data_1JZF # _entry.id 1JZF # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1JZF RCSB RCSB014367 WWPDB D_1000014367 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1JZE 'Pseudomonas aeruginosa Azurin Ru(bpy)2(im)(His83)' unspecified PDB 1JZG 'Pseudomonas aeruginosa Reduced Azurin (Cu1+) Ru(tpy)(phen)(His83)' unspecified PDB 1JZH 'Pseudomonas aeruginosa Azurin Ru(tpy)(bpy)(His83)' unspecified PDB 1JZI 'Pseudomonas aeruginosa Azurin Re(phen)(CO)3(His83)' unspecified PDB 1JZJ 'Pseudomonas aeruginosa Azurin Os(bpy)2(im)(His83)' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1JZF _pdbx_database_status.recvd_initial_deposition_date 2001-09-16 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Crane, B.R.' 1 'Di Bilio, A.J.' 2 'Winkler, J.R.' 3 'Gray, H.B.' 4 # _citation.id primary _citation.title 'Electron tunneling in single crystals of Pseudomonas aeruginosa azurins.' _citation.journal_abbrev J.Am.Chem.Soc. _citation.journal_volume 123 _citation.page_first 11623 _citation.page_last 11631 _citation.year 2001 _citation.journal_id_ASTM JACSAT _citation.country US _citation.journal_id_ISSN 0002-7863 _citation.journal_id_CSD 0004 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 11716717 _citation.pdbx_database_id_DOI 10.1021/ja0115870 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Crane, B.R.' 1 primary 'Di Bilio, A.J.' 2 primary 'Winkler, J.R.' 3 primary 'Gray, H.B.' 4 # _cell.entry_id 1JZF _cell.length_a 52.776 _cell.length_b 61.441 _cell.length_c 75.956 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1JZF _symmetry.space_group_name_H-M 'I 2 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man AZURIN 13961.799 1 ? ? ? ? 2 non-polymer syn 'COPPER (II) ION' 63.546 1 ? ? ? ? 3 non-polymer syn ;(2,2':6',2'-TERPYRIDINE)-(1,10-PHENANTHROLINE) RUTHENIUM (II) ; 514.543 1 ? ? ? ? 4 non-polymer syn 'TETRA(IMIDAZOLE)DIAQUACOPPER (II)' 367.854 1 ? ? ? ? 5 water nat water 18.015 174 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;AECSVDIQGNDQMQFNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRV IAHTKLIGSGEKDSVTFDVSKLKEGEQYMFFCTFPGHSALMKGTLTLK ; _entity_poly.pdbx_seq_one_letter_code_can ;AECSVDIQGNDQMQFNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRV IAHTKLIGSGEKDSVTFDVSKLKEGEQYMFFCTFPGHSALMKGTLTLK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 GLU n 1 3 CYS n 1 4 SER n 1 5 VAL n 1 6 ASP n 1 7 ILE n 1 8 GLN n 1 9 GLY n 1 10 ASN n 1 11 ASP n 1 12 GLN n 1 13 MET n 1 14 GLN n 1 15 PHE n 1 16 ASN n 1 17 THR n 1 18 ASN n 1 19 ALA n 1 20 ILE n 1 21 THR n 1 22 VAL n 1 23 ASP n 1 24 LYS n 1 25 SER n 1 26 CYS n 1 27 LYS n 1 28 GLN n 1 29 PHE n 1 30 THR n 1 31 VAL n 1 32 ASN n 1 33 LEU n 1 34 SER n 1 35 HIS n 1 36 PRO n 1 37 GLY n 1 38 ASN n 1 39 LEU n 1 40 PRO n 1 41 LYS n 1 42 ASN n 1 43 VAL n 1 44 MET n 1 45 GLY n 1 46 HIS n 1 47 ASN n 1 48 TRP n 1 49 VAL n 1 50 LEU n 1 51 SER n 1 52 THR n 1 53 ALA n 1 54 ALA n 1 55 ASP n 1 56 MET n 1 57 GLN n 1 58 GLY n 1 59 VAL n 1 60 VAL n 1 61 THR n 1 62 ASP n 1 63 GLY n 1 64 MET n 1 65 ALA n 1 66 SER n 1 67 GLY n 1 68 LEU n 1 69 ASP n 1 70 LYS n 1 71 ASP n 1 72 TYR n 1 73 LEU n 1 74 LYS n 1 75 PRO n 1 76 ASP n 1 77 ASP n 1 78 SER n 1 79 ARG n 1 80 VAL n 1 81 ILE n 1 82 ALA n 1 83 HIS n 1 84 THR n 1 85 LYS n 1 86 LEU n 1 87 ILE n 1 88 GLY n 1 89 SER n 1 90 GLY n 1 91 GLU n 1 92 LYS n 1 93 ASP n 1 94 SER n 1 95 VAL n 1 96 THR n 1 97 PHE n 1 98 ASP n 1 99 VAL n 1 100 SER n 1 101 LYS n 1 102 LEU n 1 103 LYS n 1 104 GLU n 1 105 GLY n 1 106 GLU n 1 107 GLN n 1 108 TYR n 1 109 MET n 1 110 PHE n 1 111 PHE n 1 112 CYS n 1 113 THR n 1 114 PHE n 1 115 PRO n 1 116 GLY n 1 117 HIS n 1 118 SER n 1 119 ALA n 1 120 LEU n 1 121 MET n 1 122 LYS n 1 123 GLY n 1 124 THR n 1 125 LEU n 1 126 THR n 1 127 LEU n 1 128 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Pseudomonas _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Pseudomonas aeruginosa' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 287 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type 'Pet9a(ASA)' _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code AZUR_PSEAE _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;AECSVDIQGNDQMQFNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRV IAHTKLIGSGEKDSVTFDVSKLKEGEQYMFFCTFPGHSALMKGTLTLK ; _struct_ref.pdbx_align_begin 21 _struct_ref.pdbx_db_accession P00282 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1JZF _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 128 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P00282 _struct_ref_seq.db_align_beg 21 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 148 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 128 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CU non-polymer . 'COPPER (II) ION' ? 'Cu 2' 63.546 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 IME non-polymer . 'TETRA(IMIDAZOLE)DIAQUACOPPER (II)' ? 'C12 H16 Cu N8 O2 2' 367.854 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 RTB non-polymer . ;(2,2':6',2'-TERPYRIDINE)-(1,10-PHENANTHROLINE) RUTHENIUM (II) ; ? 'C27 H19 N5 Ru 2' 514.543 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1JZF _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.20 _exptl_crystal.density_percent_sol 44.20 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details 'PEG, Imidazole, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2000-06-05 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Double Si' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.03 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRL BEAMLINE BL9-2' _diffrn_source.pdbx_synchrotron_site SSRL _diffrn_source.pdbx_synchrotron_beamline BL9-2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.03 # _reflns.entry_id 1JZF _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 20.0 _reflns.d_resolution_high 1.50 _reflns.number_obs 19968 _reflns.number_all 19968 _reflns.percent_possible_obs 98.4 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.038 _reflns.pdbx_netI_over_sigmaI 32 _reflns.B_iso_Wilson_estimate 14.3 _reflns.pdbx_redundancy 3.6 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.50 _reflns_shell.d_res_low 1.55 _reflns_shell.percent_possible_all 98.9 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.153 _reflns_shell.meanI_over_sigI_obs 0.118 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1919 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1JZF _refine.ls_number_reflns_obs 19638 _refine.ls_number_reflns_all 19638 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 641862.45 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.ls_d_res_low 19.78 _refine.ls_d_res_high 1.50 _refine.ls_percent_reflns_obs 97.6 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.218 _refine.ls_R_factor_R_free 0.22 _refine.ls_R_factor_R_free_error 0.006 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 7.8 _refine.ls_number_reflns_R_free 1539 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 15.9 _refine.aniso_B[1][1] -2.06 _refine.aniso_B[2][2] 0.20 _refine.aniso_B[3][3] 1.85 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.352409 _refine.solvent_model_param_bsol 25.9323 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1JZF _refine_analyze.Luzzati_coordinate_error_obs 0.19 _refine_analyze.Luzzati_sigma_a_obs 0.12 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.20 _refine_analyze.Luzzati_sigma_a_free 0.14 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1015 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 46 _refine_hist.number_atoms_solvent 174 _refine_hist.number_atoms_total 1235 _refine_hist.d_res_high 1.50 _refine_hist.d_res_low 19.78 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.014 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.4 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 25.2 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 1.03 ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 0.30 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 0.55 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 0.35 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 0.56 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 10 _refine_ls_shell.d_res_high 1.50 _refine_ls_shell.d_res_low 1.55 _refine_ls_shell.number_reflns_R_work 1680 _refine_ls_shell.R_factor_R_work 0.249 _refine_ls_shell.percent_reflns_obs 97.2 _refine_ls_shell.R_factor_R_free 0.259 _refine_ls_shell.R_factor_R_free_error 0.021 _refine_ls_shell.percent_reflns_R_free 8.5 _refine_ls_shell.number_reflns_R_free 157 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 PARAM19X.HEME WATER.TOP 'X-RAY DIFFRACTION' 3 RUPHEN.PAR RUPHEN.TOP 'X-RAY DIFFRACTION' 4 WATER.PARAM TOPH19X.HEME 'X-RAY DIFFRACTION' # _struct.entry_id 1JZF _struct.title 'Pseudomonas aeruginosa Oxidized Azurin(Cu2+) Ru(tpy)(phen)(His83)' _struct.pdbx_descriptor AZURIN _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1JZF _struct_keywords.pdbx_keywords 'ELECTRON TRANSPORT' _struct_keywords.text 'Blue-copper, Electron Transfer, Tunneling, Ruthenium, Cu2+, ELECTRON TRANSPORT' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # _struct_biol.id 1 _struct_biol.details 'The biological assembly is a monomer' _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 40 ? GLY A 45 ? PRO A 40 GLY A 45 1 ? 6 HELX_P HELX_P2 2 ASP A 55 ? ALA A 65 ? ASP A 55 ALA A 65 1 ? 11 HELX_P HELX_P3 3 SER A 66 ? ASP A 71 ? SER A 66 ASP A 71 5 ? 6 HELX_P HELX_P4 4 SER A 100 ? LEU A 102 ? SER A 100 LEU A 102 5 ? 3 HELX_P HELX_P5 5 GLY A 116 ? LEU A 120 ? GLY A 116 LEU A 120 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 3 SG ? ? ? 1_555 A CYS 26 SG ? ? A CYS 3 A CYS 26 1_555 ? ? ? ? ? ? ? 2.031 ? metalc1 metalc ? ? C RTB . RU ? ? ? 1_555 A HIS 83 NE2 ? ? A RTB 903 A HIS 83 1_555 ? ? ? ? ? ? ? 2.024 ? metalc2 metalc ? ? B CU . CU ? ? ? 1_555 A HIS 117 ND1 ? ? A CU 901 A HIS 117 1_555 ? ? ? ? ? ? ? 2.080 ? metalc3 metalc ? ? B CU . CU ? ? ? 1_555 A HIS 46 ND1 ? ? A CU 901 A HIS 46 1_555 ? ? ? ? ? ? ? 2.023 ? metalc4 metalc ? ? B CU . CU ? ? ? 1_555 A CYS 112 SG ? ? A CU 901 A CYS 112 1_555 ? ? ? ? ? ? ? 2.205 ? metalc5 metalc ? ? B CU . CU ? ? ? 1_555 A MET 121 SD ? ? A CU 901 A MET 121 1_555 ? ? ? ? ? ? ? 3.317 ? metalc6 metalc ? ? B CU . CU ? ? ? 1_555 A GLY 45 O ? ? A CU 901 A GLY 45 1_555 ? ? ? ? ? ? ? 2.597 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER A 4 ? GLN A 8 ? SER A 4 GLN A 8 A 2 GLN A 28 ? SER A 34 ? GLN A 28 SER A 34 A 3 LYS A 92 ? ASP A 98 ? LYS A 92 ASP A 98 B 1 ALA A 19 ? ASP A 23 ? ALA A 19 ASP A 23 B 2 LYS A 122 ? LYS A 128 ? LYS A 122 LYS A 128 B 3 TYR A 108 ? PHE A 111 ? TYR A 108 PHE A 111 B 4 VAL A 49 ? THR A 52 ? VAL A 49 THR A 52 B 5 ALA A 82 ? HIS A 83 ? ALA A 82 HIS A 83 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 5 ? N VAL A 5 O ASN A 32 ? O ASN A 32 A 2 3 N LEU A 33 ? N LEU A 33 O ASP A 93 ? O ASP A 93 B 1 2 N VAL A 22 ? N VAL A 22 O THR A 126 ? O THR A 126 B 2 3 O GLY A 123 ? O GLY A 123 N PHE A 110 ? N PHE A 110 B 3 4 O MET A 109 ? O MET A 109 N SER A 51 ? N SER A 51 B 4 5 N LEU A 50 ? N LEU A 50 O ALA A 82 ? O ALA A 82 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE CU A 901' AC2 Software ? ? ? ? 9 'BINDING SITE FOR RESIDUE RTB A 903' AC3 Software ? ? ? ? 11 'BINDING SITE FOR RESIDUE IME A 902' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 GLY A 45 ? GLY A 45 . ? 1_555 ? 2 AC1 5 HIS A 46 ? HIS A 46 . ? 1_555 ? 3 AC1 5 CYS A 112 ? CYS A 112 . ? 1_555 ? 4 AC1 5 HIS A 117 ? HIS A 117 . ? 1_555 ? 5 AC1 5 MET A 121 ? MET A 121 . ? 1_555 ? 6 AC2 9 HIS A 35 ? HIS A 35 . ? 8_555 ? 7 AC2 9 GLY A 37 ? GLY A 37 . ? 8_555 ? 8 AC2 9 ASN A 38 ? ASN A 38 . ? 8_555 ? 9 AC2 9 LYS A 74 ? LYS A 74 . ? 1_555 ? 10 AC2 9 ASP A 76 ? ASP A 76 . ? 1_555 ? 11 AC2 9 ASP A 77 ? ASP A 77 . ? 1_555 ? 12 AC2 9 VAL A 80 ? VAL A 80 . ? 1_555 ? 13 AC2 9 HIS A 83 ? HIS A 83 . ? 1_555 ? 14 AC2 9 GLY A 90 ? GLY A 90 . ? 8_555 ? 15 AC3 11 LYS A 24 ? LYS A 24 . ? 1_555 ? 16 AC3 11 LYS A 24 ? LYS A 24 . ? 3_655 ? 17 AC3 11 CYS A 26 ? CYS A 26 . ? 1_555 ? 18 AC3 11 LYS A 27 ? LYS A 27 . ? 1_555 ? 19 AC3 11 ASP A 98 ? ASP A 98 . ? 1_555 ? 20 AC3 11 VAL A 99 ? VAL A 99 . ? 1_555 ? 21 AC3 11 VAL A 99 ? VAL A 99 . ? 3_655 ? 22 AC3 11 SER A 100 ? SER A 100 . ? 1_555 ? 23 AC3 11 SER A 100 ? SER A 100 . ? 3_655 ? 24 AC3 11 LEU A 102 ? LEU A 102 . ? 3_655 ? 25 AC3 11 LEU A 102 ? LEU A 102 . ? 1_555 ? # _database_PDB_matrix.entry_id 1JZF _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1JZF _atom_sites.fract_transf_matrix[1][1] 0.018948 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016276 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013166 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CU N O RU S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 1 ALA ALA A . n A 1 2 GLU 2 2 2 GLU GLN A . n A 1 3 CYS 3 3 3 CYS CYS A . n A 1 4 SER 4 4 4 SER SER A . n A 1 5 VAL 5 5 5 VAL VAL A . n A 1 6 ASP 6 6 6 ASP ASP A . n A 1 7 ILE 7 7 7 ILE ILE A . n A 1 8 GLN 8 8 8 GLN GLN A . n A 1 9 GLY 9 9 9 GLY GLY A . n A 1 10 ASN 10 10 10 ASN ASN A . n A 1 11 ASP 11 11 11 ASP ASP A . n A 1 12 GLN 12 12 12 GLN GLN A . n A 1 13 MET 13 13 13 MET MET A . n A 1 14 GLN 14 14 14 GLN GLN A . n A 1 15 PHE 15 15 15 PHE PHE A . n A 1 16 ASN 16 16 16 ASN ASN A . n A 1 17 THR 17 17 17 THR THR A . n A 1 18 ASN 18 18 18 ASN ASN A . n A 1 19 ALA 19 19 19 ALA ALA A . n A 1 20 ILE 20 20 20 ILE ILE A . n A 1 21 THR 21 21 21 THR THR A . n A 1 22 VAL 22 22 22 VAL VAL A . n A 1 23 ASP 23 23 23 ASP ASP A . n A 1 24 LYS 24 24 24 LYS LYS A . n A 1 25 SER 25 25 25 SER SER A . n A 1 26 CYS 26 26 26 CYS CYS A . n A 1 27 LYS 27 27 27 LYS LYS A . n A 1 28 GLN 28 28 28 GLN GLN A . n A 1 29 PHE 29 29 29 PHE PHE A . n A 1 30 THR 30 30 30 THR THR A . n A 1 31 VAL 31 31 31 VAL VAL A . n A 1 32 ASN 32 32 32 ASN ASN A . n A 1 33 LEU 33 33 33 LEU LEU A . n A 1 34 SER 34 34 34 SER SER A . n A 1 35 HIS 35 35 35 HIS HIS A . n A 1 36 PRO 36 36 36 PRO PRO A . n A 1 37 GLY 37 37 37 GLY GLY A . n A 1 38 ASN 38 38 38 ASN ASN A . n A 1 39 LEU 39 39 39 LEU LEU A . n A 1 40 PRO 40 40 40 PRO PRO A . n A 1 41 LYS 41 41 41 LYS LYS A . n A 1 42 ASN 42 42 42 ASN ASN A . n A 1 43 VAL 43 43 43 VAL VAL A . n A 1 44 MET 44 44 44 MET MET A . n A 1 45 GLY 45 45 45 GLY GLY A . n A 1 46 HIS 46 46 46 HIS HIS A . n A 1 47 ASN 47 47 47 ASN ASN A . n A 1 48 TRP 48 48 48 TRP TRP A . n A 1 49 VAL 49 49 49 VAL VAL A . n A 1 50 LEU 50 50 50 LEU LEU A . n A 1 51 SER 51 51 51 SER SER A . n A 1 52 THR 52 52 52 THR THR A . n A 1 53 ALA 53 53 53 ALA ALA A . n A 1 54 ALA 54 54 54 ALA ALA A . n A 1 55 ASP 55 55 55 ASP ASP A . n A 1 56 MET 56 56 56 MET MET A . n A 1 57 GLN 57 57 57 GLN GLN A . n A 1 58 GLY 58 58 58 GLY GLY A . n A 1 59 VAL 59 59 59 VAL VAL A . n A 1 60 VAL 60 60 60 VAL VAL A . n A 1 61 THR 61 61 61 THR THR A . n A 1 62 ASP 62 62 62 ASP ASP A . n A 1 63 GLY 63 63 63 GLY GLY A . n A 1 64 MET 64 64 64 MET MET A . n A 1 65 ALA 65 65 65 ALA ALA A . n A 1 66 SER 66 66 66 SER SER A . n A 1 67 GLY 67 67 67 GLY GLY A . n A 1 68 LEU 68 68 68 LEU LEU A . n A 1 69 ASP 69 69 69 ASP ASP A . n A 1 70 LYS 70 70 70 LYS LYS A . n A 1 71 ASP 71 71 71 ASP ASP A . n A 1 72 TYR 72 72 72 TYR TYR A . n A 1 73 LEU 73 73 73 LEU LEU A . n A 1 74 LYS 74 74 74 LYS LYS A . n A 1 75 PRO 75 75 75 PRO PRO A . n A 1 76 ASP 76 76 76 ASP ASP A . n A 1 77 ASP 77 77 77 ASP ASP A . n A 1 78 SER 78 78 78 SER SER A . n A 1 79 ARG 79 79 79 ARG ARG A . n A 1 80 VAL 80 80 80 VAL VAL A . n A 1 81 ILE 81 81 81 ILE ILE A . n A 1 82 ALA 82 82 82 ALA ALA A . n A 1 83 HIS 83 83 83 HIS HIS A . n A 1 84 THR 84 84 84 THR THR A . n A 1 85 LYS 85 85 85 LYS LYS A . n A 1 86 LEU 86 86 86 LEU LEU A . n A 1 87 ILE 87 87 87 ILE ILE A . n A 1 88 GLY 88 88 88 GLY GLY A . n A 1 89 SER 89 89 89 SER SER A . n A 1 90 GLY 90 90 90 GLY GLY A . n A 1 91 GLU 91 91 91 GLU GLU A . n A 1 92 LYS 92 92 92 LYS LYS A . n A 1 93 ASP 93 93 93 ASP ASP A . n A 1 94 SER 94 94 94 SER SER A . n A 1 95 VAL 95 95 95 VAL VAL A . n A 1 96 THR 96 96 96 THR THR A . n A 1 97 PHE 97 97 97 PHE PHE A . n A 1 98 ASP 98 98 98 ASP ASP A . n A 1 99 VAL 99 99 99 VAL VAL A . n A 1 100 SER 100 100 100 SER SER A . n A 1 101 LYS 101 101 101 LYS LYS A . n A 1 102 LEU 102 102 102 LEU LEU A . n A 1 103 LYS 103 103 103 LYS LYS A . n A 1 104 GLU 104 104 104 GLU GLU A . n A 1 105 GLY 105 105 105 GLY GLY A . n A 1 106 GLU 106 106 106 GLU GLU A . n A 1 107 GLN 107 107 107 GLN GLN A . n A 1 108 TYR 108 108 108 TYR TYR A . n A 1 109 MET 109 109 109 MET MET A . n A 1 110 PHE 110 110 110 PHE PHE A . n A 1 111 PHE 111 111 111 PHE PHE A . n A 1 112 CYS 112 112 112 CYS CYS A . n A 1 113 THR 113 113 113 THR THR A . n A 1 114 PHE 114 114 114 PHE PHE A . n A 1 115 PRO 115 115 115 PRO PRO A . n A 1 116 GLY 116 116 116 GLY GLY A . n A 1 117 HIS 117 117 117 HIS HIS A . n A 1 118 SER 118 118 118 SER SER A . n A 1 119 ALA 119 119 119 ALA ALA A . n A 1 120 LEU 120 120 120 LEU LEU A . n A 1 121 MET 121 121 121 MET MET A . n A 1 122 LYS 122 122 122 LYS LYS A . n A 1 123 GLY 123 123 123 GLY GLY A . n A 1 124 THR 124 124 124 THR THR A . n A 1 125 LEU 125 125 125 LEU LEU A . n A 1 126 THR 126 126 126 THR THR A . n A 1 127 LEU 127 127 127 LEU LEU A . n A 1 128 LYS 128 128 128 LYS LYS A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A IME 902 ? D IME . 2 1 A IME 902 ? D IME . 3 1 A HOH 1058 ? E HOH . 4 1 A HOH 1108 ? E HOH . 5 1 A HOH 1111 ? E HOH . 6 1 A HOH 1118 ? E HOH . 7 1 A HOH 1174 ? E HOH . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 83 ? A HIS 83 ? 1_555 RU ? C RTB . ? A RTB 903 ? 1_555 N2 ? C RTB . ? A RTB 903 ? 1_555 173.2 ? 2 NE2 ? A HIS 83 ? A HIS 83 ? 1_555 RU ? C RTB . ? A RTB 903 ? 1_555 N3 ? C RTB . ? A RTB 903 ? 1_555 89.7 ? 3 N2 ? C RTB . ? A RTB 903 ? 1_555 RU ? C RTB . ? A RTB 903 ? 1_555 N3 ? C RTB . ? A RTB 903 ? 1_555 94.5 ? 4 NE2 ? A HIS 83 ? A HIS 83 ? 1_555 RU ? C RTB . ? A RTB 903 ? 1_555 N4 ? C RTB . ? A RTB 903 ? 1_555 92.9 ? 5 N2 ? C RTB . ? A RTB 903 ? 1_555 RU ? C RTB . ? A RTB 903 ? 1_555 N4 ? C RTB . ? A RTB 903 ? 1_555 82.9 ? 6 N3 ? C RTB . ? A RTB 903 ? 1_555 RU ? C RTB . ? A RTB 903 ? 1_555 N4 ? C RTB . ? A RTB 903 ? 1_555 177.1 ? 7 NE2 ? A HIS 83 ? A HIS 83 ? 1_555 RU ? C RTB . ? A RTB 903 ? 1_555 N5 ? C RTB . ? A RTB 903 ? 1_555 88.4 ? 8 N2 ? C RTB . ? A RTB 903 ? 1_555 RU ? C RTB . ? A RTB 903 ? 1_555 N5 ? C RTB . ? A RTB 903 ? 1_555 87.0 ? 9 N3 ? C RTB . ? A RTB 903 ? 1_555 RU ? C RTB . ? A RTB 903 ? 1_555 N5 ? C RTB . ? A RTB 903 ? 1_555 80.0 ? 10 N4 ? C RTB . ? A RTB 903 ? 1_555 RU ? C RTB . ? A RTB 903 ? 1_555 N5 ? C RTB . ? A RTB 903 ? 1_555 98.7 ? 11 NE2 ? A HIS 83 ? A HIS 83 ? 1_555 RU ? C RTB . ? A RTB 903 ? 1_555 N6 ? C RTB . ? A RTB 903 ? 1_555 91.7 ? 12 N2 ? C RTB . ? A RTB 903 ? 1_555 RU ? C RTB . ? A RTB 903 ? 1_555 N6 ? C RTB . ? A RTB 903 ? 1_555 94.4 ? 13 N3 ? C RTB . ? A RTB 903 ? 1_555 RU ? C RTB . ? A RTB 903 ? 1_555 N6 ? C RTB . ? A RTB 903 ? 1_555 80.7 ? 14 N4 ? C RTB . ? A RTB 903 ? 1_555 RU ? C RTB . ? A RTB 903 ? 1_555 N6 ? C RTB . ? A RTB 903 ? 1_555 100.6 ? 15 N5 ? C RTB . ? A RTB 903 ? 1_555 RU ? C RTB . ? A RTB 903 ? 1_555 N6 ? C RTB . ? A RTB 903 ? 1_555 160.7 ? 16 ND1 ? A HIS 117 ? A HIS 117 ? 1_555 CU ? B CU . ? A CU 901 ? 1_555 ND1 ? A HIS 46 ? A HIS 46 ? 1_555 104.7 ? 17 ND1 ? A HIS 117 ? A HIS 117 ? 1_555 CU ? B CU . ? A CU 901 ? 1_555 SG ? A CYS 112 ? A CYS 112 ? 1_555 123.0 ? 18 ND1 ? A HIS 46 ? A HIS 46 ? 1_555 CU ? B CU . ? A CU 901 ? 1_555 SG ? A CYS 112 ? A CYS 112 ? 1_555 132.3 ? 19 ND1 ? A HIS 117 ? A HIS 117 ? 1_555 CU ? B CU . ? A CU 901 ? 1_555 SD ? A MET 121 ? A MET 121 ? 1_555 85.4 ? 20 ND1 ? A HIS 46 ? A HIS 46 ? 1_555 CU ? B CU . ? A CU 901 ? 1_555 SD ? A MET 121 ? A MET 121 ? 1_555 72.0 ? 21 SG ? A CYS 112 ? A CYS 112 ? 1_555 CU ? B CU . ? A CU 901 ? 1_555 SD ? A MET 121 ? A MET 121 ? 1_555 109.6 ? 22 ND1 ? A HIS 117 ? A HIS 117 ? 1_555 CU ? B CU . ? A CU 901 ? 1_555 O ? A GLY 45 ? A GLY 45 ? 1_555 91.9 ? 23 ND1 ? A HIS 46 ? A HIS 46 ? 1_555 CU ? B CU . ? A CU 901 ? 1_555 O ? A GLY 45 ? A GLY 45 ? 1_555 80.3 ? 24 SG ? A CYS 112 ? A CYS 112 ? 1_555 CU ? B CU . ? A CU 901 ? 1_555 O ? A GLY 45 ? A GLY 45 ? 1_555 96.5 ? 25 SD ? A MET 121 ? A MET 121 ? 1_555 CU ? B CU . ? A CU 901 ? 1_555 O ? A GLY 45 ? A GLY 45 ? 1_555 150.4 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2001-10-17 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 X-PLOR 'model building' . ? 3 CNS refinement 1.0 ? 4 X-PLOR phasing . ? 5 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CD _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 GLU _pdbx_validate_rmsd_bond.auth_seq_id_1 2 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 OE2 _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 GLU _pdbx_validate_rmsd_bond.auth_seq_id_2 2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.328 _pdbx_validate_rmsd_bond.bond_target_value 1.252 _pdbx_validate_rmsd_bond.bond_deviation 0.076 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.011 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 CYS A 3 ? ? -99.13 30.90 2 1 ASN A 10 ? ? -113.13 -169.94 3 1 MET A 44 ? ? -140.91 43.25 4 1 MET A 44 ? ? -140.81 43.25 5 1 PRO A 115 ? ? -39.24 117.36 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 N 1 A IME 902 ? O2 ? D IME 1 O2 2 1 N 1 A IME 902 ? CG3 ? D IME 1 CG3 3 1 N 1 A IME 902 ? CDW ? D IME 1 CDW 4 1 N 1 A IME 902 ? NDV ? D IME 1 NDV 5 1 N 1 A IME 902 ? CEV ? D IME 1 CEV 6 1 N 1 A IME 902 ? NEW ? D IME 1 NEW 7 1 N 1 A IME 902 ? CG4 ? D IME 1 CG4 8 1 N 1 A IME 902 ? CD6 ? D IME 1 CD6 9 1 N 1 A IME 902 ? ND5 ? D IME 1 ND5 10 1 N 1 A IME 902 ? CE5 ? D IME 1 CE5 11 1 N 1 A IME 902 ? NE6 ? D IME 1 NE6 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'COPPER (II) ION' CU 3 ;(2,2':6',2'-TERPYRIDINE)-(1,10-PHENANTHROLINE) RUTHENIUM (II) ; RTB 4 'TETRA(IMIDAZOLE)DIAQUACOPPER (II)' IME 5 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CU 1 901 901 CU CU A . C 3 RTB 1 903 903 RTB RTB A . D 4 IME 1 902 902 IME CU A . E 5 HOH 1 1000 1000 HOH WAT A . E 5 HOH 2 1001 1001 HOH WAT A . E 5 HOH 3 1002 1002 HOH WAT A . E 5 HOH 4 1003 1003 HOH WAT A . E 5 HOH 5 1004 1004 HOH WAT A . E 5 HOH 6 1005 1005 HOH WAT A . E 5 HOH 7 1006 1006 HOH WAT A . E 5 HOH 8 1007 1007 HOH WAT A . E 5 HOH 9 1008 1008 HOH WAT A . E 5 HOH 10 1009 1009 HOH WAT A . E 5 HOH 11 1010 1010 HOH WAT A . E 5 HOH 12 1011 1011 HOH WAT A . E 5 HOH 13 1012 1012 HOH WAT A . E 5 HOH 14 1013 1013 HOH WAT A . E 5 HOH 15 1014 1014 HOH WAT A . E 5 HOH 16 1015 1015 HOH WAT A . E 5 HOH 17 1016 1016 HOH WAT A . E 5 HOH 18 1017 1017 HOH WAT A . E 5 HOH 19 1018 1018 HOH WAT A . E 5 HOH 20 1019 1019 HOH WAT A . E 5 HOH 21 1020 1020 HOH WAT A . E 5 HOH 22 1021 1021 HOH WAT A . E 5 HOH 23 1022 1022 HOH WAT A . E 5 HOH 24 1023 1023 HOH WAT A . E 5 HOH 25 1024 1024 HOH WAT A . E 5 HOH 26 1025 1025 HOH WAT A . E 5 HOH 27 1026 1026 HOH WAT A . E 5 HOH 28 1027 1027 HOH WAT A . E 5 HOH 29 1028 1028 HOH WAT A . E 5 HOH 30 1029 1029 HOH WAT A . E 5 HOH 31 1030 1030 HOH WAT A . E 5 HOH 32 1031 1031 HOH WAT A . E 5 HOH 33 1032 1032 HOH WAT A . E 5 HOH 34 1033 1033 HOH WAT A . E 5 HOH 35 1034 1034 HOH WAT A . E 5 HOH 36 1035 1035 HOH WAT A . E 5 HOH 37 1036 1036 HOH WAT A . E 5 HOH 38 1037 1037 HOH WAT A . E 5 HOH 39 1038 1038 HOH WAT A . E 5 HOH 40 1039 1039 HOH WAT A . E 5 HOH 41 1040 1040 HOH WAT A . E 5 HOH 42 1041 1041 HOH WAT A . E 5 HOH 43 1042 1042 HOH WAT A . E 5 HOH 44 1043 1043 HOH WAT A . E 5 HOH 45 1044 1044 HOH WAT A . E 5 HOH 46 1045 1045 HOH WAT A . E 5 HOH 47 1046 1046 HOH WAT A . E 5 HOH 48 1047 1047 HOH WAT A . E 5 HOH 49 1048 1048 HOH WAT A . E 5 HOH 50 1049 1049 HOH WAT A . E 5 HOH 51 1050 1050 HOH WAT A . E 5 HOH 52 1051 1051 HOH WAT A . E 5 HOH 53 1052 1052 HOH WAT A . E 5 HOH 54 1053 1053 HOH WAT A . E 5 HOH 55 1054 1054 HOH WAT A . E 5 HOH 56 1055 1055 HOH WAT A . E 5 HOH 57 1056 1056 HOH WAT A . E 5 HOH 58 1057 1057 HOH WAT A . E 5 HOH 59 1058 1058 HOH WAT A . E 5 HOH 60 1059 1059 HOH WAT A . E 5 HOH 61 1060 1060 HOH WAT A . E 5 HOH 62 1061 1061 HOH WAT A . E 5 HOH 63 1062 1062 HOH WAT A . E 5 HOH 64 1063 1063 HOH WAT A . E 5 HOH 65 1064 1064 HOH WAT A . E 5 HOH 66 1065 1065 HOH WAT A . E 5 HOH 67 1066 1066 HOH WAT A . E 5 HOH 68 1067 1067 HOH WAT A . E 5 HOH 69 1068 1068 HOH WAT A . E 5 HOH 70 1069 1069 HOH WAT A . E 5 HOH 71 1070 1070 HOH WAT A . E 5 HOH 72 1071 1071 HOH WAT A . E 5 HOH 73 1072 1072 HOH WAT A . E 5 HOH 74 1073 1073 HOH WAT A . E 5 HOH 75 1074 1074 HOH WAT A . E 5 HOH 76 1075 1075 HOH WAT A . E 5 HOH 77 1076 1076 HOH WAT A . E 5 HOH 78 1077 1077 HOH WAT A . E 5 HOH 79 1078 1078 HOH WAT A . E 5 HOH 80 1079 1079 HOH WAT A . E 5 HOH 81 1080 1080 HOH WAT A . E 5 HOH 82 1081 1081 HOH WAT A . E 5 HOH 83 1082 1082 HOH WAT A . E 5 HOH 84 1083 1083 HOH WAT A . E 5 HOH 85 1084 1084 HOH WAT A . E 5 HOH 86 1085 1085 HOH WAT A . E 5 HOH 87 1086 1086 HOH WAT A . E 5 HOH 88 1087 1087 HOH WAT A . E 5 HOH 89 1088 1088 HOH WAT A . E 5 HOH 90 1089 1089 HOH WAT A . E 5 HOH 91 1090 1090 HOH WAT A . E 5 HOH 92 1091 1091 HOH WAT A . E 5 HOH 93 1092 1092 HOH WAT A . E 5 HOH 94 1093 1093 HOH WAT A . E 5 HOH 95 1094 1094 HOH WAT A . E 5 HOH 96 1095 1095 HOH WAT A . E 5 HOH 97 1096 1096 HOH WAT A . E 5 HOH 98 1097 1097 HOH WAT A . E 5 HOH 99 1098 1098 HOH WAT A . E 5 HOH 100 1099 1099 HOH WAT A . E 5 HOH 101 1100 1100 HOH WAT A . E 5 HOH 102 1101 1101 HOH WAT A . E 5 HOH 103 1102 1102 HOH WAT A . E 5 HOH 104 1103 1103 HOH WAT A . E 5 HOH 105 1104 1104 HOH WAT A . E 5 HOH 106 1105 1105 HOH WAT A . E 5 HOH 107 1106 1106 HOH WAT A . E 5 HOH 108 1107 1107 HOH WAT A . E 5 HOH 109 1108 1108 HOH WAT A . E 5 HOH 110 1109 1109 HOH WAT A . E 5 HOH 111 1111 1111 HOH WAT A . E 5 HOH 112 1112 1112 HOH WAT A . E 5 HOH 113 1113 1113 HOH WAT A . E 5 HOH 114 1114 1114 HOH WAT A . E 5 HOH 115 1115 1115 HOH WAT A . E 5 HOH 116 1116 1116 HOH WAT A . E 5 HOH 117 1117 1117 HOH WAT A . E 5 HOH 118 1118 1118 HOH WAT A . E 5 HOH 119 1119 1119 HOH WAT A . E 5 HOH 120 1120 1120 HOH WAT A . E 5 HOH 121 1121 1121 HOH WAT A . E 5 HOH 122 1122 1122 HOH WAT A . E 5 HOH 123 1123 1123 HOH WAT A . E 5 HOH 124 1124 1124 HOH WAT A . E 5 HOH 125 1125 1125 HOH WAT A . E 5 HOH 126 1126 1126 HOH WAT A . E 5 HOH 127 1127 1127 HOH WAT A . E 5 HOH 128 1128 1128 HOH WAT A . E 5 HOH 129 1129 1129 HOH WAT A . E 5 HOH 130 1130 1130 HOH WAT A . E 5 HOH 131 1131 1131 HOH WAT A . E 5 HOH 132 1132 1132 HOH WAT A . E 5 HOH 133 1133 1133 HOH WAT A . E 5 HOH 134 1134 1134 HOH WAT A . E 5 HOH 135 1135 1135 HOH WAT A . E 5 HOH 136 1136 1136 HOH WAT A . E 5 HOH 137 1137 1137 HOH WAT A . E 5 HOH 138 1138 1138 HOH WAT A . E 5 HOH 139 1139 1139 HOH WAT A . E 5 HOH 140 1140 1140 HOH WAT A . E 5 HOH 141 1141 1141 HOH WAT A . E 5 HOH 142 1142 1142 HOH WAT A . E 5 HOH 143 1143 1143 HOH WAT A . E 5 HOH 144 1144 1144 HOH WAT A . E 5 HOH 145 1145 1145 HOH WAT A . E 5 HOH 146 1146 1146 HOH WAT A . E 5 HOH 147 1147 1147 HOH WAT A . E 5 HOH 148 1148 1148 HOH WAT A . E 5 HOH 149 1149 1149 HOH WAT A . E 5 HOH 150 1150 1150 HOH WAT A . E 5 HOH 151 1151 1151 HOH WAT A . E 5 HOH 152 1152 1152 HOH WAT A . E 5 HOH 153 1153 1153 HOH WAT A . E 5 HOH 154 1154 1154 HOH WAT A . E 5 HOH 155 1155 1155 HOH WAT A . E 5 HOH 156 1156 1156 HOH WAT A . E 5 HOH 157 1157 1157 HOH WAT A . E 5 HOH 158 1158 1158 HOH WAT A . E 5 HOH 159 1159 1159 HOH WAT A . E 5 HOH 160 1160 1160 HOH WAT A . E 5 HOH 161 1161 1161 HOH WAT A . E 5 HOH 162 1162 1162 HOH WAT A . E 5 HOH 163 1163 1163 HOH WAT A . E 5 HOH 164 1164 1164 HOH WAT A . E 5 HOH 165 1165 1165 HOH WAT A . E 5 HOH 166 1166 1166 HOH WAT A . E 5 HOH 167 1167 1167 HOH WAT A . E 5 HOH 168 1168 1168 HOH WAT A . E 5 HOH 169 1169 1169 HOH WAT A . E 5 HOH 170 1170 1170 HOH WAT A . E 5 HOH 171 1171 1171 HOH WAT A . E 5 HOH 172 1172 1172 HOH WAT A . E 5 HOH 173 1173 1173 HOH WAT A . E 5 HOH 174 1174 1174 HOH WAT A . #