data_1K12 # _entry.id 1K12 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.329 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1K12 RCSB RCSB014426 WWPDB D_1000014426 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1K12 _pdbx_database_status.recvd_initial_deposition_date 2001-09-23 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bianchet, M.A.' 1 'Odom, E.W.' 2 'Vasta, G.R.' 3 'Amzel, L.M.' 4 # _citation.id primary _citation.title 'A novel fucose recognition fold involved in innate immunity.' _citation.journal_abbrev Nat.Struct.Biol. _citation.journal_volume 9 _citation.page_first 628 _citation.page_last 634 _citation.year 2002 _citation.journal_id_ASTM NSBIEW _citation.country US _citation.journal_id_ISSN 1072-8368 _citation.journal_id_CSD 2024 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12091873 _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bianchet, M.A.' 1 ? primary 'Odom, E.W.' 2 ? primary 'Vasta, G.R.' 3 ? primary 'Amzel, L.M.' 4 ? # _cell.entry_id 1K12 _cell.length_a 65.540 _cell.length_b 65.540 _cell.length_c 245.136 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1K12 _symmetry.space_group_name_H-M 'H 3 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat LECTIN 16908.643 1 ? ? ? ? 2 non-polymer man alpha-L-fucopyranose 164.156 1 ? ? ? ? 3 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? 4 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 5 water nat water 18.015 130 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;VIPEGYTQENVAVRGKATQSAQLRGEHAANSEASNAIDGNRDSNFYHGSCTHSSGQANPWWRVDLLQVYTITSVTITNRG DCCGERISGAEINIGQHLASNGVNNPECSVIGSMATGETKTFHCPAPMIGRYVVTYLPTSESLHLCEVEVNVDKPAAA ; _entity_poly.pdbx_seq_one_letter_code_can ;VIPEGYTQENVAVRGKATQSAQLRGEHAANSEASNAIDGNRDSNFYHGSCTHSSGQANPWWRVDLLQVYTITSVTITNRG DCCGERISGAEINIGQHLASNGVNNPECSVIGSMATGETKTFHCPAPMIGRYVVTYLPTSESLHLCEVEVNVDKPAAA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 VAL n 1 2 ILE n 1 3 PRO n 1 4 GLU n 1 5 GLY n 1 6 TYR n 1 7 THR n 1 8 GLN n 1 9 GLU n 1 10 ASN n 1 11 VAL n 1 12 ALA n 1 13 VAL n 1 14 ARG n 1 15 GLY n 1 16 LYS n 1 17 ALA n 1 18 THR n 1 19 GLN n 1 20 SER n 1 21 ALA n 1 22 GLN n 1 23 LEU n 1 24 ARG n 1 25 GLY n 1 26 GLU n 1 27 HIS n 1 28 ALA n 1 29 ALA n 1 30 ASN n 1 31 SER n 1 32 GLU n 1 33 ALA n 1 34 SER n 1 35 ASN n 1 36 ALA n 1 37 ILE n 1 38 ASP n 1 39 GLY n 1 40 ASN n 1 41 ARG n 1 42 ASP n 1 43 SER n 1 44 ASN n 1 45 PHE n 1 46 TYR n 1 47 HIS n 1 48 GLY n 1 49 SER n 1 50 CYS n 1 51 THR n 1 52 HIS n 1 53 SER n 1 54 SER n 1 55 GLY n 1 56 GLN n 1 57 ALA n 1 58 ASN n 1 59 PRO n 1 60 TRP n 1 61 TRP n 1 62 ARG n 1 63 VAL n 1 64 ASP n 1 65 LEU n 1 66 LEU n 1 67 GLN n 1 68 VAL n 1 69 TYR n 1 70 THR n 1 71 ILE n 1 72 THR n 1 73 SER n 1 74 VAL n 1 75 THR n 1 76 ILE n 1 77 THR n 1 78 ASN n 1 79 ARG n 1 80 GLY n 1 81 ASP n 1 82 CYS n 1 83 CYS n 1 84 GLY n 1 85 GLU n 1 86 ARG n 1 87 ILE n 1 88 SER n 1 89 GLY n 1 90 ALA n 1 91 GLU n 1 92 ILE n 1 93 ASN n 1 94 ILE n 1 95 GLY n 1 96 GLN n 1 97 HIS n 1 98 LEU n 1 99 ALA n 1 100 SER n 1 101 ASN n 1 102 GLY n 1 103 VAL n 1 104 ASN n 1 105 ASN n 1 106 PRO n 1 107 GLU n 1 108 CYS n 1 109 SER n 1 110 VAL n 1 111 ILE n 1 112 GLY n 1 113 SER n 1 114 MET n 1 115 ALA n 1 116 THR n 1 117 GLY n 1 118 GLU n 1 119 THR n 1 120 LYS n 1 121 THR n 1 122 PHE n 1 123 HIS n 1 124 CYS n 1 125 PRO n 1 126 ALA n 1 127 PRO n 1 128 MET n 1 129 ILE n 1 130 GLY n 1 131 ARG n 1 132 TYR n 1 133 VAL n 1 134 VAL n 1 135 THR n 1 136 TYR n 1 137 LEU n 1 138 PRO n 1 139 THR n 1 140 SER n 1 141 GLU n 1 142 SER n 1 143 LEU n 1 144 HIS n 1 145 LEU n 1 146 CYS n 1 147 GLU n 1 148 VAL n 1 149 GLU n 1 150 VAL n 1 151 ASN n 1 152 VAL n 1 153 ASP n 1 154 LYS n 1 155 PRO n 1 156 ALA n 1 157 ALA n 1 158 ALA n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name 'European eel' _entity_src_nat.pdbx_organism_scientific 'Anguilla anguilla' _entity_src_nat.pdbx_ncbi_taxonomy_id 7936 _entity_src_nat.genus Anguilla _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q7SIC1_ANGAN _struct_ref.pdbx_db_accession Q7SIC1 _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1K12 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 158 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q7SIC1 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 158 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 158 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FUC 'L-saccharide, alpha linking' . alpha-L-fucopyranose ? 'C6 H12 O5' 164.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1K12 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.99 _exptl_crystal.density_percent_sol 58.93 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293.15 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details 'MPD 40-50%, 5mM Fucose 19 mM Na Cl and 10 mM Tris HCl pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293.15K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date 2001-06-01 _diffrn_detector.details 'Osmic mirrors' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator mirrors _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU300' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 1K12 _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 30.41 _reflns.d_resolution_high 1.9 _reflns.number_obs 16454 _reflns.number_all 16454 _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs 0.056 _reflns.pdbx_Rsym_value 0.056 _reflns.pdbx_netI_over_sigmaI 8.4 _reflns.B_iso_Wilson_estimate 23.5 _reflns.pdbx_redundancy 9.71 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.9 _reflns_shell.d_res_low 1.97 _reflns_shell.percent_possible_all 99.8 _reflns_shell.Rmerge_I_obs 0.237 _reflns_shell.pdbx_Rsym_value 0.237 _reflns_shell.meanI_over_sigI_obs 2.4 _reflns_shell.pdbx_redundancy 5.73 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 16493 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1K12 _refine.ls_number_reflns_obs 16454 _refine.ls_number_reflns_all 16454 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 2178865.51 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.ls_d_res_low 30.42 _refine.ls_d_res_high 1.90 _refine.ls_percent_reflns_obs 99.6 _refine.ls_R_factor_obs 0.19 _refine.ls_R_factor_all 0.1931 _refine.ls_R_factor_R_work 0.19 _refine.ls_R_factor_R_free 0.239 _refine.ls_R_factor_R_free_error 0.006 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.0 _refine.ls_number_reflns_R_free 1647 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 29.9 _refine.aniso_B[1][1] 5.47 _refine.aniso_B[2][2] 5.47 _refine.aniso_B[3][3] -10.95 _refine.aniso_B[1][2] 3.77 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.329298 _refine.solvent_model_param_bsol 53.34 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SIRAS _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1K12 _refine_analyze.Luzzati_coordinate_error_obs 0.23 _refine_analyze.Luzzati_sigma_a_obs 0.25 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.28 _refine_analyze.Luzzati_sigma_a_free 0.23 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1182 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 13 _refine_hist.number_atoms_solvent 130 _refine_hist.number_atoms_total 1325 _refine_hist.d_res_high 1.90 _refine_hist.d_res_low 30.42 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.009 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.7 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 26.2 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.96 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.16 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 1.97 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 1.90 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 2.85 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 1.90 _refine_ls_shell.d_res_low 2.02 _refine_ls_shell.number_reflns_R_work 2399 _refine_ls_shell.R_factor_R_work 0.319 _refine_ls_shell.percent_reflns_obs 98.5 _refine_ls_shell.R_factor_R_free 0.342 _refine_ls_shell.R_factor_R_free_error 0.021 _refine_ls_shell.percent_reflns_R_free 9.8 _refine_ls_shell.number_reflns_R_free 262 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 CARBOHYDRATE.PARAM CARBOHYDRATE.TOP 'X-RAY DIFFRACTION' 3 WATER_REP.PARAM ION.TOP 'X-RAY DIFFRACTION' 4 ION.PARAM WATER.TOP 'X-RAY DIFFRACTION' # _struct.entry_id 1K12 _struct.title 'Fucose Binding lectin' _struct.pdbx_descriptor LECTIN _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1K12 _struct_keywords.pdbx_keywords 'SUGAR BINDING PROTEIN' _struct_keywords.text 'BETA BARREL, PROTEIN CARBOHYDRATE COMPLEX, SUGAR BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 12 ? GLY A 15 ? ALA A 12 GLY A 15 5 ? 4 HELX_P HELX_P2 2 HIS A 27 ? SER A 31 ? HIS A 27 SER A 31 5 ? 5 HELX_P HELX_P3 3 GLU A 32 ? ASP A 38 ? GLU A 32 ASP A 38 5 ? 7 HELX_P HELX_P4 4 ASN A 44 ? GLY A 48 ? ASN A 44 GLY A 48 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 50 SG ? ? ? 1_555 A CYS 146 SG ? ? A CYS 50 A CYS 146 1_555 ? ? ? ? ? ? ? 2.045 ? ? disulf2 disulf ? ? A CYS 82 SG ? ? ? 1_555 A CYS 83 SG ? ? A CYS 82 A CYS 83 1_555 ? ? ? ? ? ? ? 2.053 ? ? disulf3 disulf ? ? A CYS 108 SG ? ? ? 1_555 A CYS 124 SG ? ? A CYS 108 A CYS 124 1_555 ? ? ? ? ? ? ? 2.055 ? ? metalc1 metalc ? ? A ASN 35 O ? ? ? 1_555 C CA . CA ? ? A ASN 35 A CA 160 1_555 ? ? ? ? ? ? ? 2.418 ? ? metalc2 metalc ? ? A ASP 38 OD1 ? ? ? 1_555 C CA . CA ? ? A ASP 38 A CA 160 1_555 ? ? ? ? ? ? ? 2.559 ? ? metalc3 metalc ? ? A ASN 40 O ? ? ? 1_555 C CA . CA ? ? A ASN 40 A CA 160 1_555 ? ? ? ? ? ? ? 2.383 ? ? metalc4 metalc ? ? A SER 49 OG ? ? ? 1_555 C CA . CA ? ? A SER 49 A CA 160 1_555 ? ? ? ? ? ? ? 2.589 ? ? metalc5 metalc ? ? A SER 49 O ? ? ? 1_555 C CA . CA ? ? A SER 49 A CA 160 1_555 ? ? ? ? ? ? ? 2.485 ? ? metalc6 metalc ? ? A CYS 146 O ? ? ? 1_555 C CA . CA ? ? A CYS 146 A CA 160 1_555 ? ? ? ? ? ? ? 2.370 ? ? metalc7 metalc ? ? A GLU 147 OE1 ? ? ? 1_555 C CA . CA ? ? A GLU 147 A CA 160 1_555 ? ? ? ? ? ? ? 2.445 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 107 ? VAL A 110 ? GLU A 107 VAL A 110 A 2 GLU A 91 ? GLY A 95 ? GLU A 91 GLY A 95 A 3 THR A 119 ? TYR A 136 ? THR A 119 TYR A 136 A 4 TRP A 60 ? ASN A 78 ? TRP A 60 ASN A 78 A 5 LYS A 16 ? GLN A 19 ? LYS A 16 GLN A 19 B 1 GLU A 107 ? VAL A 110 ? GLU A 107 VAL A 110 B 2 GLU A 91 ? GLY A 95 ? GLU A 91 GLY A 95 B 3 THR A 119 ? TYR A 136 ? THR A 119 TYR A 136 B 4 TRP A 60 ? ASN A 78 ? TRP A 60 ASN A 78 B 5 LEU A 145 ? PRO A 155 ? LEU A 145 PRO A 155 B 6 TYR A 6 ? ASN A 10 ? TYR A 6 ASN A 10 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O CYS A 108 ? O CYS A 108 N ILE A 92 ? N ILE A 92 A 2 3 N ASN A 93 ? N ASN A 93 O VAL A 134 ? O VAL A 134 A 3 4 O MET A 128 ? O MET A 128 N ILE A 71 ? N ILE A 71 A 4 5 O ASP A 64 ? O ASP A 64 N LYS A 16 ? N LYS A 16 B 1 2 O CYS A 108 ? O CYS A 108 N ILE A 92 ? N ILE A 92 B 2 3 N ASN A 93 ? N ASN A 93 O VAL A 134 ? O VAL A 134 B 3 4 O MET A 128 ? O MET A 128 N ILE A 71 ? N ILE A 71 B 4 5 N THR A 77 ? N THR A 77 O CYS A 146 ? O CYS A 146 B 5 6 O LYS A 154 ? O LYS A 154 N THR A 7 ? N THR A 7 # _database_PDB_matrix.entry_id 1K12 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1K12 _atom_sites.fract_transf_matrix[1][1] 0.015258 _atom_sites.fract_transf_matrix[1][2] 0.008809 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017618 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004079 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA CL N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 VAL 1 1 1 VAL VAL A . n A 1 2 ILE 2 2 2 ILE ILE A . n A 1 3 PRO 3 3 3 PRO PRO A . n A 1 4 GLU 4 4 4 GLU GLU A . n A 1 5 GLY 5 5 5 GLY GLY A . n A 1 6 TYR 6 6 6 TYR TYR A . n A 1 7 THR 7 7 7 THR THR A . n A 1 8 GLN 8 8 8 GLN GLN A . n A 1 9 GLU 9 9 9 GLU GLU A . n A 1 10 ASN 10 10 10 ASN ASN A . n A 1 11 VAL 11 11 11 VAL VAL A . n A 1 12 ALA 12 12 12 ALA ALA A . n A 1 13 VAL 13 13 13 VAL VAL A . n A 1 14 ARG 14 14 14 ARG ARG A . n A 1 15 GLY 15 15 15 GLY GLY A . n A 1 16 LYS 16 16 16 LYS LYS A . n A 1 17 ALA 17 17 17 ALA ALA A . n A 1 18 THR 18 18 18 THR THR A . n A 1 19 GLN 19 19 19 GLN GLN A . n A 1 20 SER 20 20 20 SER SER A . n A 1 21 ALA 21 21 21 ALA ALA A . n A 1 22 GLN 22 22 22 GLN GLN A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 ARG 24 24 24 ARG ARG A . n A 1 25 GLY 25 25 25 GLY GLY A . n A 1 26 GLU 26 26 26 GLU GLU A . n A 1 27 HIS 27 27 27 HIS HIS A . n A 1 28 ALA 28 28 28 ALA ALA A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 ASN 30 30 30 ASN ASN A . n A 1 31 SER 31 31 31 SER SER A . n A 1 32 GLU 32 32 32 GLU GLU A . n A 1 33 ALA 33 33 33 ALA ALA A . n A 1 34 SER 34 34 34 SER SER A . n A 1 35 ASN 35 35 35 ASN ASN A . n A 1 36 ALA 36 36 36 ALA ALA A . n A 1 37 ILE 37 37 37 ILE ILE A . n A 1 38 ASP 38 38 38 ASP ASP A . n A 1 39 GLY 39 39 39 GLY GLY A . n A 1 40 ASN 40 40 40 ASN ASN A . n A 1 41 ARG 41 41 41 ARG ARG A . n A 1 42 ASP 42 42 42 ASP ASP A . n A 1 43 SER 43 43 43 SER SER A . n A 1 44 ASN 44 44 44 ASN ASN A . n A 1 45 PHE 45 45 45 PHE PHE A . n A 1 46 TYR 46 46 46 TYR TYR A . n A 1 47 HIS 47 47 47 HIS HIS A . n A 1 48 GLY 48 48 48 GLY GLY A . n A 1 49 SER 49 49 49 SER SER A . n A 1 50 CYS 50 50 50 CYS CYS A . n A 1 51 THR 51 51 51 THR THR A . n A 1 52 HIS 52 52 52 HIS HIS A . n A 1 53 SER 53 53 53 SER SER A . n A 1 54 SER 54 54 54 SER SER A . n A 1 55 GLY 55 55 55 GLY GLY A . n A 1 56 GLN 56 56 56 GLN GLN A . n A 1 57 ALA 57 57 57 ALA ALA A . n A 1 58 ASN 58 58 58 ASN ASN A . n A 1 59 PRO 59 59 59 PRO PRO A . n A 1 60 TRP 60 60 60 TRP TRP A . n A 1 61 TRP 61 61 61 TRP TRP A . n A 1 62 ARG 62 62 62 ARG ARG A . n A 1 63 VAL 63 63 63 VAL VAL A . n A 1 64 ASP 64 64 64 ASP ASP A . n A 1 65 LEU 65 65 65 LEU LEU A . n A 1 66 LEU 66 66 66 LEU LEU A . n A 1 67 GLN 67 67 67 GLN GLN A . n A 1 68 VAL 68 68 68 VAL VAL A . n A 1 69 TYR 69 69 69 TYR TYR A . n A 1 70 THR 70 70 70 THR THR A . n A 1 71 ILE 71 71 71 ILE ILE A . n A 1 72 THR 72 72 72 THR THR A . n A 1 73 SER 73 73 73 SER SER A . n A 1 74 VAL 74 74 74 VAL VAL A . n A 1 75 THR 75 75 75 THR THR A . n A 1 76 ILE 76 76 76 ILE ILE A . n A 1 77 THR 77 77 77 THR THR A . n A 1 78 ASN 78 78 78 ASN ASN A . n A 1 79 ARG 79 79 79 ARG ARG A . n A 1 80 GLY 80 80 80 GLY GLY A . n A 1 81 ASP 81 81 81 ASP ASP A . n A 1 82 CYS 82 82 82 CYS CYS A . n A 1 83 CYS 83 83 83 CYS CYS A . n A 1 84 GLY 84 84 84 GLY GLY A . n A 1 85 GLU 85 85 85 GLU GLU A . n A 1 86 ARG 86 86 86 ARG ARG A . n A 1 87 ILE 87 87 87 ILE ILE A . n A 1 88 SER 88 88 88 SER SER A . n A 1 89 GLY 89 89 89 GLY GLY A . n A 1 90 ALA 90 90 90 ALA ALA A . n A 1 91 GLU 91 91 91 GLU GLU A . n A 1 92 ILE 92 92 92 ILE ILE A . n A 1 93 ASN 93 93 93 ASN ASN A . n A 1 94 ILE 94 94 94 ILE ILE A . n A 1 95 GLY 95 95 95 GLY GLY A . n A 1 96 GLN 96 96 96 GLN GLN A . n A 1 97 HIS 97 97 97 HIS HIS A . n A 1 98 LEU 98 98 98 LEU LEU A . n A 1 99 ALA 99 99 99 ALA ALA A . n A 1 100 SER 100 100 100 SER SER A . n A 1 101 ASN 101 101 101 ASN ASN A . n A 1 102 GLY 102 102 102 GLY GLY A . n A 1 103 VAL 103 103 103 VAL VAL A . n A 1 104 ASN 104 104 104 ASN ASN A . n A 1 105 ASN 105 105 105 ASN ASN A . n A 1 106 PRO 106 106 106 PRO PRO A . n A 1 107 GLU 107 107 107 GLU GLU A . n A 1 108 CYS 108 108 108 CYS CYS A . n A 1 109 SER 109 109 109 SER SER A . n A 1 110 VAL 110 110 110 VAL VAL A . n A 1 111 ILE 111 111 111 ILE ILE A . n A 1 112 GLY 112 112 112 GLY GLY A . n A 1 113 SER 113 113 113 SER SER A . n A 1 114 MET 114 114 114 MET MET A . n A 1 115 ALA 115 115 115 ALA ALA A . n A 1 116 THR 116 116 116 THR THR A . n A 1 117 GLY 117 117 117 GLY GLY A . n A 1 118 GLU 118 118 118 GLU GLU A . n A 1 119 THR 119 119 119 THR THR A . n A 1 120 LYS 120 120 120 LYS LYS A . n A 1 121 THR 121 121 121 THR THR A . n A 1 122 PHE 122 122 122 PHE PHE A . n A 1 123 HIS 123 123 123 HIS HIS A . n A 1 124 CYS 124 124 124 CYS CYS A . n A 1 125 PRO 125 125 125 PRO PRO A . n A 1 126 ALA 126 126 126 ALA ALA A . n A 1 127 PRO 127 127 127 PRO PRO A . n A 1 128 MET 128 128 128 MET MET A . n A 1 129 ILE 129 129 129 ILE ILE A . n A 1 130 GLY 130 130 130 GLY GLY A . n A 1 131 ARG 131 131 131 ARG ARG A . n A 1 132 TYR 132 132 132 TYR TYR A . n A 1 133 VAL 133 133 133 VAL VAL A . n A 1 134 VAL 134 134 134 VAL VAL A . n A 1 135 THR 135 135 135 THR THR A . n A 1 136 TYR 136 136 136 TYR TYR A . n A 1 137 LEU 137 137 137 LEU LEU A . n A 1 138 PRO 138 138 138 PRO PRO A . n A 1 139 THR 139 139 139 THR THR A . n A 1 140 SER 140 140 140 SER SER A . n A 1 141 GLU 141 141 141 GLU GLU A . n A 1 142 SER 142 142 142 SER SER A . n A 1 143 LEU 143 143 143 LEU LEU A . n A 1 144 HIS 144 144 144 HIS HIS A . n A 1 145 LEU 145 145 145 LEU LEU A . n A 1 146 CYS 146 146 146 CYS CYS A . n A 1 147 GLU 147 147 147 GLU GLU A . n A 1 148 VAL 148 148 148 VAL VAL A . n A 1 149 GLU 149 149 149 GLU GLU A . n A 1 150 VAL 150 150 150 VAL VAL A . n A 1 151 ASN 151 151 151 ASN ASN A . n A 1 152 VAL 152 152 152 VAL VAL A . n A 1 153 ASP 153 153 153 ASP ASP A . n A 1 154 LYS 154 154 154 LYS LYS A . n A 1 155 PRO 155 155 155 PRO PRO A . n A 1 156 ALA 156 156 156 ALA ALA A . n A 1 157 ALA 157 157 157 ALA ALA A . n A 1 158 ALA 158 158 158 ALA ALA A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FUC 1 159 159 FUC FUC A . C 3 CA 1 160 160 CA CA2 A . D 4 CL 1 301 1 CL CL1 A . E 5 HOH 1 161 161 HOH HOH A . E 5 HOH 2 162 162 HOH HOH A . E 5 HOH 3 163 163 HOH HOH A . E 5 HOH 4 164 164 HOH HOH A . E 5 HOH 5 165 165 HOH HOH A . E 5 HOH 6 166 166 HOH HOH A . E 5 HOH 7 167 167 HOH HOH A . E 5 HOH 8 168 168 HOH HOH A . E 5 HOH 9 169 169 HOH HOH A . E 5 HOH 10 170 170 HOH HOH A . E 5 HOH 11 171 171 HOH HOH A . E 5 HOH 12 172 172 HOH HOH A . E 5 HOH 13 173 173 HOH HOH A . E 5 HOH 14 174 174 HOH HOH A . E 5 HOH 15 175 175 HOH HOH A . E 5 HOH 16 176 176 HOH HOH A . E 5 HOH 17 177 177 HOH HOH A . E 5 HOH 18 178 178 HOH HOH A . E 5 HOH 19 179 179 HOH HOH A . E 5 HOH 20 180 180 HOH HOH A . E 5 HOH 21 181 181 HOH HOH A . E 5 HOH 22 182 182 HOH HOH A . E 5 HOH 23 183 183 HOH HOH A . E 5 HOH 24 184 184 HOH HOH A . E 5 HOH 25 185 185 HOH HOH A . E 5 HOH 26 186 186 HOH HOH A . E 5 HOH 27 187 187 HOH HOH A . E 5 HOH 28 188 188 HOH HOH A . E 5 HOH 29 189 189 HOH HOH A . E 5 HOH 30 190 190 HOH HOH A . E 5 HOH 31 191 191 HOH HOH A . E 5 HOH 32 192 192 HOH HOH A . E 5 HOH 33 193 193 HOH HOH A . E 5 HOH 34 194 194 HOH HOH A . E 5 HOH 35 195 195 HOH HOH A . E 5 HOH 36 196 196 HOH HOH A . E 5 HOH 37 197 197 HOH HOH A . E 5 HOH 38 198 198 HOH HOH A . E 5 HOH 39 199 199 HOH HOH A . E 5 HOH 40 200 200 HOH HOH A . E 5 HOH 41 201 201 HOH HOH A . E 5 HOH 42 202 202 HOH HOH A . E 5 HOH 43 203 203 HOH HOH A . E 5 HOH 44 204 204 HOH HOH A . E 5 HOH 45 205 205 HOH HOH A . E 5 HOH 46 206 206 HOH HOH A . E 5 HOH 47 207 207 HOH HOH A . E 5 HOH 48 208 208 HOH HOH A . E 5 HOH 49 209 209 HOH HOH A . E 5 HOH 50 210 210 HOH HOH A . E 5 HOH 51 211 211 HOH HOH A . E 5 HOH 52 212 212 HOH HOH A . E 5 HOH 53 213 213 HOH HOH A . E 5 HOH 54 214 214 HOH HOH A . E 5 HOH 55 215 215 HOH HOH A . E 5 HOH 56 216 216 HOH HOH A . E 5 HOH 57 217 217 HOH HOH A . E 5 HOH 58 218 218 HOH HOH A . E 5 HOH 59 219 219 HOH HOH A . E 5 HOH 60 220 220 HOH HOH A . E 5 HOH 61 221 221 HOH HOH A . E 5 HOH 62 222 222 HOH HOH A . E 5 HOH 63 223 223 HOH HOH A . E 5 HOH 64 224 224 HOH HOH A . E 5 HOH 65 225 225 HOH HOH A . E 5 HOH 66 226 226 HOH HOH A . E 5 HOH 67 227 227 HOH HOH A . E 5 HOH 68 228 228 HOH HOH A . E 5 HOH 69 229 229 HOH HOH A . E 5 HOH 70 230 230 HOH HOH A . E 5 HOH 71 231 231 HOH HOH A . E 5 HOH 72 232 232 HOH HOH A . E 5 HOH 73 233 233 HOH HOH A . E 5 HOH 74 234 234 HOH HOH A . E 5 HOH 75 235 235 HOH HOH A . E 5 HOH 76 236 236 HOH HOH A . E 5 HOH 77 237 237 HOH HOH A . E 5 HOH 78 238 238 HOH HOH A . E 5 HOH 79 239 239 HOH HOH A . E 5 HOH 80 240 240 HOH HOH A . E 5 HOH 81 241 241 HOH HOH A . E 5 HOH 82 242 242 HOH HOH A . E 5 HOH 83 243 243 HOH HOH A . E 5 HOH 84 244 244 HOH HOH A . E 5 HOH 85 245 245 HOH HOH A . E 5 HOH 86 246 246 HOH HOH A . E 5 HOH 87 247 247 HOH HOH A . E 5 HOH 88 248 248 HOH HOH A . E 5 HOH 89 249 249 HOH HOH A . E 5 HOH 90 250 250 HOH HOH A . E 5 HOH 91 251 251 HOH HOH A . E 5 HOH 92 252 252 HOH HOH A . E 5 HOH 93 253 253 HOH HOH A . E 5 HOH 94 254 254 HOH HOH A . E 5 HOH 95 255 255 HOH HOH A . E 5 HOH 96 256 256 HOH HOH A . E 5 HOH 97 257 257 HOH HOH A . E 5 HOH 98 258 258 HOH HOH A . E 5 HOH 99 260 260 HOH HOH A . E 5 HOH 100 261 261 HOH HOH A . E 5 HOH 101 262 262 HOH HOH A . E 5 HOH 102 264 264 HOH HOH A . E 5 HOH 103 265 265 HOH HOH A . E 5 HOH 104 266 266 HOH HOH A . E 5 HOH 105 267 267 HOH HOH A . E 5 HOH 106 268 268 HOH HOH A . E 5 HOH 107 269 269 HOH HOH A . E 5 HOH 108 270 270 HOH HOH A . E 5 HOH 109 271 271 HOH HOH A . E 5 HOH 110 272 272 HOH HOH A . E 5 HOH 111 273 273 HOH HOH A . E 5 HOH 112 274 274 HOH HOH A . E 5 HOH 113 275 275 HOH HOH A . E 5 HOH 114 276 276 HOH HOH A . E 5 HOH 115 277 277 HOH HOH A . E 5 HOH 116 278 278 HOH HOH A . E 5 HOH 117 279 279 HOH HOH A . E 5 HOH 118 280 280 HOH HOH A . E 5 HOH 119 281 281 HOH HOH A . E 5 HOH 120 282 282 HOH HOH A . E 5 HOH 121 283 283 HOH HOH A . E 5 HOH 122 285 285 HOH HOH A . E 5 HOH 123 286 286 HOH HOH A . E 5 HOH 124 287 287 HOH HOH A . E 5 HOH 125 288 288 HOH HOH A . E 5 HOH 126 289 289 HOH HOH A . E 5 HOH 127 290 290 HOH HOH A . E 5 HOH 128 292 292 HOH HOH A . E 5 HOH 129 293 293 HOH HOH A . E 5 HOH 130 294 294 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A ASN 35 ? A ASN 35 ? 1_555 CA ? C CA . ? A CA 160 ? 1_555 OD1 ? A ASP 38 ? A ASP 38 ? 1_555 75.5 ? 2 O ? A ASN 35 ? A ASN 35 ? 1_555 CA ? C CA . ? A CA 160 ? 1_555 O ? A ASN 40 ? A ASN 40 ? 1_555 164.2 ? 3 OD1 ? A ASP 38 ? A ASP 38 ? 1_555 CA ? C CA . ? A CA 160 ? 1_555 O ? A ASN 40 ? A ASN 40 ? 1_555 91.4 ? 4 O ? A ASN 35 ? A ASN 35 ? 1_555 CA ? C CA . ? A CA 160 ? 1_555 OG ? A SER 49 ? A SER 49 ? 1_555 101.6 ? 5 OD1 ? A ASP 38 ? A ASP 38 ? 1_555 CA ? C CA . ? A CA 160 ? 1_555 OG ? A SER 49 ? A SER 49 ? 1_555 70.6 ? 6 O ? A ASN 40 ? A ASN 40 ? 1_555 CA ? C CA . ? A CA 160 ? 1_555 OG ? A SER 49 ? A SER 49 ? 1_555 81.8 ? 7 O ? A ASN 35 ? A ASN 35 ? 1_555 CA ? C CA . ? A CA 160 ? 1_555 O ? A SER 49 ? A SER 49 ? 1_555 75.9 ? 8 OD1 ? A ASP 38 ? A ASP 38 ? 1_555 CA ? C CA . ? A CA 160 ? 1_555 O ? A SER 49 ? A SER 49 ? 1_555 124.7 ? 9 O ? A ASN 40 ? A ASN 40 ? 1_555 CA ? C CA . ? A CA 160 ? 1_555 O ? A SER 49 ? A SER 49 ? 1_555 119.4 ? 10 OG ? A SER 49 ? A SER 49 ? 1_555 CA ? C CA . ? A CA 160 ? 1_555 O ? A SER 49 ? A SER 49 ? 1_555 70.1 ? 11 O ? A ASN 35 ? A ASN 35 ? 1_555 CA ? C CA . ? A CA 160 ? 1_555 O ? A CYS 146 ? A CYS 146 ? 1_555 101.7 ? 12 OD1 ? A ASP 38 ? A ASP 38 ? 1_555 CA ? C CA . ? A CA 160 ? 1_555 O ? A CYS 146 ? A CYS 146 ? 1_555 158.4 ? 13 O ? A ASN 40 ? A ASN 40 ? 1_555 CA ? C CA . ? A CA 160 ? 1_555 O ? A CYS 146 ? A CYS 146 ? 1_555 87.2 ? 14 OG ? A SER 49 ? A SER 49 ? 1_555 CA ? C CA . ? A CA 160 ? 1_555 O ? A CYS 146 ? A CYS 146 ? 1_555 130.3 ? 15 O ? A SER 49 ? A SER 49 ? 1_555 CA ? C CA . ? A CA 160 ? 1_555 O ? A CYS 146 ? A CYS 146 ? 1_555 73.9 ? 16 O ? A ASN 35 ? A ASN 35 ? 1_555 CA ? C CA . ? A CA 160 ? 1_555 OE1 ? A GLU 147 ? A GLU 147 ? 1_555 90.5 ? 17 OD1 ? A ASP 38 ? A ASP 38 ? 1_555 CA ? C CA . ? A CA 160 ? 1_555 OE1 ? A GLU 147 ? A GLU 147 ? 1_555 76.8 ? 18 O ? A ASN 40 ? A ASN 40 ? 1_555 CA ? C CA . ? A CA 160 ? 1_555 OE1 ? A GLU 147 ? A GLU 147 ? 1_555 77.7 ? 19 OG ? A SER 49 ? A SER 49 ? 1_555 CA ? C CA . ? A CA 160 ? 1_555 OE1 ? A GLU 147 ? A GLU 147 ? 1_555 140.8 ? 20 O ? A SER 49 ? A SER 49 ? 1_555 CA ? C CA . ? A CA 160 ? 1_555 OE1 ? A GLU 147 ? A GLU 147 ? 1_555 148.9 ? 21 O ? A CYS 146 ? A CYS 146 ? 1_555 CA ? C CA . ? A CA 160 ? 1_555 OE1 ? A GLU 147 ? A GLU 147 ? 1_555 81.8 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2002-07-31 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2020-07-29 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Derived calculations' 5 4 'Structure model' 'Refinement description' 6 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp 2 4 'Structure model' entity 3 4 'Structure model' pdbx_chem_comp_identifier 4 4 'Structure model' pdbx_entity_nonpoly 5 4 'Structure model' pdbx_struct_conn_angle 6 4 'Structure model' software 7 4 'Structure model' struct_conn 8 4 'Structure model' struct_site 9 4 'Structure model' struct_site_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_chem_comp.name' 2 4 'Structure model' '_chem_comp.type' 3 4 'Structure model' '_entity.pdbx_description' 4 4 'Structure model' '_pdbx_entity_nonpoly.name' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.value' 16 4 'Structure model' '_struct_conn.pdbx_dist_value' 17 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 18 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 19 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 20 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 21 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 22 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 23 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 24 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 25 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 26 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 27 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 28 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CrystalClear 'data collection' . ? 1 CrystalClear 'data reduction' . ? 2 MLPHARE phasing . ? 3 DM 'model building' . ? 4 CNS refinement 1.1 ? 5 CrystalClear 'data scaling' '(MSC/RIGAKU)' ? 6 DM phasing . ? 7 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ILE A 2 ? ? 76.75 73.62 2 1 LEU A 66 ? ? 78.26 -11.43 3 1 CYS A 82 ? ? -174.74 -177.58 4 1 SER A 100 ? ? 63.51 60.95 5 1 PRO A 138 ? ? -76.04 47.36 6 1 GLU A 147 ? ? -173.90 135.22 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier FUC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 LFucpa FUC 'COMMON NAME' GMML 1.0 a-L-fucopyranose FUC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-L-Fucp FUC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Fuc # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 alpha-L-fucopyranose FUC 3 'CALCIUM ION' CA 4 'CHLORIDE ION' CL 5 water HOH #