data_1KDK # _entry.id 1KDK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.376 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1KDK pdb_00001kdk 10.2210/pdb1kdk/pdb RCSB RCSB014838 ? ? WWPDB D_1000014838 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1D2S '1D2S Crystal Structure Of The N-Terminal Laminin G-Like Domain Of Shbg In Complex With Dihydrotestosterone' unspecified PDB 1F5F 'Crystal Structure Of The N-Terminal G-Domain Of Shbg In Complex With Zinc' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1KDK _pdbx_database_status.recvd_initial_deposition_date 2001-11-13 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Grishkovskaya, I.' 1 'Avvakumov, G.V.' 2 'Hammond, G.L.' 3 'Muller, Y.A.' 4 # _citation.id primary _citation.title 'Resolution of a disordered region at the entrance of the human sex hormone-binding globulin steroid-binding site.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 318 _citation.page_first 621 _citation.page_last 626 _citation.year 2002 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12054810 _citation.pdbx_database_id_DOI '10.1016/S0022-2836(02)00169-9' # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Grishkovskaya, I.' 1 ? primary 'Avvakumov, G.V.' 2 ? primary 'Hammond, G.L.' 3 ? primary 'Muller, Y.A.' 4 ? # _cell.entry_id 1KDK _cell.length_a 103.720 _cell.length_b 103.720 _cell.length_c 85.760 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1KDK _symmetry.space_group_name_H-M 'H 3 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Sex Hormone-Binding Globulin' 19655.336 1 ? ? 'N-terminal LG-domain' ? 2 non-polymer syn 5-ALPHA-DIHYDROTESTOSTERONE 290.440 1 ? ? ? ? 3 water nat water 18.015 89 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;DPPAVHLSNGPGQEPIAVMTFDLTKITKTSSSFEVRTWDPEGVIFYGDTNPKDDWFMLGLRDGRPEIQLHNHWAQLTVGA GPRLDDGRWHQVEVKMEGDSVLLEVDGEEVLRLRQVSGPLTSKRHPIMRIALGGLLFPASNLRLPLVPALDGCLRRDSWL DKQAEISASAPTSLRSC ; _entity_poly.pdbx_seq_one_letter_code_can ;DPPAVHLSNGPGQEPIAVMTFDLTKITKTSSSFEVRTWDPEGVIFYGDTNPKDDWFMLGLRDGRPEIQLHNHWAQLTVGA GPRLDDGRWHQVEVKMEGDSVLLEVDGEEVLRLRQVSGPLTSKRHPIMRIALGGLLFPASNLRLPLVPALDGCLRRDSWL DKQAEISASAPTSLRSC ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 PRO n 1 3 PRO n 1 4 ALA n 1 5 VAL n 1 6 HIS n 1 7 LEU n 1 8 SER n 1 9 ASN n 1 10 GLY n 1 11 PRO n 1 12 GLY n 1 13 GLN n 1 14 GLU n 1 15 PRO n 1 16 ILE n 1 17 ALA n 1 18 VAL n 1 19 MET n 1 20 THR n 1 21 PHE n 1 22 ASP n 1 23 LEU n 1 24 THR n 1 25 LYS n 1 26 ILE n 1 27 THR n 1 28 LYS n 1 29 THR n 1 30 SER n 1 31 SER n 1 32 SER n 1 33 PHE n 1 34 GLU n 1 35 VAL n 1 36 ARG n 1 37 THR n 1 38 TRP n 1 39 ASP n 1 40 PRO n 1 41 GLU n 1 42 GLY n 1 43 VAL n 1 44 ILE n 1 45 PHE n 1 46 TYR n 1 47 GLY n 1 48 ASP n 1 49 THR n 1 50 ASN n 1 51 PRO n 1 52 LYS n 1 53 ASP n 1 54 ASP n 1 55 TRP n 1 56 PHE n 1 57 MET n 1 58 LEU n 1 59 GLY n 1 60 LEU n 1 61 ARG n 1 62 ASP n 1 63 GLY n 1 64 ARG n 1 65 PRO n 1 66 GLU n 1 67 ILE n 1 68 GLN n 1 69 LEU n 1 70 HIS n 1 71 ASN n 1 72 HIS n 1 73 TRP n 1 74 ALA n 1 75 GLN n 1 76 LEU n 1 77 THR n 1 78 VAL n 1 79 GLY n 1 80 ALA n 1 81 GLY n 1 82 PRO n 1 83 ARG n 1 84 LEU n 1 85 ASP n 1 86 ASP n 1 87 GLY n 1 88 ARG n 1 89 TRP n 1 90 HIS n 1 91 GLN n 1 92 VAL n 1 93 GLU n 1 94 VAL n 1 95 LYS n 1 96 MET n 1 97 GLU n 1 98 GLY n 1 99 ASP n 1 100 SER n 1 101 VAL n 1 102 LEU n 1 103 LEU n 1 104 GLU n 1 105 VAL n 1 106 ASP n 1 107 GLY n 1 108 GLU n 1 109 GLU n 1 110 VAL n 1 111 LEU n 1 112 ARG n 1 113 LEU n 1 114 ARG n 1 115 GLN n 1 116 VAL n 1 117 SER n 1 118 GLY n 1 119 PRO n 1 120 LEU n 1 121 THR n 1 122 SER n 1 123 LYS n 1 124 ARG n 1 125 HIS n 1 126 PRO n 1 127 ILE n 1 128 MET n 1 129 ARG n 1 130 ILE n 1 131 ALA n 1 132 LEU n 1 133 GLY n 1 134 GLY n 1 135 LEU n 1 136 LEU n 1 137 PHE n 1 138 PRO n 1 139 ALA n 1 140 SER n 1 141 ASN n 1 142 LEU n 1 143 ARG n 1 144 LEU n 1 145 PRO n 1 146 LEU n 1 147 VAL n 1 148 PRO n 1 149 ALA n 1 150 LEU n 1 151 ASP n 1 152 GLY n 1 153 CYS n 1 154 LEU n 1 155 ARG n 1 156 ARG n 1 157 ASP n 1 158 SER n 1 159 TRP n 1 160 LEU n 1 161 ASP n 1 162 LYS n 1 163 GLN n 1 164 ALA n 1 165 GLU n 1 166 ILE n 1 167 SER n 1 168 ALA n 1 169 SER n 1 170 ALA n 1 171 PRO n 1 172 THR n 1 173 SER n 1 174 LEU n 1 175 ARG n 1 176 SER n 1 177 CYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain JM109 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pGEX-2T _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code SHBG_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;PPAVHLSNGPGQEPIAVMTFDLTKITKTSSSFEVRTWDPEGVIFYGDTNPKDDWFMLGLRDGRPEIQLHNHWAQLTVGAG PRLDDGRWHQVEVKMEGDSVLLEVDGEEVLRLRQVSGHPIMRIALGGLLFPASNLRLPLVPALDGCLRRDSWLDKQAEIS ASAPTSLRSC ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_accession P04278 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1KDK _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 177 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P04278 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 170 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 12 _struct_ref_seq.pdbx_auth_seq_align_end 188 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1KDK ASP A 1 ? UNP P04278 ? ? insertion 12 1 1 1KDK PRO A 119 ? UNP P04278 ? ? insertion 130 2 1 1KDK LEU A 120 ? UNP P04278 ? ? insertion 131 3 1 1KDK THR A 121 ? UNP P04278 ? ? insertion 132 4 1 1KDK SER A 122 ? UNP P04278 ? ? insertion 133 5 1 1KDK LYS A 123 ? UNP P04278 ? ? insertion 134 6 1 1KDK ARG A 124 ? UNP P04278 ? ? insertion 135 7 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DHT non-polymer . 5-ALPHA-DIHYDROTESTOSTERONE ? 'C19 H30 O2' 290.440 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1KDK _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.26 _exptl_crystal.density_percent_sol 45.50 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details 'PEG400, Isopropanol, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'diamond(111), Ge(220)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.93 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE BM14' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline BM14 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.93 # _reflns.entry_id 1KDK _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 40.0 _reflns.d_resolution_high 1.70 _reflns.number_obs 19262 _reflns.number_all 19262 _reflns.percent_possible_obs 98.1 _reflns.pdbx_Rmerge_I_obs 0.064 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 33.1 _reflns.pdbx_redundancy 4.7 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.70 _reflns_shell.d_res_low 1.80 _reflns_shell.percent_possible_all 99.2 _reflns_shell.Rmerge_I_obs 0.37 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1KDK _refine.ls_number_reflns_obs 17326 _refine.ls_number_reflns_all 17326 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_d_res_low 20.0 _refine.ls_d_res_high 1.70 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.194 _refine.ls_R_factor_R_free 0.245 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 1924 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 36.2 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 1D2S _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1389 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 21 _refine_hist.number_atoms_solvent 89 _refine_hist.number_atoms_total 1499 _refine_hist.d_res_high 1.70 _refine_hist.d_res_low 20.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.012 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d 0.037 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 1.70 _refine_ls_shell.d_res_low ? _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_work 0.194 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.245 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 1924 _refine_ls_shell.number_reflns_obs 17326 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _struct.entry_id 1KDK _struct.title 'THE STRUCTURE OF THE N-TERMINAL LG DOMAIN OF SHBG IN CRYSTALS SOAKED WITH EDTA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1KDK _struct_keywords.pdbx_keywords 'TRANSPORT PROTEIN' _struct_keywords.text 'SHBG, DHT, TRANSPORT PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 138 ? LEU A 142 ? PRO A 149 LEU A 153 5 ? 5 HELX_P HELX_P2 2 ASP A 161 ? GLN A 163 ? ASP A 172 GLN A 174 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id disulf1 _struct_conn.conn_type_id disulf _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 153 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 177 _struct_conn.ptnr2_label_atom_id SG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 164 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 188 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.044 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 7 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 5 ? HIS A 6 ? VAL A 16 HIS A 17 A 2 GLY A 152 ? TRP A 159 ? GLY A 163 TRP A 170 A 3 SER A 30 ? THR A 37 ? SER A 41 THR A 48 A 4 HIS A 90 ? GLU A 97 ? HIS A 101 GLU A 108 A 5 SER A 100 ? VAL A 105 ? SER A 111 VAL A 116 A 6 GLU A 108 ? LEU A 113 ? GLU A 119 LEU A 124 B 1 GLN A 75 ? GLY A 79 ? GLN A 86 GLY A 90 B 2 ARG A 64 ? HIS A 70 ? ARG A 75 HIS A 81 B 3 ASP A 54 ? ARG A 61 ? ASP A 65 ARG A 72 B 4 GLY A 42 ? ASN A 50 ? GLY A 53 ASN A 61 B 5 ILE A 127 ? LEU A 132 ? ILE A 138 LEU A 143 B 6 ALA A 17 ? ASP A 22 ? ALA A 28 ASP A 33 B 7 GLU A 165 ? SER A 169 ? GLU A 176 SER A 180 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 5 ? N VAL A 16 O LEU A 154 ? O LEU A 165 A 2 3 O SER A 158 ? O SER A 169 N SER A 32 ? N SER A 43 A 3 4 N PHE A 33 ? N PHE A 44 O VAL A 92 ? O VAL A 103 A 4 5 N LYS A 95 ? N LYS A 106 O LEU A 102 ? O LEU A 113 A 5 6 N VAL A 101 ? N VAL A 112 O LEU A 113 ? O LEU A 124 B 1 2 O VAL A 78 ? O VAL A 89 N ILE A 67 ? N ILE A 78 B 2 3 O GLN A 68 ? O GLN A 79 N MET A 57 ? N MET A 68 B 3 4 O PHE A 56 ? O PHE A 67 N GLY A 47 ? N GLY A 58 B 4 5 N TYR A 46 ? N TYR A 57 O ALA A 131 ? O ALA A 142 B 5 6 O ILE A 130 ? O ILE A 141 N MET A 19 ? N MET A 30 B 6 7 N THR A 20 ? N THR A 31 O SER A 167 ? O SER A 178 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id DHT _struct_site.pdbx_auth_seq_id 301 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 10 _struct_site.details 'BINDING SITE FOR RESIDUE DHT A 301' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 10 SER A 30 ? SER A 41 . ? 1_555 ? 2 AC1 10 SER A 31 ? SER A 42 . ? 1_555 ? 3 AC1 10 GLY A 47 ? GLY A 58 . ? 1_555 ? 4 AC1 10 ASP A 54 ? ASP A 65 . ? 1_555 ? 5 AC1 10 TRP A 55 ? TRP A 66 . ? 1_555 ? 6 AC1 10 ASN A 71 ? ASN A 82 . ? 1_555 ? 7 AC1 10 VAL A 94 ? VAL A 105 . ? 1_555 ? 8 AC1 10 LYS A 123 ? LYS A 134 . ? 1_555 ? 9 AC1 10 LEU A 160 ? LEU A 171 . ? 1_555 ? 10 AC1 10 HOH C . ? HOH A 318 . ? 1_555 ? # _database_PDB_matrix.entry_id 1KDK _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1KDK _atom_sites.fract_transf_matrix[1][1] 0.009641 _atom_sites.fract_transf_matrix[1][2] 0.005566 _atom_sites.fract_transf_matrix[1][3] -0.000001 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011133 _atom_sites.fract_transf_matrix[2][3] -0.000001 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011660 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 12 12 ASP ASP A . n A 1 2 PRO 2 13 13 PRO PRO A . n A 1 3 PRO 3 14 14 PRO PRO A . n A 1 4 ALA 4 15 15 ALA ALA A . n A 1 5 VAL 5 16 16 VAL VAL A . n A 1 6 HIS 6 17 17 HIS HIS A . n A 1 7 LEU 7 18 18 LEU LEU A . n A 1 8 SER 8 19 19 SER SER A . n A 1 9 ASN 9 20 20 ASN ASN A . n A 1 10 GLY 10 21 21 GLY GLY A . n A 1 11 PRO 11 22 22 PRO PRO A . n A 1 12 GLY 12 23 23 GLY GLY A . n A 1 13 GLN 13 24 24 GLN GLN A . n A 1 14 GLU 14 25 25 GLU GLU A . n A 1 15 PRO 15 26 26 PRO PRO A . n A 1 16 ILE 16 27 27 ILE ILE A . n A 1 17 ALA 17 28 28 ALA ALA A . n A 1 18 VAL 18 29 29 VAL VAL A . n A 1 19 MET 19 30 30 MET MET A . n A 1 20 THR 20 31 31 THR THR A . n A 1 21 PHE 21 32 32 PHE PHE A . n A 1 22 ASP 22 33 33 ASP ASP A . n A 1 23 LEU 23 34 34 LEU LEU A . n A 1 24 THR 24 35 35 THR THR A . n A 1 25 LYS 25 36 36 LYS LYS A . n A 1 26 ILE 26 37 37 ILE ILE A . n A 1 27 THR 27 38 38 THR THR A . n A 1 28 LYS 28 39 39 LYS LYS A . n A 1 29 THR 29 40 40 THR THR A . n A 1 30 SER 30 41 41 SER SER A . n A 1 31 SER 31 42 42 SER SER A . n A 1 32 SER 32 43 43 SER SER A . n A 1 33 PHE 33 44 44 PHE PHE A . n A 1 34 GLU 34 45 45 GLU GLU A . n A 1 35 VAL 35 46 46 VAL VAL A . n A 1 36 ARG 36 47 47 ARG ARG A . n A 1 37 THR 37 48 48 THR THR A . n A 1 38 TRP 38 49 49 TRP TRP A . n A 1 39 ASP 39 50 50 ASP ASP A . n A 1 40 PRO 40 51 51 PRO PRO A . n A 1 41 GLU 41 52 52 GLU GLU A . n A 1 42 GLY 42 53 53 GLY GLY A . n A 1 43 VAL 43 54 54 VAL VAL A . n A 1 44 ILE 44 55 55 ILE ILE A . n A 1 45 PHE 45 56 56 PHE PHE A . n A 1 46 TYR 46 57 57 TYR TYR A . n A 1 47 GLY 47 58 58 GLY GLY A . n A 1 48 ASP 48 59 59 ASP ASP A . n A 1 49 THR 49 60 60 THR THR A . n A 1 50 ASN 50 61 61 ASN ASN A . n A 1 51 PRO 51 62 62 PRO PRO A . n A 1 52 LYS 52 63 63 LYS LYS A . n A 1 53 ASP 53 64 64 ASP ASP A . n A 1 54 ASP 54 65 65 ASP ASP A . n A 1 55 TRP 55 66 66 TRP TRP A . n A 1 56 PHE 56 67 67 PHE PHE A . n A 1 57 MET 57 68 68 MET MET A . n A 1 58 LEU 58 69 69 LEU LEU A . n A 1 59 GLY 59 70 70 GLY GLY A . n A 1 60 LEU 60 71 71 LEU LEU A . n A 1 61 ARG 61 72 72 ARG ARG A . n A 1 62 ASP 62 73 73 ASP ASP A . n A 1 63 GLY 63 74 74 GLY GLY A . n A 1 64 ARG 64 75 75 ARG ARG A . n A 1 65 PRO 65 76 76 PRO PRO A . n A 1 66 GLU 66 77 77 GLU GLU A . n A 1 67 ILE 67 78 78 ILE ILE A . n A 1 68 GLN 68 79 79 GLN GLN A . n A 1 69 LEU 69 80 80 LEU LEU A . n A 1 70 HIS 70 81 81 HIS HIS A . n A 1 71 ASN 71 82 82 ASN ASN A . n A 1 72 HIS 72 83 83 HIS HIS A . n A 1 73 TRP 73 84 84 TRP TRP A . n A 1 74 ALA 74 85 85 ALA ALA A . n A 1 75 GLN 75 86 86 GLN GLN A . n A 1 76 LEU 76 87 87 LEU LEU A . n A 1 77 THR 77 88 88 THR THR A . n A 1 78 VAL 78 89 89 VAL VAL A . n A 1 79 GLY 79 90 90 GLY GLY A . n A 1 80 ALA 80 91 91 ALA ALA A . n A 1 81 GLY 81 92 92 GLY GLY A . n A 1 82 PRO 82 93 93 PRO PRO A . n A 1 83 ARG 83 94 94 ARG ARG A . n A 1 84 LEU 84 95 95 LEU LEU A . n A 1 85 ASP 85 96 96 ASP ASP A . n A 1 86 ASP 86 97 97 ASP ASP A . n A 1 87 GLY 87 98 98 GLY GLY A . n A 1 88 ARG 88 99 99 ARG ARG A . n A 1 89 TRP 89 100 100 TRP TRP A . n A 1 90 HIS 90 101 101 HIS HIS A . n A 1 91 GLN 91 102 102 GLN GLN A . n A 1 92 VAL 92 103 103 VAL VAL A . n A 1 93 GLU 93 104 104 GLU GLU A . n A 1 94 VAL 94 105 105 VAL VAL A . n A 1 95 LYS 95 106 106 LYS LYS A . n A 1 96 MET 96 107 107 MET MET A . n A 1 97 GLU 97 108 108 GLU GLU A . n A 1 98 GLY 98 109 109 GLY GLY A . n A 1 99 ASP 99 110 110 ASP ASP A . n A 1 100 SER 100 111 111 SER SER A . n A 1 101 VAL 101 112 112 VAL VAL A . n A 1 102 LEU 102 113 113 LEU LEU A . n A 1 103 LEU 103 114 114 LEU LEU A . n A 1 104 GLU 104 115 115 GLU GLU A . n A 1 105 VAL 105 116 116 VAL VAL A . n A 1 106 ASP 106 117 117 ASP ASP A . n A 1 107 GLY 107 118 118 GLY GLY A . n A 1 108 GLU 108 119 119 GLU GLU A . n A 1 109 GLU 109 120 120 GLU GLU A . n A 1 110 VAL 110 121 121 VAL VAL A . n A 1 111 LEU 111 122 122 LEU LEU A . n A 1 112 ARG 112 123 123 ARG ARG A . n A 1 113 LEU 113 124 124 LEU LEU A . n A 1 114 ARG 114 125 125 ARG ARG A . n A 1 115 GLN 115 126 126 GLN GLN A . n A 1 116 VAL 116 127 127 VAL VAL A . n A 1 117 SER 117 128 128 SER SER A . n A 1 118 GLY 118 129 129 GLY GLY A . n A 1 119 PRO 119 130 130 PRO PRO A . n A 1 120 LEU 120 131 131 LEU LEU A . n A 1 121 THR 121 132 132 THR THR A . n A 1 122 SER 122 133 133 SER SER A . n A 1 123 LYS 123 134 134 LYS LYS A . n A 1 124 ARG 124 135 135 ARG ARG A . n A 1 125 HIS 125 136 136 HIS HIS A . n A 1 126 PRO 126 137 137 PRO PRO A . n A 1 127 ILE 127 138 138 ILE ILE A . n A 1 128 MET 128 139 139 MET MET A . n A 1 129 ARG 129 140 140 ARG ARG A . n A 1 130 ILE 130 141 141 ILE ILE A . n A 1 131 ALA 131 142 142 ALA ALA A . n A 1 132 LEU 132 143 143 LEU LEU A . n A 1 133 GLY 133 144 144 GLY GLY A . n A 1 134 GLY 134 145 145 GLY GLY A . n A 1 135 LEU 135 146 146 LEU LEU A . n A 1 136 LEU 136 147 147 LEU LEU A . n A 1 137 PHE 137 148 148 PHE PHE A . n A 1 138 PRO 138 149 149 PRO PRO A . n A 1 139 ALA 139 150 150 ALA ALA A . n A 1 140 SER 140 151 151 SER SER A . n A 1 141 ASN 141 152 152 ASN ASN A . n A 1 142 LEU 142 153 153 LEU LEU A . n A 1 143 ARG 143 154 154 ARG ARG A . n A 1 144 LEU 144 155 155 LEU LEU A . n A 1 145 PRO 145 156 156 PRO PRO A . n A 1 146 LEU 146 157 157 LEU LEU A . n A 1 147 VAL 147 158 158 VAL VAL A . n A 1 148 PRO 148 159 159 PRO PRO A . n A 1 149 ALA 149 160 160 ALA ALA A . n A 1 150 LEU 150 161 161 LEU LEU A . n A 1 151 ASP 151 162 162 ASP ASP A . n A 1 152 GLY 152 163 163 GLY GLY A . n A 1 153 CYS 153 164 164 CYS CYS A . n A 1 154 LEU 154 165 165 LEU LEU A . n A 1 155 ARG 155 166 166 ARG ARG A . n A 1 156 ARG 156 167 167 ARG ARG A . n A 1 157 ASP 157 168 168 ASP ASP A . n A 1 158 SER 158 169 169 SER SER A . n A 1 159 TRP 159 170 170 TRP TRP A . n A 1 160 LEU 160 171 171 LEU LEU A . n A 1 161 ASP 161 172 172 ASP ASP A . n A 1 162 LYS 162 173 173 LYS LYS A . n A 1 163 GLN 163 174 174 GLN GLN A . n A 1 164 ALA 164 175 175 ALA ALA A . n A 1 165 GLU 165 176 176 GLU GLU A . n A 1 166 ILE 166 177 177 ILE ILE A . n A 1 167 SER 167 178 178 SER SER A . n A 1 168 ALA 168 179 179 ALA ALA A . n A 1 169 SER 169 180 180 SER SER A . n A 1 170 ALA 170 181 181 ALA ALA A . n A 1 171 PRO 171 182 182 PRO PRO A . n A 1 172 THR 172 183 183 THR THR A . n A 1 173 SER 173 184 184 SER SER A . n A 1 174 LEU 174 185 185 LEU LEU A . n A 1 175 ARG 175 186 186 ARG ARG A . n A 1 176 SER 176 187 187 SER SER A . n A 1 177 CYS 177 188 188 CYS CYS A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DHT 1 301 301 DHT DHT A . C 3 HOH 1 302 1 HOH HOH A . C 3 HOH 2 303 2 HOH HOH A . C 3 HOH 3 304 3 HOH HOH A . C 3 HOH 4 305 4 HOH HOH A . C 3 HOH 5 306 5 HOH HOH A . C 3 HOH 6 307 6 HOH HOH A . C 3 HOH 7 308 7 HOH HOH A . C 3 HOH 8 309 8 HOH HOH A . C 3 HOH 9 310 9 HOH HOH A . C 3 HOH 10 311 10 HOH HOH A . C 3 HOH 11 312 11 HOH HOH A . C 3 HOH 12 313 12 HOH HOH A . C 3 HOH 13 314 13 HOH HOH A . C 3 HOH 14 315 14 HOH HOH A . C 3 HOH 15 316 15 HOH HOH A . C 3 HOH 16 317 16 HOH HOH A . C 3 HOH 17 318 17 HOH HOH A . C 3 HOH 18 319 18 HOH HOH A . C 3 HOH 19 320 19 HOH HOH A . C 3 HOH 20 321 20 HOH HOH A . C 3 HOH 21 322 21 HOH HOH A . C 3 HOH 22 323 22 HOH HOH A . C 3 HOH 23 324 23 HOH HOH A . C 3 HOH 24 325 24 HOH HOH A . C 3 HOH 25 326 25 HOH HOH A . C 3 HOH 26 327 26 HOH HOH A . C 3 HOH 27 328 27 HOH HOH A . C 3 HOH 28 329 28 HOH HOH A . C 3 HOH 29 330 29 HOH HOH A . C 3 HOH 30 331 30 HOH HOH A . C 3 HOH 31 332 31 HOH HOH A . C 3 HOH 32 333 32 HOH HOH A . C 3 HOH 33 334 33 HOH HOH A . C 3 HOH 34 335 34 HOH HOH A . C 3 HOH 35 336 35 HOH HOH A . C 3 HOH 36 337 36 HOH HOH A . C 3 HOH 37 338 37 HOH HOH A . C 3 HOH 38 339 38 HOH HOH A . C 3 HOH 39 340 39 HOH HOH A . C 3 HOH 40 341 40 HOH HOH A . C 3 HOH 41 342 41 HOH HOH A . C 3 HOH 42 343 42 HOH HOH A . C 3 HOH 43 344 43 HOH HOH A . C 3 HOH 44 345 44 HOH HOH A . C 3 HOH 45 346 45 HOH HOH A . C 3 HOH 46 347 46 HOH HOH A . C 3 HOH 47 348 47 HOH HOH A . C 3 HOH 48 349 48 HOH HOH A . C 3 HOH 49 350 49 HOH HOH A . C 3 HOH 50 351 50 HOH HOH A . C 3 HOH 51 352 51 HOH HOH A . C 3 HOH 52 353 52 HOH HOH A . C 3 HOH 53 354 53 HOH HOH A . C 3 HOH 54 355 54 HOH HOH A . C 3 HOH 55 356 55 HOH HOH A . C 3 HOH 56 357 56 HOH HOH A . C 3 HOH 57 358 57 HOH HOH A . C 3 HOH 58 359 58 HOH HOH A . C 3 HOH 59 360 59 HOH HOH A . C 3 HOH 60 361 60 HOH HOH A . C 3 HOH 61 362 61 HOH HOH A . C 3 HOH 62 363 62 HOH HOH A . C 3 HOH 63 364 63 HOH HOH A . C 3 HOH 64 365 64 HOH HOH A . C 3 HOH 65 366 65 HOH HOH A . C 3 HOH 66 367 66 HOH HOH A . C 3 HOH 67 368 67 HOH HOH A . C 3 HOH 68 369 68 HOH HOH A . C 3 HOH 69 370 69 HOH HOH A . C 3 HOH 70 371 70 HOH HOH A . C 3 HOH 71 372 71 HOH HOH A . C 3 HOH 72 373 72 HOH HOH A . C 3 HOH 73 374 73 HOH HOH A . C 3 HOH 74 375 74 HOH HOH A . C 3 HOH 75 376 75 HOH HOH A . C 3 HOH 76 377 76 HOH HOH A . C 3 HOH 77 378 77 HOH HOH A . C 3 HOH 78 379 78 HOH HOH A . C 3 HOH 79 380 79 HOH HOH A . C 3 HOH 80 381 80 HOH HOH A . C 3 HOH 81 382 81 HOH HOH A . C 3 HOH 82 383 82 HOH HOH A . C 3 HOH 83 384 83 HOH HOH A . C 3 HOH 84 385 84 HOH HOH A . C 3 HOH 85 386 85 HOH HOH A . C 3 HOH 86 387 86 HOH HOH A . C 3 HOH 87 388 87 HOH HOH A . C 3 HOH 88 389 88 HOH HOH A . C 3 HOH 89 390 89 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 5_556 x-y,-y,-z+1 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 85.7600000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2002-05-15 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-08-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' software 6 4 'Structure model' struct_ref_seq_dif 7 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_ref_seq_dif.details' 4 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MAR345 'data collection' . ? 1 XDS 'data reduction' . ? 2 REFMAC refinement . ? 3 XDS 'data scaling' . ? 4 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OD2 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ASP _pdbx_validate_close_contact.auth_seq_id_1 50 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 311 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.19 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A PHE 56 ? ? CG A PHE 56 ? ? CD2 A PHE 56 ? ? 116.58 120.80 -4.22 0.70 N 2 1 CB A PHE 56 ? ? CG A PHE 56 ? ? CD1 A PHE 56 ? ? 125.90 120.80 5.10 0.70 N 3 1 CG A MET 68 ? ? SD A MET 68 ? ? CE A MET 68 ? ? 112.54 100.20 12.34 1.60 N 4 1 NE A ARG 72 ? ? CZ A ARG 72 ? ? NH2 A ARG 72 ? ? 116.10 120.30 -4.20 0.50 N 5 1 CB A ASP 73 ? ? CG A ASP 73 ? ? OD1 A ASP 73 ? ? 124.67 118.30 6.37 0.90 N 6 1 NE A ARG 75 ? ? CZ A ARG 75 ? ? NH1 A ARG 75 ? ? 127.07 120.30 6.77 0.50 N 7 1 NE A ARG 75 ? ? CZ A ARG 75 ? ? NH2 A ARG 75 ? ? 116.87 120.30 -3.43 0.50 N 8 1 CA A LEU 80 ? ? CB A LEU 80 ? ? CG A LEU 80 ? ? 130.23 115.30 14.93 2.30 N 9 1 NE A ARG 94 ? ? CZ A ARG 94 ? ? NH1 A ARG 94 ? ? 116.17 120.30 -4.13 0.50 N 10 1 CB A ASP 96 ? ? CG A ASP 96 ? ? OD1 A ASP 96 ? ? 123.78 118.30 5.48 0.90 N 11 1 CB A ASP 96 ? ? CG A ASP 96 ? ? OD2 A ASP 96 ? ? 112.17 118.30 -6.13 0.90 N 12 1 CA A LYS 106 ? ? CB A LYS 106 ? ? CG A LYS 106 ? ? 128.32 113.40 14.92 2.20 N 13 1 CA A GLU 108 ? ? CB A GLU 108 ? ? CG A GLU 108 ? ? 127.07 113.40 13.67 2.20 N 14 1 CB A ASP 110 ? ? CG A ASP 110 ? ? OD1 A ASP 110 ? ? 112.12 118.30 -6.18 0.90 N 15 1 NE A ARG 123 ? ? CZ A ARG 123 ? ? NH2 A ARG 123 ? ? 116.32 120.30 -3.98 0.50 N 16 1 CD A ARG 125 ? B NE A ARG 125 ? B CZ A ARG 125 ? B 137.00 123.60 13.40 1.40 N 17 1 NE A ARG 125 ? B CZ A ARG 125 ? B NH1 A ARG 125 ? B 126.06 120.30 5.76 0.50 N 18 1 NE A ARG 125 ? B CZ A ARG 125 ? B NH2 A ARG 125 ? B 113.64 120.30 -6.66 0.50 N 19 1 CD A ARG 135 ? ? NE A ARG 135 ? ? CZ A ARG 135 ? ? 137.72 123.60 14.12 1.40 N 20 1 NE A ARG 140 ? ? CZ A ARG 140 ? ? NH2 A ARG 140 ? ? 124.26 120.30 3.96 0.50 N 21 1 NH1 A ARG 154 ? ? CZ A ARG 154 ? ? NH2 A ARG 154 ? ? 127.82 119.40 8.42 1.10 N 22 1 NE A ARG 154 ? ? CZ A ARG 154 ? ? NH1 A ARG 154 ? ? 110.54 120.30 -9.76 0.50 N 23 1 CD A ARG 167 ? ? NE A ARG 167 ? ? CZ A ARG 167 ? ? 135.29 123.60 11.69 1.40 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 14 ? ? 4.70 86.29 2 1 GLN A 24 ? ? -109.40 -63.59 3 1 THR A 38 ? ? -123.49 -56.58 4 1 THR A 40 ? ? -109.08 61.81 5 1 ASP A 96 ? ? -96.76 44.01 6 1 PRO A 130 ? ? -47.29 155.53 7 1 SER A 133 ? ? 166.25 -31.89 8 1 ARG A 135 ? ? -38.88 -115.62 9 1 LEU A 171 ? ? 49.05 -135.83 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASP 12 ? CG ? A ASP 1 CG 2 1 Y 1 A ASP 12 ? OD1 ? A ASP 1 OD1 3 1 Y 1 A ASP 12 ? OD2 ? A ASP 1 OD2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DHT C1 C N N 88 DHT C2 C N N 89 DHT C3 C N N 90 DHT O3 O N N 91 DHT C4 C N N 92 DHT C5 C N S 93 DHT C6 C N N 94 DHT C7 C N N 95 DHT C8 C N R 96 DHT C9 C N S 97 DHT C10 C N S 98 DHT C11 C N N 99 DHT C12 C N N 100 DHT C13 C N S 101 DHT C14 C N S 102 DHT C15 C N N 103 DHT C16 C N N 104 DHT C17 C N S 105 DHT O17 O N N 106 DHT C18 C N N 107 DHT C19 C N N 108 DHT H11 H N N 109 DHT H12 H N N 110 DHT H21 H N N 111 DHT H22 H N N 112 DHT H41 H N N 113 DHT H42 H N N 114 DHT H5 H N N 115 DHT H61 H N N 116 DHT H62 H N N 117 DHT H71 H N N 118 DHT H72 H N N 119 DHT H8 H N N 120 DHT H9 H N N 121 DHT H111 H N N 122 DHT H112 H N N 123 DHT H121 H N N 124 DHT H122 H N N 125 DHT H14 H N N 126 DHT H151 H N N 127 DHT H152 H N N 128 DHT H161 H N N 129 DHT H162 H N N 130 DHT H17 H N N 131 DHT HO7 H N N 132 DHT H181 H N N 133 DHT H182 H N N 134 DHT H183 H N N 135 DHT H191 H N N 136 DHT H192 H N N 137 DHT H193 H N N 138 GLN N N N N 139 GLN CA C N S 140 GLN C C N N 141 GLN O O N N 142 GLN CB C N N 143 GLN CG C N N 144 GLN CD C N N 145 GLN OE1 O N N 146 GLN NE2 N N N 147 GLN OXT O N N 148 GLN H H N N 149 GLN H2 H N N 150 GLN HA H N N 151 GLN HB2 H N N 152 GLN HB3 H N N 153 GLN HG2 H N N 154 GLN HG3 H N N 155 GLN HE21 H N N 156 GLN HE22 H N N 157 GLN HXT H N N 158 GLU N N N N 159 GLU CA C N S 160 GLU C C N N 161 GLU O O N N 162 GLU CB C N N 163 GLU CG C N N 164 GLU CD C N N 165 GLU OE1 O N N 166 GLU OE2 O N N 167 GLU OXT O N N 168 GLU H H N N 169 GLU H2 H N N 170 GLU HA H N N 171 GLU HB2 H N N 172 GLU HB3 H N N 173 GLU HG2 H N N 174 GLU HG3 H N N 175 GLU HE2 H N N 176 GLU HXT H N N 177 GLY N N N N 178 GLY CA C N N 179 GLY C C N N 180 GLY O O N N 181 GLY OXT O N N 182 GLY H H N N 183 GLY H2 H N N 184 GLY HA2 H N N 185 GLY HA3 H N N 186 GLY HXT H N N 187 HIS N N N N 188 HIS CA C N S 189 HIS C C N N 190 HIS O O N N 191 HIS CB C N N 192 HIS CG C Y N 193 HIS ND1 N Y N 194 HIS CD2 C Y N 195 HIS CE1 C Y N 196 HIS NE2 N Y N 197 HIS OXT O N N 198 HIS H H N N 199 HIS H2 H N N 200 HIS HA H N N 201 HIS HB2 H N N 202 HIS HB3 H N N 203 HIS HD1 H N N 204 HIS HD2 H N N 205 HIS HE1 H N N 206 HIS HE2 H N N 207 HIS HXT H N N 208 HOH O O N N 209 HOH H1 H N N 210 HOH H2 H N N 211 ILE N N N N 212 ILE CA C N S 213 ILE C C N N 214 ILE O O N N 215 ILE CB C N S 216 ILE CG1 C N N 217 ILE CG2 C N N 218 ILE CD1 C N N 219 ILE OXT O N N 220 ILE H H N N 221 ILE H2 H N N 222 ILE HA H N N 223 ILE HB H N N 224 ILE HG12 H N N 225 ILE HG13 H N N 226 ILE HG21 H N N 227 ILE HG22 H N N 228 ILE HG23 H N N 229 ILE HD11 H N N 230 ILE HD12 H N N 231 ILE HD13 H N N 232 ILE HXT H N N 233 LEU N N N N 234 LEU CA C N S 235 LEU C C N N 236 LEU O O N N 237 LEU CB C N N 238 LEU CG C N N 239 LEU CD1 C N N 240 LEU CD2 C N N 241 LEU OXT O N N 242 LEU H H N N 243 LEU H2 H N N 244 LEU HA H N N 245 LEU HB2 H N N 246 LEU HB3 H N N 247 LEU HG H N N 248 LEU HD11 H N N 249 LEU HD12 H N N 250 LEU HD13 H N N 251 LEU HD21 H N N 252 LEU HD22 H N N 253 LEU HD23 H N N 254 LEU HXT H N N 255 LYS N N N N 256 LYS CA C N S 257 LYS C C N N 258 LYS O O N N 259 LYS CB C N N 260 LYS CG C N N 261 LYS CD C N N 262 LYS CE C N N 263 LYS NZ N N N 264 LYS OXT O N N 265 LYS H H N N 266 LYS H2 H N N 267 LYS HA H N N 268 LYS HB2 H N N 269 LYS HB3 H N N 270 LYS HG2 H N N 271 LYS HG3 H N N 272 LYS HD2 H N N 273 LYS HD3 H N N 274 LYS HE2 H N N 275 LYS HE3 H N N 276 LYS HZ1 H N N 277 LYS HZ2 H N N 278 LYS HZ3 H N N 279 LYS HXT H N N 280 MET N N N N 281 MET CA C N S 282 MET C C N N 283 MET O O N N 284 MET CB C N N 285 MET CG C N N 286 MET SD S N N 287 MET CE C N N 288 MET OXT O N N 289 MET H H N N 290 MET H2 H N N 291 MET HA H N N 292 MET HB2 H N N 293 MET HB3 H N N 294 MET HG2 H N N 295 MET HG3 H N N 296 MET HE1 H N N 297 MET HE2 H N N 298 MET HE3 H N N 299 MET HXT H N N 300 PHE N N N N 301 PHE CA C N S 302 PHE C C N N 303 PHE O O N N 304 PHE CB C N N 305 PHE CG C Y N 306 PHE CD1 C Y N 307 PHE CD2 C Y N 308 PHE CE1 C Y N 309 PHE CE2 C Y N 310 PHE CZ C Y N 311 PHE OXT O N N 312 PHE H H N N 313 PHE H2 H N N 314 PHE HA H N N 315 PHE HB2 H N N 316 PHE HB3 H N N 317 PHE HD1 H N N 318 PHE HD2 H N N 319 PHE HE1 H N N 320 PHE HE2 H N N 321 PHE HZ H N N 322 PHE HXT H N N 323 PRO N N N N 324 PRO CA C N S 325 PRO C C N N 326 PRO O O N N 327 PRO CB C N N 328 PRO CG C N N 329 PRO CD C N N 330 PRO OXT O N N 331 PRO H H N N 332 PRO HA H N N 333 PRO HB2 H N N 334 PRO HB3 H N N 335 PRO HG2 H N N 336 PRO HG3 H N N 337 PRO HD2 H N N 338 PRO HD3 H N N 339 PRO HXT H N N 340 SER N N N N 341 SER CA C N S 342 SER C C N N 343 SER O O N N 344 SER CB C N N 345 SER OG O N N 346 SER OXT O N N 347 SER H H N N 348 SER H2 H N N 349 SER HA H N N 350 SER HB2 H N N 351 SER HB3 H N N 352 SER HG H N N 353 SER HXT H N N 354 THR N N N N 355 THR CA C N S 356 THR C C N N 357 THR O O N N 358 THR CB C N R 359 THR OG1 O N N 360 THR CG2 C N N 361 THR OXT O N N 362 THR H H N N 363 THR H2 H N N 364 THR HA H N N 365 THR HB H N N 366 THR HG1 H N N 367 THR HG21 H N N 368 THR HG22 H N N 369 THR HG23 H N N 370 THR HXT H N N 371 TRP N N N N 372 TRP CA C N S 373 TRP C C N N 374 TRP O O N N 375 TRP CB C N N 376 TRP CG C Y N 377 TRP CD1 C Y N 378 TRP CD2 C Y N 379 TRP NE1 N Y N 380 TRP CE2 C Y N 381 TRP CE3 C Y N 382 TRP CZ2 C Y N 383 TRP CZ3 C Y N 384 TRP CH2 C Y N 385 TRP OXT O N N 386 TRP H H N N 387 TRP H2 H N N 388 TRP HA H N N 389 TRP HB2 H N N 390 TRP HB3 H N N 391 TRP HD1 H N N 392 TRP HE1 H N N 393 TRP HE3 H N N 394 TRP HZ2 H N N 395 TRP HZ3 H N N 396 TRP HH2 H N N 397 TRP HXT H N N 398 TYR N N N N 399 TYR CA C N S 400 TYR C C N N 401 TYR O O N N 402 TYR CB C N N 403 TYR CG C Y N 404 TYR CD1 C Y N 405 TYR CD2 C Y N 406 TYR CE1 C Y N 407 TYR CE2 C Y N 408 TYR CZ C Y N 409 TYR OH O N N 410 TYR OXT O N N 411 TYR H H N N 412 TYR H2 H N N 413 TYR HA H N N 414 TYR HB2 H N N 415 TYR HB3 H N N 416 TYR HD1 H N N 417 TYR HD2 H N N 418 TYR HE1 H N N 419 TYR HE2 H N N 420 TYR HH H N N 421 TYR HXT H N N 422 VAL N N N N 423 VAL CA C N S 424 VAL C C N N 425 VAL O O N N 426 VAL CB C N N 427 VAL CG1 C N N 428 VAL CG2 C N N 429 VAL OXT O N N 430 VAL H H N N 431 VAL H2 H N N 432 VAL HA H N N 433 VAL HB H N N 434 VAL HG11 H N N 435 VAL HG12 H N N 436 VAL HG13 H N N 437 VAL HG21 H N N 438 VAL HG22 H N N 439 VAL HG23 H N N 440 VAL HXT H N N 441 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DHT C1 C2 sing N N 83 DHT C1 C10 sing N N 84 DHT C1 H11 sing N N 85 DHT C1 H12 sing N N 86 DHT C2 C3 sing N N 87 DHT C2 H21 sing N N 88 DHT C2 H22 sing N N 89 DHT C3 O3 doub N N 90 DHT C3 C4 sing N N 91 DHT C4 C5 sing N N 92 DHT C4 H41 sing N N 93 DHT C4 H42 sing N N 94 DHT C5 C6 sing N N 95 DHT C5 C10 sing N N 96 DHT C5 H5 sing N N 97 DHT C6 C7 sing N N 98 DHT C6 H61 sing N N 99 DHT C6 H62 sing N N 100 DHT C7 C8 sing N N 101 DHT C7 H71 sing N N 102 DHT C7 H72 sing N N 103 DHT C8 C9 sing N N 104 DHT C8 C14 sing N N 105 DHT C8 H8 sing N N 106 DHT C9 C10 sing N N 107 DHT C9 C11 sing N N 108 DHT C9 H9 sing N N 109 DHT C10 C19 sing N N 110 DHT C11 C12 sing N N 111 DHT C11 H111 sing N N 112 DHT C11 H112 sing N N 113 DHT C12 C13 sing N N 114 DHT C12 H121 sing N N 115 DHT C12 H122 sing N N 116 DHT C13 C14 sing N N 117 DHT C13 C17 sing N N 118 DHT C13 C18 sing N N 119 DHT C14 C15 sing N N 120 DHT C14 H14 sing N N 121 DHT C15 C16 sing N N 122 DHT C15 H151 sing N N 123 DHT C15 H152 sing N N 124 DHT C16 C17 sing N N 125 DHT C16 H161 sing N N 126 DHT C16 H162 sing N N 127 DHT C17 O17 sing N N 128 DHT C17 H17 sing N N 129 DHT O17 HO7 sing N N 130 DHT C18 H181 sing N N 131 DHT C18 H182 sing N N 132 DHT C18 H183 sing N N 133 DHT C19 H191 sing N N 134 DHT C19 H192 sing N N 135 DHT C19 H193 sing N N 136 GLN N CA sing N N 137 GLN N H sing N N 138 GLN N H2 sing N N 139 GLN CA C sing N N 140 GLN CA CB sing N N 141 GLN CA HA sing N N 142 GLN C O doub N N 143 GLN C OXT sing N N 144 GLN CB CG sing N N 145 GLN CB HB2 sing N N 146 GLN CB HB3 sing N N 147 GLN CG CD sing N N 148 GLN CG HG2 sing N N 149 GLN CG HG3 sing N N 150 GLN CD OE1 doub N N 151 GLN CD NE2 sing N N 152 GLN NE2 HE21 sing N N 153 GLN NE2 HE22 sing N N 154 GLN OXT HXT sing N N 155 GLU N CA sing N N 156 GLU N H sing N N 157 GLU N H2 sing N N 158 GLU CA C sing N N 159 GLU CA CB sing N N 160 GLU CA HA sing N N 161 GLU C O doub N N 162 GLU C OXT sing N N 163 GLU CB CG sing N N 164 GLU CB HB2 sing N N 165 GLU CB HB3 sing N N 166 GLU CG CD sing N N 167 GLU CG HG2 sing N N 168 GLU CG HG3 sing N N 169 GLU CD OE1 doub N N 170 GLU CD OE2 sing N N 171 GLU OE2 HE2 sing N N 172 GLU OXT HXT sing N N 173 GLY N CA sing N N 174 GLY N H sing N N 175 GLY N H2 sing N N 176 GLY CA C sing N N 177 GLY CA HA2 sing N N 178 GLY CA HA3 sing N N 179 GLY C O doub N N 180 GLY C OXT sing N N 181 GLY OXT HXT sing N N 182 HIS N CA sing N N 183 HIS N H sing N N 184 HIS N H2 sing N N 185 HIS CA C sing N N 186 HIS CA CB sing N N 187 HIS CA HA sing N N 188 HIS C O doub N N 189 HIS C OXT sing N N 190 HIS CB CG sing N N 191 HIS CB HB2 sing N N 192 HIS CB HB3 sing N N 193 HIS CG ND1 sing Y N 194 HIS CG CD2 doub Y N 195 HIS ND1 CE1 doub Y N 196 HIS ND1 HD1 sing N N 197 HIS CD2 NE2 sing Y N 198 HIS CD2 HD2 sing N N 199 HIS CE1 NE2 sing Y N 200 HIS CE1 HE1 sing N N 201 HIS NE2 HE2 sing N N 202 HIS OXT HXT sing N N 203 HOH O H1 sing N N 204 HOH O H2 sing N N 205 ILE N CA sing N N 206 ILE N H sing N N 207 ILE N H2 sing N N 208 ILE CA C sing N N 209 ILE CA CB sing N N 210 ILE CA HA sing N N 211 ILE C O doub N N 212 ILE C OXT sing N N 213 ILE CB CG1 sing N N 214 ILE CB CG2 sing N N 215 ILE CB HB sing N N 216 ILE CG1 CD1 sing N N 217 ILE CG1 HG12 sing N N 218 ILE CG1 HG13 sing N N 219 ILE CG2 HG21 sing N N 220 ILE CG2 HG22 sing N N 221 ILE CG2 HG23 sing N N 222 ILE CD1 HD11 sing N N 223 ILE CD1 HD12 sing N N 224 ILE CD1 HD13 sing N N 225 ILE OXT HXT sing N N 226 LEU N CA sing N N 227 LEU N H sing N N 228 LEU N H2 sing N N 229 LEU CA C sing N N 230 LEU CA CB sing N N 231 LEU CA HA sing N N 232 LEU C O doub N N 233 LEU C OXT sing N N 234 LEU CB CG sing N N 235 LEU CB HB2 sing N N 236 LEU CB HB3 sing N N 237 LEU CG CD1 sing N N 238 LEU CG CD2 sing N N 239 LEU CG HG sing N N 240 LEU CD1 HD11 sing N N 241 LEU CD1 HD12 sing N N 242 LEU CD1 HD13 sing N N 243 LEU CD2 HD21 sing N N 244 LEU CD2 HD22 sing N N 245 LEU CD2 HD23 sing N N 246 LEU OXT HXT sing N N 247 LYS N CA sing N N 248 LYS N H sing N N 249 LYS N H2 sing N N 250 LYS CA C sing N N 251 LYS CA CB sing N N 252 LYS CA HA sing N N 253 LYS C O doub N N 254 LYS C OXT sing N N 255 LYS CB CG sing N N 256 LYS CB HB2 sing N N 257 LYS CB HB3 sing N N 258 LYS CG CD sing N N 259 LYS CG HG2 sing N N 260 LYS CG HG3 sing N N 261 LYS CD CE sing N N 262 LYS CD HD2 sing N N 263 LYS CD HD3 sing N N 264 LYS CE NZ sing N N 265 LYS CE HE2 sing N N 266 LYS CE HE3 sing N N 267 LYS NZ HZ1 sing N N 268 LYS NZ HZ2 sing N N 269 LYS NZ HZ3 sing N N 270 LYS OXT HXT sing N N 271 MET N CA sing N N 272 MET N H sing N N 273 MET N H2 sing N N 274 MET CA C sing N N 275 MET CA CB sing N N 276 MET CA HA sing N N 277 MET C O doub N N 278 MET C OXT sing N N 279 MET CB CG sing N N 280 MET CB HB2 sing N N 281 MET CB HB3 sing N N 282 MET CG SD sing N N 283 MET CG HG2 sing N N 284 MET CG HG3 sing N N 285 MET SD CE sing N N 286 MET CE HE1 sing N N 287 MET CE HE2 sing N N 288 MET CE HE3 sing N N 289 MET OXT HXT sing N N 290 PHE N CA sing N N 291 PHE N H sing N N 292 PHE N H2 sing N N 293 PHE CA C sing N N 294 PHE CA CB sing N N 295 PHE CA HA sing N N 296 PHE C O doub N N 297 PHE C OXT sing N N 298 PHE CB CG sing N N 299 PHE CB HB2 sing N N 300 PHE CB HB3 sing N N 301 PHE CG CD1 doub Y N 302 PHE CG CD2 sing Y N 303 PHE CD1 CE1 sing Y N 304 PHE CD1 HD1 sing N N 305 PHE CD2 CE2 doub Y N 306 PHE CD2 HD2 sing N N 307 PHE CE1 CZ doub Y N 308 PHE CE1 HE1 sing N N 309 PHE CE2 CZ sing Y N 310 PHE CE2 HE2 sing N N 311 PHE CZ HZ sing N N 312 PHE OXT HXT sing N N 313 PRO N CA sing N N 314 PRO N CD sing N N 315 PRO N H sing N N 316 PRO CA C sing N N 317 PRO CA CB sing N N 318 PRO CA HA sing N N 319 PRO C O doub N N 320 PRO C OXT sing N N 321 PRO CB CG sing N N 322 PRO CB HB2 sing N N 323 PRO CB HB3 sing N N 324 PRO CG CD sing N N 325 PRO CG HG2 sing N N 326 PRO CG HG3 sing N N 327 PRO CD HD2 sing N N 328 PRO CD HD3 sing N N 329 PRO OXT HXT sing N N 330 SER N CA sing N N 331 SER N H sing N N 332 SER N H2 sing N N 333 SER CA C sing N N 334 SER CA CB sing N N 335 SER CA HA sing N N 336 SER C O doub N N 337 SER C OXT sing N N 338 SER CB OG sing N N 339 SER CB HB2 sing N N 340 SER CB HB3 sing N N 341 SER OG HG sing N N 342 SER OXT HXT sing N N 343 THR N CA sing N N 344 THR N H sing N N 345 THR N H2 sing N N 346 THR CA C sing N N 347 THR CA CB sing N N 348 THR CA HA sing N N 349 THR C O doub N N 350 THR C OXT sing N N 351 THR CB OG1 sing N N 352 THR CB CG2 sing N N 353 THR CB HB sing N N 354 THR OG1 HG1 sing N N 355 THR CG2 HG21 sing N N 356 THR CG2 HG22 sing N N 357 THR CG2 HG23 sing N N 358 THR OXT HXT sing N N 359 TRP N CA sing N N 360 TRP N H sing N N 361 TRP N H2 sing N N 362 TRP CA C sing N N 363 TRP CA CB sing N N 364 TRP CA HA sing N N 365 TRP C O doub N N 366 TRP C OXT sing N N 367 TRP CB CG sing N N 368 TRP CB HB2 sing N N 369 TRP CB HB3 sing N N 370 TRP CG CD1 doub Y N 371 TRP CG CD2 sing Y N 372 TRP CD1 NE1 sing Y N 373 TRP CD1 HD1 sing N N 374 TRP CD2 CE2 doub Y N 375 TRP CD2 CE3 sing Y N 376 TRP NE1 CE2 sing Y N 377 TRP NE1 HE1 sing N N 378 TRP CE2 CZ2 sing Y N 379 TRP CE3 CZ3 doub Y N 380 TRP CE3 HE3 sing N N 381 TRP CZ2 CH2 doub Y N 382 TRP CZ2 HZ2 sing N N 383 TRP CZ3 CH2 sing Y N 384 TRP CZ3 HZ3 sing N N 385 TRP CH2 HH2 sing N N 386 TRP OXT HXT sing N N 387 TYR N CA sing N N 388 TYR N H sing N N 389 TYR N H2 sing N N 390 TYR CA C sing N N 391 TYR CA CB sing N N 392 TYR CA HA sing N N 393 TYR C O doub N N 394 TYR C OXT sing N N 395 TYR CB CG sing N N 396 TYR CB HB2 sing N N 397 TYR CB HB3 sing N N 398 TYR CG CD1 doub Y N 399 TYR CG CD2 sing Y N 400 TYR CD1 CE1 sing Y N 401 TYR CD1 HD1 sing N N 402 TYR CD2 CE2 doub Y N 403 TYR CD2 HD2 sing N N 404 TYR CE1 CZ doub Y N 405 TYR CE1 HE1 sing N N 406 TYR CE2 CZ sing Y N 407 TYR CE2 HE2 sing N N 408 TYR CZ OH sing N N 409 TYR OH HH sing N N 410 TYR OXT HXT sing N N 411 VAL N CA sing N N 412 VAL N H sing N N 413 VAL N H2 sing N N 414 VAL CA C sing N N 415 VAL CA CB sing N N 416 VAL CA HA sing N N 417 VAL C O doub N N 418 VAL C OXT sing N N 419 VAL CB CG1 sing N N 420 VAL CB CG2 sing N N 421 VAL CB HB sing N N 422 VAL CG1 HG11 sing N N 423 VAL CG1 HG12 sing N N 424 VAL CG1 HG13 sing N N 425 VAL CG2 HG21 sing N N 426 VAL CG2 HG22 sing N N 427 VAL CG2 HG23 sing N N 428 VAL OXT HXT sing N N 429 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 5-ALPHA-DIHYDROTESTOSTERONE DHT 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1D2S _pdbx_initial_refinement_model.details ? #