data_1I5V # _entry.id 1I5V # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.355 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1I5V pdb_00001i5v 10.2210/pdb1i5v/pdb RCSB RCSB012942 ? ? WWPDB D_1000012942 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1I5V _pdbx_database_status.recvd_initial_deposition_date 2001-03-01 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Favier, A.' 1 'Blackledge, M.' 2 'Simorre, J.P.' 3 'Marion, D.' 4 'Debousy, J.C.' 5 # _citation.id primary _citation.title 'Solution structure of 2-(pyrido[1,2-e]purin-4-yl)amino-ethanol intercalated in the DNA duplex d(CGATCG)2.' _citation.journal_abbrev Biochemistry _citation.journal_volume 40 _citation.page_first 8717 _citation.page_last 8726 _citation.year 2001 _citation.journal_id_ASTM BICHAW _citation.country US _citation.journal_id_ISSN 0006-2960 _citation.journal_id_CSD 0033 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 11467931 _citation.pdbx_database_id_DOI 10.1021/bi0024963 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Favier, A.' 1 ? primary 'Blackledge, M.' 2 ? primary 'Simorre, J.P.' 3 ? primary 'Crouzy, S.' 4 ? primary 'Dabouis, V.' 5 ? primary 'Gueiffier, A.' 6 ? primary 'Marion, D.' 7 ? primary 'Debouzy, J.C.' 8 ? # _cell.entry_id 1I5V _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1I5V _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*CP*GP*AP*TP*CP*G)-3'" 1809.217 2 ? ? ? ? 2 non-polymer syn '2-(PYRIDO[1,2-E]PURIN-4-YL)AMINO-ETHANOL' 229.238 2 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DC)(DG)(DA)(DT)(DC)(DG)' _entity_poly.pdbx_seq_one_letter_code_can CGATCG _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DG n 1 3 DA n 1 4 DT n 1 5 DC n 1 6 DG n # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 1I5V _struct_ref.pdbx_db_accession 1I5V _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1I5V A 1 ? 6 ? 1I5V 1 ? 6 ? 1 6 2 1 1I5V B 1 ? 6 ? 1I5V 1 ? 6 ? 1 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 PPZ non-polymer . '2-(PYRIDO[1,2-E]PURIN-4-YL)AMINO-ETHANOL' ? 'C11 H11 N5 O' 229.238 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type 1 1 1 '2D NOESY' 2 2 1 '2D NOESY' 3 1 2 DQF-COSY 4 1 2 TOCSY 5 1 2 '1H-1H CT COSY' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 7 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system 1 '2 mM 2-(pyrido[1,2-e]purin-4-yl)amino-ethanol, 2mM d(CGATCG)2 160 mM KCl, 0.15 mM EDTA, 20 mM sodium phosphate' '90% H2O/10% D2O' 2 '2 mM 2-(pyrido[1,2-e]purin-4-yl)amino-ethanol, 2mM d(CGATCG)2 160 mM KCl, 0.15 mM EDTA, 20 mM sodium phosphate' '100% D2O' # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.field_strength 1 ? Varian INOVA 800 2 ? Bruker AMX 600 3 ? Bruker AMX 400 # _pdbx_nmr_refine.entry_id 1I5V _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details 'calculation from randomized cartesian coordinates' _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_details.entry_id 1I5V _pdbx_nmr_details.text 'This structure was determined using standard 2D homonuclear techniques.' # _pdbx_nmr_ensemble.entry_id 1I5V _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 22 _pdbx_nmr_ensemble.conformer_selection_criteria 'The submitted conformer models are the 22 structures with the lowest experimental energy' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1I5V _pdbx_nmr_representative.conformer_id 12 _pdbx_nmr_representative.selection_criteria 'closest to the average' # loop_ _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.classification _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal VNMR 6.A collection ? 1 Felix ? processing ? 2 Insight 97 'data analysis' ? 3 Discover ? 'structure solution' ? 4 Discover ? refinement ? 5 # _exptl.entry_id 1I5V _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 1I5V _struct.title 'SOLUTION STRUCTURE OF 2-(PYRIDO[1,2-E]PURIN-4-YL)AMINO-ETHANOL INTERCALATED IN THE DNA DUPLEX D(CGATCG)2' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1I5V _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'DRUG-DNA COMPLEX, DOUBLE HELIX, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DG 2 N1 ? ? ? 1_555 B DC 5 N3 ? ? A DG 2 B DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 2 N2 ? ? ? 1_555 B DC 5 O2 ? ? A DG 2 B DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B DC 5 N4 ? ? A DG 2 B DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DA 3 N1 ? ? ? 1_555 B DT 4 N3 ? ? A DA 3 B DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DA 3 N6 ? ? ? 1_555 B DT 4 O4 ? ? A DA 3 B DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DT 4 N3 ? ? ? 1_555 B DA 3 N1 ? ? A DT 4 B DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DT 4 O4 ? ? ? 1_555 B DA 3 N6 ? ? A DT 4 B DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 5 N3 ? ? ? 1_555 B DG 2 N1 ? ? A DC 5 B DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 5 N4 ? ? ? 1_555 B DG 2 O6 ? ? A DC 5 B DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DC 5 O2 ? ? ? 1_555 B DG 2 N2 ? ? A DC 5 B DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A PPZ 7 ? 4 'BINDING SITE FOR RESIDUE PPZ A 7' AC2 Software B PPZ 7 ? 4 'BINDING SITE FOR RESIDUE PPZ B 7' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 DC A 5 ? DC A 5 . ? 1_555 ? 2 AC1 4 DG A 6 ? DG A 6 . ? 1_555 ? 3 AC1 4 DC B 1 ? DC B 1 . ? 1_555 ? 4 AC1 4 DG B 2 ? DG B 2 . ? 1_555 ? 5 AC2 4 DC A 1 ? DC A 1 . ? 1_555 ? 6 AC2 4 DG A 2 ? DG A 2 . ? 1_555 ? 7 AC2 4 DC B 5 ? DC B 5 . ? 1_555 ? 8 AC2 4 DG B 6 ? DG B 6 . ? 1_555 ? # _database_PDB_matrix.entry_id 1I5V _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1I5V _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC C A . n A 1 2 DG 2 2 2 DG G A . n A 1 3 DA 3 3 3 DA A A . n A 1 4 DT 4 4 4 DT T A . n A 1 5 DC 5 5 5 DC C A . n A 1 6 DG 6 6 6 DG G A . n B 1 1 DC 1 1 1 DC C B . n B 1 2 DG 2 2 2 DG G B . n B 1 3 DA 3 3 3 DA A B . n B 1 4 DT 4 4 4 DT T B . n B 1 5 DC 5 5 5 DC C B . n B 1 6 DG 6 6 6 DG G B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PPZ 1 7 1 PPZ UNK A . D 2 PPZ 1 7 1 PPZ UNK B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2001-03-14 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-02-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_struct_assembly 4 4 'Structure model' pdbx_struct_oper_list 5 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 "H3'" A DC 1 ? ? "H5''" A DG 2 ? ? 1.35 2 4 "H2''" A DC 5 ? ? H8 A DG 6 ? ? 1.25 3 5 "H2''" A DC 5 ? ? H8 A DG 6 ? ? 1.30 4 7 "H2''" B DC 5 ? ? H8 B DG 6 ? ? 1.32 5 11 "H2''" A DC 5 ? ? H8 A DG 6 ? ? 1.33 6 18 "H2''" A DC 5 ? ? H8 A DG 6 ? ? 1.26 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 111.33 108.30 3.03 0.30 N 2 1 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 112.13 108.30 3.83 0.30 N 3 1 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 118.97 122.90 -3.93 0.60 N 4 1 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 110.67 108.30 2.37 0.30 N 5 1 "O4'" B DG 2 ? ? "C1'" B DG 2 ? ? N9 B DG 2 ? ? 110.14 108.30 1.84 0.30 N 6 1 "O4'" B DT 4 ? ? "C1'" B DT 4 ? ? N1 B DT 4 ? ? 110.32 108.30 2.02 0.30 N 7 1 "O4'" B DG 6 ? ? "C1'" B DG 6 ? ? N9 B DG 6 ? ? 110.40 108.30 2.10 0.30 N 8 2 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 110.74 108.30 2.44 0.30 N 9 2 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 111.20 108.30 2.90 0.30 N 10 2 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 111.09 108.30 2.79 0.30 N 11 2 "O4'" B DC 1 ? ? "C1'" B DC 1 ? ? N1 B DC 1 ? ? 113.26 108.30 4.96 0.30 N 12 2 "O4'" B DG 2 ? ? "C1'" B DG 2 ? ? N9 B DG 2 ? ? 110.22 108.30 1.92 0.30 N 13 2 "C1'" B DT 4 ? ? "O4'" B DT 4 ? ? "C4'" B DT 4 ? ? 103.93 110.10 -6.17 1.00 N 14 2 "O4'" B DT 4 ? ? "C1'" B DT 4 ? ? N1 B DT 4 ? ? 113.28 108.30 4.98 0.30 N 15 3 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 113.10 108.30 4.80 0.30 N 16 3 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 111.17 108.30 2.87 0.30 N 17 3 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 110.72 108.30 2.42 0.30 N 18 3 "O4'" B DG 2 ? ? "C1'" B DG 2 ? ? N9 B DG 2 ? ? 110.58 108.30 2.28 0.30 N 19 3 "O4'" B DT 4 ? ? "C1'" B DT 4 ? ? N1 B DT 4 ? ? 111.27 108.30 2.97 0.30 N 20 4 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 111.76 108.30 3.46 0.30 N 21 4 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 118.83 122.90 -4.07 0.60 N 22 4 "C1'" A DG 6 ? ? "O4'" A DG 6 ? ? "C4'" A DG 6 ? ? 103.96 110.10 -6.14 1.00 N 23 4 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 111.14 108.30 2.84 0.30 N 24 4 "O4'" B DG 2 ? ? "C1'" B DG 2 ? ? N9 B DG 2 ? ? 110.61 108.30 2.31 0.30 N 25 4 "O4'" B DA 3 ? ? "C1'" B DA 3 ? ? N9 B DA 3 ? ? 110.19 108.30 1.89 0.30 N 26 4 "C1'" B DT 4 ? ? "O4'" B DT 4 ? ? "C4'" B DT 4 ? ? 104.05 110.10 -6.05 1.00 N 27 4 "O4'" B DT 4 ? ? "C1'" B DT 4 ? ? N1 B DT 4 ? ? 113.46 108.30 5.16 0.30 N 28 5 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 111.86 108.30 3.56 0.30 N 29 5 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 111.28 108.30 2.98 0.30 N 30 5 "O4'" B DC 1 ? ? "C1'" B DC 1 ? ? N1 B DC 1 ? ? 110.12 108.30 1.82 0.30 N 31 5 "C1'" B DG 2 ? ? "O4'" B DG 2 ? ? "C4'" B DG 2 ? ? 102.03 110.10 -8.07 1.00 N 32 5 "O4'" B DG 2 ? ? "C1'" B DG 2 ? ? N9 B DG 2 ? ? 111.24 108.30 2.94 0.30 N 33 5 "C1'" B DT 4 ? ? "O4'" B DT 4 ? ? "C4'" B DT 4 ? ? 104.00 110.10 -6.10 1.00 N 34 5 "O4'" B DT 4 ? ? "C1'" B DT 4 ? ? N1 B DT 4 ? ? 113.58 108.30 5.28 0.30 N 35 5 "O4'" B DC 5 ? ? "C1'" B DC 5 ? ? N1 B DC 5 ? ? 110.60 108.30 2.30 0.30 N 36 6 "C1'" A DT 4 ? ? "O4'" A DT 4 ? ? "C4'" A DT 4 ? ? 103.64 110.10 -6.46 1.00 N 37 6 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 113.98 108.30 5.68 0.30 N 38 6 "O4'" B DC 1 ? ? "C1'" B DC 1 ? ? N1 B DC 1 ? ? 113.97 108.30 5.67 0.30 N 39 6 "O4'" B DT 4 ? ? "C1'" B DT 4 ? ? N1 B DT 4 ? ? 112.03 108.30 3.73 0.30 N 40 6 C6 B DT 4 ? ? C5 B DT 4 ? ? C7 B DT 4 ? ? 119.23 122.90 -3.67 0.60 N 41 6 "O4'" B DC 5 ? ? "C1'" B DC 5 ? ? N1 B DC 5 ? ? 110.62 108.30 2.32 0.30 N 42 7 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 110.88 108.30 2.58 0.30 N 43 7 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 110.96 108.30 2.66 0.30 N 44 7 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 111.89 108.30 3.59 0.30 N 45 7 "O4'" B DC 1 ? ? "C4'" B DC 1 ? ? "C3'" B DC 1 ? ? 109.89 106.00 3.89 0.60 N 46 7 "O4'" B DC 1 ? ? "C1'" B DC 1 ? ? N1 B DC 1 ? ? 112.32 108.30 4.02 0.30 N 47 7 "C1'" B DG 2 ? ? "O4'" B DG 2 ? ? "C4'" B DG 2 ? ? 103.88 110.10 -6.22 1.00 N 48 7 "O4'" B DG 2 ? ? "C1'" B DG 2 ? ? N9 B DG 2 ? ? 110.23 108.30 1.93 0.30 N 49 7 "O4'" B DT 4 ? ? "C1'" B DT 4 ? ? N1 B DT 4 ? ? 110.60 108.30 2.30 0.30 N 50 8 "O4'" A DC 1 ? ? "C4'" A DC 1 ? ? "C3'" A DC 1 ? ? 110.34 106.00 4.34 0.60 N 51 8 "C4'" A DC 1 ? ? "C3'" A DC 1 ? ? "C2'" A DC 1 ? ? 97.43 102.20 -4.77 0.70 N 52 8 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 111.78 108.30 3.48 0.30 N 53 8 "C1'" A DG 2 ? ? "O4'" A DG 2 ? ? "C4'" A DG 2 ? ? 103.69 110.10 -6.41 1.00 N 54 8 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 110.45 108.30 2.15 0.30 N 55 8 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 113.22 108.30 4.92 0.30 N 56 8 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 110.11 108.30 1.81 0.30 N 57 8 "O4'" B DC 1 ? ? "C1'" B DC 1 ? ? N1 B DC 1 ? ? 110.33 108.30 2.03 0.30 N 58 8 "O4'" B DT 4 ? ? "C1'" B DT 4 ? ? N1 B DT 4 ? ? 111.00 108.30 2.70 0.30 N 59 9 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 111.13 108.30 2.83 0.30 N 60 9 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 110.32 108.30 2.02 0.30 N 61 9 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 111.41 108.30 3.11 0.30 N 62 9 "O4'" B DT 4 ? ? "C1'" B DT 4 ? ? N1 B DT 4 ? ? 110.63 108.30 2.33 0.30 N 63 10 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 112.09 108.30 3.79 0.30 N 64 10 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 118.80 122.90 -4.10 0.60 N 65 10 "O4'" B DC 1 ? ? "C1'" B DC 1 ? ? N1 B DC 1 ? ? 112.71 108.30 4.41 0.30 N 66 10 "O4'" B DA 3 ? ? "C1'" B DA 3 ? ? N9 B DA 3 ? ? 110.84 108.30 2.54 0.30 N 67 10 "C1'" B DT 4 ? ? "O4'" B DT 4 ? ? "C4'" B DT 4 ? ? 102.58 110.10 -7.52 1.00 N 68 10 "O4'" B DT 4 ? ? "C1'" B DT 4 ? ? N1 B DT 4 ? ? 115.03 108.30 6.73 0.30 N 69 11 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 111.88 108.30 3.58 0.30 N 70 11 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 111.11 108.30 2.81 0.30 N 71 11 "O4'" B DC 1 ? ? "C1'" B DC 1 ? ? N1 B DC 1 ? ? 111.82 108.30 3.52 0.30 N 72 11 "O4'" B DT 4 ? ? "C1'" B DT 4 ? ? N1 B DT 4 ? ? 112.46 108.30 4.16 0.30 N 73 11 "O4'" B DC 5 ? ? "C1'" B DC 5 ? ? N1 B DC 5 ? ? 110.34 108.30 2.04 0.30 N 74 12 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 111.29 108.30 2.99 0.30 N 75 12 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 112.77 108.30 4.47 0.30 N 76 12 "O4'" B DT 4 ? ? "C1'" B DT 4 ? ? N1 B DT 4 ? ? 111.63 108.30 3.33 0.30 N 77 13 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 110.89 108.30 2.59 0.30 N 78 13 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 111.61 108.30 3.31 0.30 N 79 13 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 112.81 108.30 4.51 0.30 N 80 13 "O4'" B DC 1 ? ? "C1'" B DC 1 ? ? N1 B DC 1 ? ? 111.37 108.30 3.07 0.30 N 81 13 "O4'" B DT 4 ? ? "C1'" B DT 4 ? ? N1 B DT 4 ? ? 111.73 108.30 3.43 0.30 N 82 13 "O4'" B DC 5 ? ? "C1'" B DC 5 ? ? N1 B DC 5 ? ? 110.45 108.30 2.15 0.30 N 83 14 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 111.54 108.30 3.24 0.30 N 84 14 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 113.64 108.30 5.34 0.30 N 85 14 "O4'" B DC 1 ? ? "C1'" B DC 1 ? ? N1 B DC 1 ? ? 111.59 108.30 3.29 0.30 N 86 14 "O4'" B DG 2 ? ? "C1'" B DG 2 ? ? N9 B DG 2 ? ? 110.43 108.30 2.13 0.30 N 87 14 "O4'" B DT 4 ? ? "C1'" B DT 4 ? ? N1 B DT 4 ? ? 111.18 108.30 2.88 0.30 N 88 14 C6 B DT 4 ? ? C5 B DT 4 ? ? C7 B DT 4 ? ? 119.29 122.90 -3.61 0.60 N 89 15 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 110.60 108.30 2.30 0.30 N 90 15 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 110.49 108.30 2.19 0.30 N 91 15 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 110.35 108.30 2.05 0.30 N 92 15 "O4'" B DG 2 ? ? "C1'" B DG 2 ? ? N9 B DG 2 ? ? 111.25 108.30 2.95 0.30 N 93 15 "O4'" B DT 4 ? ? "C1'" B DT 4 ? ? N1 B DT 4 ? ? 111.89 108.30 3.59 0.30 N 94 15 "O4'" B DC 5 ? ? "C1'" B DC 5 ? ? N1 B DC 5 ? ? 111.63 108.30 3.33 0.30 N 95 16 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 111.03 108.30 2.73 0.30 N 96 16 "O4'" A DA 3 ? ? "C1'" A DA 3 ? ? N9 A DA 3 ? ? 110.87 108.30 2.57 0.30 N 97 16 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 110.44 108.30 2.14 0.30 N 98 16 "O4'" B DC 1 ? ? "C1'" B DC 1 ? ? N1 B DC 1 ? ? 111.61 108.30 3.31 0.30 N 99 16 "O4'" B DT 4 ? ? "C1'" B DT 4 ? ? N1 B DT 4 ? ? 111.59 108.30 3.29 0.30 N 100 16 C6 B DT 4 ? ? C5 B DT 4 ? ? C7 B DT 4 ? ? 119.26 122.90 -3.64 0.60 N 101 17 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 110.54 108.30 2.24 0.30 N 102 17 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 111.47 108.30 3.17 0.30 N 103 17 "O4'" B DT 4 ? ? "C1'" B DT 4 ? ? N1 B DT 4 ? ? 111.54 108.30 3.24 0.30 N 104 17 "O4'" B DC 5 ? ? "C1'" B DC 5 ? ? N1 B DC 5 ? ? 110.39 108.30 2.09 0.30 N 105 18 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 110.41 108.30 2.11 0.30 N 106 18 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 110.98 108.30 2.68 0.30 N 107 18 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 111.18 108.30 2.88 0.30 N 108 18 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 118.71 122.90 -4.19 0.60 N 109 18 "O4'" B DC 1 ? ? "C1'" B DC 1 ? ? N1 B DC 1 ? ? 111.73 108.30 3.43 0.30 N 110 18 "O4'" B DG 2 ? ? "C1'" B DG 2 ? ? N9 B DG 2 ? ? 110.77 108.30 2.47 0.30 N 111 18 "O4'" B DT 4 ? ? "C1'" B DT 4 ? ? N1 B DT 4 ? ? 112.84 108.30 4.54 0.30 N 112 19 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 110.31 108.30 2.01 0.30 N 113 19 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? "C2'" A DT 4 ? ? 100.87 105.90 -5.03 0.80 N 114 19 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 113.50 108.30 5.20 0.30 N 115 19 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 113.01 108.30 4.71 0.30 N 116 19 "O4'" B DC 1 ? ? "C1'" B DC 1 ? ? N1 B DC 1 ? ? 112.88 108.30 4.58 0.30 N 117 19 "O4'" B DT 4 ? ? "C1'" B DT 4 ? ? N1 B DT 4 ? ? 111.22 108.30 2.92 0.30 N 118 19 "O4'" B DC 5 ? ? "C1'" B DC 5 ? ? N1 B DC 5 ? ? 110.72 108.30 2.42 0.30 N 119 20 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 111.88 108.30 3.58 0.30 N 120 20 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 110.78 108.30 2.48 0.30 N 121 20 "O4'" A DA 3 ? ? "C1'" A DA 3 ? ? N9 A DA 3 ? ? 110.20 108.30 1.90 0.30 N 122 20 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 113.29 108.30 4.99 0.30 N 123 20 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 112.23 108.30 3.93 0.30 N 124 20 "C1'" B DG 2 ? ? "O4'" B DG 2 ? ? "C4'" B DG 2 ? ? 102.53 110.10 -7.57 1.00 N 125 20 "O4'" B DT 4 ? ? "C1'" B DT 4 ? ? N1 B DT 4 ? ? 113.21 108.30 4.91 0.30 N 126 21 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 110.66 108.30 2.36 0.30 N 127 21 "O4'" A DA 3 ? ? "C1'" A DA 3 ? ? N9 A DA 3 ? ? 111.06 108.30 2.76 0.30 N 128 21 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 110.48 108.30 2.18 0.30 N 129 21 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 110.72 108.30 2.42 0.30 N 130 21 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 110.15 108.30 1.85 0.30 N 131 21 "O4'" B DC 1 ? ? "C1'" B DC 1 ? ? N1 B DC 1 ? ? 111.07 108.30 2.77 0.30 N 132 21 "C1'" B DT 4 ? ? "O4'" B DT 4 ? ? "C4'" B DT 4 ? ? 103.87 110.10 -6.23 1.00 N 133 21 "O4'" B DT 4 ? ? "C1'" B DT 4 ? ? N1 B DT 4 ? ? 113.16 108.30 4.86 0.30 N 134 22 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 110.72 108.30 2.42 0.30 N 135 22 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 113.46 108.30 5.16 0.30 N 136 22 "O4'" B DA 3 ? ? "C1'" B DA 3 ? ? N9 B DA 3 ? ? 110.66 108.30 2.36 0.30 N # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DC A 1 ? ? 0.071 'SIDE CHAIN' 2 1 DC A 5 ? ? 0.141 'SIDE CHAIN' 3 1 DG A 6 ? ? 0.152 'SIDE CHAIN' 4 1 DG B 2 ? ? 0.080 'SIDE CHAIN' 5 1 DC B 5 ? ? 0.135 'SIDE CHAIN' 6 1 DG B 6 ? ? 0.135 'SIDE CHAIN' 7 2 DC A 1 ? ? 0.060 'SIDE CHAIN' 8 2 DA A 3 ? ? 0.075 'SIDE CHAIN' 9 2 DG A 6 ? ? 0.127 'SIDE CHAIN' 10 2 DC B 1 ? ? 0.082 'SIDE CHAIN' 11 2 DG B 2 ? ? 0.071 'SIDE CHAIN' 12 2 DC B 5 ? ? 0.126 'SIDE CHAIN' 13 2 DG B 6 ? ? 0.160 'SIDE CHAIN' 14 3 DC A 1 ? ? 0.067 'SIDE CHAIN' 15 3 DG A 2 ? ? 0.085 'SIDE CHAIN' 16 3 DC A 5 ? ? 0.105 'SIDE CHAIN' 17 3 DG A 6 ? ? 0.162 'SIDE CHAIN' 18 3 DG B 2 ? ? 0.067 'SIDE CHAIN' 19 3 DG B 6 ? ? 0.142 'SIDE CHAIN' 20 4 DG A 2 ? ? 0.074 'SIDE CHAIN' 21 4 DC A 5 ? ? 0.072 'SIDE CHAIN' 22 4 DG A 6 ? ? 0.159 'SIDE CHAIN' 23 4 DC B 1 ? ? 0.060 'SIDE CHAIN' 24 4 DC B 5 ? ? 0.088 'SIDE CHAIN' 25 4 DG B 6 ? ? 0.160 'SIDE CHAIN' 26 5 DC A 1 ? ? 0.071 'SIDE CHAIN' 27 5 DC A 5 ? ? 0.075 'SIDE CHAIN' 28 5 DG A 6 ? ? 0.136 'SIDE CHAIN' 29 5 DC B 1 ? ? 0.093 'SIDE CHAIN' 30 5 DC B 5 ? ? 0.122 'SIDE CHAIN' 31 5 DG B 6 ? ? 0.131 'SIDE CHAIN' 32 6 DC A 5 ? ? 0.081 'SIDE CHAIN' 33 6 DG A 6 ? ? 0.170 'SIDE CHAIN' 34 6 DC B 1 ? ? 0.142 'SIDE CHAIN' 35 6 DG B 2 ? ? 0.055 'SIDE CHAIN' 36 6 DA B 3 ? ? 0.076 'SIDE CHAIN' 37 6 DC B 5 ? ? 0.114 'SIDE CHAIN' 38 6 DG B 6 ? ? 0.161 'SIDE CHAIN' 39 7 DC A 1 ? ? 0.092 'SIDE CHAIN' 40 7 DC A 5 ? ? 0.094 'SIDE CHAIN' 41 7 DG A 6 ? ? 0.156 'SIDE CHAIN' 42 7 DC B 1 ? ? 0.070 'SIDE CHAIN' 43 7 DG B 2 ? ? 0.056 'SIDE CHAIN' 44 7 DA B 3 ? ? 0.063 'SIDE CHAIN' 45 7 DC B 5 ? ? 0.072 'SIDE CHAIN' 46 7 DG B 6 ? ? 0.161 'SIDE CHAIN' 47 8 DG A 2 ? ? 0.082 'SIDE CHAIN' 48 8 DC A 5 ? ? 0.102 'SIDE CHAIN' 49 8 DG A 6 ? ? 0.132 'SIDE CHAIN' 50 8 DG B 6 ? ? 0.146 'SIDE CHAIN' 51 9 DC A 5 ? ? 0.096 'SIDE CHAIN' 52 9 DG A 6 ? ? 0.138 'SIDE CHAIN' 53 9 DC B 5 ? ? 0.064 'SIDE CHAIN' 54 9 DG B 6 ? ? 0.157 'SIDE CHAIN' 55 10 DG A 2 ? ? 0.078 'SIDE CHAIN' 56 10 DG A 6 ? ? 0.139 'SIDE CHAIN' 57 10 DC B 1 ? ? 0.109 'SIDE CHAIN' 58 10 DG B 2 ? ? 0.067 'SIDE CHAIN' 59 10 DC B 5 ? ? 0.081 'SIDE CHAIN' 60 10 DG B 6 ? ? 0.149 'SIDE CHAIN' 61 11 DC A 5 ? ? 0.151 'SIDE CHAIN' 62 11 DG A 6 ? ? 0.137 'SIDE CHAIN' 63 11 DC B 1 ? ? 0.084 'SIDE CHAIN' 64 11 DC B 5 ? ? 0.103 'SIDE CHAIN' 65 11 DG B 6 ? ? 0.142 'SIDE CHAIN' 66 12 DC A 1 ? ? 0.088 'SIDE CHAIN' 67 12 DC A 5 ? ? 0.088 'SIDE CHAIN' 68 12 DG A 6 ? ? 0.170 'SIDE CHAIN' 69 12 DC B 5 ? ? 0.070 'SIDE CHAIN' 70 12 DG B 6 ? ? 0.169 'SIDE CHAIN' 71 13 DC A 1 ? ? 0.062 'SIDE CHAIN' 72 13 DC A 5 ? ? 0.095 'SIDE CHAIN' 73 13 DG A 6 ? ? 0.169 'SIDE CHAIN' 74 13 DC B 1 ? ? 0.106 'SIDE CHAIN' 75 13 DC B 5 ? ? 0.107 'SIDE CHAIN' 76 13 DG B 6 ? ? 0.149 'SIDE CHAIN' 77 14 DG A 2 ? ? 0.082 'SIDE CHAIN' 78 14 DA A 3 ? ? 0.068 'SIDE CHAIN' 79 14 DG A 6 ? ? 0.132 'SIDE CHAIN' 80 14 DG B 6 ? ? 0.154 'SIDE CHAIN' 81 15 DC A 1 ? ? 0.079 'SIDE CHAIN' 82 15 DC A 5 ? ? 0.080 'SIDE CHAIN' 83 15 DG A 6 ? ? 0.132 'SIDE CHAIN' 84 15 DC B 5 ? ? 0.103 'SIDE CHAIN' 85 15 DG B 6 ? ? 0.157 'SIDE CHAIN' 86 16 DG A 6 ? ? 0.150 'SIDE CHAIN' 87 16 DG B 2 ? ? 0.072 'SIDE CHAIN' 88 16 DG B 6 ? ? 0.127 'SIDE CHAIN' 89 17 DG A 2 ? ? 0.057 'SIDE CHAIN' 90 17 DC A 5 ? ? 0.097 'SIDE CHAIN' 91 17 DG A 6 ? ? 0.150 'SIDE CHAIN' 92 17 DC B 5 ? ? 0.068 'SIDE CHAIN' 93 17 DG B 6 ? ? 0.131 'SIDE CHAIN' 94 18 DC A 5 ? ? 0.106 'SIDE CHAIN' 95 18 DG A 6 ? ? 0.156 'SIDE CHAIN' 96 18 DC B 1 ? ? 0.135 'SIDE CHAIN' 97 18 DG B 6 ? ? 0.197 'SIDE CHAIN' 98 19 DG A 6 ? ? 0.135 'SIDE CHAIN' 99 19 DC B 1 ? ? 0.070 'SIDE CHAIN' 100 19 DG B 2 ? ? 0.067 'SIDE CHAIN' 101 19 DC B 5 ? ? 0.108 'SIDE CHAIN' 102 19 DG B 6 ? ? 0.167 'SIDE CHAIN' 103 20 DC A 1 ? ? 0.066 'SIDE CHAIN' 104 20 DC A 5 ? ? 0.125 'SIDE CHAIN' 105 20 DG A 6 ? ? 0.136 'SIDE CHAIN' 106 20 DC B 1 ? ? 0.070 'SIDE CHAIN' 107 20 DC B 5 ? ? 0.064 'SIDE CHAIN' 108 20 DG B 6 ? ? 0.163 'SIDE CHAIN' 109 21 DC A 1 ? ? 0.061 'SIDE CHAIN' 110 21 DG A 2 ? ? 0.075 'SIDE CHAIN' 111 21 DC A 5 ? ? 0.089 'SIDE CHAIN' 112 21 DG A 6 ? ? 0.148 'SIDE CHAIN' 113 21 DG B 6 ? ? 0.148 'SIDE CHAIN' 114 22 DC A 5 ? ? 0.075 'SIDE CHAIN' 115 22 DG A 6 ? ? 0.147 'SIDE CHAIN' 116 22 DG B 2 ? ? 0.086 'SIDE CHAIN' 117 22 DG B 6 ? ? 0.149 'SIDE CHAIN' # _ndb_struct_conf_na.entry_id 1I5V _ndb_struct_conf_na.feature 'double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 2 1_555 B DC 5 1_555 -0.600 -0.259 -0.735 -21.871 -5.818 0.430 1 A_DG2:DC5_B A 2 ? B 5 ? 19 1 1 A DA 3 1_555 B DT 4 1_555 -0.149 -0.180 -0.373 -8.998 -2.462 -1.519 2 A_DA3:DT4_B A 3 ? B 4 ? 20 1 1 A DT 4 1_555 B DA 3 1_555 -0.024 -0.167 0.083 -5.035 5.063 -0.419 3 A_DT4:DA3_B A 4 ? B 3 ? 20 1 1 A DC 5 1_555 B DG 2 1_555 0.605 -0.275 -0.818 20.860 -2.334 0.926 4 A_DC5:DG2_B A 5 ? B 2 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 2 1_555 B DC 5 1_555 A DA 3 1_555 B DT 4 1_555 -0.087 -0.196 2.859 -1.590 2.492 34.742 -0.658 -0.065 2.839 4.165 2.657 34.864 1 AA_DG2DA3:DT4DC5_BB A 2 ? B 5 ? A 3 ? B 4 ? 1 A DA 3 1_555 B DT 4 1_555 A DT 4 1_555 B DA 3 1_555 0.351 -1.063 3.197 -3.933 -4.989 24.085 -0.966 -1.998 3.250 -11.698 9.222 24.897 2 AA_DA3DT4:DA3DT4_BB A 3 ? B 4 ? A 4 ? B 3 ? 1 A DT 4 1_555 B DA 3 1_555 A DC 5 1_555 B DG 2 1_555 -0.007 -0.553 2.568 6.634 0.792 36.216 -0.959 0.719 2.516 1.260 -10.561 36.807 3 AA_DT4DC5:DG2DA3_BB A 4 ? B 3 ? A 5 ? B 2 ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name '2-(PYRIDO[1,2-E]PURIN-4-YL)AMINO-ETHANOL' _pdbx_entity_nonpoly.comp_id PPZ #