data_1LR7 # _entry.id 1LR7 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.362 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1LR7 pdb_00001lr7 10.2210/pdb1lr7/pdb RCSB RCSB016209 ? ? WWPDB D_1000016209 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1LR8 _pdbx_database_related.details 'structure of the fs1 domain of follistatin complexed with inositol hexasulphate' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1LR7 _pdbx_database_status.recvd_initial_deposition_date 2002-05-15 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Innis, C.A.' 1 'Hyvonen, M.' 2 # _citation.id primary _citation.title 'Crystal Structures of the Heparan Sulfate-binding Domain of Follistatin: Insights into ligand binding.' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 278 _citation.page_first 39969 _citation.page_last 39977 _citation.year 2003 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12867435 _citation.pdbx_database_id_DOI 10.1074/jbc.M211284200 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Innis, C.A.' 1 ? primary 'Hyvonen, M.' 2 ? # _cell.entry_id 1LR7 _cell.length_a 21.593 _cell.length_b 38.153 _cell.length_c 78.497 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1LR7 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man follistatin 8342.812 1 ? ? 'Heparin-binding domain' ? 2 non-polymer syn 'SULFATE ION' 96.063 5 ? ? ? ? 3 water nat water 18.015 78 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name FS1 # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code METCENVDCGPGKKCRMNKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRNECALLKARCKEQPELEVQYQGKCK _entity_poly.pdbx_seq_one_letter_code_can METCENVDCGPGKKCRMNKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRNECALLKARCKEQPELEVQYQGKCK _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLU n 1 3 THR n 1 4 CYS n 1 5 GLU n 1 6 ASN n 1 7 VAL n 1 8 ASP n 1 9 CYS n 1 10 GLY n 1 11 PRO n 1 12 GLY n 1 13 LYS n 1 14 LYS n 1 15 CYS n 1 16 ARG n 1 17 MET n 1 18 ASN n 1 19 LYS n 1 20 LYS n 1 21 ASN n 1 22 LYS n 1 23 PRO n 1 24 ARG n 1 25 CYS n 1 26 VAL n 1 27 CYS n 1 28 ALA n 1 29 PRO n 1 30 ASP n 1 31 CYS n 1 32 SER n 1 33 ASN n 1 34 ILE n 1 35 THR n 1 36 TRP n 1 37 LYS n 1 38 GLY n 1 39 PRO n 1 40 VAL n 1 41 CYS n 1 42 GLY n 1 43 LEU n 1 44 ASP n 1 45 GLY n 1 46 LYS n 1 47 THR n 1 48 TYR n 1 49 ARG n 1 50 ASN n 1 51 GLU n 1 52 CYS n 1 53 ALA n 1 54 LEU n 1 55 LEU n 1 56 LYS n 1 57 ALA n 1 58 ARG n 1 59 CYS n 1 60 LYS n 1 61 GLU n 1 62 GLN n 1 63 PRO n 1 64 GLU n 1 65 LEU n 1 66 GLU n 1 67 VAL n 1 68 GLN n 1 69 TYR n 1 70 GLN n 1 71 GLY n 1 72 LYS n 1 73 CYS n 1 74 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'Norway rat' _entity_src_gen.gene_src_genus Rattus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Rattus norvegicus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10116 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pBAT4 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code FST_RAT _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ETCENVDCGPGKKCRMNKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRNECALLKARCKEQPELEVQYQGKCK _struct_ref.pdbx_align_begin 93 _struct_ref.pdbx_db_accession P21674 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1LR7 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 74 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P21674 _struct_ref_seq.db_align_beg 93 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 165 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 64 _struct_ref_seq.pdbx_auth_seq_align_end 136 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 1LR7 _struct_ref_seq_dif.mon_id MET _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P21674 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'initiating methionine' _struct_ref_seq_dif.pdbx_auth_seq_num 63 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1LR7 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 36.49 _exptl_crystal.density_Matthews 1.83 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details '30-35% 2-propanol, 0.6-0.7 M ammonium acetate, 0.1 M Tris-HCl, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 289K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2001-02-11 _diffrn_detector.details Mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111 CHANNEL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9795 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID14-4' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID14-4 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9795 # _reflns.entry_id 1LR7 _reflns.observed_criterion_sigma_F 0.0 _reflns.observed_criterion_sigma_I 0.0 _reflns.d_resolution_high 1.50 _reflns.d_resolution_low 39.2 _reflns.number_all ? _reflns.number_obs 10456 _reflns.percent_possible_obs 95.0 _reflns.pdbx_Rmerge_I_obs 0.071 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 14.21 _reflns.pdbx_redundancy 5.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.50 _reflns_shell.d_res_low 1.53 _reflns_shell.percent_possible_all 71.8 _reflns_shell.Rmerge_I_obs 0.196 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1LR7 _refine.ls_number_reflns_obs 9913 _refine.ls_number_reflns_all 10412 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_d_res_low 39.22 _refine.ls_d_res_high 1.50 _refine.ls_percent_reflns_obs 94.87 _refine.ls_R_factor_obs 0.1905 _refine.ls_R_factor_all 0.1905 _refine.ls_R_factor_R_work 0.18892 _refine.ls_R_factor_R_free 0.22211 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 499 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.952 _refine.correlation_coeff_Fo_to_Fc_free 0.932 _refine.B_iso_mean 15.641 _refine.aniso_B[1][1] -0.77 _refine.aniso_B[2][2] 1.77 _refine.aniso_B[3][3] -1.00 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.4 _refine.pdbx_solvent_ion_probe_radii .8 _refine.pdbx_solvent_shrinkage_radii .80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model isotropic _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free .087 _refine.overall_SU_B 1.873 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML .070 _refine.pdbx_overall_ESU_R .086 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 522 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 30 _refine_hist.number_atoms_solvent 78 _refine_hist.number_atoms_total 630 _refine_hist.d_res_high 1.50 _refine_hist.d_res_low 39.22 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.020 0.021 ? 559 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 464 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.099 2.037 ? 762 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.886 3.000 ? 1084 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 4.944 3.000 ? 72 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 21.576 15.000 ? 90 'X-RAY DIFFRACTION' ? r_chiral_restr 0.118 0.200 ? 79 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.010 0.020 ? 602 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.002 0.020 ? 92 'X-RAY DIFFRACTION' ? r_nbd_refined 0.260 0.300 ? 109 'X-RAY DIFFRACTION' ? r_nbd_other 0.200 0.300 ? 436 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.241 0.500 ? 62 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other 0.239 0.500 ? 1 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.065 0.300 ? 4 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.165 0.300 ? 23 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.262 0.500 ? 12 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.289 1.500 ? 364 'X-RAY DIFFRACTION' ? r_mcangle_it 2.073 2.000 ? 577 'X-RAY DIFFRACTION' ? r_scbond_it 3.227 3.000 ? 195 'X-RAY DIFFRACTION' ? r_scangle_it 4.862 4.500 ? 185 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.500 _refine_ls_shell.d_res_low 1.539 _refine_ls_shell.number_reflns_R_work 556 _refine_ls_shell.R_factor_R_work 0.181 _refine_ls_shell.percent_reflns_obs 72.15 _refine_ls_shell.R_factor_R_free 0.271 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 19 _refine_ls_shell.number_reflns_obs 556 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _struct.entry_id 1LR7 _struct.title 'Crystal structure of Fs1, the heparin-binding domain of follistatin, complexed with the heparin analogue sucrose octasulphate (SOS)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1LR7 _struct_keywords.pdbx_keywords 'hormone/growth factor' _struct_keywords.text 'heparin-binding, cystine-rich, sucrose octasulphate, hormone-growth factor COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 30 ? ILE A 34 ? ASP A 92 ILE A 96 5 ? 5 HELX_P HELX_P2 2 ASN A 50 ? GLU A 61 ? ASN A 112 GLU A 123 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 4 SG ? ? ? 1_555 A CYS 15 SG ? ? A CYS 66 A CYS 77 1_555 ? ? ? ? ? ? ? 2.093 ? ? disulf2 disulf ? ? A CYS 9 SG ? ? ? 1_555 A CYS 25 SG ? ? A CYS 71 A CYS 87 1_555 ? ? ? ? ? ? ? 2.041 ? ? disulf3 disulf ? ? A CYS 27 SG ? ? ? 1_555 A CYS 59 SG ? ? A CYS 89 A CYS 121 1_555 ? ? ? ? ? ? ? 2.028 ? ? disulf4 disulf ? ? A CYS 31 SG ? ? ? 1_555 A CYS 52 SG ? ? A CYS 93 A CYS 114 1_555 ? ? ? ? ? ? ? 2.091 ? ? disulf5 disulf ? ? A CYS 41 SG ? ? ? 1_555 A CYS 73 SG ? ? A CYS 103 A CYS 135 1_555 ? ? ? ? ? ? ? 2.040 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 13 ? MET A 17 ? LYS A 75 MET A 79 A 2 PRO A 23 ? CYS A 27 ? PRO A 85 CYS A 89 B 1 THR A 47 ? TYR A 48 ? THR A 109 TYR A 110 B 2 VAL A 40 ? GLY A 42 ? VAL A 102 GLY A 104 B 3 VAL A 67 ? GLN A 70 ? VAL A 129 GLN A 132 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LYS A 14 ? N LYS A 76 O VAL A 26 ? O VAL A 88 B 1 2 O TYR A 48 ? O TYR A 110 N VAL A 40 ? N VAL A 102 B 2 3 N CYS A 41 ? N CYS A 103 O GLN A 68 ? O GLN A 130 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SO4 1002 ? 3 'BINDING SITE FOR RESIDUE SO4 A 1002' AC2 Software A SO4 1001 ? 4 'BINDING SITE FOR RESIDUE SO4 A 1001' AC3 Software A SO4 1003 ? 2 'BINDING SITE FOR RESIDUE SO4 A 1003' AC4 Software A SO4 1004 ? 2 'BINDING SITE FOR RESIDUE SO4 A 1004' AC5 Software A SO4 1005 ? 6 'BINDING SITE FOR RESIDUE SO4 A 1005' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 ASN A 18 ? ASN A 80 . ? 1_555 ? 2 AC1 3 LYS A 20 ? LYS A 82 . ? 1_555 ? 3 AC1 3 HOH G . ? HOH A 1068 . ? 1_555 ? 4 AC2 4 ASN A 18 ? ASN A 80 . ? 1_555 ? 5 AC2 4 ARG A 24 ? ARG A 86 . ? 1_555 ? 6 AC2 4 VAL A 26 ? VAL A 88 . ? 1_555 ? 7 AC2 4 SO4 F . ? SO4 A 1005 . ? 1_555 ? 8 AC3 2 SO4 F . ? SO4 A 1005 . ? 1_555 ? 9 AC3 2 HOH G . ? HOH A 1073 . ? 1_555 ? 10 AC4 2 ARG A 24 ? ARG A 86 . ? 1_555 ? 11 AC4 2 HOH G . ? HOH A 1028 . ? 1_555 ? 12 AC5 6 ASN A 18 ? ASN A 80 . ? 1_555 ? 13 AC5 6 LYS A 19 ? LYS A 81 . ? 1_555 ? 14 AC5 6 PRO A 63 ? PRO A 125 . ? 1_655 ? 15 AC5 6 SO4 C . ? SO4 A 1001 . ? 1_555 ? 16 AC5 6 SO4 D . ? SO4 A 1003 . ? 1_555 ? 17 AC5 6 HOH G . ? HOH A 1067 . ? 1_555 ? # _database_PDB_matrix.entry_id 1LR7 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1LR7 _atom_sites.fract_transf_matrix[1][1] 0.046311 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.026210 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012739 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 63 ? ? ? A . n A 1 2 GLU 2 64 64 GLU GLU A . n A 1 3 THR 3 65 65 THR THR A . n A 1 4 CYS 4 66 66 CYS CYS A . n A 1 5 GLU 5 67 67 GLU GLU A . n A 1 6 ASN 6 68 68 ASN ASN A . n A 1 7 VAL 7 69 69 VAL VAL A . n A 1 8 ASP 8 70 70 ASP ASP A . n A 1 9 CYS 9 71 71 CYS CYS A . n A 1 10 GLY 10 72 72 GLY GLY A . n A 1 11 PRO 11 73 73 PRO PRO A . n A 1 12 GLY 12 74 74 GLY GLY A . n A 1 13 LYS 13 75 75 LYS LYS A . n A 1 14 LYS 14 76 76 LYS LYS A . n A 1 15 CYS 15 77 77 CYS CYS A . n A 1 16 ARG 16 78 78 ARG ARG A . n A 1 17 MET 17 79 79 MET MET A . n A 1 18 ASN 18 80 80 ASN ASN A . n A 1 19 LYS 19 81 81 LYS LYS A . n A 1 20 LYS 20 82 82 LYS LYS A . n A 1 21 ASN 21 83 83 ASN ASN A . n A 1 22 LYS 22 84 84 LYS LYS A . n A 1 23 PRO 23 85 85 PRO PRO A . n A 1 24 ARG 24 86 86 ARG ARG A . n A 1 25 CYS 25 87 87 CYS CYS A . n A 1 26 VAL 26 88 88 VAL VAL A . n A 1 27 CYS 27 89 89 CYS CYS A . n A 1 28 ALA 28 90 90 ALA ALA A . n A 1 29 PRO 29 91 91 PRO PRO A . n A 1 30 ASP 30 92 92 ASP ASP A . n A 1 31 CYS 31 93 93 CYS CYS A . n A 1 32 SER 32 94 94 SER SER A . n A 1 33 ASN 33 95 95 ASN ASN A . n A 1 34 ILE 34 96 96 ILE ILE A . n A 1 35 THR 35 97 97 THR THR A . n A 1 36 TRP 36 98 98 TRP TRP A . n A 1 37 LYS 37 99 99 LYS LYS A . n A 1 38 GLY 38 100 100 GLY GLY A . n A 1 39 PRO 39 101 101 PRO PRO A . n A 1 40 VAL 40 102 102 VAL VAL A . n A 1 41 CYS 41 103 103 CYS CYS A . n A 1 42 GLY 42 104 104 GLY GLY A . n A 1 43 LEU 43 105 105 LEU LEU A . n A 1 44 ASP 44 106 106 ASP ASP A . n A 1 45 GLY 45 107 107 GLY GLY A . n A 1 46 LYS 46 108 108 LYS LYS A . n A 1 47 THR 47 109 109 THR THR A . n A 1 48 TYR 48 110 110 TYR TYR A . n A 1 49 ARG 49 111 111 ARG ARG A . n A 1 50 ASN 50 112 112 ASN ASN A . n A 1 51 GLU 51 113 113 GLU GLU A . n A 1 52 CYS 52 114 114 CYS CYS A . n A 1 53 ALA 53 115 115 ALA ALA A . n A 1 54 LEU 54 116 116 LEU LEU A . n A 1 55 LEU 55 117 117 LEU LEU A . n A 1 56 LYS 56 118 118 LYS LYS A . n A 1 57 ALA 57 119 119 ALA ALA A . n A 1 58 ARG 58 120 120 ARG ARG A . n A 1 59 CYS 59 121 121 CYS CYS A . n A 1 60 LYS 60 122 122 LYS LYS A . n A 1 61 GLU 61 123 123 GLU GLU A . n A 1 62 GLN 62 124 124 GLN GLN A . n A 1 63 PRO 63 125 125 PRO PRO A . n A 1 64 GLU 64 126 126 GLU GLU A . n A 1 65 LEU 65 127 127 LEU LEU A . n A 1 66 GLU 66 128 128 GLU GLU A . n A 1 67 VAL 67 129 129 VAL VAL A . n A 1 68 GLN 68 130 130 GLN GLN A . n A 1 69 TYR 69 131 131 TYR TYR A . n A 1 70 GLN 70 132 132 GLN GLN A . n A 1 71 GLY 71 133 133 GLY GLY A . n A 1 72 LYS 72 134 134 LYS LYS A . n A 1 73 CYS 73 135 135 CYS CYS A . n A 1 74 LYS 74 136 136 LYS LYS A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 1002 1 SO4 SO4 A . C 2 SO4 1 1001 2 SO4 SO4 A . D 2 SO4 1 1003 3 SO4 SO4 A . E 2 SO4 1 1004 4 SO4 SO4 A . F 2 SO4 1 1005 5 SO4 SO4 A . G 3 HOH 1 1006 1 HOH HOH A . G 3 HOH 2 1007 2 HOH HOH A . G 3 HOH 3 1008 3 HOH HOH A . G 3 HOH 4 1009 4 HOH HOH A . G 3 HOH 5 1010 5 HOH HOH A . G 3 HOH 6 1011 6 HOH HOH A . G 3 HOH 7 1012 7 HOH HOH A . G 3 HOH 8 1013 8 HOH HOH A . G 3 HOH 9 1014 9 HOH HOH A . G 3 HOH 10 1015 10 HOH HOH A . G 3 HOH 11 1016 11 HOH HOH A . G 3 HOH 12 1017 12 HOH HOH A . G 3 HOH 13 1018 13 HOH HOH A . G 3 HOH 14 1019 14 HOH HOH A . G 3 HOH 15 1020 15 HOH HOH A . G 3 HOH 16 1021 16 HOH HOH A . G 3 HOH 17 1022 17 HOH HOH A . G 3 HOH 18 1023 18 HOH HOH A . G 3 HOH 19 1024 19 HOH HOH A . G 3 HOH 20 1025 20 HOH HOH A . G 3 HOH 21 1026 21 HOH HOH A . G 3 HOH 22 1027 22 HOH HOH A . G 3 HOH 23 1028 23 HOH HOH A . G 3 HOH 24 1029 24 HOH HOH A . G 3 HOH 25 1030 25 HOH HOH A . G 3 HOH 26 1031 26 HOH HOH A . G 3 HOH 27 1032 27 HOH HOH A . G 3 HOH 28 1033 28 HOH HOH A . G 3 HOH 29 1034 29 HOH HOH A . G 3 HOH 30 1035 30 HOH HOH A . G 3 HOH 31 1036 31 HOH HOH A . G 3 HOH 32 1037 32 HOH HOH A . G 3 HOH 33 1038 33 HOH HOH A . G 3 HOH 34 1039 34 HOH HOH A . G 3 HOH 35 1040 35 HOH HOH A . G 3 HOH 36 1041 36 HOH HOH A . G 3 HOH 37 1042 37 HOH HOH A . G 3 HOH 38 1043 38 HOH HOH A . G 3 HOH 39 1044 39 HOH HOH A . G 3 HOH 40 1045 40 HOH HOH A . G 3 HOH 41 1046 41 HOH HOH A . G 3 HOH 42 1047 42 HOH HOH A . G 3 HOH 43 1048 43 HOH HOH A . G 3 HOH 44 1049 44 HOH HOH A . G 3 HOH 45 1050 45 HOH HOH A . G 3 HOH 46 1051 46 HOH HOH A . G 3 HOH 47 1052 47 HOH HOH A . G 3 HOH 48 1053 48 HOH HOH A . G 3 HOH 49 1054 49 HOH HOH A . G 3 HOH 50 1055 50 HOH HOH A . G 3 HOH 51 1056 51 HOH HOH A . G 3 HOH 52 1057 52 HOH HOH A . G 3 HOH 53 1058 53 HOH HOH A . G 3 HOH 54 1059 54 HOH HOH A . G 3 HOH 55 1060 55 HOH HOH A . G 3 HOH 56 1061 56 HOH HOH A . G 3 HOH 57 1062 57 HOH HOH A . G 3 HOH 58 1063 58 HOH HOH A . G 3 HOH 59 1064 59 HOH HOH A . G 3 HOH 60 1065 60 HOH HOH A . G 3 HOH 61 1066 61 HOH HOH A . G 3 HOH 62 1067 62 HOH HOH A . G 3 HOH 63 1068 63 HOH HOH A . G 3 HOH 64 1069 64 HOH HOH A . G 3 HOH 65 1070 65 HOH HOH A . G 3 HOH 66 1071 66 HOH HOH A . G 3 HOH 67 1072 67 HOH HOH A . G 3 HOH 68 1073 68 HOH HOH A . G 3 HOH 69 1074 69 HOH HOH A . G 3 HOH 70 1075 70 HOH HOH A . G 3 HOH 71 1076 71 HOH HOH A . G 3 HOH 72 1077 72 HOH HOH A . G 3 HOH 73 1078 73 HOH HOH A . G 3 HOH 74 1079 74 HOH HOH A . G 3 HOH 75 1080 75 HOH HOH A . G 3 HOH 76 1081 76 HOH HOH A . G 3 HOH 77 1082 77 HOH HOH A . G 3 HOH 78 1083 78 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2003-07-29 2 'Structure model' 1 1 2008-04-28 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-12-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' struct_ref_seq_dif 3 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_ref_seq_dif.details' 4 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 SHARP phasing . ? 3 REFMAC refinement 5.0 ? 4 # _pdbx_database_remark.id 600 _pdbx_database_remark.text ; heterogen Authors claimed that there was a lack of connecting electron density between sulphate groups in the ligand sucrose octasulphate due to possible alternative binding modes. Accordingly, the authors chose to list the sulphate ions as free ions even though they belong to the sucrose octasulphate molecule. ; # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A VAL 69 ? ? O A HOH 1054 ? ? 1.72 2 1 CG A GLU 128 ? ? O A HOH 1076 ? ? 2.05 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 1061 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 1075 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 3_1055 _pdbx_validate_symm_contact.dist 2.05 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CB _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ASP _pdbx_validate_rmsd_angle.auth_seq_id_1 92 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CG _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ASP _pdbx_validate_rmsd_angle.auth_seq_id_2 92 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 OD1 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ASP _pdbx_validate_rmsd_angle.auth_seq_id_3 92 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 124.62 _pdbx_validate_rmsd_angle.angle_target_value 118.30 _pdbx_validate_rmsd_angle.angle_deviation 6.32 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.90 _pdbx_validate_rmsd_angle.linker_flag N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ALA _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 90 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -152.26 _pdbx_validate_torsion.psi 70.89 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 64 ? CG ? A GLU 2 CG 2 1 Y 1 A GLU 64 ? CD ? A GLU 2 CD 3 1 Y 1 A GLU 64 ? OE1 ? A GLU 2 OE1 4 1 Y 1 A GLU 64 ? OE2 ? A GLU 2 OE2 5 1 Y 1 A GLU 67 ? CG ? A GLU 5 CG 6 1 Y 1 A GLU 67 ? CD ? A GLU 5 CD 7 1 Y 1 A GLU 67 ? OE1 ? A GLU 5 OE1 8 1 Y 1 A GLU 67 ? OE2 ? A GLU 5 OE2 9 1 Y 1 A ASN 68 ? CG ? A ASN 6 CG 10 1 Y 1 A ASN 68 ? OD1 ? A ASN 6 OD1 11 1 Y 1 A ASN 68 ? ND2 ? A ASN 6 ND2 12 1 Y 1 A LYS 76 ? CG ? A LYS 14 CG 13 1 Y 1 A LYS 76 ? CD ? A LYS 14 CD 14 1 Y 1 A LYS 76 ? CE ? A LYS 14 CE 15 1 Y 1 A LYS 76 ? NZ ? A LYS 14 NZ 16 1 Y 1 A ARG 78 ? CG ? A ARG 16 CG 17 1 Y 1 A ARG 78 ? CD ? A ARG 16 CD 18 1 Y 1 A ARG 78 ? NE ? A ARG 16 NE 19 1 Y 1 A ARG 78 ? CZ ? A ARG 16 CZ 20 1 Y 1 A ARG 78 ? NH1 ? A ARG 16 NH1 21 1 Y 1 A ARG 78 ? NH2 ? A ARG 16 NH2 22 1 Y 1 A LYS 81 ? CG ? A LYS 19 CG 23 1 Y 1 A LYS 81 ? CD ? A LYS 19 CD 24 1 Y 1 A LYS 81 ? CE ? A LYS 19 CE 25 1 Y 1 A LYS 81 ? NZ ? A LYS 19 NZ 26 1 Y 1 A LYS 82 ? CD ? A LYS 20 CD 27 1 Y 1 A LYS 82 ? CE ? A LYS 20 CE 28 1 Y 1 A LYS 82 ? NZ ? A LYS 20 NZ 29 1 Y 1 A LYS 84 ? CD ? A LYS 22 CD 30 1 Y 1 A LYS 84 ? CE ? A LYS 22 CE 31 1 Y 1 A LYS 84 ? NZ ? A LYS 22 NZ 32 1 Y 1 A LYS 108 ? CE ? A LYS 46 CE 33 1 Y 1 A LYS 108 ? NZ ? A LYS 46 NZ 34 1 Y 1 A LYS 122 ? CE ? A LYS 60 CE 35 1 Y 1 A LYS 122 ? NZ ? A LYS 60 NZ 36 1 Y 1 A GLU 123 ? CG ? A GLU 61 CG 37 1 Y 1 A GLU 123 ? CD ? A GLU 61 CD 38 1 Y 1 A GLU 123 ? OE1 ? A GLU 61 OE1 39 1 Y 1 A GLU 123 ? OE2 ? A GLU 61 OE2 40 1 Y 1 A GLU 128 ? CD ? A GLU 66 CD 41 1 Y 1 A GLU 128 ? OE1 ? A GLU 66 OE1 42 1 Y 1 A GLU 128 ? OE2 ? A GLU 66 OE2 # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id MET _pdbx_unobs_or_zero_occ_residues.auth_seq_id 63 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id MET _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 water HOH #