data_1JV5 # _entry.id 1JV5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.292 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1JV5 RCSB RCSB014218 WWPDB D_1000014218 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1JV5 _pdbx_database_status.recvd_initial_deposition_date 2001-08-28 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_sf REL _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Thomas, R.' 1 'Patenaude, S.I.' 2 'MacKenzie, C.R.' 3 'To, R.' 4 'Hirama, T.' 5 'Young, N.M.' 6 'Evans, S.V.' 7 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Structure of an anti-blood group A Fv and improvement of its binding affinity without loss of specificity.' J.Biol.Chem. 277 2059 2064 2002 JBCHA3 US 0021-9258 0071 ? 11679577 10.1074/jbc.M104364200 1 ;Production, crystallization and diffraction to atomic resolution of an antibody Fv specific for the blood-group A oligosaccharide antigen ; 'Acta Crystallogr.,Sect.D' 54 1456 1459 1998 ABCRE6 DK 0907-4449 0766 ? ? 10.1107/S0907444998005824 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Thomas, R.' 1 primary 'Patenaude, S.I.' 2 primary 'MacKenzie, C.R.' 3 primary 'To, R.' 4 primary 'Hirama, T.' 5 primary 'Young, N.M.' 6 primary 'Evans, S.V.' 7 1 'Patenaude, S.I.' 8 1 'MacKenzie, C.R.' 9 1 'Bilous, D.' 10 1 'To, R.J.' 11 1 'Ryan, S.E.' 12 1 'Young, N.M.' 13 1 'Evans, S.V.' 14 # _cell.entry_id 1JV5 _cell.length_a 51.71 _cell.length_b 57.96 _cell.length_c 83.58 _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1JV5 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Ig kappa chain precursor V region' 11809.013 1 ? ? 'anti-blood group A Fv' ? 2 polymer man 'Ig chain heavy chain precursor V region' 12877.354 1 ? ? ? ? 3 water nat water 18.015 62 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;DIQMTQTTSSLSASLGDRVTISCRASQDINNYLNWYQQKPDGTVKLLIHYTSRLHSGVPSRFSGSGSGTDYSLTISNLEQ EDIATYFCQQGNTLPWTFGGGTKLEIK ; ;DIQMTQTTSSLSASLGDRVTISCRASQDINNYLNWYQQKPDGTVKLLIHYTSRLHSGVPSRFSGSGSGTDYSLTISNLEQ EDIATYFCQQGNTLPWTFGGGTKLEIK ; A ? 2 'polypeptide(L)' no no ;QVQLQQPGAELVKPGTSVKLSCKASGYNFTSYWINWVKLRPGQGLEWIGDIYPGSGITNYNEKFKSKATLTVDTSSSTAY MQLSSLASEDSALYYCAGQYGNLWFAYWGQGTLVTVS ; ;QVQLQQPGAELVKPGTSVKLSCKASGYNFTSYWINWVKLRPGQGLEWIGDIYPGSGITNYNEKFKSKATLTVDTSSSTAY MQLSSLASEDSALYYCAGQYGNLWFAYWGQGTLVTVS ; B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 ILE n 1 3 GLN n 1 4 MET n 1 5 THR n 1 6 GLN n 1 7 THR n 1 8 THR n 1 9 SER n 1 10 SER n 1 11 LEU n 1 12 SER n 1 13 ALA n 1 14 SER n 1 15 LEU n 1 16 GLY n 1 17 ASP n 1 18 ARG n 1 19 VAL n 1 20 THR n 1 21 ILE n 1 22 SER n 1 23 CYS n 1 24 ARG n 1 25 ALA n 1 26 SER n 1 27 GLN n 1 28 ASP n 1 29 ILE n 1 30 ASN n 1 31 ASN n 1 32 TYR n 1 33 LEU n 1 34 ASN n 1 35 TRP n 1 36 TYR n 1 37 GLN n 1 38 GLN n 1 39 LYS n 1 40 PRO n 1 41 ASP n 1 42 GLY n 1 43 THR n 1 44 VAL n 1 45 LYS n 1 46 LEU n 1 47 LEU n 1 48 ILE n 1 49 HIS n 1 50 TYR n 1 51 THR n 1 52 SER n 1 53 ARG n 1 54 LEU n 1 55 HIS n 1 56 SER n 1 57 GLY n 1 58 VAL n 1 59 PRO n 1 60 SER n 1 61 ARG n 1 62 PHE n 1 63 SER n 1 64 GLY n 1 65 SER n 1 66 GLY n 1 67 SER n 1 68 GLY n 1 69 THR n 1 70 ASP n 1 71 TYR n 1 72 SER n 1 73 LEU n 1 74 THR n 1 75 ILE n 1 76 SER n 1 77 ASN n 1 78 LEU n 1 79 GLU n 1 80 GLN n 1 81 GLU n 1 82 ASP n 1 83 ILE n 1 84 ALA n 1 85 THR n 1 86 TYR n 1 87 PHE n 1 88 CYS n 1 89 GLN n 1 90 GLN n 1 91 GLY n 1 92 ASN n 1 93 THR n 1 94 LEU n 1 95 PRO n 1 96 TRP n 1 97 THR n 1 98 PHE n 1 99 GLY n 1 100 GLY n 1 101 GLY n 1 102 THR n 1 103 LYS n 1 104 LEU n 1 105 GLU n 1 106 ILE n 1 107 LYS n 2 1 GLN n 2 2 VAL n 2 3 GLN n 2 4 LEU n 2 5 GLN n 2 6 GLN n 2 7 PRO n 2 8 GLY n 2 9 ALA n 2 10 GLU n 2 11 LEU n 2 12 VAL n 2 13 LYS n 2 14 PRO n 2 15 GLY n 2 16 THR n 2 17 SER n 2 18 VAL n 2 19 LYS n 2 20 LEU n 2 21 SER n 2 22 CYS n 2 23 LYS n 2 24 ALA n 2 25 SER n 2 26 GLY n 2 27 TYR n 2 28 ASN n 2 29 PHE n 2 30 THR n 2 31 SER n 2 32 TYR n 2 33 TRP n 2 34 ILE n 2 35 ASN n 2 36 TRP n 2 37 VAL n 2 38 LYS n 2 39 LEU n 2 40 ARG n 2 41 PRO n 2 42 GLY n 2 43 GLN n 2 44 GLY n 2 45 LEU n 2 46 GLU n 2 47 TRP n 2 48 ILE n 2 49 GLY n 2 50 ASP n 2 51 ILE n 2 52 TYR n 2 53 PRO n 2 54 GLY n 2 55 SER n 2 56 GLY n 2 57 ILE n 2 58 THR n 2 59 ASN n 2 60 TYR n 2 61 ASN n 2 62 GLU n 2 63 LYS n 2 64 PHE n 2 65 LYS n 2 66 SER n 2 67 LYS n 2 68 ALA n 2 69 THR n 2 70 LEU n 2 71 THR n 2 72 VAL n 2 73 ASP n 2 74 THR n 2 75 SER n 2 76 SER n 2 77 SER n 2 78 THR n 2 79 ALA n 2 80 TYR n 2 81 MET n 2 82 GLN n 2 83 LEU n 2 84 SER n 2 85 SER n 2 86 LEU n 2 87 ALA n 2 88 SER n 2 89 GLU n 2 90 ASP n 2 91 SER n 2 92 ALA n 2 93 LEU n 2 94 TYR n 2 95 TYR n 2 96 CYS n 2 97 ALA n 2 98 GLY n 2 99 GLN n 2 100 TYR n 2 101 GLY n 2 102 ASN n 2 103 LEU n 2 104 TRP n 2 105 PHE n 2 106 ALA n 2 107 TYR n 2 108 TRP n 2 109 GLY n 2 110 GLN n 2 111 GLY n 2 112 THR n 2 113 LEU n 2 114 VAL n 2 115 THR n 2 116 VAL n 2 117 SER n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? human Homo ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 Escherichia ? ? ? ? ? TG1 ? ? ? ? ? ? ? ? ? ? ? pUCE8 ? ? 2 1 sample ? ? ? human Homo ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 Escherichia ? ? ? ? ? TG1 ? ? ? ? ? ? ? ? ? ? ? pUCE8 ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP KV1B_HUMAN 1 ;DIQMTQTTSSLSASLGDRVTISCRASQDINNYLNWYQQKPDGTVKLLIHYTSRLHSGVPSRFSGSGSGTDYSLTISNLEQ EDIATYFCQQGNTLPWTFGGGTKLEIK ; 15 P01594 ? 2 GB E29380 2 ;QVQLQQPGAELVKPGTSVKLSCKASGYNFTSYWINWVKLRPGQGLEWIGDIYPGSGITNYNEKFKSKATLTVDTSSSTAY MQLSSLASEDSALYYCAGQYGNLWFAYWGQGTLVTVS ; 20 90683 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1JV5 A 1 ? 107 ? P01594 15 ? 121 ? 1 107 2 2 1JV5 B 1 ? 117 ? 90683 20 ? 136 ? 301 417 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1JV5 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.54 _exptl_crystal.density_percent_sol 51.50 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 300 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details 'PEG 4000, HEPES, Calcium Chloride, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 300K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 300 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector DIFFRACTOMETER _diffrn_detector.type 'ENRAF-NONIUS FAST' _diffrn_detector.pdbx_collection_date 1994-10-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator graphite _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type ENRAF-NONIUS _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.54 # _reflns.entry_id 1JV5 _reflns.observed_criterion_sigma_I 1.5 _reflns.observed_criterion_sigma_F 3.0 _reflns.d_resolution_low 20.0 _reflns.d_resolution_high 2.2 _reflns.number_obs 12350 _reflns.number_all 12350 _reflns.percent_possible_obs 93.0 _reflns.pdbx_Rmerge_I_obs 0.1 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.2 _reflns_shell.d_res_low 2.31 _reflns_shell.percent_possible_all 71.8 _reflns_shell.Rmerge_I_obs 0.073 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 9.3 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 674 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1JV5 _refine.ls_number_reflns_obs 9440 _refine.ls_number_reflns_all 11626 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 3.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_d_res_low 6.0 _refine.ls_d_res_high 2.2 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.183 _refine.ls_R_factor_all 0.243 _refine.ls_R_factor_R_work 0.183 _refine.ls_R_factor_R_free 0.223 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 1266 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details random _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2145 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 186 _refine_hist.number_atoms_total 2331 _refine_hist.d_res_high 2.2 _refine_hist.d_res_low 6.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.006 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.412 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 2.20 _refine_ls_shell.d_res_low 3.21 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_work 0.203 _refine_ls_shell.percent_reflns_obs 71.8 _refine_ls_shell.R_factor_R_free 0.256 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 59 _refine_ls_shell.number_reflns_obs 674 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _struct.entry_id 1JV5 _struct.title 'Anti-blood group A Fv' _struct.pdbx_descriptor 'Anti-blood group A Fv, PROTEIN (117-MER)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1JV5 _struct_keywords.pdbx_keywords 'Immune System, Sugar Binding Protein' _struct_keywords.text 'immunoglobulin, Immune System, Sugar Binding Protein' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 2 ASN B 28 ? TYR B 32 ? ASN B 328 TYR B 332 5 ? 5 HELX_P HELX_P2 3 ALA B 87 ? SER B 91 ? ALA B 387 SER B 391 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 23 SG ? ? ? 1_555 A CYS 88 SG ? ? A CYS 23 A CYS 88 1_555 ? ? ? ? ? ? ? 2.028 ? disulf2 disulf ? ? B CYS 22 SG ? ? ? 1_555 B CYS 96 SG ? ? B CYS 322 B CYS 396 1_555 ? ? ? ? ? ? ? 2.028 ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id LEU _struct_mon_prot_cis.label_seq_id 94 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id LEU _struct_mon_prot_cis.auth_seq_id 94 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 95 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 95 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 0.02 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 5 ? C ? 6 ? D ? 4 ? E ? 5 ? F ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel C 5 6 ? parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel E 4 5 ? anti-parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel F 3 4 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 MET A 4 ? THR A 5 ? MET A 4 THR A 5 A 2 VAL A 19 ? ALA A 25 ? VAL A 19 ALA A 25 A 3 ASP A 70 ? ILE A 75 ? ASP A 70 ILE A 75 A 4 PHE A 62 ? SER A 67 ? PHE A 62 SER A 67 B 1 ARG A 53 ? LEU A 54 ? ARG A 53 LEU A 54 B 2 VAL A 44 ? HIS A 49 ? VAL A 44 HIS A 49 B 3 LEU A 33 ? GLN A 38 ? LEU A 33 GLN A 38 B 4 THR A 85 ? GLN A 90 ? THR A 85 GLN A 90 B 5 THR A 97 ? PHE A 98 ? THR A 97 PHE A 98 C 1 ARG A 53 ? LEU A 54 ? ARG A 53 LEU A 54 C 2 VAL A 44 ? HIS A 49 ? VAL A 44 HIS A 49 C 3 LEU A 33 ? GLN A 38 ? LEU A 33 GLN A 38 C 4 THR A 85 ? GLN A 90 ? THR A 85 GLN A 90 C 5 THR A 102 ? ILE A 106 ? THR A 102 ILE A 106 C 6 SER A 10 ? ALA A 13 ? SER A 10 ALA A 13 D 1 LEU B 4 ? GLN B 5 ? LEU B 304 GLN B 305 D 2 VAL B 18 ? ALA B 24 ? VAL B 318 ALA B 324 D 3 THR B 78 ? LEU B 83 ? THR B 378 LEU B 383 D 4 ALA B 68 ? ASP B 73 ? ALA B 368 ASP B 373 E 1 LEU B 103 ? TRP B 108 ? LEU B 403 TRP B 408 E 2 ALA B 92 ? TYR B 100 ? ALA B 392 TYR B 400 E 3 ILE B 34 ? LEU B 39 ? ILE B 334 LEU B 339 E 4 LEU B 45 ? ILE B 51 ? LEU B 345 ILE B 351 E 5 THR B 58 ? TYR B 60 ? THR B 358 TYR B 360 F 1 LEU B 103 ? TRP B 108 ? LEU B 403 TRP B 408 F 2 ALA B 92 ? TYR B 100 ? ALA B 392 TYR B 400 F 3 THR B 112 ? VAL B 116 ? THR B 412 VAL B 416 F 4 ALA B 9 ? VAL B 12 ? ALA B 309 VAL B 312 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N THR A 5 ? N THR A 5 O ARG A 24 ? O ARG A 24 A 2 3 N CYS A 23 ? N CYS A 23 O TYR A 71 ? O TYR A 71 A 3 4 O THR A 74 ? O THR A 74 N SER A 63 ? N SER A 63 B 1 2 O ARG A 53 ? O ARG A 53 N HIS A 49 ? N HIS A 49 B 2 3 O LEU A 47 ? O LEU A 47 N TRP A 35 ? N TRP A 35 B 3 4 N TYR A 36 ? N TYR A 36 O PHE A 87 ? O PHE A 87 B 4 5 N GLN A 90 ? N GLN A 90 O THR A 97 ? O THR A 97 C 1 2 O ARG A 53 ? O ARG A 53 N HIS A 49 ? N HIS A 49 C 2 3 O LEU A 47 ? O LEU A 47 N TRP A 35 ? N TRP A 35 C 3 4 N TYR A 36 ? N TYR A 36 O PHE A 87 ? O PHE A 87 C 4 5 N TYR A 86 ? N TYR A 86 O THR A 102 ? O THR A 102 C 5 6 O LYS A 103 ? O LYS A 103 N LEU A 11 ? N LEU A 11 D 1 2 N GLN B 5 ? N GLN B 305 O LYS B 23 ? O LYS B 323 D 2 3 N CYS B 22 ? N CYS B 322 O ALA B 79 ? O ALA B 379 D 3 4 O TYR B 80 ? O TYR B 380 N THR B 71 ? N THR B 371 E 1 2 O TYR B 107 ? O TYR B 407 N GLY B 98 ? N GLY B 398 E 2 3 O ALA B 97 ? O ALA B 397 N ASN B 35 ? N ASN B 335 E 3 4 N TRP B 36 ? N TRP B 336 O ILE B 48 ? O ILE B 348 E 4 5 N ASP B 50 ? N ASP B 350 O ASN B 59 ? O ASN B 359 F 1 2 O TYR B 107 ? O TYR B 407 N GLY B 98 ? N GLY B 398 F 2 3 N ALA B 92 ? N ALA B 392 O VAL B 114 ? O VAL B 414 F 3 4 O THR B 115 ? O THR B 415 N VAL B 12 ? N VAL B 312 # _database_PDB_matrix.entry_id 1JV5 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1JV5 _atom_sites.fract_transf_matrix[1][1] 0.019339 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017253 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011965 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 1 1 ASP ASP A . n A 1 2 ILE 2 2 2 ILE ILE A . n A 1 3 GLN 3 3 3 GLN GLN A . n A 1 4 MET 4 4 4 MET MET A . n A 1 5 THR 5 5 5 THR THR A . n A 1 6 GLN 6 6 6 GLN GLN A . n A 1 7 THR 7 7 7 THR THR A . n A 1 8 THR 8 8 8 THR THR A . n A 1 9 SER 9 9 9 SER SER A . n A 1 10 SER 10 10 10 SER SER A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 SER 12 12 12 SER SER A . n A 1 13 ALA 13 13 13 ALA ALA A . n A 1 14 SER 14 14 14 SER SER A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 ASP 17 17 17 ASP ASP A . n A 1 18 ARG 18 18 18 ARG ARG A . n A 1 19 VAL 19 19 19 VAL VAL A . n A 1 20 THR 20 20 20 THR THR A . n A 1 21 ILE 21 21 21 ILE ILE A . n A 1 22 SER 22 22 22 SER SER A . n A 1 23 CYS 23 23 23 CYS CYS A . n A 1 24 ARG 24 24 24 ARG ARG A . n A 1 25 ALA 25 25 25 ALA ALA A . n A 1 26 SER 26 26 26 SER SER A . n A 1 27 GLN 27 27 27 GLN GLN A . n A 1 28 ASP 28 28 28 ASP ASP A . n A 1 29 ILE 29 29 29 ILE ILE A . n A 1 30 ASN 30 30 30 ASN ASN A . n A 1 31 ASN 31 31 31 ASN ASN A . n A 1 32 TYR 32 32 32 TYR TYR A . n A 1 33 LEU 33 33 33 LEU LEU A . n A 1 34 ASN 34 34 34 ASN ASN A . n A 1 35 TRP 35 35 35 TRP TRP A . n A 1 36 TYR 36 36 36 TYR TYR A . n A 1 37 GLN 37 37 37 GLN GLN A . n A 1 38 GLN 38 38 38 GLN GLN A . n A 1 39 LYS 39 39 39 LYS LYS A . n A 1 40 PRO 40 40 40 PRO PRO A . n A 1 41 ASP 41 41 41 ASP ASP A . n A 1 42 GLY 42 42 42 GLY GLY A . n A 1 43 THR 43 43 43 THR THR A . n A 1 44 VAL 44 44 44 VAL VAL A . n A 1 45 LYS 45 45 45 LYS LYS A . n A 1 46 LEU 46 46 46 LEU LEU A . n A 1 47 LEU 47 47 47 LEU LEU A . n A 1 48 ILE 48 48 48 ILE ILE A . n A 1 49 HIS 49 49 49 HIS HIS A . n A 1 50 TYR 50 50 50 TYR TYR A . n A 1 51 THR 51 51 51 THR THR A . n A 1 52 SER 52 52 52 SER SER A . n A 1 53 ARG 53 53 53 ARG ARG A . n A 1 54 LEU 54 54 54 LEU LEU A . n A 1 55 HIS 55 55 55 HIS HIS A . n A 1 56 SER 56 56 56 SER SER A . n A 1 57 GLY 57 57 57 GLY GLY A . n A 1 58 VAL 58 58 58 VAL VAL A . n A 1 59 PRO 59 59 59 PRO PRO A . n A 1 60 SER 60 60 60 SER SER A . n A 1 61 ARG 61 61 61 ARG ARG A . n A 1 62 PHE 62 62 62 PHE PHE A . n A 1 63 SER 63 63 63 SER SER A . n A 1 64 GLY 64 64 64 GLY GLY A . n A 1 65 SER 65 65 65 SER SER A . n A 1 66 GLY 66 66 66 GLY GLY A . n A 1 67 SER 67 67 67 SER SER A . n A 1 68 GLY 68 68 68 GLY GLY A . n A 1 69 THR 69 69 69 THR THR A . n A 1 70 ASP 70 70 70 ASP ASP A . n A 1 71 TYR 71 71 71 TYR TYR A . n A 1 72 SER 72 72 72 SER SER A . n A 1 73 LEU 73 73 73 LEU LEU A . n A 1 74 THR 74 74 74 THR THR A . n A 1 75 ILE 75 75 75 ILE ILE A . n A 1 76 SER 76 76 76 SER SER A . n A 1 77 ASN 77 77 77 ASN ASN A . n A 1 78 LEU 78 78 78 LEU LEU A . n A 1 79 GLU 79 79 79 GLU GLU A . n A 1 80 GLN 80 80 80 GLN GLN A . n A 1 81 GLU 81 81 81 GLU GLU A . n A 1 82 ASP 82 82 82 ASP ASP A . n A 1 83 ILE 83 83 83 ILE ILE A . n A 1 84 ALA 84 84 84 ALA ALA A . n A 1 85 THR 85 85 85 THR THR A . n A 1 86 TYR 86 86 86 TYR TYR A . n A 1 87 PHE 87 87 87 PHE PHE A . n A 1 88 CYS 88 88 88 CYS CYS A . n A 1 89 GLN 89 89 89 GLN GLN A . n A 1 90 GLN 90 90 90 GLN GLN A . n A 1 91 GLY 91 91 91 GLY GLY A . n A 1 92 ASN 92 92 92 ASN ASN A . n A 1 93 THR 93 93 93 THR THR A . n A 1 94 LEU 94 94 94 LEU LEU A . n A 1 95 PRO 95 95 95 PRO PRO A . n A 1 96 TRP 96 96 96 TRP TRP A . n A 1 97 THR 97 97 97 THR THR A . n A 1 98 PHE 98 98 98 PHE PHE A . n A 1 99 GLY 99 99 99 GLY GLY A . n A 1 100 GLY 100 100 100 GLY GLY A . n A 1 101 GLY 101 101 101 GLY GLY A . n A 1 102 THR 102 102 102 THR THR A . n A 1 103 LYS 103 103 103 LYS LYS A . n A 1 104 LEU 104 104 104 LEU LEU A . n A 1 105 GLU 105 105 105 GLU GLU A . n A 1 106 ILE 106 106 106 ILE ILE A . n A 1 107 LYS 107 107 107 LYS LYS A . n B 2 1 GLN 1 301 301 GLN GLN B . n B 2 2 VAL 2 302 302 VAL VAL B . n B 2 3 GLN 3 303 303 GLN GLN B . n B 2 4 LEU 4 304 304 LEU LEU B . n B 2 5 GLN 5 305 305 GLN GLN B . n B 2 6 GLN 6 306 306 GLN GLN B . n B 2 7 PRO 7 307 307 PRO PRO B . n B 2 8 GLY 8 308 308 GLY GLY B . n B 2 9 ALA 9 309 309 ALA ALA B . n B 2 10 GLU 10 310 310 GLU GLU B . n B 2 11 LEU 11 311 311 LEU LEU B . n B 2 12 VAL 12 312 312 VAL VAL B . n B 2 13 LYS 13 313 313 LYS LYS B . n B 2 14 PRO 14 314 314 PRO PRO B . n B 2 15 GLY 15 315 315 GLY GLY B . n B 2 16 THR 16 316 316 THR THR B . n B 2 17 SER 17 317 317 SER SER B . n B 2 18 VAL 18 318 318 VAL VAL B . n B 2 19 LYS 19 319 319 LYS LYS B . n B 2 20 LEU 20 320 320 LEU LEU B . n B 2 21 SER 21 321 321 SER SER B . n B 2 22 CYS 22 322 322 CYS CYS B . n B 2 23 LYS 23 323 323 LYS LYS B . n B 2 24 ALA 24 324 324 ALA ALA B . n B 2 25 SER 25 325 325 SER SER B . n B 2 26 GLY 26 326 326 GLY GLY B . n B 2 27 TYR 27 327 327 TYR TYR B . n B 2 28 ASN 28 328 328 ASN ASN B . n B 2 29 PHE 29 329 329 PHE PHE B . n B 2 30 THR 30 330 330 THR THR B . n B 2 31 SER 31 331 331 SER SER B . n B 2 32 TYR 32 332 332 TYR TYR B . n B 2 33 TRP 33 333 333 TRP TRP B . n B 2 34 ILE 34 334 334 ILE ILE B . n B 2 35 ASN 35 335 335 ASN ASN B . n B 2 36 TRP 36 336 336 TRP TRP B . n B 2 37 VAL 37 337 337 VAL VAL B . n B 2 38 LYS 38 338 338 LYS LYS B . n B 2 39 LEU 39 339 339 LEU LEU B . n B 2 40 ARG 40 340 340 ARG ARG B . n B 2 41 PRO 41 341 341 PRO PRO B . n B 2 42 GLY 42 342 342 GLY GLY B . n B 2 43 GLN 43 343 343 GLN GLN B . n B 2 44 GLY 44 344 344 GLY GLY B . n B 2 45 LEU 45 345 345 LEU LEU B . n B 2 46 GLU 46 346 346 GLU GLU B . n B 2 47 TRP 47 347 347 TRP TRP B . n B 2 48 ILE 48 348 348 ILE ILE B . n B 2 49 GLY 49 349 349 GLY GLY B . n B 2 50 ASP 50 350 350 ASP ASP B . n B 2 51 ILE 51 351 351 ILE ILE B . n B 2 52 TYR 52 352 352 TYR TYR B . n B 2 53 PRO 53 353 353 PRO PRO B . n B 2 54 GLY 54 354 354 GLY GLY B . n B 2 55 SER 55 355 355 SER SER B . n B 2 56 GLY 56 356 356 GLY GLY B . n B 2 57 ILE 57 357 357 ILE ILE B . n B 2 58 THR 58 358 358 THR THR B . n B 2 59 ASN 59 359 359 ASN ASN B . n B 2 60 TYR 60 360 360 TYR TYR B . n B 2 61 ASN 61 361 361 ASN ASN B . n B 2 62 GLU 62 362 362 GLU GLU B . n B 2 63 LYS 63 363 363 LYS LYS B . n B 2 64 PHE 64 364 364 PHE PHE B . n B 2 65 LYS 65 365 365 LYS LYS B . n B 2 66 SER 66 366 366 SER SER B . n B 2 67 LYS 67 367 367 LYS LYS B . n B 2 68 ALA 68 368 368 ALA ALA B . n B 2 69 THR 69 369 369 THR THR B . n B 2 70 LEU 70 370 370 LEU LEU B . n B 2 71 THR 71 371 371 THR THR B . n B 2 72 VAL 72 372 372 VAL VAL B . n B 2 73 ASP 73 373 373 ASP ASP B . n B 2 74 THR 74 374 374 THR THR B . n B 2 75 SER 75 375 375 SER SER B . n B 2 76 SER 76 376 376 SER SER B . n B 2 77 SER 77 377 377 SER SER B . n B 2 78 THR 78 378 378 THR THR B . n B 2 79 ALA 79 379 379 ALA ALA B . n B 2 80 TYR 80 380 380 TYR TYR B . n B 2 81 MET 81 381 381 MET MET B . n B 2 82 GLN 82 382 382 GLN GLN B . n B 2 83 LEU 83 383 383 LEU LEU B . n B 2 84 SER 84 384 384 SER SER B . n B 2 85 SER 85 385 385 SER SER B . n B 2 86 LEU 86 386 386 LEU LEU B . n B 2 87 ALA 87 387 387 ALA ALA B . n B 2 88 SER 88 388 388 SER SER B . n B 2 89 GLU 89 389 389 GLU GLU B . n B 2 90 ASP 90 390 390 ASP ASP B . n B 2 91 SER 91 391 391 SER SER B . n B 2 92 ALA 92 392 392 ALA ALA B . n B 2 93 LEU 93 393 393 LEU LEU B . n B 2 94 TYR 94 394 394 TYR TYR B . n B 2 95 TYR 95 395 395 TYR TYR B . n B 2 96 CYS 96 396 396 CYS CYS B . n B 2 97 ALA 97 397 397 ALA ALA B . n B 2 98 GLY 98 398 398 GLY GLY B . n B 2 99 GLN 99 399 399 GLN GLN B . n B 2 100 TYR 100 400 400 TYR TYR B . n B 2 101 GLY 101 401 401 GLY GLY B . n B 2 102 ASN 102 402 402 ASN ASN B . n B 2 103 LEU 103 403 403 LEU LEU B . n B 2 104 TRP 104 404 404 TRP TRP B . n B 2 105 PHE 105 405 405 PHE PHE B . n B 2 106 ALA 106 406 406 ALA ALA B . n B 2 107 TYR 107 407 407 TYR TYR B . n B 2 108 TRP 108 408 408 TRP TRP B . n B 2 109 GLY 109 409 409 GLY GLY B . n B 2 110 GLN 110 410 410 GLN GLN B . n B 2 111 GLY 111 411 411 GLY GLY B . n B 2 112 THR 112 412 412 THR THR B . n B 2 113 LEU 113 413 413 LEU LEU B . n B 2 114 VAL 114 414 414 VAL VAL B . n B 2 115 THR 115 415 415 THR THR B . n B 2 116 VAL 116 416 416 VAL VAL B . n B 2 117 SER 117 417 417 SER SER B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HOH 1 802 802 HOH TIP A . C 3 HOH 2 803 803 HOH TIP A . C 3 HOH 3 805 805 HOH TIP A . C 3 HOH 4 806 806 HOH TIP A . C 3 HOH 5 807 807 HOH TIP A . C 3 HOH 6 808 808 HOH TIP A . C 3 HOH 7 809 809 HOH TIP A . C 3 HOH 8 811 811 HOH TIP A . C 3 HOH 9 812 812 HOH TIP A . C 3 HOH 10 813 813 HOH TIP A . C 3 HOH 11 814 814 HOH TIP A . C 3 HOH 12 816 816 HOH TIP A . C 3 HOH 13 817 817 HOH TIP A . C 3 HOH 14 818 818 HOH TIP A . C 3 HOH 15 819 819 HOH TIP A . C 3 HOH 16 823 823 HOH TIP A . C 3 HOH 17 827 827 HOH TIP A . C 3 HOH 18 828 828 HOH TIP A . C 3 HOH 19 838 838 HOH TIP A . C 3 HOH 20 840 840 HOH TIP A . C 3 HOH 21 841 841 HOH TIP A . C 3 HOH 22 842 842 HOH TIP A . C 3 HOH 23 843 843 HOH TIP A . C 3 HOH 24 844 844 HOH TIP A . C 3 HOH 25 845 845 HOH TIP A . C 3 HOH 26 846 846 HOH TIP A . C 3 HOH 27 847 847 HOH TIP A . C 3 HOH 28 848 848 HOH TIP A . C 3 HOH 29 851 851 HOH TIP A . C 3 HOH 30 852 852 HOH TIP A . C 3 HOH 31 853 853 HOH TIP A . C 3 HOH 32 854 854 HOH TIP A . C 3 HOH 33 855 855 HOH TIP A . C 3 HOH 34 856 856 HOH TIP A . C 3 HOH 35 857 857 HOH TIP A . C 3 HOH 36 858 858 HOH TIP A . C 3 HOH 37 859 859 HOH TIP A . D 3 HOH 1 801 801 HOH TIP B . D 3 HOH 2 804 804 HOH TIP B . D 3 HOH 3 810 810 HOH TIP B . D 3 HOH 4 815 815 HOH TIP B . D 3 HOH 5 820 820 HOH TIP B . D 3 HOH 6 821 821 HOH TIP B . D 3 HOH 7 822 822 HOH TIP B . D 3 HOH 8 824 824 HOH TIP B . D 3 HOH 9 825 825 HOH TIP B . D 3 HOH 10 826 826 HOH TIP B . D 3 HOH 11 829 829 HOH TIP B . D 3 HOH 12 830 830 HOH TIP B . D 3 HOH 13 831 831 HOH TIP B . D 3 HOH 14 832 832 HOH TIP B . D 3 HOH 15 833 833 HOH TIP B . D 3 HOH 16 834 834 HOH TIP B . D 3 HOH 17 835 835 HOH TIP B . D 3 HOH 18 836 836 HOH TIP B . D 3 HOH 19 837 837 HOH TIP B . D 3 HOH 20 839 839 HOH TIP B . D 3 HOH 21 849 849 HOH TIP B . D 3 HOH 22 850 850 HOH TIP B . D 3 HOH 23 860 860 HOH TIP B . D 3 HOH 24 861 861 HOH TIP B . D 3 HOH 25 862 862 HOH TIP B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1450 ? 1 MORE -10 ? 1 'SSA (A^2)' 10340 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2002-01-09 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-04 5 'Structure model' 1 4 2018-04-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Refinement description' 4 5 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' diffrn_detector # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.name' 2 5 'Structure model' '_diffrn_detector.detector' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CAD4 'data collection' . ? 1 ROTAVATA 'data reduction' . ? 2 MERLOT phasing . ? 3 X-PLOR refinement 3.1 ? 4 CAD4 'data reduction' . ? 5 CCP4 'data scaling' '(AGROVATA' ? 6 ROTAVATA 'data scaling' . ? 7 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 47 ? ? -100.71 -62.68 2 1 THR A 51 ? ? 74.90 -51.57 3 1 ALA A 84 ? ? -171.18 -167.38 4 1 SER B 325 ? ? -105.35 -96.06 5 1 GLU B 362 ? ? -54.77 -6.33 6 1 TYR B 400 ? ? -172.77 137.03 # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #