_free 316 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 89.9 _refine.aniso_B[1][1] 1.19 _refine.aniso_B[2][2] 1.19 _refine.aniso_B[3][3] -2.39 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.337 _refine.solvent_model_param_bsol 103.9 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 1B3Q _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1I5D _refine_analyze.Luzzati_coordinate_error_obs 0.50 _refine_analyze.Luzzati_sigma_a_obs 0.75 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.56 _refine_analyze.Luzzati_sigma_a_free 0.62 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1455 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 56 _refine_hist.number_atoms_solvent 47 _refine_hist.number_atoms_total 1558 _refine_hist.d_res_high 2.90 _refine_hist.d_res_low 27.89 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.013 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 2.0 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 23.8 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 1.29 ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 5.89 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 9.79 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 8.07 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 12.12 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 10 _refine_ls_shell.d_res_high 2.90 _refine_ls_shell.d_res_low 3.00 _refine_ls_shell.number_reflns_R_work 452 _refine_ls_shell.R_factor_R_work 0.4190000 _refine_ls_shell.percent_reflns_obs 74.9 _refine_ls_shell.R_factor_R_free 0.4350000 _refine_ls_shell.R_factor_R_free_error 0.097 _refine_ls_shell.percent_reflns_R_free 4.2 _refine_ls_shell.number_reflns_R_free 20 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 ? WATER.TOP 'X-RAY DIFFRACTION' 3 TNP2.PARAM TNP2.TOP 'X-RAY DIFFRACTION' 4 WATER.PARAM ? 'X-RAY DIFFRACTION' 5 ION.PARAM ? 'X-RAY DIFFRACTION' # _struct.entry_id 1I5D _struct.title 'STRUCTURE OF CHEA DOMAIN P4 IN COMPLEX WITH TNP-ATP' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1I5D _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN, TRANSFERASE' _struct_keywords.text 'beta-alpha sandwich, SIGNALING PROTEIN, TRANSFERASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ILE A 9 ? ASN A 14 ? ILE A 358 ASN A 363 1 ? 6 HELX_P HELX_P2 2 ARG A 15 ? MET A 27 ? ARG A 364 MET A 376 1 ? 13 HELX_P HELX_P3 3 ARG A 44 ? ILE A 50 ? ARG A 393 ILE A 399 1 ? 7 HELX_P HELX_P4 4 ILE A 50 ? HIS A 64 ? ILE A 399 HIS A 413 1 ? 15 HELX_P HELX_P5 5 PRO A 68 ? GLY A 76 ? PRO A 417 GLY A 425 1 ? 9 HELX_P HELX_P6 6 ASP A 106 ? GLU A 116 ? ASP A 455 GLU A 465 1 ? 11 HELX_P HELX_P7 7 SER A 123 ? LEU A 128 ? SER A 472 LEU A 477 5 ? 6 HELX_P HELX_P8 8 SER A 129 ? PHE A 136 ? SER A 478 PHE A 485 1 ? 8 HELX_P HELX_P9 9 LEU A 137 ? VAL A 139 ? LEU A 486 VAL A 488 5 ? 3 HELX_P HELX_P10 10 ASP A 159 ? SER A 167 ? ASP A 508 SER A 516 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 MET A 6 ? PRO A 8 ? MET A 355 PRO A 357 A 2 GLU A 41 ? ASP A 43 ? GLU A 390 ASP A 392 B 1 VAL A 31 ? ARG A 36 ? VAL A 380 ARG A 385 B 2 GLY A 81 ? GLU A 90 ? GLY A 430 GLU A 439 B 3 ASN A 93 ? ASP A 100 ? ASN A 442 ASP A 449 B 4 GLY A 181 ? PRO A 189 ? GLY A 530 PRO A 538 B 5 SER A 171 ? GLU A 177 ? SER A 520 GLU A 526 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O VAL A 7 ? O VAL A 356 N LEU A 42 ? N LEU A 391 B 1 2 N ASN A 32 ? N ASN A 381 O GLY A 81 ? O GLY A 430 B 2 3 N GLU A 90 ? N GLU A 439 O ASN A 93 ? O ASN A 442 B 3 4 N ASP A 100 ? N ASP A 449 O THR A 182 ? O THR A 531 B 4 5 N ARG A 187 ? N ARG A 536 O SER A 171 ? O SER A 520 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SO4 1 ? 5 'BINDING SITE FOR RESIDUE SO4 A 1' AC2 Software A SO4 2 ? 1 'BINDING SITE FOR RESIDUE SO4 A 2' AC3 Software A 128 999 ? 13 'BINDING SITE FOR RESIDUE 128 A 999' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 ARG A 88 ? ARG A 437 . ? 1_555 ? 2 AC1 5 LYS A 107 ? LYS A 456 . ? 6_565 ? 3 AC1 5 GLU A 177 ? GLU A 526 . ? 6_565 ? 4 AC1 5 LYS A 178 ? LYS A 527 . ? 6_565 ? 5 AC1 5 LYS A 183 ? LYS A 532 . ? 1_555 ? 6 AC2 1 ARG A 59 ? ARG A 408 . ? 1_555 ? 7 AC3 13 HOH E . ? HOH A 41 . ? 1_555 ? 8 AC3 13 HOH E . ? HOH A 95 . ? 1_555 ? 9 AC3 13 HOH E . ? HOH A 96 . ? 1_555 ? 10 AC3 13 ASN A 60 ? ASN A 409 . ? 1_555 ? 11 AC3 13 HIS A 64 ? HIS A 413 . ? 1_555 ? 12 AC3 13 GLY A 65 ? GLY A 414 . ? 1_555 ? 13 AC3 13 ASP A 100 ? ASP A 449 . ? 1_555 ? 14 AC3 13 ILE A 105 ? ILE A 454 . ? 1_555 ? 15 AC3 13 LYS A 109 ? LYS A 458 . ? 1_555 ? 16 AC3 13 ILE A 110 ? ILE A 459 . ? 1_555 ? 17 AC3 13 LYS A 113 ? LYS A 462 . ? 1_555 ? 18 AC3 13 SER A 143 ? SER A 492 . ? 1_555 ? 19 AC3 13 LYS A 145 ? LYS A 494 . ? 1_555 ? # _database_PDB_matrix.entry_id 1I5D _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1I5D _atom_sites.fract_transf_matrix[1][1] 0.011738 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011738 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013556 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 VAL 1 350 350 VAL VAL A . n A 1 2 MET 2 351 351 MET MET A . n A 1 3 LYS 3 352 352 LYS LYS A . n A 1 4 ILE 4 353 353 ILE ILE A . n A 1 5 ARG 5 354 354 ARG ARG A . n A 1 6 MET 6 355 355 MET MET A . n A 1 7 VAL 7 356 356 VAL VAL A . n A 1 8 PRO 8 357 357 PRO PRO A . n A 1 9 ILE 9 358 358 ILE ILE A . n A 1 10 SER 10 359 359 SER SER A . n A 1 11 PHE 11 360 360 PHE PHE A . n A 1 12 VAL 12 361 361 VAL VAL A . n A 1 13 PHE 13 362 362 PHE PHE A . n A 1 14 ASN 14 363 363 ASN ASN A . n A 1 15 ARG 15 364 364 ARG ARG A . n A 1 16 PHE 16 365 365 PHE PHE A . n A 1 17 PRO 17 366 366 PRO PRO A . n A 1 18 ARG 18 367 367 ARG ARG A . n A 1 19 MET 19 368 368 MET MET A . n A 1 20 VAL 20 369 369 VAL VAL A . n A 1 21 ARG 21 370 370 ARG ARG A . n A 1 22 ASP 22 371 371 ASP ASP A . n A 1 23 LEU 23 372 372 LEU LEU A . n A 1 24 ALA 24 373 373 ALA ALA A . n A 1 25 LYS 25 374 374 LYS LYS A . n A 1 26 LYS 26 375 375 LYS LYS A . n A 1 27 MET 27 376 376 MET MET A . n A 1 28 ASN 28 377 377 ASN ASN A . n A 1 29 LYS 29 378 378 LYS LYS A . n A 1 30 GLU 30 379 379 GLU GLU A . n A 1 31 VAL 31 380 380 VAL VAL A . n A 1 32 ASN 32 381 381 ASN ASN A . n A 1 33 PHE 33 382 382 PHE PHE A . n A 1 34 ILE 34 383 383 ILE ILE A . n A 1 35 MET 35 384 384 MET MET A . n A 1 36 ARG 36 385 385 ARG ARG A . n A 1 37 GLY 37 386 386 GLY GLY A . n A 1 38 GLU 38 387 387 GLU GLU A . n A 1 39 ASP 39 388 388 ASP ASP A . n A 1 40 THR 40 389 389 THR THR A . n A 1 41 GLU 41 390 390 GLU GLU A . n A 1 42 LEU 42 391 391 LEU LEU A . n A 1 43 ASP 43 392 392 ASP ASP A . n A 1 44 ARG 44 393 393 ARG ARG A . n A 1 45 THR 45 394 394 THR THR A . n A 1 46 PHE 46 395 395 PHE PHE A . n A 1 47 VAL 47 396 396 VAL VAL A . n A 1 48 GLU 48 397 397 GLU GLU A . n A 1 49 GLU 49 398 398 GLU GLU A . n A 1 50 ILE 50 399 399 ILE ILE A . n A 1 51 GLY 51 400 400 GLY GLY A . n A 1 52 GLU 52 401 401 GLU GLU A . n A 1 53 PRO 53 402 402 PRO PRO A . n A 1 54 LEU 54 403 403 LEU LEU A . n A 1 55 LEU 55 404 404 LEU LEU A . n A 1 56 HIS 56 405 405 HIS HIS A . n A 1 57 LEU 57 406 406 LEU LEU A . n A 1 58 LEU 58 407 407 LEU LEU A . n A 1 59 ARG 59 408 408 ARG ARG A . n A 1 60 ASN 60 409 409 ASN ASN A . n A 1 61 ALA 61 410 410 ALA ALA A . n A 1 62 ILE 62 411 411 ILE ILE A . n A 1 63 ASP 63 412 412 ASP ASP A . n A 1 64 HIS 64 413 413 HIS HIS A . n A 1 65 GLY 65 414 414 GLY GLY A . n A 1 66 ILE 66 415 415 ILE ILE A . n A 1 67 GLU 67 416 416 GLU GLU A . n A 1 68 PRO 68 417 417 PRO PRO A . n A 1 69 LYS 69 418 418 LYS LYS A . n A 1 70 GLU 70 419 419 GLU GLU A . n A 1 71 GLU 71 420 420 GLU GLU A . n A 1 72 ARG 72 421 421 ARG ARG A . n A 1 73 ILE 73 422 422 ILE ILE A . n A 1 74 ALA 74 423 423 ALA ALA A . n A 1 75 LYS 75 424 424 LYS LYS A . n A 1 76 GLY 76 425 425 GLY GLY A . n A 1 77 LYS 77 426 426 LYS LYS A . n A 1 78 PRO 78 427 427 PRO PRO A . n A 1 79 PRO 79 428 428 PRO PRO A . n A 1 80 ILE 80 429 429 ILE ILE A . n A 1 81 GLY 81 430 430 GLY GLY A . n A 1 82 THR 82 431 431 THR THR A . n A 1 83 LEU 83 432 432 LEU LEU A . n A 1 84 ILE 84 433 433 ILE ILE A . n A 1 85 LEU 85 434 434 LEU LEU A . n A 1 86 SER 86 435 435 SER SER A . n A 1 87 ALA 87 436 436 ALA ALA A . n A 1 88 ARG 88 437 437 ARG ARG A . n A 1 89 HIS 89 438 438 HIS HIS A . n A 1 90 GLU 90 439 439 GLU GLU A . n A 1 91 GLY 91 440 440 GLY GLY A . n A 1 92 ASN 92 441 441 ASN ASN A . n A 1 93 ASN 93 442 442 ASN ASN A . n A 1 94 VAL 94 443 443 VAL VAL A . n A 1 95 VAL 95 444 444 VAL VAL A . n A 1 96 ILE 96 445 445 ILE ILE A . n A 1 97 GLU 97 446 446 GLU GLU A . n A 1 98 VAL 98 447 447 VAL VAL A . n A 1 99 GLU 99 448 448 GLU GLU A . n A 1 100 ASP 100 449 449 ASP ASP A . n A 1 101 ASP 101 450 450 ASP ASP A . n A 1 102 GLY 102 451 451 GLY GLY A . n A 1 103 ARG 103 452 452 ARG ARG A . n A 1 104 GLY 104 453 453 GLY GLY A . n A 1 105 ILE 105 454 454 ILE ILE A . n A 1 106 ASP 106 455 455 ASP ASP A . n A 1 107 LYS 107 456 456 LYS LYS A . n A 1 108 GLU 108 457 457 GLU GLU A . n A 1 109 LYS 109 458 458 LYS LYS A . n A 1 110 ILE 110 459 459 ILE ILE A . n A 1 111 ILE 111 460 460 ILE ILE A . n A 1 112 ARG 112 461 461 ARG ARG A . n A 1 113 LYS 113 462 462 LYS LYS A . n A 1 114 ALA 114 463 463 ALA ALA A . n A 1 115 ILE 115 464 464 ILE ILE A . n A 1 116 GLU 116 465 465 GLU GLU A . n A 1 117 LYS 117 466 466 LYS LYS A . n A 1 118 GLY 118 467 467 GLY GLY A . n A 1 119 LEU 119 468 468 LEU LEU A . n A 1 120 ILE 120 469 469 ILE ILE A . n A 1 121 ASP 121 470 470 ASP ASP A . n A 1 122 GLU 122 471 471 GLU GLU A . n A 1 123 SER 123 472 472 SER SER A . n A 1 124 LYS 124 473 473 LYS LYS A . n A 1 125 ALA 125 474 474 ALA ALA A . n A 1 126 ALA 126 475 475 ALA ALA A . n A 1 127 THR 127 476 476 THR THR A . n A 1 128 LEU 128 477 477 LEU LEU A . n A 1 129 SER 129 478 478 SER SER A . n A 1 130 ASP 130 479 479 ASP ASP A . n A 1 131 GLN 131 480 480 GLN GLN A . n A 1 132 GLU 132 481 481 GLU GLU A . n A 1 133 ILE 133 482 482 ILE ILE A . n A 1 134 LEU 134 483 483 LEU LEU A . n A 1 135 ASN 135 484 484 ASN ASN A . n A 1 136 PHE 136 485 485 PHE PHE A . n A 1 137 LEU 137 486 486 LEU LEU A . n A 1 138 PHE 138 487 487 PHE PHE A . n A 1 139 VAL 139 488 488 VAL VAL A . n A 1 140 PRO 140 489 489 PRO PRO A . n A 1 141 GLY 141 490 490 GLY GLY A . n A 1 142 PHE 142 491 491 PHE PHE A . n A 1 143 SER 143 492 492 SER SER A . n A 1 144 THR 144 493 493 THR THR A . n A 1 145 LYS 145 494 494 LYS LYS A . n A 1 146 GLU 146 495 495 GLU GLU A . n A 1 147 LYS 147 496 496 LYS LYS A . n A 1 148 VAL 148 497 497 VAL VAL A . n A 1 149 SER 149 498 498 SER SER A . n A 1 150 GLU 150 499 499 GLU GLU A . n A 1 151 VAL 151 500 500 VAL VAL A . n A 1 152 SER 152 501 501 SER SER A . n A 1 153 GLY 153 502 502 GLY GLY A . n A 1 154 ARG 154 503 503 ARG ARG A . n A 1 155 GLY 155 504 504 GLY GLY A . n A 1 156 VAL 156 505 505 VAL VAL A . n A 1 157 GLY 157 506 506 GLY GLY A . n A 1 158 MET 158 507 507 MET MET A . n A 1 159 ASP 159 508 508 ASP ASP A . n A 1 160 VAL 160 509 509 VAL VAL A . n A 1 161 VAL 161 510 510 VAL VAL A . n A 1 162 LYS 162 511 511 LYS LYS A . n A 1 163 ASN 163 512 512 ASN ASN A . n A 1 164 VAL 164 513 513 VAL VAL A . n A 1 165 VAL 165 514 514 VAL VAL A . n A 1 166 GLU 166 515 515 GLU GLU A . n A 1 167 SER 167 516 516 SER SER A . n A 1 168 LEU 168 517 517 LEU LEU A . n A 1 169 ASN 169 518 518 ASN ASN A . n A 1 170 GLY 170 519 519 GLY GLY A . n A 1 171 SER 171 520 520 SER SER A . n A 1 172 ILE 172 521 521 ILE ILE A . n A 1 173 SER 173 522 522 SER SER A . n A 1 174 ILE 174 523 523 ILE ILE A . n A 1 175 GLU 175 524 524 GLU GLU A . n A 1 176 SER 176 525 525 SER SER A . n A 1 177 GLU 177 526 526 GLU GLU A . n A 1 178 LYS 178 527 527 LYS LYS A . n A 1 179 ASP 179 528 528 ASP ASP A . n A 1 180 LYS 180 529 529 LYS LYS A . n A 1 181 GLY 181 530 530 GLY GLY A . n A 1 182 THR 182 531 531 THR THR A . n A 1 183 LYS 183 532 532 LYS LYS A . n A 1 184 VAL 184 533 533 VAL VAL A . n A 1 185 THR 185 534 534 THR THR A . n A 1 186 ILE 186 535 535 ILE ILE A . n A 1 187 ARG 187 536 536 ARG ARG A . n A 1 188 LEU 188 537 537 LEU LEU A . n A 1 189 PRO 189 538 538 PRO PRO A . n A 1 190 LEU 190 539 539 LEU LEU A . n A 1 191 THR 191 540 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 1 1 SO4 SO4 A . C 2 SO4 1 2 2 SO4 SO4 A . D 3 128 1 999 999 128 128 A . E 4 HOH 1 5 5 HOH HOH A . E 4 HOH 2 6 6 HOH HOH A . E 4 HOH 3 7 7 HOH HOH A . E 4 HOH 4 8 8 HOH HOH A . E 4 HOH 5 9 9 HOH HOH A . E 4 HOH 6 10 10 HOH HOH A . E 4 HOH 7 11 11 HOH HOH A . E 4 HOH 8 12 12 HOH HOH A . E 4 HOH 9 13 13 HOH HOH A . E 4 HOH 10 14 14 HOH HOH A . E 4 HOH 11 15 15 HOH HOH A . E 4 HOH 12 16 16 HOH HOH A . E 4 HOH 13 17 17 HOH HOH A . E 4 HOH 14 18 18 HOH HOH A . E 4 HOH 15 19 19 HOH HOH A . E 4 HOH 16 20 20 HOH HOH A . E 4 HOH 17 21 21 HOH HOH A . E 4 HOH 18 22 22 HOH HOH A . E 4 HOH 19 23 23 HOH HOH A . E 4 HOH 20 24 24 HOH HOH A . E 4 HOH 21 25 25 HOH HOH A . E 4 HOH 22 26 26 HOH HOH A . E 4 HOH 23 27 27 HOH HOH A . E 4 HOH 24 29 29 HOH HOH A . E 4 HOH 25 30 30 HOH HOH A . E 4 HOH 26 31 31 HOH HOH A . E 4 HOH 27 32 32 HOH HOH A . E 4 HOH 28 33 33 HOH HOH A . E 4 HOH 29 34 34 HOH HOH A . E 4 HOH 30 35 35 HOH HOH A . E 4 HOH 31 36 36 HOH HOH A . E 4 HOH 32 37 37 HOH HOH A . E 4 HOH 33 38 38 HOH HOH A . E 4 HOH 34 39 39 HOH HOH A . E 4 HOH 35 40 40 HOH HOH A . E 4 HOH 36 41 41 HOH HOH A . E 4 HOH 37 42 42 HOH HOH A . E 4 HOH 38 43 43 HOH HOH A . E 4 HOH 39 44 44 HOH HOH A . E 4 HOH 40 45 45 HOH HOH A . E 4 HOH 41 46 46 HOH HOH A . E 4 HOH 42 47 47 HOH HOH A . E 4 HOH 43 94 94 HOH HOH A . E 4 HOH 44 95 95 HOH HOH A . E 4 HOH 45 96 96 HOH HOH A . E 4 HOH 46 97 97 HOH HOH A . E 4 HOH 47 98 98 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2001-08-26 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2015-09-23 5 'Structure model' 1 4 2023-08-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Non-polymer description' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' 7 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' chem_comp_atom 2 5 'Structure model' chem_comp_bond 3 5 'Structure model' database_2 4 5 'Structure model' pdbx_initial_refinement_model 5 5 'Structure model' pdbx_validate_chiral 6 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 4 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 5 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal AMoRE phasing . ? 1 CNS refinement . ? 2 DENZO 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O2B A 128 999 ? ? O A HOH 95 ? ? 1.99 2 1 OD1 A ASP 450 ? ? O A HOH 13 ? ? 2.13 3 1 O A ILE 469 ? ? O A HOH 34 ? ? 2.15 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 OE1 _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 GLU _pdbx_validate_symm_contact.auth_seq_id_1 439 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 CB _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 GLU _pdbx_validate_symm_contact.auth_seq_id_2 457 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 6_565 _pdbx_validate_symm_contact.dist 2.10 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 N A LYS 418 ? ? CA A LYS 418 ? ? C A LYS 418 ? ? 127.96 111.00 16.96 2.70 N 2 1 N A GLY 467 ? ? CA A GLY 467 ? ? C A GLY 467 ? ? 133.84 113.10 20.74 2.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 352 ? ? -173.64 88.88 2 1 ASN A 363 ? ? -45.82 -8.50 3 1 ASN A 377 ? ? 33.78 73.33 4 1 ASP A 392 ? ? -33.50 134.79 5 1 VAL A 396 ? ? -29.72 -45.84 6 1 PRO A 402 ? ? -44.69 -72.51 7 1 ALA A 436 ? ? -164.51 119.15 8 1 ARG A 437 ? ? -124.74 -161.75 9 1 ASP A 450 ? ? -104.79 40.68 10 1 GLU A 465 ? ? -70.46 20.83 11 1 LYS A 466 ? ? -153.70 -8.18 12 1 ALA A 474 ? ? -16.57 -41.48 13 1 ASN A 484 ? ? -47.07 -16.30 14 1 THR A 493 ? ? -95.05 39.98 15 1 LYS A 496 ? ? -172.46 -50.04 16 1 SER A 498 ? ? -151.97 -39.23 17 1 GLU A 499 ? ? -65.66 7.76 18 1 ARG A 503 ? ? -118.07 -160.47 19 1 MET A 507 ? ? -63.66 5.37 20 1 GLU A 526 ? ? -164.96 109.31 21 1 LYS A 527 ? ? -31.10 125.20 22 1 ASP A 528 ? ? 62.93 -1.01 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A VAL 350 ? CG1 ? A VAL 1 CG1 2 1 Y 1 A VAL 350 ? CG2 ? A VAL 1 CG2 3 1 Y 1 A MET 351 ? CG ? A MET 2 CG 4 1 Y 1 A MET 351 ? SD ? A MET 2 SD 5 1 Y 1 A MET 351 ? CE ? A MET 2 CE 6 1 Y 1 A LYS 352 ? CG ? A LYS 3 CG 7 1 Y 1 A LYS 352 ? CD ? A LYS 3 CD 8 1 Y 1 A LYS 352 ? CE ? A LYS 3 CE 9 1 Y 1 A LYS 352 ? NZ ? A LYS 3 NZ 10 1 Y 1 A ARG 354 ? CG ? A ARG 5 CG 11 1 Y 1 A ARG 354 ? CD ? A ARG 5 CD 12 1 Y 1 A ARG 354 ? NE ? A ARG 5 NE 13 1 Y 1 A ARG 354 ? CZ ? A ARG 5 CZ 14 1 Y 1 A ARG 354 ? NH1 ? A ARG 5 NH1 15 1 Y 1 A ARG 354 ? NH2 ? A ARG 5 NH2 16 1 Y 1 A LYS 374 ? CG ? A LYS 25 CG 17 1 Y 1 A LYS 374 ? CD ? A LYS 25 CD 18 1 Y 1 A LYS 374 ? CE ? A LYS 25 CE 19 1 Y 1 A LYS 374 ? NZ ? A LYS 25 NZ 20 1 Y 1 A GLU 398 ? CG ? A GLU 49 CG 21 1 Y 1 A GLU 398 ? CD ? A GLU 49 CD 22 1 Y 1 A GLU 398 ? OE1 ? A GLU 49 OE1 23 1 Y 1 A GLU 398 ? OE2 ? A GLU 49 OE2 24 1 Y 1 A THR 493 ? OG1 ? A THR 144 OG1 25 1 Y 1 A THR 493 ? CG2 ? A THR 144 CG2 26 1 Y 1 A LYS 496 ? CG ? A LYS 147 CG 27 1 Y 1 A LYS 496 ? CD ? A LYS 147 CD 28 1 Y 1 A LYS 496 ? CE ? A LYS 147 CE 29 1 Y 1 A LYS 496 ? NZ ? A LYS 147 NZ 30 1 Y 1 A ARG 503 ? CG ? A ARG 154 CG 31 1 Y 1 A ARG 503 ? CD ? A ARG 154 CD 32 1 Y 1 A ARG 503 ? NE ? A ARG 154 NE 33 1 Y 1 A ARG 503 ? CZ ? A ARG 154 CZ 34 1 Y 1 A ARG 503 ? NH1 ? A ARG 154 NH1 35 1 Y 1 A ARG 503 ? NH2 ? A ARG 154 NH2 36 1 Y 1 A ASN 512 ? CG ? A ASN 163 CG 37 1 Y 1 A ASN 512 ? OD1 ? A ASN 163 OD1 38 1 Y 1 A ASN 512 ? ND2 ? A ASN 163 ND2 # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id THR _pdbx_unobs_or_zero_occ_residues.auth_seq_id 540 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id THR _pdbx_unobs_or_zero_occ_residues.label_seq_id 191 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 128 PG P N N 1 128 O1G O N N 2 128 O2G O N N 3 128 O3G O N N 4 128 PB P N N 5 128 O1B O N N 6 128 O2B O N N 7 128 O3B O N N 8 128 PA P N N 9 128 O1A O N N 10 128 O2A O N N 11 128 O3A O N N 12 128 "O5'" O N N 13 128 "C5'" C N N 14 128 "C4'" C N R 15 128 "O4'" O N N 16 128 "C3'" C N R 17 128 "O3'" O N N 18 128 "C2'" C N R 19 128 "O2'" O N N 20 128 "C1'" C N R 21 128 N9 N Y N 22 128 C8 C Y N 23 128 N7 N Y N 24 128 C5 C Y N 25 128 C6 C Y N 26 128 N6 N N N 27 128 N1 N Y N 28 128 C2 C Y N 29 128 N3 N Y N 30 128 C4 C Y N 31 128 C1F C N N 32 128 C2F C N N 33 128 C3F C N N 34 128 C4F C N N 35 128 C5F C N N 36 128 C6F C N N 37 128 N2F N N N 38 128 N4F N N N 39 128 N6F N N N 40 128 O2F O N N 41 128 O3F O N N 42 128 O4F O N N 43 128 O5F O N N 44 128 O6F O N N 45 128 O7F O N N 46 128 HOG2 H N N 47 128 HOG3 H N N 48 128 HOB2 H N N 49 128 HOA2 H N N 50 128 "H5'" H N N 51 128 "H5''" H N N 52 128 "H4'" H N N 53 128 "H3'" H N N 54 128 "H2'" H N N 55 128 "H1'" H N N 56 128 H8 H N N 57 128 HN61 H N N 58 128 HN62 H N N 59 128 H2 H N N 60 128 H3F H N N 61 128 H4F H N N 62 128 H5F H N N 63 ALA N N N N 64 ALA CA C N S 65 ALA C C N N 66 ALA O O N N 67 ALA CB C N N 68 ALA OXT O N N 69 ALA H H N N 70 ALA H2 H N N 71 ALA HA H N N 72 ALA HB1 H N N 73 ALA HB2 H N N 74 ALA HB3 H N N 75 ALA HXT H N N 76 ARG N N N N 77 ARG CA C N S 78 ARG C C N N 79 ARG O O N N 80 ARG CB C N N 81 ARG CG C N N 82 ARG CD C N N 83 ARG NE N N N 84 ARG CZ C N N 85 ARG NH1 N N N 86 ARG NH2 N N N 87 ARG OXT O N N 88 ARG H H N N 89 ARG H2 H N N 90 ARG HA H N N 91 ARG HB2 H N N 92 ARG HB3 H N N 93 ARG HG2 H N N 94 ARG HG3 H N N 95 ARG HD2 H N N 96 ARG HD3 H N N 97 ARG HE H N N 98 ARG HH11 H N N 99 ARG HH12 H N N 100 ARG HH21 H N N 101 ARG HH22 H N N 102 ARG HXT H N N 103 ASN N N N N 104 ASN CA C N S 105 ASN C C N N 106 ASN O O N N 107 ASN CB C N N 108 ASN CG C N N 109 ASN OD1 O N N 110 ASN ND2 N N N 111 ASN OXT O N N 112 ASN H H N N 113 ASN H2 H N N 114 ASN HA H N N 115 ASN HB2 H N N 116 ASN HB3 H N N 117 ASN HD21 H N N 118 ASN HD22 H N N 119 ASN HXT H N N 120 ASP N N N N 121 ASP CA C N S 122 ASP C C N N 123 ASP O O N N 124 ASP CB C N N 125 ASP CG C N N 126 ASP OD1 O N N 127 ASP OD2 O N N 128 ASP OXT O N N 129 ASP H H N N 130 ASP H2 H N N 131 ASP HA H N N 132 ASP HB2 H N N 133 ASP HB3 H N N 134 ASP HD2 H N N 135 ASP HXT H N N 136 GLN N N N N 137 GLN CA C N S 138 GLN C C N N 139 GLN O O N N 140 GLN CB C N N 141 GLN CG C N N 142 GLN CD C N N 143 GLN OE1 O N N 144 GLN NE2 N N N 145 GLN OXT O N N 146 GLN H H N N 147 GLN H2 H N N 148 GLN HA H N N 149 GLN HB2 H N N 150 GLN HB3 H N N 151 GLN HG2 H N N 152 GLN HG3 H N N 153 GLN HE21 H N N 154 GLN HE22 H N N 155 GLN HXT H N N 156 GLU N N N N 157 GLU CA C N S 158 GLU C C N N 159 GLU O O N N 160 GLU CB C N N 161 GLU CG C N N 162 GLU CD C N N 163 GLU OE1 O N N 164 GLU OE2 O N N 165 GLU OXT O N N 166 GLU H H N N 167 GLU H2 H N N 168 GLU HA H N N 169 GLU HB2 H N N 170 GLU HB3 H N N 171 GLU HG2 H N N 172 GLU HG3 H N N 173 GLU HE2 H N N 174 GLU HXT H N N 175 GLY N N N N 176 GLY CA C N N 177 GLY C C N N 178 GLY O O N N 179 GLY OXT O N N 180 GLY H H N N 181 GLY H2 H N N 182 GLY HA2 H N N 183 GLY HA3 H N N 184 GLY HXT H N N 185 HIS N N N N 186 HIS CA C N S 187 HIS C C N N 188 HIS O O N N 189 HIS CB C N N 190 HIS CG C Y N 191 HIS ND1 N Y N 192 HIS CD2 C Y N 193 HIS CE1 C Y N 194 HIS NE2 N Y N 195 HIS OXT O N N 196 HIS H H N N 197 HIS H2 H N N 198 HIS HA H N N 199 HIS HB2 H N N 200 HIS HB3 H N N 201 HIS HD1 H N N 202 HIS HD2 H N N 203 HIS HE1 H N N 204 HIS HE2 H N N 205 HIS HXT H N N 206 HOH O O N N 207 HOH H1 H N N 208 HOH H2 H N N 209 ILE N N N N 210 ILE CA C N S 211 ILE C C N N 212 ILE O O N N 213 ILE CB C N S 214 ILE CG1 C N N 215 ILE CG2 C N N 216 ILE CD1 C N N 217 ILE OXT O N N 218 ILE H H N N 219 ILE H2 H N N 220 ILE HA H N N 221 ILE HB H N N 222 ILE HG12 H N N 223 ILE HG13 H N N 224 ILE HG21 H N N 225 ILE HG22 H N N 226 ILE HG23 H N N 227 ILE HD11 H N N 228 ILE HD12 H N N 229 ILE HD13 H N N 230 ILE HXT H N N 231 LEU N N N N 232 LEU CA C N S 233 LEU C C N N 234 LEU O O N N 235 LEU CB C N N 236 LEU CG C N N 237 LEU CD1 C N N 238 LEU CD2 C N N 239 LEU OXT O N N 240 LEU H H N N 241 LEU H2 H N N 242 LEU HA H N N 243 LEU HB2 H N N 244 LEU HB3 H N N 245 LEU HG H N N 246 LEU HD11 H N N 247 LEU HD12 H N N 248 LEU HD13 H N N 249 LEU HD21 H N N 250 LEU HD22 H N N 251 LEU HD23 H N N 252 LEU HXT H N N 253 LYS N N N N 254 LYS CA C N S 255 LYS C C N N 256 LYS O O N N 257 LYS CB C N N 258 LYS CG C N N 259 LYS CD C N N 260 LYS CE C N N 261 LYS NZ N N N 262 LYS OXT O N N 263 LYS H H N N 264 LYS H2 H N N 265 LYS HA H N N 266 LYS HB2 H N N 267 LYS HB3 H N N 268 LYS HG2 H N N 269 LYS HG3 H N N 270 LYS HD2 H N N 271 LYS HD3 H N N 272 LYS HE2 H N N 273 LYS HE3 H N N 274 LYS HZ1 H N N 275 LYS HZ2 H N N 276 LYS HZ3 H N N 277 LYS HXT H N N 278 MET N N N N 279 MET CA C N S 280 MET C C N N 281 MET O O N N 282 MET CB C N N 283 MET CG C N N 284 MET SD S N N 285 MET CE C N N 286 MET OXT O N N 287 MET H H N N 288 MET H2 H N N 289 MET HA H N N 290 MET HB2 H N N 291 MET HB3 H N N 292 MET HG2 H N N 293 MET HG3 H N N 294 MET HE1 H N N 295 MET HE2 H N N 296 MET HE3 H N N 297 MET HXT H N N 298 PHE N N N N 299 PHE CA C N S 300 PHE C C N N 301 PHE O O N N 302 PHE CB C N N 303 PHE CG C Y N 304 PHE CD1 C Y N 305 PHE CD2 C Y N 306 PHE CE1 C Y N 307 PHE CE2 C Y N 308 PHE CZ C Y N 309 PHE OXT O N N 310 PHE H H N N 311 PHE H2 H N N 312 PHE HA H N N 313 PHE HB2 H N N 314 PHE HB3 H N N 315 PHE HD1 H N N 316 PHE HD2 H N N 317 PHE HE1 H N N 318 PHE HE2 H N N 319 PHE HZ H N N 320 PHE HXT H N N 321 PRO N N N N 322 PRO CA C N S 323 PRO C C N N 324 PRO O O N N 325 PRO CB C N N 326 PRO CG C N N 327 PRO CD C N N 328 PRO OXT O N N 329 PRO H H N N 330 PRO HA H N N 331 PRO HB2 H N N 332 PRO HB3 H N N 333 PRO HG2 H N N 334 PRO HG3 H N N 335 PRO HD2 H N N 336 PRO HD3 H N N 337 PRO HXT H N N 338 SER N N N N 339 SER CA C N S 340 SER C C N N 341 SER O O N N 342 SER CB C N N 343 SER OG O N N 344 SER OXT O N N 345 SER H H N N 346 SER H2 H N N 347 SER HA H N N 348 SER HB2 H N N 349 SER HB3 H N N 350 SER HG H N N 351 SER HXT H N N 352 SO4 S S N N 353 SO4 O1 O N N 354 SO4 O2 O N N 355 SO4 O3 O N N 356 SO4 O4 O N N 357 THR N N N N 358 THR CA C N S 359 THR C C N N 360 THR O O N N 361 THR CB C N R 362 THR OG1 O N N 363 THR CG2 C N N 364 THR OXT O N N 365 THR H H N N 366 THR H2 H N N 367 THR HA H N N 368 THR HB H N N 369 THR HG1 H N N 370 THR HG21 H N N 371 THR HG22 H N N 372 THR HG23 H N N 373 THR HXT H N N 374 VAL N N N N 375 VAL CA C N S 376 VAL C C N N 377 VAL O O N N 378 VAL CB C N N 379 VAL CG1 C N N 380 VAL CG2 C N N 381 VAL OXT O N N 382 VAL H H N N 383 VAL H2 H N N 384 VAL HA H N N 385 VAL HB H N N 386 VAL HG11 H N N 387 VAL HG12 H N N 388 VAL HG13 H N N 389 VAL HG21 H N N 390 VAL HG22 H N N 391 VAL HG23 H N N 392 VAL HXT H N N 393 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 128 PG O1G doub N N 1 128 PG O2G sing N N 2 128 PG O3G sing N N 3 128 PG O3B sing N N 4 128 O2G HOG2 sing N N 5 128 O3G HOG3 sing N N 6 128 PB O1B doub N N 7 128 PB O2B sing N N 8 128 PB O3B sing N N 9 128 PB O3A sing N N 10 128 O2B HOB2 sing N N 11 128 PA O1A doub N N 12 128 PA O2A sing N N 13 128 PA O3A sing N N 14 128 PA "O5'" sing N N 15 128 O2A HOA2 sing N N 16 128 "O5'" "C5'" sing N N 17 128 "C5'" "C4'" sing N N 18 128 "C5'" "H5'" sing N N 19 128 "C5'" "H5''" sing N N 20 128 "C4'" "O4'" sing N N 21 128 "C4'" "C3'" sing N N 22 128 "C4'" "H4'" sing N N 23 128 "O4'" "C1'" sing N N 24 128 "C3'" "O3'" sing N N 25 128 "C3'" "C2'" sing N N 26 128 "C3'" "H3'" sing N N 27 128 "O3'" C1F sing N N 28 128 "C2'" "O2'" sing N N 29 128 "C2'" "C1'" sing N N 30 128 "C2'" "H2'" sing N N 31 128 "O2'" C1F sing N N 32 128 "C1'" N9 sing N N 33 128 "C1'" "H1'" sing N N 34 128 N9 C8 sing Y N 35 128 N9 C4 sing Y N 36 128 C8 N7 doub Y N 37 128 C8 H8 sing N N 38 128 N7 C5 sing Y N 39 128 C5 C6 sing Y N 40 128 C5 C4 doub Y N 41 128 C6 N6 sing N N 42 128 C6 N1 doub Y N 43 128 N6 HN61 sing N N 44 128 N6 HN62 sing N N 45 128 N1 C2 sing Y N 46 128 C2 N3 doub Y N 47 128 C2 H2 sing N N 48 128 N3 C4 sing Y N 49 128 C1F C2F sing N N 50 128 C1F C6F sing N N 51 128 C2F C3F doub N N 52 128 C2F N2F sing N N 53 128 C3F C4F sing N N 54 128 C3F H3F sing N N 55 128 C4F C5F sing N N 56 128 C4F N4F doub N N 57 128 O4F H4F sing N N 58 128 C5F C6F doub N N 59 128 C5F H5F sing N N 60 128 C6F N6F sing N N 61 128 N2F O2F doub N N 62 128 N2F O3F sing N N 63 128 N4F O4F sing N N 64 128 N4F O5F sing N N 65 128 N6F O6F doub N N 66 128 N6F O7F sing N N 67 ALA N CA sing N N 68 ALA N H sing N N 69 ALA N H2 sing N N 70 ALA CA C sing N N 71 ALA CA CB sing N N 72 ALA CA HA sing N N 73 ALA C O doub N N 74 ALA C OXT sing N N 75 ALA CB HB1 sing N N 76 ALA CB HB2 sing N N 77 ALA CB HB3 sing N N 78 ALA OXT HXT sing N N 79 ARG N CA sing N N 80 ARG N H sing N N 81 ARG N H2 sing N N 82 ARG CA C sing N N 83 ARG CA CB sing N N 84 ARG CA HA sing N N 85 ARG C O doub N N 86 ARG C OXT sing N N 87 ARG CB CG sing N N 88 ARG CB HB2 sing N N 89 ARG CB HB3 sing N N 90 ARG CG CD sing N N 91 ARG CG HG2 sing N N 92 ARG CG HG3 sing N N 93 ARG CD NE sing N N 94 ARG CD HD2 sing N N 95 ARG CD HD3 sing N N 96 ARG NE CZ sing N N 97 ARG NE HE sing N N 98 ARG CZ NH1 sing N N 99 ARG CZ NH2 doub N N 100 ARG NH1 HH11 sing N N 101 ARG NH1 HH12 sing N N 102 ARG NH2 HH21 sing N N 103 ARG NH2 HH22 sing N N 104 ARG OXT HXT sing N N 105 ASN N CA sing N N 106 ASN N H sing N N 107 ASN N H2 sing N N 108 ASN CA C sing N N 109 ASN CA CB sing N N 110 ASN CA HA sing N N 111 ASN C O doub N N 112 ASN C OXT sing N N 113 ASN CB CG sing N N 114 ASN CB HB2 sing N N 115 ASN CB HB3 sing N N 116 ASN CG OD1 doub N N 117 ASN CG ND2 sing N N 118 ASN ND2 HD21 sing N N 119 ASN ND2 HD22 sing N N 120 ASN OXT HXT sing N N 121 ASP N CA sing N N 122 ASP N H sing N N 123 ASP N H2 sing N N 124 ASP CA C sing N N 125 ASP CA CB sing N N 126 ASP CA HA sing N N 127 ASP C O doub N N 128 ASP C OXT sing N N 129 ASP CB CG sing N N 130 ASP CB HB2 sing N N 131 ASP CB HB3 sing N N 132 ASP CG OD1 doub N N 133 ASP CG OD2 sing N N 134 ASP OD2 HD2 sing N N 135 ASP OXT HXT sing N N 136 GLN N CA sing N N 137 GLN N H sing N N 138 GLN N H2 sing N N 139 GLN CA C sing N N 140 GLN CA CB sing N N 141 GLN CA HA sing N N 142 GLN C O doub N N 143 GLN C OXT sing N N 144 GLN CB CG sing N N 145 GLN CB HB2 sing N N 146 GLN CB HB3 sing N N 147 GLN CG CD sing N N 148 GLN CG HG2 sing N N 149 GLN CG HG3 sing N N 150 GLN CD OE1 doub N N 151 GLN CD NE2 sing N N 152 GLN NE2 HE21 sing N N 153 GLN NE2 HE22 sing N N 154 GLN OXT HXT sing N N 155 GLU N CA sing N N 156 GLU N H sing N N 157 GLU N H2 sing N N 158 GLU CA C sing N N 159 GLU CA CB sing N N 160 GLU CA HA sing N N 161 GLU C O doub N N 162 GLU C OXT sing N N 163 GLU CB CG sing N N 164 GLU CB HB2 sing N N 165 GLU CB HB3 sing N N 166 GLU CG CD sing N N 167 GLU CG HG2 sing N N 168 GLU CG HG3 sing N N 169 GLU CD OE1 doub N N 170 GLU CD OE2 sing N N 171 GLU OE2 HE2 sing N N 172 GLU OXT HXT sing N N 173 GLY N CA sing N N 174 GLY N H sing N N 175 GLY N H2 sing N N 176 GLY CA C sing N N 177 GLY CA HA2 sing N N 178 GLY CA HA3 sing N N 179 GLY C O doub N N 180 GLY C OXT sing N N 181 GLY OXT HXT sing N N 182 HIS N CA sing N N 183 HIS N H sing N N 184 HIS N H2 sing N N 185 HIS CA C sing N N 186 HIS CA CB sing N N 187 HIS CA HA sing N N 188 HIS C O doub N N 189 HIS C OXT sing N N 190 HIS CB CG sing N N 191 HIS CB HB2 sing N N 192 HIS CB HB3 sing N N 193 HIS CG ND1 sing Y N 194 HIS CG CD2 doub Y N 195 HIS ND1 CE1 doub Y N 196 HIS ND1 HD1 sing N N 197 HIS CD2 NE2 sing Y N 198 HIS CD2 HD2 sing N N 199 HIS CE1 NE2 sing Y N 200 HIS CE1 HE1 sing N N 201 HIS NE2 HE2 sing N N 202 HIS OXT HXT sing N N 203 HOH O H1 sing N N 204 HOH O H2 sing N N 205 ILE N CA sing N N 206 ILE N H sing N N 207 ILE N H2 sing N N 208 ILE CA C sing N N 209 ILE CA CB sing N N 210 ILE CA HA sing N N 211 ILE C O doub N N 212 ILE C OXT sing N N 213 ILE CB CG1 sing N N 214 ILE CB CG2 sing N N 215 ILE CB HB sing N N 216 ILE CG1 CD1 sing N N 217 ILE CG1 HG12 sing N N 218 ILE CG1 HG13 sing N N 219 ILE CG2 HG21 sing N N 220 ILE CG2 HG22 sing N N 221 ILE CG2 HG23 sing N N 222 ILE CD1 HD11 sing N N 223 ILE CD1 HD12 sing N N 224 ILE CD1 HD13 sing N N 225 ILE OXT HXT sing N N 226 LEU N CA sing N N 227 LEU N H sing N N 228 LEU N H2 sing N N 229 LEU CA C sing N N 230 LEU CA CB sing N N 231 LEU CA HA sing N N 232 LEU C O doub N N 233 LEU C OXT sing N N 234 LEU CB CG sing N N 235 LEU CB HB2 sing N N 236 LEU CB HB3 sing N N 237 LEU CG CD1 sing N N 238 LEU CG CD2 sing N N 239 LEU CG HG sing N N 240 LEU CD1 HD11 sing N N 241 LEU CD1 HD12 sing N N 242 LEU CD1 HD13 sing N N 243 LEU CD2 HD21 sing N N 244 LEU CD2 HD22 sing N N 245 LEU CD2 HD23 sing N N 246 LEU OXT HXT sing N N 247 LYS N CA sing N N 248 LYS N H sing N N 249 LYS N H2 sing N N 250 LYS CA C sing N N 251 LYS CA CB sing N N 252 LYS CA HA sing N N 253 LYS C O doub N N 254 LYS C OXT sing N N 255 LYS CB CG sing N N 256 LYS CB HB2 sing N N 257 LYS CB HB3 sing N N 258 LYS CG CD sing N N 259 LYS CG HG2 sing N N 260 LYS CG HG3 sing N N 261 LYS CD CE sing N N 262 LYS CD HD2 sing N N 263 LYS CD HD3 sing N N 264 LYS CE NZ sing N N 265 LYS CE HE2 sing N N 266 LYS CE HE3 sing N N 267 LYS NZ HZ1 sing N N 268 LYS NZ HZ2 sing N N 269 LYS NZ HZ3 sing N N 270 LYS OXT HXT sing N N 271 MET N CA sing N N 272 MET N H sing N N 273 MET N H2 sing N N 274 MET CA C sing N N 275 MET CA CB sing N N 276 MET CA HA sing N N 277 MET C O doub N N 278 MET C OXT sing N N 279 MET CB CG sing N N 280 MET CB HB2 sing N N 281 MET CB HB3 sing N N 282 MET CG SD sing N N 283 MET CG HG2 sing N N 284 MET CG HG3 sing N N 285 MET SD CE sing N N 286 MET CE HE1 sing N N 287 MET CE HE2 sing N N 288 MET CE HE3 sing N N 289 MET OXT HXT sing N N 290 PHE N CA sing N N 291 PHE N H sing N N 292 PHE N H2 sing N N 293 PHE CA C sing N N 294 PHE CA CB sing N N 295 PHE CA HA sing N N 296 PHE C O doub N N 297 PHE C OXT sing N N 298 PHE CB CG sing N N 299 PHE CB HB2 sing N N 300 PHE CB HB3 sing N N 301 PHE CG CD1 doub Y N 302 PHE CG CD2 sing Y N 303 PHE CD1 CE1 sing Y N 304 PHE CD1 HD1 sing N N 305 PHE CD2 CE2 doub Y N 306 PHE CD2 HD2 sing N N 307 PHE CE1 CZ doub Y N 308 PHE CE1 HE1 sing N N 309 PHE CE2 CZ sing Y N 310 PHE CE2 HE2 sing N N 311 PHE CZ HZ sing N N 312 PHE OXT HXT sing N N 313 PRO N CA sing N N 314 PRO N CD sing N N 315 PRO N H sing N N 316 PRO CA C sing N N 317 PRO CA CB sing N N 318 PRO CA HA sing N N 319 PRO C O doub N N 320 PRO C OXT sing N N 321 PRO CB CG sing N N 322 PRO CB HB2 sing N N 323 PRO CB HB3 sing N N 324 PRO CG CD sing N N 325 PRO CG HG2 sing N N 326 PRO CG HG3 sing N N 327 PRO CD HD2 sing N N 328 PRO CD HD3 sing N N 329 PRO OXT HXT sing N N 330 SER N CA sing N N 331 SER N H sing N N 332 SER N H2 sing N N 333 SER CA C sing N N 334 SER CA CB sing N N 335 SER CA HA sing N N 336 SER C O doub N N 337 SER C OXT sing N N 338 SER CB OG sing N N 339 SER CB HB2 sing N N 340 SER CB HB3 sing N N 341 SER OG HG sing N N 342 SER OXT HXT sing N N 343 SO4 S O1 doub N N 344 SO4 S O2 doub N N 345 SO4 S O3 sing N N 346 SO4 S O4 sing N N 347 THR N CA sing N N 348 THR N H sing N N 349 THR N H2 sing N N 350 THR CA C sing N N 351 THR CA CB sing N N 352 THR CA HA sing N N 353 THR C O doub N N 354 THR C OXT sing N N 355 THR CB OG1 sing N N 356 THR CB CG2 sing N N 357 THR CB HB sing N N 358 THR OG1 HG1 sing N N 359 THR CG2 HG21 sing N N 360 THR CG2 HG22 sing N N 361 THR CG2 HG23 sing N N 362 THR OXT HXT sing N N 363 VAL N CA sing N N 364 VAL N H sing N N 365 VAL N H2 sing N N 366 VAL CA C sing N N 367 VAL CA CB sing N N 368 VAL CA HA sing N N 369 VAL C O doub N N 370 VAL C OXT sing N N 371 VAL CB CG1 sing N N 372 VAL CB CG2 sing N N 373 VAL CB HB sing N N 374 VAL CG1 HG11 sing N N 375 VAL CG1 HG12 sing N N 376 VAL CG1 HG13 sing N N 377 VAL CG2 HG21 sing N N 378 VAL CG2 HG22 sing N N 379 VAL CG2 HG23 sing N N 380 VAL OXT HXT sing N N 381 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 "SPIRO(2,4,6-TRINITROBENZENE[1,2A]-2O',3O'-METHYLENE-ADENINE-TRIPHOSPHATE" 128 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1B3Q _pdbx_initial_refinement_model.details ? #