data_1IH4 # _entry.id 1IH4 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.386 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1IH4 pdb_00001ih4 10.2210/pdb1ih4/pdb NDB AD0023 ? ? RCSB RCSB013260 ? ? WWPDB D_1000013260 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2001-06-18 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-04 5 'Structure model' 1 4 2024-02-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Refinement description' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 5 5 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1IH4 _pdbx_database_status.recvd_initial_deposition_date 2001-04-18 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1IH1 'Crystal structure of the B-DNA hexamer GGCGCC resolved to 2.0 angstrom resolution' unspecified PDB 1IH2 'Crystal structure of GGBr5CGBr5CC' unspecified PDB 1IH3 'Multi-conformation crystal structure of GGm5CGm5CC' unspecified PDB 1IH6 'Multi-Conformation Crystal Structure of GGBr5CGCC' unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Vargason, J.M.' 1 'Henderson, K.' 2 'Ho, P.S.' 3 # _citation.id primary _citation.title 'A crystallographic map of the transition from B-DNA to A-DNA.' _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 98 _citation.page_first 7265 _citation.page_last 7270 _citation.year 2001 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 11390969 _citation.pdbx_database_id_DOI 10.1073/pnas.121176898 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Vargason, J.M.' 1 ? primary 'Henderson, K.' 2 ? primary 'Ho, P.S.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*GP*GP*(5CM)P*GP*CP*C)-3'" 1824.232 8 ? ? ? ? 2 water nat water 18.015 115 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(DG)(DG)(5CM)(DG)(DC)(DC)' _entity_poly.pdbx_seq_one_letter_code_can GGCGCC _entity_poly.pdbx_strand_id A,B,C,D,E,F,G,H _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DG n 1 3 5CM n 1 4 DG n 1 5 DC n 1 6 DC n # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 5CM 'DNA linking' n "5-METHYL-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE" ? 'C10 H16 N3 O7 P' 321.224 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 HOH non-polymer . WATER ? 'H2 O' 18.015 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG G A . n A 1 2 DG 2 2 2 DG G A . n A 1 3 5CM 3 3 3 5CM +C A . n A 1 4 DG 4 4 4 DG G A . n A 1 5 DC 5 5 5 DC C A . n A 1 6 DC 6 6 6 DC C A . n B 1 1 DG 1 7 7 DG G B . n B 1 2 DG 2 8 8 DG G B . n B 1 3 5CM 3 9 9 5CM +C B . n B 1 4 DG 4 10 10 DG G B . n B 1 5 DC 5 11 11 DC C B . n B 1 6 DC 6 12 12 DC C B . n C 1 1 DG 1 13 13 DG G C . n C 1 2 DG 2 14 14 DG G C . n C 1 3 5CM 3 15 15 5CM +C C . n C 1 4 DG 4 16 16 DG G C . n C 1 5 DC 5 17 17 DC C C . n C 1 6 DC 6 18 18 DC C C . n D 1 1 DG 1 19 19 DG G D . n D 1 2 DG 2 20 20 DG G D . n D 1 3 5CM 3 21 21 5CM +C D . n D 1 4 DG 4 22 22 DG G D . n D 1 5 DC 5 23 23 DC C D . n D 1 6 DC 6 24 24 DC C D . n E 1 1 DG 1 25 25 DG G E . n E 1 2 DG 2 26 26 DG G E . n E 1 3 5CM 3 27 27 5CM +C E . n E 1 4 DG 4 28 28 DG G E . n E 1 5 DC 5 29 29 DC C E . n E 1 6 DC 6 30 30 DC C E . n F 1 1 DG 1 31 31 DG G F . n F 1 2 DG 2 32 32 DG G F . n F 1 3 5CM 3 33 33 5CM +C F . n F 1 4 DG 4 34 34 DG G F . n F 1 5 DC 5 35 35 DC C F . n F 1 6 DC 6 36 36 DC C F . n G 1 1 DG 1 37 37 DG G G . n G 1 2 DG 2 38 38 DG G G . n G 1 3 5CM 3 39 39 5CM +C G . n G 1 4 DG 4 40 40 DG G G . n G 1 5 DC 5 41 41 DC C G . n G 1 6 DC 6 42 42 DC C G . n H 1 1 DG 1 43 43 DG G H . n H 1 2 DG 2 44 44 DG G H . n H 1 3 5CM 3 45 45 5CM +C H . n H 1 4 DG 4 46 46 DG G H . n H 1 5 DC 5 47 47 DC C H . n H 1 6 DC 6 48 48 DC C H . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code I 2 HOH 1 49 49 HOH HOH A . I 2 HOH 2 50 50 HOH HOH A . I 2 HOH 3 51 51 HOH HOH A . I 2 HOH 4 52 52 HOH HOH A . I 2 HOH 5 53 53 HOH HOH A . I 2 HOH 6 54 54 HOH HOH A . I 2 HOH 7 55 55 HOH HOH A . I 2 HOH 8 56 56 HOH HOH A . I 2 HOH 9 57 57 HOH HOH A . I 2 HOH 10 58 58 HOH HOH A . I 2 HOH 11 59 59 HOH HOH A . I 2 HOH 12 94 94 HOH HOH A . I 2 HOH 13 122 122 HOH HOH A . I 2 HOH 14 139 139 HOH HOH A . I 2 HOH 15 146 146 HOH HOH A . I 2 HOH 16 147 147 HOH HOH A . I 2 HOH 17 159 159 HOH HOH A . J 2 HOH 1 63 63 HOH HOH B . J 2 HOH 2 64 64 HOH HOH B . J 2 HOH 3 65 65 HOH HOH B . J 2 HOH 4 66 66 HOH HOH B . J 2 HOH 5 67 67 HOH HOH B . J 2 HOH 6 68 68 HOH HOH B . J 2 HOH 7 69 69 HOH HOH B . J 2 HOH 8 70 70 HOH HOH B . J 2 HOH 9 71 71 HOH HOH B . J 2 HOH 10 72 72 HOH HOH B . J 2 HOH 11 73 73 HOH HOH B . J 2 HOH 12 74 74 HOH HOH B . J 2 HOH 13 145 145 HOH HOH B . J 2 HOH 14 148 148 HOH HOH B . K 2 HOH 1 62 62 HOH HOH C . K 2 HOH 2 75 75 HOH HOH C . K 2 HOH 3 76 76 HOH HOH C . K 2 HOH 4 77 77 HOH HOH C . K 2 HOH 5 78 78 HOH HOH C . K 2 HOH 6 79 79 HOH HOH C . K 2 HOH 7 80 80 HOH HOH C . K 2 HOH 8 81 81 HOH HOH C . K 2 HOH 9 82 82 HOH HOH C . K 2 HOH 10 83 83 HOH HOH C . K 2 HOH 11 84 84 HOH HOH C . K 2 HOH 12 86 86 HOH HOH C . K 2 HOH 13 88 88 HOH HOH C . K 2 HOH 14 135 135 HOH HOH C . K 2 HOH 15 138 138 HOH HOH C . K 2 HOH 16 149 149 HOH HOH C . K 2 HOH 17 150 150 HOH HOH C . K 2 HOH 18 151 151 HOH HOH C . K 2 HOH 19 152 152 HOH HOH C . L 2 HOH 1 60 60 HOH HOH D . L 2 HOH 2 61 61 HOH HOH D . L 2 HOH 3 89 89 HOH HOH D . L 2 HOH 4 90 90 HOH HOH D . L 2 HOH 5 91 91 HOH HOH D . L 2 HOH 6 92 92 HOH HOH D . L 2 HOH 7 93 93 HOH HOH D . L 2 HOH 8 95 95 HOH HOH D . L 2 HOH 9 96 96 HOH HOH D . L 2 HOH 10 97 97 HOH HOH D . L 2 HOH 11 98 98 HOH HOH D . L 2 HOH 12 99 99 HOH HOH D . L 2 HOH 13 123 123 HOH HOH D . L 2 HOH 14 136 136 HOH HOH D . L 2 HOH 15 137 137 HOH HOH D . L 2 HOH 16 144 144 HOH HOH D . L 2 HOH 17 153 153 HOH HOH D . L 2 HOH 18 154 154 HOH HOH D . L 2 HOH 19 160 160 HOH HOH D . M 2 HOH 1 85 85 HOH HOH E . M 2 HOH 2 100 100 HOH HOH E . M 2 HOH 3 101 101 HOH HOH E . M 2 HOH 4 102 102 HOH HOH E . M 2 HOH 5 103 103 HOH HOH E . M 2 HOH 6 104 104 HOH HOH E . M 2 HOH 7 105 105 HOH HOH E . M 2 HOH 8 106 106 HOH HOH E . M 2 HOH 9 107 107 HOH HOH E . M 2 HOH 10 108 108 HOH HOH E . M 2 HOH 11 109 109 HOH HOH E . M 2 HOH 12 110 110 HOH HOH E . M 2 HOH 13 111 111 HOH HOH E . M 2 HOH 14 128 128 HOH HOH E . M 2 HOH 15 155 155 HOH HOH E . M 2 HOH 16 156 156 HOH HOH E . M 2 HOH 17 157 157 HOH HOH E . M 2 HOH 18 161 161 HOH HOH E . N 2 HOH 1 112 112 HOH HOH F . N 2 HOH 2 113 113 HOH HOH F . N 2 HOH 3 114 114 HOH HOH F . N 2 HOH 4 115 115 HOH HOH F . N 2 HOH 5 116 116 HOH HOH F . N 2 HOH 6 117 117 HOH HOH F . N 2 HOH 7 118 118 HOH HOH F . N 2 HOH 8 119 119 HOH HOH F . N 2 HOH 9 120 120 HOH HOH F . N 2 HOH 10 121 121 HOH HOH F . N 2 HOH 11 140 140 HOH HOH F . N 2 HOH 12 141 141 HOH HOH F . N 2 HOH 13 142 142 HOH HOH F . N 2 HOH 14 162 162 HOH HOH F . O 2 HOH 1 124 124 HOH HOH G . O 2 HOH 2 125 125 HOH HOH G . O 2 HOH 3 126 126 HOH HOH G . O 2 HOH 4 127 127 HOH HOH G . O 2 HOH 5 129 129 HOH HOH G . O 2 HOH 6 143 143 HOH HOH G . P 2 HOH 1 87 87 HOH HOH H . P 2 HOH 2 130 130 HOH HOH H . P 2 HOH 3 131 131 HOH HOH H . P 2 HOH 4 132 132 HOH HOH H . P 2 HOH 5 133 133 HOH HOH H . P 2 HOH 6 134 134 HOH HOH H . P 2 HOH 7 158 158 HOH HOH H . P 2 HOH 8 163 163 HOH HOH H . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement . ? 1 SCALEPACK 'data scaling' . ? 2 CNS phasing . ? 3 # _cell.entry_id 1IH4 _cell.length_a 41.934 _cell.length_b 41.934 _cell.length_c 176.697 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1IH4 _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 # _exptl.entry_id 1IH4 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.54 _exptl_crystal.density_percent_sol 65.29 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.pdbx_details 'magnesium chloride, sodium cacodylate, spermine tetrahydrochloride, pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'magnesium chloride' ? ? ? 1 2 1 'sodium cacodylate' ? ? ? 1 3 1 'spermine tetrahydrochloride' ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 298 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date 2000-08-18 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Yale Mirrors' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU300' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 1IH4 _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 99.0 _reflns.d_resolution_high 1.9 _reflns.number_obs 14957 _reflns.number_all 14957 _reflns.percent_possible_obs 99.0 _reflns.pdbx_Rmerge_I_obs 0.042 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 39.1 _reflns.B_iso_Wilson_estimate 43.3 _reflns.pdbx_redundancy 7.2 _reflns.R_free_details ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.90 _reflns_shell.d_res_low 1.97 _reflns_shell.percent_possible_all 96.5 _reflns_shell.Rmerge_I_obs 0.407 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 4.0 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1IH4 _refine.ls_number_reflns_obs 14930 _refine.ls_number_reflns_all 14930 _refine.pdbx_ls_sigma_I 0.0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_d_res_low 20.0 _refine.ls_d_res_high 1.9 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.189 _refine.ls_R_factor_all 0.189 _refine.ls_R_factor_R_work 0.185 _refine.ls_R_factor_R_free 0.204 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 698 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'G.Parkinson, J.Vojtechovsky, L.Clowney, A.T.Brunger, H.M.Berman' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details Random _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 960 _refine_hist.pdbx_number_atoms_ligand 8 _refine_hist.number_atoms_solvent 115 _refine_hist.number_atoms_total 1083 _refine_hist.d_res_high 1.9 _refine_hist.d_res_low 20.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.003 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 0.81 ? ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 1IH4 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1IH4 _struct.title 'Multi-Conformation Crystal Structure of GGm5CGCC' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1IH4 _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'B to A DNA transition, DNA transition, structural transition, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 1 ? F N N 1 ? G N N 1 ? H N N 1 ? I N N 2 ? J N N 2 ? K N N 2 ? L N N 2 ? M N N 2 ? N N N 2 ? O N N 2 ? P N N 2 ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 1IH4 _struct_ref.pdbx_db_accession 1IH4 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1IH4 A 1 ? 6 ? 1IH4 1 ? 6 ? 1 6 2 1 1IH4 B 1 ? 6 ? 1IH4 7 ? 12 ? 7 12 3 1 1IH4 C 1 ? 6 ? 1IH4 13 ? 18 ? 13 18 4 1 1IH4 D 1 ? 6 ? 1IH4 19 ? 24 ? 19 24 5 1 1IH4 E 1 ? 6 ? 1IH4 25 ? 30 ? 25 30 6 1 1IH4 F 1 ? 6 ? 1IH4 31 ? 36 ? 31 36 7 1 1IH4 G 1 ? 6 ? 1IH4 37 ? 42 ? 37 42 8 1 1IH4 H 1 ? 6 ? 1IH4 43 ? 48 ? 43 48 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? dimeric 2 2 author_defined_assembly ? dimeric 2 3 author_defined_assembly ? dimeric 2 4 author_defined_assembly ? dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,I,J 2 1 C,D,K,L 3 1 E,F,M,N 4 1 G,H,O,P # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_biol.id _struct_biol.pdbx_parent_biol_id _struct_biol.details 1 ? ? 2 ? ? 3 ? ? 4 ? ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A DG 2 "O3'" ? ? ? 1_555 A 5CM 3 P ? ? A DG 2 A 5CM 3 1_555 ? ? ? ? ? ? ? 1.608 ? ? covale2 covale both ? A 5CM 3 "O3'" ? ? ? 1_555 A DG 4 P ? ? A 5CM 3 A DG 4 1_555 ? ? ? ? ? ? ? 1.607 ? ? covale3 covale both ? B DG 2 "O3'" ? ? ? 1_555 B 5CM 3 P ? ? B DG 8 B 5CM 9 1_555 ? ? ? ? ? ? ? 1.606 ? ? covale4 covale both ? B 5CM 3 "O3'" ? ? ? 1_555 B DG 4 P ? ? B 5CM 9 B DG 10 1_555 ? ? ? ? ? ? ? 1.605 ? ? covale5 covale both ? C DG 2 "O3'" ? ? ? 1_555 C 5CM 3 P ? ? C DG 14 C 5CM 15 1_555 ? ? ? ? ? ? ? 1.607 ? ? covale6 covale both ? C 5CM 3 "O3'" ? ? ? 1_555 C DG 4 P ? ? C 5CM 15 C DG 16 1_555 ? ? ? ? ? ? ? 1.604 ? ? covale7 covale both ? D DG 2 "O3'" ? ? ? 1_555 D 5CM 3 P ? ? D DG 20 D 5CM 21 1_555 ? ? ? ? ? ? ? 1.607 ? ? covale8 covale both ? D 5CM 3 "O3'" ? ? ? 1_555 D DG 4 P ? ? D 5CM 21 D DG 22 1_555 ? ? ? ? ? ? ? 1.603 ? ? covale9 covale both ? E DG 2 "O3'" ? ? ? 1_555 E 5CM 3 P ? ? E DG 26 E 5CM 27 1_555 ? ? ? ? ? ? ? 1.606 ? ? covale10 covale both ? E 5CM 3 "O3'" ? ? ? 1_555 E DG 4 P ? ? E 5CM 27 E DG 28 1_555 ? ? ? ? ? ? ? 1.604 ? ? covale11 covale both ? F DG 2 "O3'" ? ? ? 1_555 F 5CM 3 P ? ? F DG 32 F 5CM 33 1_555 ? ? ? ? ? ? ? 1.606 ? ? covale12 covale both ? F 5CM 3 "O3'" ? ? ? 1_555 F DG 4 P ? ? F 5CM 33 F DG 34 1_555 ? ? ? ? ? ? ? 1.606 ? ? covale13 covale both ? G DG 2 "O3'" ? ? ? 1_555 G 5CM 3 P ? ? G DG 38 G 5CM 39 1_555 ? ? ? ? ? ? ? 1.605 ? ? covale14 covale both ? G 5CM 3 "O3'" ? ? ? 1_555 G DG 4 P ? ? G 5CM 39 G DG 40 1_555 ? ? ? ? ? ? ? 1.608 ? ? covale15 covale both ? H DG 2 "O3'" ? ? ? 1_555 H 5CM 3 P ? ? H DG 44 H 5CM 45 1_555 ? ? ? ? ? ? ? 1.605 ? ? covale16 covale both ? H 5CM 3 "O3'" ? ? ? 1_555 H DG 4 P ? ? H 5CM 45 H DG 46 1_555 ? ? ? ? ? ? ? 1.610 ? ? hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 B DC 6 N3 ? ? A DG 1 B DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 B DC 6 O2 ? ? A DG 1 B DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 1 O6 ? ? ? 1_555 B DC 6 N4 ? ? A DG 1 B DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DG 2 N1 ? ? ? 1_555 B DC 5 N3 ? ? A DG 2 B DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DG 2 N2 ? ? ? 1_555 B DC 5 O2 ? ? A DG 2 B DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B DC 5 N4 ? ? A DG 2 B DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A 5CM 3 N3 ? ? ? 1_555 B DG 4 N1 ? ? A 5CM 3 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A 5CM 3 N4 ? ? ? 1_555 B DG 4 O6 ? ? A 5CM 3 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A 5CM 3 O2 ? ? ? 1_555 B DG 4 N2 ? ? A 5CM 3 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 4 N1 ? ? ? 1_555 B 5CM 3 N3 ? ? A DG 4 B 5CM 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 4 N2 ? ? ? 1_555 B 5CM 3 O2 ? ? A DG 4 B 5CM 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B 5CM 3 N4 ? ? A DG 4 B 5CM 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 5 N3 ? ? ? 1_555 B DG 2 N1 ? ? A DC 5 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 5 N4 ? ? ? 1_555 B DG 2 O6 ? ? A DC 5 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 5 O2 ? ? ? 1_555 B DG 2 N2 ? ? A DC 5 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 6 N3 ? ? ? 1_555 B DG 1 N1 ? ? A DC 6 B DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DC 6 N4 ? ? ? 1_555 B DG 1 O6 ? ? A DC 6 B DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DC 6 O2 ? ? ? 1_555 B DG 1 N2 ? ? A DC 6 B DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DC 6 O2 ? ? ? 1_555 D DG 1 N2 ? ? A DC 6 D DG 19 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog20 hydrog ? ? C DG 1 N1 ? ? ? 1_555 D DC 6 N3 ? ? C DG 13 D DC 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DG 1 N2 ? ? ? 1_555 D DC 6 O2 ? ? C DG 13 D DC 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C DG 1 O6 ? ? ? 1_555 D DC 6 N4 ? ? C DG 13 D DC 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C DG 2 N1 ? ? ? 1_555 D DC 5 N3 ? ? C DG 14 D DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C DG 2 N2 ? ? ? 1_555 D DC 5 O2 ? ? C DG 14 D DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C DG 2 O6 ? ? ? 1_555 D DC 5 N4 ? ? C DG 14 D DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C 5CM 3 N3 ? ? ? 1_555 D DG 4 N1 ? ? C 5CM 15 D DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C 5CM 3 N4 ? ? ? 1_555 D DG 4 O6 ? ? C 5CM 15 D DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? C 5CM 3 O2 ? ? ? 1_555 D DG 4 N2 ? ? C 5CM 15 D DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? C DG 4 N1 ? ? ? 1_555 D 5CM 3 N3 ? ? C DG 16 D 5CM 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C DG 4 N2 ? ? ? 1_555 D 5CM 3 O2 ? ? C DG 16 D 5CM 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C DG 4 O6 ? ? ? 1_555 D 5CM 3 N4 ? ? C DG 16 D 5CM 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C DC 5 N3 ? ? ? 1_555 D DG 2 N1 ? ? C DC 17 D DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C DC 5 N4 ? ? ? 1_555 D DG 2 O6 ? ? C DC 17 D DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C DC 5 O2 ? ? ? 1_555 D DG 2 N2 ? ? C DC 17 D DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C DC 6 N3 ? ? ? 1_555 D DG 1 N1 ? ? C DC 18 D DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C DC 6 N4 ? ? ? 1_555 D DG 1 O6 ? ? C DC 18 D DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? C DC 6 O2 ? ? ? 1_555 D DG 1 N2 ? ? C DC 18 D DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? E DG 1 N1 ? ? ? 1_555 F DC 6 N3 ? ? E DG 25 F DC 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? E DG 1 N2 ? ? ? 1_555 F DC 6 O2 ? ? E DG 25 F DC 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? E DG 1 O6 ? ? ? 1_555 F DC 6 N4 ? ? E DG 25 F DC 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? E DG 2 N1 ? ? ? 1_555 F DC 5 N3 ? ? E DG 26 F DC 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? E DG 2 N2 ? ? ? 1_555 F DC 5 O2 ? ? E DG 26 F DC 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? E DG 2 O6 ? ? ? 1_555 F DC 5 N4 ? ? E DG 26 F DC 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? E 5CM 3 N3 ? ? ? 1_555 F DG 4 N1 ? ? E 5CM 27 F DG 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? E 5CM 3 N4 ? ? ? 1_555 F DG 4 O6 ? ? E 5CM 27 F DG 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? E 5CM 3 O2 ? ? ? 1_555 F DG 4 N2 ? ? E 5CM 27 F DG 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? E DG 4 N1 ? ? ? 1_555 F 5CM 3 N3 ? ? E DG 28 F 5CM 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? E DG 4 N2 ? ? ? 1_555 F 5CM 3 O2 ? ? E DG 28 F 5CM 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? E DG 4 O6 ? ? ? 1_555 F 5CM 3 N4 ? ? E DG 28 F 5CM 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? E DC 5 N3 ? ? ? 1_555 F DG 2 N1 ? ? E DC 29 F DG 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? E DC 5 N4 ? ? ? 1_555 F DG 2 O6 ? ? E DC 29 F DG 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? E DC 5 O2 ? ? ? 1_555 F DG 2 N2 ? ? E DC 29 F DG 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? E DC 6 N3 ? ? ? 1_555 F DG 1 N1 ? ? E DC 30 F DG 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? E DC 6 N4 ? ? ? 1_555 F DG 1 O6 ? ? E DC 30 F DG 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? E DC 6 O2 ? ? ? 1_555 F DG 1 N2 ? ? E DC 30 F DG 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? G DG 1 N1 ? ? ? 1_555 H DC 6 N3 ? ? G DG 37 H DC 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? G DG 1 N2 ? ? ? 1_555 H DC 6 O2 ? ? G DG 37 H DC 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? G DG 1 O6 ? ? ? 1_555 H DC 6 N4 ? ? G DG 37 H DC 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? G DG 2 N1 ? ? ? 1_555 H DC 5 N3 ? ? G DG 38 H DC 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? G DG 2 N2 ? ? ? 1_555 H DC 5 O2 ? ? G DG 38 H DC 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? G DG 2 O6 ? ? ? 1_555 H DC 5 N4 ? ? G DG 38 H DC 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? G 5CM 3 N3 ? ? ? 1_555 H DG 4 N1 ? ? G 5CM 39 H DG 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? G 5CM 3 N4 ? ? ? 1_555 H DG 4 O6 ? ? G 5CM 39 H DG 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? G 5CM 3 O2 ? ? ? 1_555 H DG 4 N2 ? ? G 5CM 39 H DG 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? G DG 4 N1 ? ? ? 1_555 H 5CM 3 N3 ? ? G DG 40 H 5CM 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? G DG 4 N2 ? ? ? 1_555 H 5CM 3 O2 ? ? G DG 40 H 5CM 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? G DG 4 O6 ? ? ? 1_555 H 5CM 3 N4 ? ? G DG 40 H 5CM 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? G DC 5 N3 ? ? ? 1_555 H DG 2 N1 ? ? G DC 41 H DG 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? G DC 5 N4 ? ? ? 1_555 H DG 2 O6 ? ? G DC 41 H DG 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? G DC 5 O2 ? ? ? 1_555 H DG 2 N2 ? ? G DC 41 H DG 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? G DC 6 N3 ? ? ? 1_555 H DG 1 N1 ? ? G DC 42 H DG 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? G DC 6 N4 ? ? ? 1_555 H DG 1 O6 ? ? G DC 42 H DG 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? G DC 6 O2 ? ? ? 1_555 H DG 1 N2 ? ? G DC 42 H DG 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A 5CM 3 A 5CM 3 ? DC ? 2 B 5CM 3 B 5CM 9 ? DC ? 3 C 5CM 3 C 5CM 15 ? DC ? 4 D 5CM 3 D 5CM 21 ? DC ? 5 E 5CM 3 E 5CM 27 ? DC ? 6 F 5CM 3 F 5CM 33 ? DC ? 7 G 5CM 3 G 5CM 39 ? DC ? 8 H 5CM 3 H 5CM 45 ? DC ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 5CM N1 N N N 1 5CM C2 C N N 2 5CM N3 N N N 3 5CM C4 C N N 4 5CM C5 C N N 5 5CM C5A C N N 6 5CM C6 C N N 7 5CM O2 O N N 8 5CM N4 N N N 9 5CM "C1'" C N R 10 5CM "C2'" C N N 11 5CM "C3'" C N S 12 5CM "C4'" C N R 13 5CM "O4'" O N N 14 5CM "O3'" O N N 15 5CM "C5'" C N N 16 5CM "O5'" O N N 17 5CM P P N N 18 5CM OP1 O N N 19 5CM OP2 O N N 20 5CM OP3 O N N 21 5CM H5A1 H N N 22 5CM H5A2 H N N 23 5CM H5A3 H N N 24 5CM H6 H N N 25 5CM HN41 H N N 26 5CM HN42 H N N 27 5CM "H1'" H N N 28 5CM "H2'" H N N 29 5CM "H2''" H N N 30 5CM "H3'" H N N 31 5CM "H4'" H N N 32 5CM "HO3'" H N N 33 5CM "H5'" H N N 34 5CM "H5''" H N N 35 5CM HOP2 H N N 36 5CM HOP3 H N N 37 DC OP3 O N N 38 DC P P N N 39 DC OP1 O N N 40 DC OP2 O N N 41 DC "O5'" O N N 42 DC "C5'" C N N 43 DC "C4'" C N R 44 DC "O4'" O N N 45 DC "C3'" C N S 46 DC "O3'" O N N 47 DC "C2'" C N N 48 DC "C1'" C N R 49 DC N1 N N N 50 DC C2 C N N 51 DC O2 O N N 52 DC N3 N N N 53 DC C4 C N N 54 DC N4 N N N 55 DC C5 C N N 56 DC C6 C N N 57 DC HOP3 H N N 58 DC HOP2 H N N 59 DC "H5'" H N N 60 DC "H5''" H N N 61 DC "H4'" H N N 62 DC "H3'" H N N 63 DC "HO3'" H N N 64 DC "H2'" H N N 65 DC "H2''" H N N 66 DC "H1'" H N N 67 DC H41 H N N 68 DC H42 H N N 69 DC H5 H N N 70 DC H6 H N N 71 DG OP3 O N N 72 DG P P N N 73 DG OP1 O N N 74 DG OP2 O N N 75 DG "O5'" O N N 76 DG "C5'" C N N 77 DG "C4'" C N R 78 DG "O4'" O N N 79 DG "C3'" C N S 80 DG "O3'" O N N 81 DG "C2'" C N N 82 DG "C1'" C N R 83 DG N9 N Y N 84 DG C8 C Y N 85 DG N7 N Y N 86 DG C5 C Y N 87 DG C6 C N N 88 DG O6 O N N 89 DG N1 N N N 90 DG C2 C N N 91 DG N2 N N N 92 DG N3 N N N 93 DG C4 C Y N 94 DG HOP3 H N N 95 DG HOP2 H N N 96 DG "H5'" H N N 97 DG "H5''" H N N 98 DG "H4'" H N N 99 DG "H3'" H N N 100 DG "HO3'" H N N 101 DG "H2'" H N N 102 DG "H2''" H N N 103 DG "H1'" H N N 104 DG H8 H N N 105 DG H1 H N N 106 DG H21 H N N 107 DG H22 H N N 108 HOH O O N N 109 HOH H1 H N N 110 HOH H2 H N N 111 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5CM N1 C2 sing N N 1 5CM N1 C6 sing N N 2 5CM N1 "C1'" sing N N 3 5CM C2 N3 sing N N 4 5CM C2 O2 doub N N 5 5CM N3 C4 doub N N 6 5CM C4 C5 sing N N 7 5CM C4 N4 sing N N 8 5CM C5 C5A sing N N 9 5CM C5 C6 doub N N 10 5CM C5A H5A1 sing N N 11 5CM C5A H5A2 sing N N 12 5CM C5A H5A3 sing N N 13 5CM C6 H6 sing N N 14 5CM N4 HN41 sing N N 15 5CM N4 HN42 sing N N 16 5CM "C1'" "C2'" sing N N 17 5CM "C1'" "O4'" sing N N 18 5CM "C1'" "H1'" sing N N 19 5CM "C2'" "C3'" sing N N 20 5CM "C2'" "H2'" sing N N 21 5CM "C2'" "H2''" sing N N 22 5CM "C3'" "C4'" sing N N 23 5CM "C3'" "O3'" sing N N 24 5CM "C3'" "H3'" sing N N 25 5CM "C4'" "O4'" sing N N 26 5CM "C4'" "C5'" sing N N 27 5CM "C4'" "H4'" sing N N 28 5CM "O3'" "HO3'" sing N N 29 5CM "C5'" "O5'" sing N N 30 5CM "C5'" "H5'" sing N N 31 5CM "C5'" "H5''" sing N N 32 5CM "O5'" P sing N N 33 5CM P OP1 doub N N 34 5CM P OP2 sing N N 35 5CM P OP3 sing N N 36 5CM OP2 HOP2 sing N N 37 5CM OP3 HOP3 sing N N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 HOH O H1 sing N N 113 HOH O H2 sing N N 114 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1IH4 'double helix' 1IH4 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 1 1_555 B DC 6 1_555 -0.309 -0.107 -0.249 -9.645 2.513 0.213 1 A_DG1:DC12_B A 1 ? B 12 ? 19 1 1 A DG 2 1_555 B DC 5 1_555 -0.240 -0.141 -0.266 -9.523 -10.519 2.449 2 A_DG2:DC11_B A 2 ? B 11 ? 19 1 1 A 5CM 3 1_555 B DG 4 1_555 0.083 -0.225 0.009 -3.156 -9.326 -0.628 3 A_5CM3:DG10_B A 3 ? B 10 ? 19 1 1 A DG 4 1_555 B 5CM 3 1_555 -0.266 -0.180 -0.119 -3.613 -11.157 1.099 4 A_DG4:5CM9_B A 4 ? B 9 ? 19 1 1 A DC 5 1_555 B DG 2 1_555 0.260 -0.128 -0.153 2.269 -7.925 3.319 5 A_DC5:DG8_B A 5 ? B 8 ? 19 1 1 A DC 6 1_555 B DG 1 1_555 0.418 -0.199 -0.050 6.789 4.871 -2.713 6 A_DC6:DG7_B A 6 ? B 7 ? 19 1 1 C DG 1 1_555 D DC 6 1_555 -0.270 -0.114 -0.079 -5.759 0.890 0.316 7 C_DG13:DC24_D C 13 ? D 24 ? 19 1 1 C DG 2 1_555 D DC 5 1_555 -0.304 -0.131 0.029 1.331 -5.755 1.123 8 C_DG14:DC23_D C 14 ? D 23 ? 19 1 1 C 5CM 3 1_555 D DG 4 1_555 0.215 -0.159 -0.099 6.575 -13.867 -0.061 9 C_5CM15:DG22_D C 15 ? D 22 ? 19 1 1 C DG 4 1_555 D 5CM 3 1_555 -0.218 -0.155 -0.081 -4.629 -13.263 2.027 10 C_DG16:5CM21_D C 16 ? D 21 ? 19 1 1 C DC 5 1_555 D DG 2 1_555 0.276 -0.076 -0.038 2.997 -9.061 4.134 11 C_DC17:DG20_D C 17 ? D 20 ? 19 1 1 C DC 6 1_555 D DG 1 1_555 0.265 -0.079 -0.288 8.213 3.324 -0.085 12 C_DC18:DG19_D C 18 ? D 19 ? 19 1 1 E DG 1 1_555 F DC 6 1_555 -0.335 -0.093 -0.190 -5.231 0.280 1.476 13 E_DG25:DC36_F E 25 ? F 36 ? 19 1 1 E DG 2 1_555 F DC 5 1_555 -0.404 -0.164 -0.002 2.697 -3.414 1.049 14 E_DG26:DC35_F E 26 ? F 35 ? 19 1 1 E 5CM 3 1_555 F DG 4 1_555 0.187 -0.196 -0.188 6.573 -12.273 0.098 15 E_5CM27:DG34_F E 27 ? F 34 ? 19 1 1 E DG 4 1_555 F 5CM 3 1_555 -0.196 -0.133 -0.053 -5.091 -12.634 1.766 16 E_DG28:5CM33_F E 28 ? F 33 ? 19 1 1 E DC 5 1_555 F DG 2 1_555 0.321 -0.120 -0.118 -1.507 -8.816 5.912 17 E_DC29:DG32_F E 29 ? F 32 ? 19 1 1 E DC 6 1_555 F DG 1 1_555 0.298 -0.198 -0.047 5.785 6.376 -2.705 18 E_DC30:DG31_F E 30 ? F 31 ? 19 1 1 G DG 1 1_555 H DC 6 1_555 -0.342 -0.082 -0.328 -16.061 -4.258 -0.302 19 G_DG37:DC48_H G 37 ? H 48 ? 19 1 1 G DG 2 1_555 H DC 5 1_555 -0.505 -0.176 -0.282 -18.590 -10.485 0.627 20 G_DG38:DC47_H G 38 ? H 47 ? 19 1 1 G 5CM 3 1_555 H DG 4 1_555 0.443 -0.228 -0.001 -15.021 -3.090 1.585 21 G_5CM39:DG46_H G 39 ? H 46 ? 19 1 1 G DG 4 1_555 H 5CM 3 1_555 -0.209 -0.271 0.037 12.434 -2.738 -0.018 22 G_DG40:5CM45_H G 40 ? H 45 ? 19 1 1 G DC 5 1_555 H DG 2 1_555 0.182 -0.192 -0.114 14.411 -9.411 3.915 23 G_DC41:DG44_H G 41 ? H 44 ? 19 1 1 G DC 6 1_555 H DG 1 1_555 0.274 -0.163 -0.154 13.810 -9.410 -1.656 24 G_DC42:DG43_H G 42 ? H 43 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 1 1_555 B DC 6 1_555 A DG 2 1_555 B DC 5 1_555 0.503 -1.976 3.407 1.872 6.685 30.827 -4.852 -0.582 2.948 12.380 -3.466 31.581 1 AA_DG1DG2:DC11DC12_BB A 1 ? B 12 ? A 2 ? B 11 ? 1 A DG 2 1_555 B DC 5 1_555 A 5CM 3 1_555 B DG 4 1_555 -0.589 -1.550 3.224 -1.297 1.982 33.113 -3.038 0.818 3.148 3.472 2.272 33.195 2 AA_DG25CM3:DG10DC11_BB A 2 ? B 11 ? A 3 ? B 10 ? 1 A 5CM 3 1_555 B DG 4 1_555 A DG 4 1_555 B 5CM 3 1_555 0.437 -1.854 3.298 1.397 8.919 24.513 -6.333 -0.619 2.499 20.153 -3.157 26.099 3 AA_5CM3DG4:5CM9DG10_BB A 3 ? B 10 ? A 4 ? B 9 ? 1 A DG 4 1_555 B 5CM 3 1_555 A DC 5 1_555 B DG 2 1_555 0.483 -1.724 3.244 0.342 1.710 33.719 -3.240 -0.778 3.159 2.945 -0.589 33.763 4 AA_DG4DC5:DG85CM9_BB A 4 ? B 9 ? A 5 ? B 8 ? 1 A DC 5 1_555 B DG 2 1_555 A DC 6 1_555 B DG 1 1_555 -0.621 -2.024 3.312 -1.652 5.696 29.498 -5.021 0.872 2.908 11.046 3.204 30.076 5 AA_DC5DC6:DG7DG8_BB A 5 ? B 8 ? A 6 ? B 7 ? 1 C DG 1 1_555 D DC 6 1_555 C DG 2 1_555 D DC 5 1_555 -0.503 -1.686 3.290 -1.899 6.376 26.658 -5.046 0.614 2.846 13.561 4.038 27.461 6 CC_DG13DG14:DC23DC24_DD C 13 ? D 24 ? C 14 ? D 23 ? 1 C DG 2 1_555 D DC 5 1_555 C 5CM 3 1_555 D DG 4 1_555 -0.187 -1.309 3.260 1.343 4.253 34.831 -2.789 0.505 3.074 7.070 -2.232 35.107 7 CC_DG145CM15:DG22DC23_DD C 14 ? D 23 ? C 15 ? D 22 ? 1 C 5CM 3 1_555 D DG 4 1_555 C DG 4 1_555 D 5CM 3 1_555 0.452 -1.567 3.549 1.130 8.228 31.204 -4.323 -0.608 3.061 14.966 -2.056 32.264 8 CC_5CM15DG16:5CM21DG22_DD C 15 ? D 22 ? C 16 ? D 21 ? 1 C DG 4 1_555 D 5CM 3 1_555 C DC 5 1_555 D DG 2 1_555 0.639 -1.571 3.193 0.492 1.884 31.654 -3.209 -1.083 3.106 3.450 -0.901 31.713 9 CC_DG16DC17:DG205CM21_DD C 16 ? D 21 ? C 17 ? D 20 ? 1 C DC 5 1_555 D DG 2 1_555 C DC 6 1_555 D DG 1 1_555 -0.570 -1.942 3.246 0.027 4.071 30.386 -4.440 1.083 2.966 7.724 -0.050 30.652 10 CC_DC17DC18:DG19DG20_DD C 17 ? D 20 ? C 18 ? D 19 ? 1 E DG 1 1_555 F DC 6 1_555 E DG 2 1_555 F DC 5 1_555 -0.780 -2.110 3.262 -4.426 6.984 24.206 -6.619 0.590 2.657 16.066 10.183 25.559 11 EE_DG25DG26:DC35DC36_FF E 25 ? F 36 ? E 26 ? F 35 ? 1 E DG 2 1_555 F DC 5 1_555 E 5CM 3 1_555 F DG 4 1_555 -0.381 -1.515 3.299 0.259 6.207 35.021 -3.360 0.660 2.992 10.215 -0.426 35.551 12 EE_DG265CM27:DG34DC35_FF E 26 ? F 35 ? E 27 ? F 34 ? 1 E 5CM 3 1_555 F DG 4 1_555 E DG 4 1_555 F 5CM 3 1_555 0.421 -1.817 3.543 -0.777 10.967 28.419 -5.618 -0.955 2.662 21.356 1.513 30.431 13 EE_5CM27DG28:5CM33DG34_FF E 27 ? F 34 ? E 28 ? F 33 ? 1 E DG 4 1_555 F 5CM 3 1_555 E DC 5 1_555 F DG 2 1_555 0.561 -1.853 3.241 1.667 4.384 33.270 -3.895 -0.708 3.003 7.610 -2.893 33.590 14 EE_DG28DC29:DG325CM33_FF E 28 ? F 33 ? E 29 ? F 32 ? 1 E DC 5 1_555 F DG 2 1_555 E DC 6 1_555 F DG 1 1_555 -0.678 -1.942 3.249 -1.252 5.816 28.607 -5.039 1.089 2.833 11.611 2.499 29.206 15 EE_DC29DC30:DG31DG32_FF E 29 ? F 32 ? E 30 ? F 31 ? 1 G DG 1 1_555 H DC 6 1_555 G DG 2 1_555 H DC 5 1_555 0.591 -1.565 3.544 4.474 4.385 28.416 -4.137 -0.134 3.323 8.799 -8.976 29.084 16 GG_DG37DG38:DC47DC48_HH G 37 ? H 48 ? G 38 ? H 47 ? 1 G DG 2 1_555 H DC 5 1_555 G 5CM 3 1_555 H DG 4 1_555 -0.258 -1.079 3.364 2.753 -1.314 38.671 -1.459 0.735 3.372 -1.981 -4.149 38.786 17 GG_DG385CM39:DG46DC47_HH G 38 ? H 47 ? G 39 ? H 46 ? 1 G 5CM 3 1_555 H DG 4 1_555 G DG 4 1_555 H 5CM 3 1_555 0.013 -0.220 2.864 -0.161 6.098 24.432 -2.059 -0.070 2.729 14.130 0.372 25.170 18 GG_5CM39DG40:5CM45DG46_HH G 39 ? H 46 ? G 40 ? H 45 ? 1 G DG 4 1_555 H 5CM 3 1_555 G DC 5 1_555 H DG 2 1_555 0.204 -1.012 3.402 -3.165 -0.600 34.206 -1.616 -0.859 3.387 -1.017 5.367 34.353 19 GG_DG40DC41:DG445CM45_HH G 40 ? H 45 ? G 41 ? H 44 ? 1 G DC 5 1_555 H DG 2 1_555 G DC 6 1_555 H DG 1 1_555 -0.691 -1.232 3.431 -3.336 4.744 32.834 -2.964 0.631 3.278 8.312 5.845 33.328 20 GG_DC41DC42:DG43DG44_HH G 41 ? H 44 ? G 42 ? H 43 ? # _atom_sites.entry_id 1IH4 _atom_sites.fract_transf_matrix[1][1] 0.023847 _atom_sites.fract_transf_matrix[1][2] 0.013768 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.027536 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005659 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P # loop_