data_1M3H # _entry.id 1M3H # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.386 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1M3H pdb_00001m3h 10.2210/pdb1m3h/pdb NDB PD0331 ? ? RCSB RCSB016550 ? ? WWPDB D_1000016550 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-04-20 2 'Structure model' 1 1 2008-04-28 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2021-10-27 5 'Structure model' 1 4 2024-02-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' struct_conn 3 4 'Structure model' struct_ref_seq_dif 4 4 'Structure model' struct_site 5 5 'Structure model' chem_comp_atom 6 5 'Structure model' chem_comp_bond 7 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 4 'Structure model' '_struct_ref_seq_dif.details' 5 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1M3H _pdbx_database_status.recvd_initial_deposition_date 2002-06-27 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1EBM '1ebm is the Crystal Structure Of The Human 8-Oxoguanine Glycosylase (Hogg1) Bound To A Substrate Oligonucleotide' unspecified PDB 1M3Q '1M3Q IS The end product complex of hogg1 d268e mutant with phosphoester bond restored by 8-aminoguanine' unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Chung, S.J.' 1 'Verdine, G.L.' 2 # _citation.id primary _citation.title 'Structures of End Products Resulting from Lesion Processing by a DNA Glycosylase/Lyase' _citation.journal_abbrev Chem.Biol. _citation.journal_volume 11 _citation.page_first 1643 _citation.page_last 1649 _citation.year 2004 _citation.journal_id_ASTM CBOLE2 _citation.country UK _citation.journal_id_ISSN 1074-5521 _citation.journal_id_CSD 2050 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15610848 _citation.pdbx_database_id_DOI 10.1016/j.chembiol.2004.09.014 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Chung, S.J.' 1 ? primary 'Verdine, G.L.' 2 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(P*GP*GP*TP*AP*GP*AP*CP*CP*TP*GP*GP*AP*CP*GP*C)-3'" 4635.010 1 ? ? ? ? 2 polymer syn "5'-D(P*GP*CP*GP*TP*CP*CP*AP*(DDX))-3'" 2276.479 1 ? ? ? ? 3 polymer syn "5'-D(P*GP*TP*CP*TP*AP*CP*C)-3'" 2073.386 1 ? ? ? ? 4 polymer man '8-Oxoguanine DNA Glycosylase' 35662.332 1 3.2.2.- D268E 'core fragment (residues 12-325)' ? 5 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? 6 water nat water 18.015 92 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DG)(DG)(DT)(DA)(DG)(DA)(DC)(DC)(DT)(DG)(DG)(DA)(DC)(DG)(DC)' GGTAGACCTGGACGC B ? 2 polydeoxyribonucleotide no yes '(DG)(DC)(DG)(DT)(DC)(DC)(DA)(DDX)' GCGTCCAN C ? 3 polydeoxyribonucleotide no no '(DG)(DT)(DC)(DT)(DA)(DC)(DC)' GTCTACC D ? 4 'polypeptide(L)' no no ;GSEGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLADQVWTLTQTEEQLHCTVYRGDKSQASRP TPDELEAVRKYFQLDVTLAQLYHHWGSVDSHFQEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGP RLIQLDDVTYHGFPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKALCILPGVGT KVADCICLMALDKPQAVPVEVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELGNFFRSLWGPYAGWAQAVLFSADLRQ ; ;GSEGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLADQVWTLTQTEEQLHCTVYRGDKSQASRP TPDELEAVRKYFQLDVTLAQLYHHWGSVDSHFQEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGP RLIQLDDVTYHGFPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKALCILPGVGT KVADCICLMALDKPQAVPVEVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELGNFFRSLWGPYAGWAQAVLFSADLRQ ; A ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 'CALCIUM ION' CA 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DG n 1 3 DT n 1 4 DA n 1 5 DG n 1 6 DA n 1 7 DC n 1 8 DC n 1 9 DT n 1 10 DG n 1 11 DG n 1 12 DA n 1 13 DC n 1 14 DG n 1 15 DC n 2 1 DG n 2 2 DC n 2 3 DG n 2 4 DT n 2 5 DC n 2 6 DC n 2 7 DA n 2 8 DDX n 3 1 DG n 3 2 DT n 3 3 DC n 3 4 DT n 3 5 DA n 3 6 DC n 3 7 DC n 4 1 GLY n 4 2 SER n 4 3 GLU n 4 4 GLY n 4 5 HIS n 4 6 ARG n 4 7 THR n 4 8 LEU n 4 9 ALA n 4 10 SER n 4 11 THR n 4 12 PRO n 4 13 ALA n 4 14 LEU n 4 15 TRP n 4 16 ALA n 4 17 SER n 4 18 ILE n 4 19 PRO n 4 20 CYS n 4 21 PRO n 4 22 ARG n 4 23 SER n 4 24 GLU n 4 25 LEU n 4 26 ARG n 4 27 LEU n 4 28 ASP n 4 29 LEU n 4 30 VAL n 4 31 LEU n 4 32 PRO n 4 33 SER n 4 34 GLY n 4 35 GLN n 4 36 SER n 4 37 PHE n 4 38 ARG n 4 39 TRP n 4 40 ARG n 4 41 GLU n 4 42 GLN n 4 43 SER n 4 44 PRO n 4 45 ALA n 4 46 HIS n 4 47 TRP n 4 48 SER n 4 49 GLY n 4 50 VAL n 4 51 LEU n 4 52 ALA n 4 53 ASP n 4 54 GLN n 4 55 VAL n 4 56 TRP n 4 57 THR n 4 58 LEU n 4 59 THR n 4 60 GLN n 4 61 THR n 4 62 GLU n 4 63 GLU n 4 64 GLN n 4 65 LEU n 4 66 HIS n 4 67 CYS n 4 68 THR n 4 69 VAL n 4 70 TYR n 4 71 ARG n 4 72 GLY n 4 73 ASP n 4 74 LYS n 4 75 SER n 4 76 GLN n 4 77 ALA n 4 78 SER n 4 79 ARG n 4 80 PRO n 4 81 THR n 4 82 PRO n 4 83 ASP n 4 84 GLU n 4 85 LEU n 4 86 GLU n 4 87 ALA n 4 88 VAL n 4 89 ARG n 4 90 LYS n 4 91 TYR n 4 92 PHE n 4 93 GLN n 4 94 LEU n 4 95 ASP n 4 96 VAL n 4 97 THR n 4 98 LEU n 4 99 ALA n 4 100 GLN n 4 101 LEU n 4 102 TYR n 4 103 HIS n 4 104 HIS n 4 105 TRP n 4 106 GLY n 4 107 SER n 4 108 VAL n 4 109 ASP n 4 110 SER n 4 111 HIS n 4 112 PHE n 4 113 GLN n 4 114 GLU n 4 115 VAL n 4 116 ALA n 4 117 GLN n 4 118 LYS n 4 119 PHE n 4 120 GLN n 4 121 GLY n 4 122 VAL n 4 123 ARG n 4 124 LEU n 4 125 LEU n 4 126 ARG n 4 127 GLN n 4 128 ASP n 4 129 PRO n 4 130 ILE n 4 131 GLU n 4 132 CYS n 4 133 LEU n 4 134 PHE n 4 135 SER n 4 136 PHE n 4 137 ILE n 4 138 CYS n 4 139 SER n 4 140 SER n 4 141 ASN n 4 142 ASN n 4 143 ASN n 4 144 ILE n 4 145 ALA n 4 146 ARG n 4 147 ILE n 4 148 THR n 4 149 GLY n 4 150 MET n 4 151 VAL n 4 152 GLU n 4 153 ARG n 4 154 LEU n 4 155 CYS n 4 156 GLN n 4 157 ALA n 4 158 PHE n 4 159 GLY n 4 160 PRO n 4 161 ARG n 4 162 LEU n 4 163 ILE n 4 164 GLN n 4 165 LEU n 4 166 ASP n 4 167 ASP n 4 168 VAL n 4 169 THR n 4 170 TYR n 4 171 HIS n 4 172 GLY n 4 173 PHE n 4 174 PRO n 4 175 SER n 4 176 LEU n 4 177 GLN n 4 178 ALA n 4 179 LEU n 4 180 ALA n 4 181 GLY n 4 182 PRO n 4 183 GLU n 4 184 VAL n 4 185 GLU n 4 186 ALA n 4 187 HIS n 4 188 LEU n 4 189 ARG n 4 190 LYS n 4 191 LEU n 4 192 GLY n 4 193 LEU n 4 194 GLY n 4 195 TYR n 4 196 ARG n 4 197 ALA n 4 198 ARG n 4 199 TYR n 4 200 VAL n 4 201 SER n 4 202 ALA n 4 203 SER n 4 204 ALA n 4 205 ARG n 4 206 ALA n 4 207 ILE n 4 208 LEU n 4 209 GLU n 4 210 GLU n 4 211 GLN n 4 212 GLY n 4 213 GLY n 4 214 LEU n 4 215 ALA n 4 216 TRP n 4 217 LEU n 4 218 GLN n 4 219 GLN n 4 220 LEU n 4 221 ARG n 4 222 GLU n 4 223 SER n 4 224 SER n 4 225 TYR n 4 226 GLU n 4 227 GLU n 4 228 ALA n 4 229 HIS n 4 230 LYS n 4 231 ALA n 4 232 LEU n 4 233 CYS n 4 234 ILE n 4 235 LEU n 4 236 PRO n 4 237 GLY n 4 238 VAL n 4 239 GLY n 4 240 THR n 4 241 LYS n 4 242 VAL n 4 243 ALA n 4 244 ASP n 4 245 CYS n 4 246 ILE n 4 247 CYS n 4 248 LEU n 4 249 MET n 4 250 ALA n 4 251 LEU n 4 252 ASP n 4 253 LYS n 4 254 PRO n 4 255 GLN n 4 256 ALA n 4 257 VAL n 4 258 PRO n 4 259 VAL n 4 260 GLU n 4 261 VAL n 4 262 HIS n 4 263 MET n 4 264 TRP n 4 265 HIS n 4 266 ILE n 4 267 ALA n 4 268 GLN n 4 269 ARG n 4 270 ASP n 4 271 TYR n 4 272 SER n 4 273 TRP n 4 274 HIS n 4 275 PRO n 4 276 THR n 4 277 THR n 4 278 SER n 4 279 GLN n 4 280 ALA n 4 281 LYS n 4 282 GLY n 4 283 PRO n 4 284 SER n 4 285 PRO n 4 286 GLN n 4 287 THR n 4 288 ASN n 4 289 LYS n 4 290 GLU n 4 291 LEU n 4 292 GLY n 4 293 ASN n 4 294 PHE n 4 295 PHE n 4 296 ARG n 4 297 SER n 4 298 LEU n 4 299 TRP n 4 300 GLY n 4 301 PRO n 4 302 TYR n 4 303 ALA n 4 304 GLY n 4 305 TRP n 4 306 ALA n 4 307 GLN n 4 308 ALA n 4 309 VAL n 4 310 LEU n 4 311 PHE n 4 312 SER n 4 313 ALA n 4 314 ASP n 4 315 LEU n 4 316 ARG n 4 317 GLN n # _entity_src_gen.entity_id 4 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene ogg1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DDX 'DNA linking' . "2',3'-DEHYDRO-2',3'-DIDEOXYRIBOFURANOSE-5'-PHOSPHATE" ? 'C5 H9 O6 P' 196.095 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG G B . n A 1 2 DG 2 2 2 DG G B . n A 1 3 DT 3 3 3 DT T B . n A 1 4 DA 4 4 4 DA A B . n A 1 5 DG 5 5 5 DG G B . n A 1 6 DA 6 6 6 DA A B . n A 1 7 DC 7 7 7 DC C B . n A 1 8 DC 8 8 8 DC C B . n A 1 9 DT 9 9 9 DT T B . n A 1 10 DG 10 10 10 DG G B . n A 1 11 DG 11 11 11 DG G B . n A 1 12 DA 12 12 12 DA A B . n A 1 13 DC 13 13 13 DC C B . n A 1 14 DG 14 14 14 DG G B . n A 1 15 DC 15 15 15 DC C B . n B 2 1 DG 1 16 16 DG G C . n B 2 2 DC 2 17 17 DC C C . n B 2 3 DG 3 18 18 DG G C . n B 2 4 DT 4 19 19 DT T C . n B 2 5 DC 5 20 20 DC C C . n B 2 6 DC 6 21 21 DC C C . n B 2 7 DA 7 22 22 DA A C . n B 2 8 DDX 8 23 23 DDX DDX C . n C 3 1 DG 1 24 24 DG G D . n C 3 2 DT 2 25 25 DT T D . n C 3 3 DC 3 26 26 DC C D . n C 3 4 DT 4 27 27 DT T D . n C 3 5 DA 5 28 28 DA A D . n C 3 6 DC 6 29 29 DC C D . n C 3 7 DC 7 30 30 DC C D . n D 4 1 GLY 1 9 9 GLY GLY A . n D 4 2 SER 2 10 10 SER SER A . n D 4 3 GLU 3 11 11 GLU GLU A . n D 4 4 GLY 4 12 12 GLY GLY A . n D 4 5 HIS 5 13 13 HIS HIS A . n D 4 6 ARG 6 14 14 ARG ARG A . n D 4 7 THR 7 15 15 THR THR A . n D 4 8 LEU 8 16 16 LEU LEU A . n D 4 9 ALA 9 17 17 ALA ALA A . n D 4 10 SER 10 18 18 SER SER A . n D 4 11 THR 11 19 19 THR THR A . n D 4 12 PRO 12 20 20 PRO PRO A . n D 4 13 ALA 13 21 21 ALA ALA A . n D 4 14 LEU 14 22 22 LEU LEU A . n D 4 15 TRP 15 23 23 TRP TRP A . n D 4 16 ALA 16 24 24 ALA ALA A . n D 4 17 SER 17 25 25 SER SER A . n D 4 18 ILE 18 26 26 ILE ILE A . n D 4 19 PRO 19 27 27 PRO PRO A . n D 4 20 CYS 20 28 28 CYS CYS A . n D 4 21 PRO 21 29 29 PRO PRO A . n D 4 22 ARG 22 30 30 ARG ARG A . n D 4 23 SER 23 31 31 SER SER A . n D 4 24 GLU 24 32 32 GLU GLU A . n D 4 25 LEU 25 33 33 LEU LEU A . n D 4 26 ARG 26 34 34 ARG ARG A . n D 4 27 LEU 27 35 35 LEU LEU A . n D 4 28 ASP 28 36 36 ASP ASP A . n D 4 29 LEU 29 37 37 LEU LEU A . n D 4 30 VAL 30 38 38 VAL VAL A . n D 4 31 LEU 31 39 39 LEU LEU A . n D 4 32 PRO 32 40 40 PRO PRO A . n D 4 33 SER 33 41 41 SER SER A . n D 4 34 GLY 34 42 42 GLY GLY A . n D 4 35 GLN 35 43 43 GLN GLN A . n D 4 36 SER 36 44 44 SER SER A . n D 4 37 PHE 37 45 45 PHE PHE A . n D 4 38 ARG 38 46 46 ARG ARG A . n D 4 39 TRP 39 47 47 TRP TRP A . n D 4 40 ARG 40 48 48 ARG ARG A . n D 4 41 GLU 41 49 49 GLU GLU A . n D 4 42 GLN 42 50 50 GLN GLN A . n D 4 43 SER 43 51 51 SER SER A . n D 4 44 PRO 44 52 52 PRO PRO A . n D 4 45 ALA 45 53 53 ALA ALA A . n D 4 46 HIS 46 54 54 HIS HIS A . n D 4 47 TRP 47 55 55 TRP TRP A . n D 4 48 SER 48 56 56 SER SER A . n D 4 49 GLY 49 57 57 GLY GLY A . n D 4 50 VAL 50 58 58 VAL VAL A . n D 4 51 LEU 51 59 59 LEU LEU A . n D 4 52 ALA 52 60 60 ALA ALA A . n D 4 53 ASP 53 61 61 ASP ASP A . n D 4 54 GLN 54 62 62 GLN GLN A . n D 4 55 VAL 55 63 63 VAL VAL A . n D 4 56 TRP 56 64 64 TRP TRP A . n D 4 57 THR 57 65 65 THR THR A . n D 4 58 LEU 58 66 66 LEU LEU A . n D 4 59 THR 59 67 67 THR THR A . n D 4 60 GLN 60 68 68 GLN GLN A . n D 4 61 THR 61 69 69 THR THR A . n D 4 62 GLU 62 70 70 GLU GLU A . n D 4 63 GLU 63 71 71 GLU GLU A . n D 4 64 GLN 64 72 72 GLN GLN A . n D 4 65 LEU 65 73 73 LEU LEU A . n D 4 66 HIS 66 74 74 HIS HIS A . n D 4 67 CYS 67 75 75 CYS CYS A . n D 4 68 THR 68 76 76 THR THR A . n D 4 69 VAL 69 77 77 VAL VAL A . n D 4 70 TYR 70 78 78 TYR TYR A . n D 4 71 ARG 71 79 79 ARG ARG A . n D 4 72 GLY 72 80 ? ? ? A . n D 4 73 ASP 73 81 ? ? ? A . n D 4 74 LYS 74 82 ? ? ? A . n D 4 75 SER 75 83 83 SER SER A . n D 4 76 GLN 76 84 84 GLN GLN A . n D 4 77 ALA 77 85 85 ALA ALA A . n D 4 78 SER 78 86 86 SER SER A . n D 4 79 ARG 79 87 87 ARG ARG A . n D 4 80 PRO 80 88 88 PRO PRO A . n D 4 81 THR 81 89 89 THR THR A . n D 4 82 PRO 82 90 90 PRO PRO A . n D 4 83 ASP 83 91 91 ASP ASP A . n D 4 84 GLU 84 92 92 GLU GLU A . n D 4 85 LEU 85 93 93 LEU LEU A . n D 4 86 GLU 86 94 94 GLU GLU A . n D 4 87 ALA 87 95 95 ALA ALA A . n D 4 88 VAL 88 96 96 VAL VAL A . n D 4 89 ARG 89 97 97 ARG ARG A . n D 4 90 LYS 90 98 98 LYS LYS A . n D 4 91 TYR 91 99 99 TYR TYR A . n D 4 92 PHE 92 100 100 PHE PHE A . n D 4 93 GLN 93 101 101 GLN GLN A . n D 4 94 LEU 94 102 102 LEU LEU A . n D 4 95 ASP 95 103 103 ASP ASP A . n D 4 96 VAL 96 104 104 VAL VAL A . n D 4 97 THR 97 105 105 THR THR A . n D 4 98 LEU 98 106 106 LEU LEU A . n D 4 99 ALA 99 107 107 ALA ALA A . n D 4 100 GLN 100 108 108 GLN GLN A . n D 4 101 LEU 101 109 109 LEU LEU A . n D 4 102 TYR 102 110 110 TYR TYR A . n D 4 103 HIS 103 111 111 HIS HIS A . n D 4 104 HIS 104 112 112 HIS HIS A . n D 4 105 TRP 105 113 113 TRP TRP A . n D 4 106 GLY 106 114 114 GLY GLY A . n D 4 107 SER 107 115 115 SER SER A . n D 4 108 VAL 108 116 116 VAL VAL A . n D 4 109 ASP 109 117 117 ASP ASP A . n D 4 110 SER 110 118 118 SER SER A . n D 4 111 HIS 111 119 119 HIS HIS A . n D 4 112 PHE 112 120 120 PHE PHE A . n D 4 113 GLN 113 121 121 GLN GLN A . n D 4 114 GLU 114 122 122 GLU GLU A . n D 4 115 VAL 115 123 123 VAL VAL A . n D 4 116 ALA 116 124 124 ALA ALA A . n D 4 117 GLN 117 125 125 GLN GLN A . n D 4 118 LYS 118 126 126 LYS LYS A . n D 4 119 PHE 119 127 127 PHE PHE A . n D 4 120 GLN 120 128 128 GLN GLN A . n D 4 121 GLY 121 129 129 GLY GLY A . n D 4 122 VAL 122 130 130 VAL VAL A . n D 4 123 ARG 123 131 131 ARG ARG A . n D 4 124 LEU 124 132 132 LEU LEU A . n D 4 125 LEU 125 133 133 LEU LEU A . n D 4 126 ARG 126 134 134 ARG ARG A . n D 4 127 GLN 127 135 135 GLN GLN A . n D 4 128 ASP 128 136 136 ASP ASP A . n D 4 129 PRO 129 137 137 PRO PRO A . n D 4 130 ILE 130 138 138 ILE ILE A . n D 4 131 GLU 131 139 139 GLU GLU A . n D 4 132 CYS 132 140 140 CYS CYS A . n D 4 133 LEU 133 141 141 LEU LEU A . n D 4 134 PHE 134 142 142 PHE PHE A . n D 4 135 SER 135 143 143 SER SER A . n D 4 136 PHE 136 144 144 PHE PHE A . n D 4 137 ILE 137 145 145 ILE ILE A . n D 4 138 CYS 138 146 146 CYS CYS A . n D 4 139 SER 139 147 147 SER SER A . n D 4 140 SER 140 148 148 SER SER A . n D 4 141 ASN 141 149 149 ASN ASN A . n D 4 142 ASN 142 150 150 ASN ASN A . n D 4 143 ASN 143 151 151 ASN ASN A . n D 4 144 ILE 144 152 152 ILE ILE A . n D 4 145 ALA 145 153 153 ALA ALA A . n D 4 146 ARG 146 154 154 ARG ARG A . n D 4 147 ILE 147 155 155 ILE ILE A . n D 4 148 THR 148 156 156 THR THR A . n D 4 149 GLY 149 157 157 GLY GLY A . n D 4 150 MET 150 158 158 MET MET A . n D 4 151 VAL 151 159 159 VAL VAL A . n D 4 152 GLU 152 160 160 GLU GLU A . n D 4 153 ARG 153 161 161 ARG ARG A . n D 4 154 LEU 154 162 162 LEU LEU A . n D 4 155 CYS 155 163 163 CYS CYS A . n D 4 156 GLN 156 164 164 GLN GLN A . n D 4 157 ALA 157 165 165 ALA ALA A . n D 4 158 PHE 158 166 166 PHE PHE A . n D 4 159 GLY 159 167 167 GLY GLY A . n D 4 160 PRO 160 168 168 PRO PRO A . n D 4 161 ARG 161 169 169 ARG ARG A . n D 4 162 LEU 162 170 170 LEU LEU A . n D 4 163 ILE 163 171 171 ILE ILE A . n D 4 164 GLN 164 172 172 GLN GLN A . n D 4 165 LEU 165 173 173 LEU LEU A . n D 4 166 ASP 166 174 174 ASP ASP A . n D 4 167 ASP 167 175 175 ASP ASP A . n D 4 168 VAL 168 176 176 VAL VAL A . n D 4 169 THR 169 177 177 THR THR A . n D 4 170 TYR 170 178 178 TYR TYR A . n D 4 171 HIS 171 179 179 HIS HIS A . n D 4 172 GLY 172 180 180 GLY GLY A . n D 4 173 PHE 173 181 181 PHE PHE A . n D 4 174 PRO 174 182 182 PRO PRO A . n D 4 175 SER 175 183 183 SER SER A . n D 4 176 LEU 176 184 184 LEU LEU A . n D 4 177 GLN 177 185 185 GLN GLN A . n D 4 178 ALA 178 186 186 ALA ALA A . n D 4 179 LEU 179 187 187 LEU LEU A . n D 4 180 ALA 180 188 188 ALA ALA A . n D 4 181 GLY 181 189 189 GLY GLY A . n D 4 182 PRO 182 190 190 PRO PRO A . n D 4 183 GLU 183 191 191 GLU GLU A . n D 4 184 VAL 184 192 192 VAL VAL A . n D 4 185 GLU 185 193 193 GLU GLU A . n D 4 186 ALA 186 194 194 ALA ALA A . n D 4 187 HIS 187 195 195 HIS HIS A . n D 4 188 LEU 188 196 196 LEU LEU A . n D 4 189 ARG 189 197 197 ARG ARG A . n D 4 190 LYS 190 198 198 LYS LYS A . n D 4 191 LEU 191 199 199 LEU LEU A . n D 4 192 GLY 192 200 200 GLY GLY A . n D 4 193 LEU 193 201 201 LEU LEU A . n D 4 194 GLY 194 202 202 GLY GLY A . n D 4 195 TYR 195 203 203 TYR TYR A . n D 4 196 ARG 196 204 204 ARG ARG A . n D 4 197 ALA 197 205 205 ALA ALA A . n D 4 198 ARG 198 206 206 ARG ARG A . n D 4 199 TYR 199 207 207 TYR TYR A . n D 4 200 VAL 200 208 208 VAL VAL A . n D 4 201 SER 201 209 209 SER SER A . n D 4 202 ALA 202 210 210 ALA ALA A . n D 4 203 SER 203 211 211 SER SER A . n D 4 204 ALA 204 212 212 ALA ALA A . n D 4 205 ARG 205 213 213 ARG ARG A . n D 4 206 ALA 206 214 214 ALA ALA A . n D 4 207 ILE 207 215 215 ILE ILE A . n D 4 208 LEU 208 216 216 LEU LEU A . n D 4 209 GLU 209 217 217 GLU GLU A . n D 4 210 GLU 210 218 218 GLU GLU A . n D 4 211 GLN 211 219 219 GLN GLN A . n D 4 212 GLY 212 220 220 GLY GLY A . n D 4 213 GLY 213 221 221 GLY GLY A . n D 4 214 LEU 214 222 222 LEU LEU A . n D 4 215 ALA 215 223 223 ALA ALA A . n D 4 216 TRP 216 224 224 TRP TRP A . n D 4 217 LEU 217 225 225 LEU LEU A . n D 4 218 GLN 218 226 226 GLN GLN A . n D 4 219 GLN 219 227 227 GLN GLN A . n D 4 220 LEU 220 228 228 LEU LEU A . n D 4 221 ARG 221 229 229 ARG ARG A . n D 4 222 GLU 222 230 230 GLU GLU A . n D 4 223 SER 223 231 231 SER SER A . n D 4 224 SER 224 232 232 SER SER A . n D 4 225 TYR 225 233 233 TYR TYR A . n D 4 226 GLU 226 234 234 GLU GLU A . n D 4 227 GLU 227 235 235 GLU GLU A . n D 4 228 ALA 228 236 236 ALA ALA A . n D 4 229 HIS 229 237 237 HIS HIS A . n D 4 230 LYS 230 238 238 LYS LYS A . n D 4 231 ALA 231 239 239 ALA ALA A . n D 4 232 LEU 232 240 240 LEU LEU A . n D 4 233 CYS 233 241 241 CYS CYS A . n D 4 234 ILE 234 242 242 ILE ILE A . n D 4 235 LEU 235 243 243 LEU LEU A . n D 4 236 PRO 236 244 244 PRO PRO A . n D 4 237 GLY 237 245 245 GLY GLY A . n D 4 238 VAL 238 246 246 VAL VAL A . n D 4 239 GLY 239 247 247 GLY GLY A . n D 4 240 THR 240 248 248 THR THR A . n D 4 241 LYS 241 249 249 LYS LYS A . n D 4 242 VAL 242 250 250 VAL VAL A . n D 4 243 ALA 243 251 251 ALA ALA A . n D 4 244 ASP 244 252 252 ASP ASP A . n D 4 245 CYS 245 253 253 CYS CYS A . n D 4 246 ILE 246 254 254 ILE ILE A . n D 4 247 CYS 247 255 255 CYS CYS A . n D 4 248 LEU 248 256 256 LEU LEU A . n D 4 249 MET 249 257 257 MET MET A . n D 4 250 ALA 250 258 258 ALA ALA A . n D 4 251 LEU 251 259 259 LEU LEU A . n D 4 252 ASP 252 260 260 ASP ASP A . n D 4 253 LYS 253 261 261 LYS LYS A . n D 4 254 PRO 254 262 262 PRO PRO A . n D 4 255 GLN 255 263 263 GLN GLN A . n D 4 256 ALA 256 264 264 ALA ALA A . n D 4 257 VAL 257 265 265 VAL VAL A . n D 4 258 PRO 258 266 266 PRO PRO A . n D 4 259 VAL 259 267 267 VAL VAL A . n D 4 260 GLU 260 268 268 GLU GLU A . n D 4 261 VAL 261 269 269 VAL VAL A . n D 4 262 HIS 262 270 270 HIS HIS A . n D 4 263 MET 263 271 271 MET MET A . n D 4 264 TRP 264 272 272 TRP TRP A . n D 4 265 HIS 265 273 273 HIS HIS A . n D 4 266 ILE 266 274 274 ILE ILE A . n D 4 267 ALA 267 275 275 ALA ALA A . n D 4 268 GLN 268 276 276 GLN GLN A . n D 4 269 ARG 269 277 277 ARG ARG A . n D 4 270 ASP 270 278 278 ASP ASP A . n D 4 271 TYR 271 279 279 TYR TYR A . n D 4 272 SER 272 280 280 SER SER A . n D 4 273 TRP 273 281 281 TRP TRP A . n D 4 274 HIS 274 282 282 HIS HIS A . n D 4 275 PRO 275 283 283 PRO PRO A . n D 4 276 THR 276 284 284 THR THR A . n D 4 277 THR 277 285 285 THR THR A . n D 4 278 SER 278 286 286 SER SER A . n D 4 279 GLN 279 287 287 GLN GLN A . n D 4 280 ALA 280 288 288 ALA ALA A . n D 4 281 LYS 281 289 289 LYS LYS A . n D 4 282 GLY 282 290 290 GLY GLY A . n D 4 283 PRO 283 291 291 PRO PRO A . n D 4 284 SER 284 292 292 SER SER A . n D 4 285 PRO 285 293 293 PRO PRO A . n D 4 286 GLN 286 294 294 GLN GLN A . n D 4 287 THR 287 295 295 THR THR A . n D 4 288 ASN 288 296 296 ASN ASN A . n D 4 289 LYS 289 297 297 LYS LYS A . n D 4 290 GLU 290 298 298 GLU GLU A . n D 4 291 LEU 291 299 299 LEU LEU A . n D 4 292 GLY 292 300 300 GLY GLY A . n D 4 293 ASN 293 301 301 ASN ASN A . n D 4 294 PHE 294 302 302 PHE PHE A . n D 4 295 PHE 295 303 303 PHE PHE A . n D 4 296 ARG 296 304 304 ARG ARG A . n D 4 297 SER 297 305 305 SER SER A . n D 4 298 LEU 298 306 306 LEU LEU A . n D 4 299 TRP 299 307 307 TRP TRP A . n D 4 300 GLY 300 308 308 GLY GLY A . n D 4 301 PRO 301 309 309 PRO PRO A . n D 4 302 TYR 302 310 310 TYR TYR A . n D 4 303 ALA 303 311 311 ALA ALA A . n D 4 304 GLY 304 312 312 GLY GLY A . n D 4 305 TRP 305 313 313 TRP TRP A . n D 4 306 ALA 306 314 314 ALA ALA A . n D 4 307 GLN 307 315 315 GLN GLN A . n D 4 308 ALA 308 316 316 ALA ALA A . n D 4 309 VAL 309 317 317 VAL VAL A . n D 4 310 LEU 310 318 318 LEU LEU A . n D 4 311 PHE 311 319 319 PHE PHE A . n D 4 312 SER 312 320 320 SER SER A . n D 4 313 ALA 313 321 321 ALA ALA A . n D 4 314 ASP 314 322 322 ASP ASP A . n D 4 315 LEU 315 323 323 LEU LEU A . n D 4 316 ARG 316 324 324 ARG ARG A . n D 4 317 GLN 317 325 325 GLN GLN A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 CA 1 101 101 CA CA C . F 6 HOH 1 91 91 HOH HOH B . F 6 HOH 2 92 92 HOH HOH B . G 6 HOH 1 61 61 HOH HOH D . H 6 HOH 1 326 1 HOH HOH A . H 6 HOH 2 327 2 HOH HOH A . H 6 HOH 3 328 3 HOH HOH A . H 6 HOH 4 329 4 HOH HOH A . H 6 HOH 5 330 5 HOH HOH A . H 6 HOH 6 331 6 HOH HOH A . H 6 HOH 7 332 7 HOH HOH A . H 6 HOH 8 333 8 HOH HOH A . H 6 HOH 9 334 9 HOH HOH A . H 6 HOH 10 335 10 HOH HOH A . H 6 HOH 11 336 11 HOH HOH A . H 6 HOH 12 337 12 HOH HOH A . H 6 HOH 13 338 13 HOH HOH A . H 6 HOH 14 339 14 HOH HOH A . H 6 HOH 15 340 15 HOH HOH A . H 6 HOH 16 341 16 HOH HOH A . H 6 HOH 17 342 17 HOH HOH A . H 6 HOH 18 343 18 HOH HOH A . H 6 HOH 19 344 19 HOH HOH A . H 6 HOH 20 345 20 HOH HOH A . H 6 HOH 21 346 21 HOH HOH A . H 6 HOH 22 347 22 HOH HOH A . H 6 HOH 23 348 23 HOH HOH A . H 6 HOH 24 349 24 HOH HOH A . H 6 HOH 25 350 25 HOH HOH A . H 6 HOH 26 351 26 HOH HOH A . H 6 HOH 27 352 27 HOH HOH A . H 6 HOH 28 353 28 HOH HOH A . H 6 HOH 29 354 29 HOH HOH A . H 6 HOH 30 355 30 HOH HOH A . H 6 HOH 31 356 31 HOH HOH A . H 6 HOH 32 357 32 HOH HOH A . H 6 HOH 33 358 33 HOH HOH A . H 6 HOH 34 359 34 HOH HOH A . H 6 HOH 35 360 35 HOH HOH A . H 6 HOH 36 361 36 HOH HOH A . H 6 HOH 37 362 37 HOH HOH A . H 6 HOH 38 363 38 HOH HOH A . H 6 HOH 39 364 39 HOH HOH A . H 6 HOH 40 365 40 HOH HOH A . H 6 HOH 41 366 41 HOH HOH A . H 6 HOH 42 367 42 HOH HOH A . H 6 HOH 43 368 43 HOH HOH A . H 6 HOH 44 369 44 HOH HOH A . H 6 HOH 45 370 45 HOH HOH A . H 6 HOH 46 371 46 HOH HOH A . H 6 HOH 47 372 47 HOH HOH A . H 6 HOH 48 373 48 HOH HOH A . H 6 HOH 49 374 49 HOH HOH A . H 6 HOH 50 375 50 HOH HOH A . H 6 HOH 51 376 51 HOH HOH A . H 6 HOH 52 377 52 HOH HOH A . H 6 HOH 53 378 53 HOH HOH A . H 6 HOH 54 379 54 HOH HOH A . H 6 HOH 55 380 55 HOH HOH A . H 6 HOH 56 381 56 HOH HOH A . H 6 HOH 57 382 57 HOH HOH A . H 6 HOH 58 383 58 HOH HOH A . H 6 HOH 59 384 59 HOH HOH A . H 6 HOH 60 385 60 HOH HOH A . H 6 HOH 61 386 62 HOH HOH A . H 6 HOH 62 387 63 HOH HOH A . H 6 HOH 63 388 64 HOH HOH A . H 6 HOH 64 389 65 HOH HOH A . H 6 HOH 65 390 66 HOH HOH A . H 6 HOH 66 391 67 HOH HOH A . H 6 HOH 67 392 68 HOH HOH A . H 6 HOH 68 393 69 HOH HOH A . H 6 HOH 69 394 70 HOH HOH A . H 6 HOH 70 395 71 HOH HOH A . H 6 HOH 71 396 72 HOH HOH A . H 6 HOH 72 397 73 HOH HOH A . H 6 HOH 73 398 74 HOH HOH A . H 6 HOH 74 399 75 HOH HOH A . H 6 HOH 75 400 76 HOH HOH A . H 6 HOH 76 401 77 HOH HOH A . H 6 HOH 77 402 78 HOH HOH A . H 6 HOH 78 403 79 HOH HOH A . H 6 HOH 79 404 80 HOH HOH A . H 6 HOH 80 405 81 HOH HOH A . H 6 HOH 81 406 82 HOH HOH A . H 6 HOH 82 407 83 HOH HOH A . H 6 HOH 83 408 84 HOH HOH A . H 6 HOH 84 409 85 HOH HOH A . H 6 HOH 85 410 86 HOH HOH A . H 6 HOH 86 411 87 HOH HOH A . H 6 HOH 87 412 88 HOH HOH A . H 6 HOH 88 413 89 HOH HOH A . H 6 HOH 89 414 90 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 71 ? CG ? D GLU 63 CG 2 1 Y 1 A GLU 71 ? CD ? D GLU 63 CD 3 1 Y 1 A GLU 71 ? OE1 ? D GLU 63 OE1 4 1 Y 1 A GLU 71 ? OE2 ? D GLU 63 OE2 5 1 Y 1 A GLN 84 ? CG ? D GLN 76 CG 6 1 Y 1 A GLN 84 ? CD ? D GLN 76 CD 7 1 Y 1 A GLN 84 ? OE1 ? D GLN 76 OE1 8 1 Y 1 A GLN 84 ? NE2 ? D GLN 76 NE2 9 1 Y 1 A ARG 87 ? CG ? D ARG 79 CG 10 1 Y 1 A ARG 87 ? CD ? D ARG 79 CD 11 1 Y 1 A ARG 87 ? NE ? D ARG 79 NE 12 1 Y 1 A ARG 87 ? CZ ? D ARG 79 CZ 13 1 Y 1 A ARG 87 ? NH1 ? D ARG 79 NH1 14 1 Y 1 A ARG 87 ? NH2 ? D ARG 79 NH2 15 1 Y 1 A GLU 122 ? CG ? D GLU 114 CG 16 1 Y 1 A GLU 122 ? CD ? D GLU 114 CD 17 1 Y 1 A GLU 122 ? OE1 ? D GLU 114 OE1 18 1 Y 1 A GLU 122 ? OE2 ? D GLU 114 OE2 19 1 Y 1 A GLN 125 ? CG ? D GLN 117 CG 20 1 Y 1 A GLN 125 ? CD ? D GLN 117 CD 21 1 Y 1 A GLN 125 ? OE1 ? D GLN 117 OE1 22 1 Y 1 A GLN 125 ? NE2 ? D GLN 117 NE2 23 1 Y 1 A GLN 128 ? CG ? D GLN 120 CG 24 1 Y 1 A GLN 128 ? CD ? D GLN 120 CD 25 1 Y 1 A GLN 128 ? OE1 ? D GLN 120 OE1 26 1 Y 1 A GLN 128 ? NE2 ? D GLN 120 NE2 27 1 Y 1 A ARG 134 ? CG ? D ARG 126 CG 28 1 Y 1 A ARG 134 ? CD ? D ARG 126 CD 29 1 Y 1 A ARG 134 ? NE ? D ARG 126 NE 30 1 Y 1 A ARG 134 ? CZ ? D ARG 126 CZ 31 1 Y 1 A ARG 134 ? NH1 ? D ARG 126 NH1 32 1 Y 1 A ARG 134 ? NH2 ? D ARG 126 NH2 33 1 Y 1 A GLN 164 ? CG ? D GLN 156 CG 34 1 Y 1 A GLN 164 ? CD ? D GLN 156 CD 35 1 Y 1 A GLN 164 ? OE1 ? D GLN 156 OE1 36 1 Y 1 A GLN 164 ? NE2 ? D GLN 156 NE2 37 1 Y 1 A GLN 227 ? CG ? D GLN 219 CG 38 1 Y 1 A GLN 227 ? CD ? D GLN 219 CD 39 1 Y 1 A GLN 227 ? OE1 ? D GLN 219 OE1 40 1 Y 1 A GLN 227 ? NE2 ? D GLN 219 NE2 41 1 Y 1 A SER 286 ? OG ? D SER 278 OG 42 1 Y 1 A LYS 289 ? CG ? D LYS 281 CG 43 1 Y 1 A LYS 289 ? CD ? D LYS 281 CD 44 1 Y 1 A LYS 289 ? CE ? D LYS 281 CE 45 1 Y 1 A LYS 289 ? NZ ? D LYS 281 NZ 46 1 Y 1 A GLN 294 ? CG ? D GLN 286 CG 47 1 Y 1 A GLN 294 ? CD ? D GLN 286 CD 48 1 Y 1 A GLN 294 ? OE1 ? D GLN 286 OE1 49 1 Y 1 A GLN 294 ? NE2 ? D GLN 286 NE2 50 1 Y 1 A GLN 325 ? CG ? D GLN 317 CG 51 1 Y 1 A GLN 325 ? CD ? D GLN 317 CD 52 1 Y 1 A GLN 325 ? OE1 ? D GLN 317 OE1 53 1 Y 1 A GLN 325 ? NE2 ? D GLN 317 NE2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 CNS refinement . ? 3 CNS phasing . ? 4 # _cell.entry_id 1M3H _cell.length_a 92.345 _cell.length_b 92.345 _cell.length_c 211.345 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1M3H _symmetry.space_group_name_H-M 'P 65 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? # _exptl.entry_id 1M3H _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.89 _exptl_crystal.density_percent_sol 57.40 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details 'PEG 8000, cacodylate, Calcium Acetate, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.details 1 1 1 'PEG 8000' ? ? ? 1 2 1 cacodylate ? ? ? 1 3 1 'Calcium Acetate' ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210' _diffrn_detector.pdbx_collection_date 2001-12-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator NULL _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9500 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'CHESS BEAMLINE A1' _diffrn_source.pdbx_synchrotron_site CHESS _diffrn_source.pdbx_synchrotron_beamline A1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9500 # _reflns.entry_id 1M3H _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50 _reflns.d_resolution_high 2.05 _reflns.number_obs 33658 _reflns.number_all 34306 _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs 0.07 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 23.1 _reflns.B_iso_Wilson_estimate 21.2 _reflns.pdbx_redundancy 5.2 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.05 _reflns_shell.d_res_low 2.12 _reflns_shell.percent_possible_all 88.4 _reflns_shell.Rmerge_I_obs 0.612 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.1 _reflns_shell.pdbx_redundancy 4.53 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1M3H _refine.ls_number_reflns_obs 27446 _refine.ls_number_reflns_all 34306 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF 212482.45 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 26.66 _refine.ls_d_res_high 2.05 _refine.ls_percent_reflns_obs 80.0 _refine.ls_R_factor_obs 0.239 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.239 _refine.ls_R_factor_R_free 0.282 _refine.ls_R_factor_R_free_error 0.005 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.0 _refine.ls_number_reflns_R_free 2754 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 49.9 _refine.aniso_B[1][1] 5.67 _refine.aniso_B[2][2] 5.67 _refine.aniso_B[3][3] -11.35 _refine.aniso_B[1][2] 4.10 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.371268 _refine.solvent_model_param_bsol 49.2779 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 1EBM _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1M3H _refine_analyze.Luzzati_coordinate_error_obs 0.31 _refine_analyze.Luzzati_sigma_a_obs 0.36 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.37 _refine_analyze.Luzzati_sigma_a_free 0.40 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2440 _refine_hist.pdbx_number_atoms_nucleic_acid 607 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 92 _refine_hist.number_atoms_total 3140 _refine_hist.d_res_high 2.05 _refine_hist.d_res_low 26.66 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.006 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.2 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 20.8 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.98 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.38 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.16 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 1.82 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 2.70 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.05 _refine_ls_shell.d_res_low 2.18 _refine_ls_shell.number_reflns_R_work 2605 _refine_ls_shell.R_factor_R_work 0.347 _refine_ls_shell.percent_reflns_obs 51.6 _refine_ls_shell.R_factor_R_free 0.372 _refine_ls_shell.R_factor_R_free_error 0.022 _refine_ls_shell.percent_reflns_R_free 9.5 _refine_ls_shell.number_reflns_R_free 275 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 DNA-RNA_REP.PARAM DNA-RNA.TOP 'X-RAY DIFFRACTION' 3 WATER_REP.PARAM WATER.TOP 'X-RAY DIFFRACTION' 4 ION.PARAM ION.TOP 'X-RAY DIFFRACTION' 5 SJC_D SJC_D 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 1M3H _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1M3H _struct.title 'Crystal Structure of Hogg1 D268E Mutant with Product Oligonucleotide' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1M3H _struct_keywords.pdbx_keywords HYDROLASE/DNA _struct_keywords.text 'Protein-DNA complex, end product, DNA repair, DNA glycosylase, mutant, enzyme, HYDROLASE-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 6 ? H N N 6 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP OGG1_HUMAN 4 ;GHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLADQVWTLTQTEEQLHCTVYRGDKSQASRPTPD ELEAVRKYFQLDVTLAQLYHHWGSVDSHFQEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLI QLDDVTYHGFPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKALCILPGVGTKVA DCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELGNFFRSLWGPYAGWAQAVLFSADLRQ ; 12 O15527 ? 2 PDB 1M3H 1 ? ? 1M3H ? 3 PDB 1M3H 2 ? ? 1M3H ? 4 PDB 1M3H 3 ? ? 1M3H ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1M3H A 4 ? 317 ? O15527 12 ? 325 ? 12 325 2 2 1M3H B 1 ? 15 ? 1M3H 1 ? 15 ? 1 15 3 3 1M3H C 1 ? 8 ? 1M3H 16 ? 23 ? 16 23 4 4 1M3H D 1 ? 7 ? 1M3H 24 ? 30 ? 24 30 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1M3H GLY A 1 ? UNP O15527 ? ? 'cloning artifact' 9 1 1 1M3H SER A 2 ? UNP O15527 ? ? 'cloning artifact' 10 2 1 1M3H GLU A 3 ? UNP O15527 ? ? 'cloning artifact' 11 3 1 1M3H GLU A 260 ? UNP O15527 ASP 268 'engineered mutation' 268 4 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR D 11 ? TRP D 15 ? THR A 19 TRP A 23 5 ? 5 HELX_P HELX_P2 2 ARG D 26 ? LEU D 31 ? ARG A 34 LEU A 39 1 ? 6 HELX_P HELX_P3 3 THR D 81 ? PHE D 92 ? THR A 89 PHE A 100 1 ? 12 HELX_P HELX_P4 4 THR D 97 ? ASP D 109 ? THR A 105 ASP A 117 1 ? 13 HELX_P HELX_P5 5 ASP D 128 ? CYS D 138 ? ASP A 136 CYS A 146 1 ? 11 HELX_P HELX_P6 6 ASN D 143 ? CYS D 155 ? ASN A 151 CYS A 163 1 ? 13 HELX_P HELX_P7 7 ALA D 157 ? GLY D 159 ? ALA A 165 GLY A 167 5 ? 3 HELX_P HELX_P8 8 SER D 175 ? GLY D 181 ? SER A 183 GLY A 189 1 ? 7 HELX_P HELX_P9 9 GLU D 183 ? LEU D 191 ? GLU A 191 LEU A 199 1 ? 9 HELX_P HELX_P10 10 GLY D 192 ? GLY D 192 ? GLY A 200 GLY A 200 5 ? 1 HELX_P HELX_P11 11 LEU D 193 ? GLY D 194 ? LEU A 201 GLY A 202 5 ? 2 HELX_P HELX_P12 12 TYR D 195 ? GLU D 210 ? TYR A 203 GLU A 218 1 ? 16 HELX_P HELX_P13 13 GLY D 213 ? GLN D 218 ? GLY A 221 GLN A 226 1 ? 6 HELX_P HELX_P14 14 SER D 224 ? CYS D 233 ? SER A 232 CYS A 241 1 ? 10 HELX_P HELX_P15 15 GLY D 239 ? ALA D 250 ? GLY A 247 ALA A 258 1 ? 12 HELX_P HELX_P16 16 GLU D 260 ? SER D 272 ? GLU A 268 SER A 280 1 ? 13 HELX_P HELX_P17 17 THR D 287 ? GLY D 300 ? THR A 295 GLY A 308 1 ? 14 HELX_P HELX_P18 18 TYR D 302 ? ARG D 316 ? TYR A 310 ARG A 324 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B DA 7 "O3'" ? ? ? 1_555 B DDX 8 P ? ? C DA 22 C DDX 23 1_555 ? ? ? ? ? ? ? 1.601 ? ? hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 C DC 7 N3 ? ? B DG 1 D DC 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 C DC 7 O2 ? ? B DG 1 D DC 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 1 O6 ? ? ? 1_555 C DC 7 N4 ? ? B DG 1 D DC 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DG 2 N1 ? ? ? 1_555 C DC 6 N3 ? ? B DG 2 D DC 29 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog5 hydrog ? ? A DT 3 N3 ? ? ? 1_555 C DA 5 N1 ? ? B DT 3 D DA 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DT 3 O4 ? ? ? 1_555 C DA 5 N6 ? ? B DT 3 D DA 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DA 4 N1 ? ? ? 1_555 C DT 4 N3 ? ? B DA 4 D DT 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DA 4 N6 ? ? ? 1_555 C DT 4 O4 ? ? B DA 4 D DT 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 5 N1 ? ? ? 1_555 C DC 3 N3 ? ? B DG 5 D DC 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 5 N2 ? ? ? 1_555 C DC 3 O2 ? ? B DG 5 D DC 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 5 O6 ? ? ? 1_555 C DC 3 N4 ? ? B DG 5 D DC 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DA 6 N1 ? ? ? 1_555 C DT 2 N3 ? ? B DA 6 D DT 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DA 6 N6 ? ? ? 1_555 C DT 2 O4 ? ? B DA 6 D DT 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 7 N3 ? ? ? 1_555 C DG 1 N1 ? ? B DC 7 D DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 7 N4 ? ? ? 1_555 C DG 1 O6 ? ? B DC 7 D DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 7 O2 ? ? ? 1_555 C DG 1 N2 ? ? B DC 7 D DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DT 9 N3 ? ? ? 1_555 B DA 7 N1 ? ? B DT 9 C DA 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DT 9 O4 ? ? ? 1_555 B DA 7 N6 ? ? B DT 9 C DA 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DG 10 N1 ? ? ? 1_555 B DC 6 N3 ? ? B DG 10 C DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DG 10 N2 ? ? ? 1_555 B DC 6 O2 ? ? B DG 10 C DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DG 10 O6 ? ? ? 1_555 B DC 6 N4 ? ? B DG 10 C DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DG 11 N1 ? ? ? 1_555 B DC 5 N3 ? ? B DG 11 C DC 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DG 11 N2 ? ? ? 1_555 B DC 5 O2 ? ? B DG 11 C DC 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DG 11 O6 ? ? ? 1_555 B DC 5 N4 ? ? B DG 11 C DC 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DA 12 N1 ? ? ? 1_555 B DT 4 N3 ? ? B DA 12 C DT 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DA 12 N6 ? ? ? 1_555 B DT 4 O4 ? ? B DA 12 C DT 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DC 13 N3 ? ? ? 1_555 B DG 3 N1 ? ? B DC 13 C DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DC 13 N4 ? ? ? 1_555 B DG 3 O6 ? ? B DC 13 C DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DC 13 O2 ? ? ? 1_555 B DG 3 N2 ? ? B DC 13 C DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DG 14 N1 ? ? ? 1_555 B DC 2 N3 ? ? B DG 14 C DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DG 14 N2 ? ? ? 1_555 B DC 2 O2 ? ? B DG 14 C DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DG 14 O6 ? ? ? 1_555 B DC 2 N4 ? ? B DG 14 C DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DC 15 O2 ? ? ? 1_555 B DG 1 N2 ? ? B DC 15 C DG 16 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ALA D 16 ? ILE D 18 ? ALA A 24 ILE A 26 A 2 LEU D 65 ? TYR D 70 ? LEU A 73 TYR A 78 A 3 GLN D 54 ? GLN D 60 ? GLN A 62 GLN A 68 A 4 HIS D 46 ? LEU D 51 ? HIS A 54 LEU A 59 A 5 ARG D 40 ? SER D 43 ? ARG A 48 SER A 51 B 1 ARG D 161 ? LEU D 165 ? ARG A 169 LEU A 173 B 2 VAL D 168 ? HIS D 171 ? VAL A 176 HIS A 179 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ALA D 16 ? N ALA A 24 O CYS D 67 ? O CYS A 75 A 2 3 O HIS D 66 ? O HIS A 74 N THR D 59 ? N THR A 67 A 3 4 O LEU D 58 ? O LEU A 66 N TRP D 47 ? N TRP A 55 A 4 5 O SER D 48 ? O SER A 56 N ARG D 40 ? N ARG A 48 B 1 2 N LEU D 165 ? N LEU A 173 O VAL D 168 ? O VAL A 176 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id C _struct_site.pdbx_auth_comp_id CA _struct_site.pdbx_auth_seq_id 101 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 1 _struct_site.details 'BINDING SITE FOR RESIDUE CA C 101' # _struct_site_gen.id 1 _struct_site_gen.site_id AC1 _struct_site_gen.pdbx_num_res 1 _struct_site_gen.label_comp_id DA _struct_site_gen.label_asym_id B _struct_site_gen.label_seq_id 7 _struct_site_gen.pdbx_auth_ins_code ? _struct_site_gen.auth_comp_id DA _struct_site_gen.auth_asym_id C _struct_site_gen.auth_seq_id 22 _struct_site_gen.label_atom_id . _struct_site_gen.label_alt_id ? _struct_site_gen.symmetry 1_555 _struct_site_gen.details ? # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 "O3'" _pdbx_validate_symm_contact.auth_asym_id_1 B _pdbx_validate_symm_contact.auth_comp_id_1 DC _pdbx_validate_symm_contact.auth_seq_id_1 15 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 "O3'" _pdbx_validate_symm_contact.auth_asym_id_2 B _pdbx_validate_symm_contact.auth_comp_id_2 DC _pdbx_validate_symm_contact.auth_seq_id_2 15 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 11_655 _pdbx_validate_symm_contact.dist 1.80 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 P B DG 1 ? ? OP3 B DG 1 ? ? 1.523 1.607 -0.084 0.012 N 2 1 P C DG 16 ? ? OP3 C DG 16 ? ? 1.521 1.607 -0.086 0.012 N 3 1 P D DG 24 ? ? OP3 D DG 24 ? ? 1.528 1.607 -0.079 0.012 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 CYS A 28 ? ? -176.51 104.80 2 1 GLN A 43 ? ? -90.07 -64.15 3 1 GLN A 101 ? ? 38.24 52.12 4 1 LEU A 170 ? ? -99.31 -92.98 5 1 ASP A 174 ? ? 54.38 -128.76 6 1 SER A 286 ? ? -49.78 163.09 7 1 ARG A 324 ? ? -76.08 33.52 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 80 ? D GLY 72 2 1 Y 1 A ASP 81 ? D ASP 73 3 1 Y 1 A LYS 82 ? D LYS 74 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CA CA CA N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 DA OP3 O N N 89 DA P P N N 90 DA OP1 O N N 91 DA OP2 O N N 92 DA "O5'" O N N 93 DA "C5'" C N N 94 DA "C4'" C N R 95 DA "O4'" O N N 96 DA "C3'" C N S 97 DA "O3'" O N N 98 DA "C2'" C N N 99 DA "C1'" C N R 100 DA N9 N Y N 101 DA C8 C Y N 102 DA N7 N Y N 103 DA C5 C Y N 104 DA C6 C Y N 105 DA N6 N N N 106 DA N1 N Y N 107 DA C2 C Y N 108 DA N3 N Y N 109 DA C4 C Y N 110 DA HOP3 H N N 111 DA HOP2 H N N 112 DA "H5'" H N N 113 DA "H5''" H N N 114 DA "H4'" H N N 115 DA "H3'" H N N 116 DA "HO3'" H N N 117 DA "H2'" H N N 118 DA "H2''" H N N 119 DA "H1'" H N N 120 DA H8 H N N 121 DA H61 H N N 122 DA H62 H N N 123 DA H2 H N N 124 DC OP3 O N N 125 DC P P N N 126 DC OP1 O N N 127 DC OP2 O N N 128 DC "O5'" O N N 129 DC "C5'" C N N 130 DC "C4'" C N R 131 DC "O4'" O N N 132 DC "C3'" C N S 133 DC "O3'" O N N 134 DC "C2'" C N N 135 DC "C1'" C N R 136 DC N1 N N N 137 DC C2 C N N 138 DC O2 O N N 139 DC N3 N N N 140 DC C4 C N N 141 DC N4 N N N 142 DC C5 C N N 143 DC C6 C N N 144 DC HOP3 H N N 145 DC HOP2 H N N 146 DC "H5'" H N N 147 DC "H5''" H N N 148 DC "H4'" H N N 149 DC "H3'" H N N 150 DC "HO3'" H N N 151 DC "H2'" H N N 152 DC "H2''" H N N 153 DC "H1'" H N N 154 DC H41 H N N 155 DC H42 H N N 156 DC H5 H N N 157 DC H6 H N N 158 DDX P P N N 159 DDX OP1 O N N 160 DDX OP2 O N N 161 DDX OP3 O N N 162 DDX "O5'" O N N 163 DDX "C5'" C N N 164 DDX "C4'" C N S 165 DDX "O4'" O N N 166 DDX "C1'" C N S 167 DDX "C3'" C N N 168 DDX "C2'" C N N 169 DDX "O1'" O N N 170 DDX HOP2 H N N 171 DDX HOP3 H N N 172 DDX "H5'" H N N 173 DDX "H5''" H N N 174 DDX "H4'" H N N 175 DDX "H1'" H N N 176 DDX "H3'" H N N 177 DDX "H2'" H N N 178 DDX "HO1'" H N N 179 DG OP3 O N N 180 DG P P N N 181 DG OP1 O N N 182 DG OP2 O N N 183 DG "O5'" O N N 184 DG "C5'" C N N 185 DG "C4'" C N R 186 DG "O4'" O N N 187 DG "C3'" C N S 188 DG "O3'" O N N 189 DG "C2'" C N N 190 DG "C1'" C N R 191 DG N9 N Y N 192 DG C8 C Y N 193 DG N7 N Y N 194 DG C5 C Y N 195 DG C6 C N N 196 DG O6 O N N 197 DG N1 N N N 198 DG C2 C N N 199 DG N2 N N N 200 DG N3 N N N 201 DG C4 C Y N 202 DG HOP3 H N N 203 DG HOP2 H N N 204 DG "H5'" H N N 205 DG "H5''" H N N 206 DG "H4'" H N N 207 DG "H3'" H N N 208 DG "HO3'" H N N 209 DG "H2'" H N N 210 DG "H2''" H N N 211 DG "H1'" H N N 212 DG H8 H N N 213 DG H1 H N N 214 DG H21 H N N 215 DG H22 H N N 216 DT OP3 O N N 217 DT P P N N 218 DT OP1 O N N 219 DT OP2 O N N 220 DT "O5'" O N N 221 DT "C5'" C N N 222 DT "C4'" C N R 223 DT "O4'" O N N 224 DT "C3'" C N S 225 DT "O3'" O N N 226 DT "C2'" C N N 227 DT "C1'" C N R 228 DT N1 N N N 229 DT C2 C N N 230 DT O2 O N N 231 DT N3 N N N 232 DT C4 C N N 233 DT O4 O N N 234 DT C5 C N N 235 DT C7 C N N 236 DT C6 C N N 237 DT HOP3 H N N 238 DT HOP2 H N N 239 DT "H5'" H N N 240 DT "H5''" H N N 241 DT "H4'" H N N 242 DT "H3'" H N N 243 DT "HO3'" H N N 244 DT "H2'" H N N 245 DT "H2''" H N N 246 DT "H1'" H N N 247 DT H3 H N N 248 DT H71 H N N 249 DT H72 H N N 250 DT H73 H N N 251 DT H6 H N N 252 GLN N N N N 253 GLN CA C N S 254 GLN C C N N 255 GLN O O N N 256 GLN CB C N N 257 GLN CG C N N 258 GLN CD C N N 259 GLN OE1 O N N 260 GLN NE2 N N N 261 GLN OXT O N N 262 GLN H H N N 263 GLN H2 H N N 264 GLN HA H N N 265 GLN HB2 H N N 266 GLN HB3 H N N 267 GLN HG2 H N N 268 GLN HG3 H N N 269 GLN HE21 H N N 270 GLN HE22 H N N 271 GLN HXT H N N 272 GLU N N N N 273 GLU CA C N S 274 GLU C C N N 275 GLU O O N N 276 GLU CB C N N 277 GLU CG C N N 278 GLU CD C N N 279 GLU OE1 O N N 280 GLU OE2 O N N 281 GLU OXT O N N 282 GLU H H N N 283 GLU H2 H N N 284 GLU HA H N N 285 GLU HB2 H N N 286 GLU HB3 H N N 287 GLU HG2 H N N 288 GLU HG3 H N N 289 GLU HE2 H N N 290 GLU HXT H N N 291 GLY N N N N 292 GLY CA C N N 293 GLY C C N N 294 GLY O O N N 295 GLY OXT O N N 296 GLY H H N N 297 GLY H2 H N N 298 GLY HA2 H N N 299 GLY HA3 H N N 300 GLY HXT H N N 301 HIS N N N N 302 HIS CA C N S 303 HIS C C N N 304 HIS O O N N 305 HIS CB C N N 306 HIS CG C Y N 307 HIS ND1 N Y N 308 HIS CD2 C Y N 309 HIS CE1 C Y N 310 HIS NE2 N Y N 311 HIS OXT O N N 312 HIS H H N N 313 HIS H2 H N N 314 HIS HA H N N 315 HIS HB2 H N N 316 HIS HB3 H N N 317 HIS HD1 H N N 318 HIS HD2 H N N 319 HIS HE1 H N N 320 HIS HE2 H N N 321 HIS HXT H N N 322 HOH O O N N 323 HOH H1 H N N 324 HOH H2 H N N 325 ILE N N N N 326 ILE CA C N S 327 ILE C C N N 328 ILE O O N N 329 ILE CB C N S 330 ILE CG1 C N N 331 ILE CG2 C N N 332 ILE CD1 C N N 333 ILE OXT O N N 334 ILE H H N N 335 ILE H2 H N N 336 ILE HA H N N 337 ILE HB H N N 338 ILE HG12 H N N 339 ILE HG13 H N N 340 ILE HG21 H N N 341 ILE HG22 H N N 342 ILE HG23 H N N 343 ILE HD11 H N N 344 ILE HD12 H N N 345 ILE HD13 H N N 346 ILE HXT H N N 347 LEU N N N N 348 LEU CA C N S 349 LEU C C N N 350 LEU O O N N 351 LEU CB C N N 352 LEU CG C N N 353 LEU CD1 C N N 354 LEU CD2 C N N 355 LEU OXT O N N 356 LEU H H N N 357 LEU H2 H N N 358 LEU HA H N N 359 LEU HB2 H N N 360 LEU HB3 H N N 361 LEU HG H N N 362 LEU HD11 H N N 363 LEU HD12 H N N 364 LEU HD13 H N N 365 LEU HD21 H N N 366 LEU HD22 H N N 367 LEU HD23 H N N 368 LEU HXT H N N 369 LYS N N N N 370 LYS CA C N S 371 LYS C C N N 372 LYS O O N N 373 LYS CB C N N 374 LYS CG C N N 375 LYS CD C N N 376 LYS CE C N N 377 LYS NZ N N N 378 LYS OXT O N N 379 LYS H H N N 380 LYS H2 H N N 381 LYS HA H N N 382 LYS HB2 H N N 383 LYS HB3 H N N 384 LYS HG2 H N N 385 LYS HG3 H N N 386 LYS HD2 H N N 387 LYS HD3 H N N 388 LYS HE2 H N N 389 LYS HE3 H N N 390 LYS HZ1 H N N 391 LYS HZ2 H N N 392 LYS HZ3 H N N 393 LYS HXT H N N 394 MET N N N N 395 MET CA C N S 396 MET C C N N 397 MET O O N N 398 MET CB C N N 399 MET CG C N N 400 MET SD S N N 401 MET CE C N N 402 MET OXT O N N 403 MET H H N N 404 MET H2 H N N 405 MET HA H N N 406 MET HB2 H N N 407 MET HB3 H N N 408 MET HG2 H N N 409 MET HG3 H N N 410 MET HE1 H N N 411 MET HE2 H N N 412 MET HE3 H N N 413 MET HXT H N N 414 PHE N N N N 415 PHE CA C N S 416 PHE C C N N 417 PHE O O N N 418 PHE CB C N N 419 PHE CG C Y N 420 PHE CD1 C Y N 421 PHE CD2 C Y N 422 PHE CE1 C Y N 423 PHE CE2 C Y N 424 PHE CZ C Y N 425 PHE OXT O N N 426 PHE H H N N 427 PHE H2 H N N 428 PHE HA H N N 429 PHE HB2 H N N 430 PHE HB3 H N N 431 PHE HD1 H N N 432 PHE HD2 H N N 433 PHE HE1 H N N 434 PHE HE2 H N N 435 PHE HZ H N N 436 PHE HXT H N N 437 PRO N N N N 438 PRO CA C N S 439 PRO C C N N 440 PRO O O N N 441 PRO CB C N N 442 PRO CG C N N 443 PRO CD C N N 444 PRO OXT O N N 445 PRO H H N N 446 PRO HA H N N 447 PRO HB2 H N N 448 PRO HB3 H N N 449 PRO HG2 H N N 450 PRO HG3 H N N 451 PRO HD2 H N N 452 PRO HD3 H N N 453 PRO HXT H N N 454 SER N N N N 455 SER CA C N S 456 SER C C N N 457 SER O O N N 458 SER CB C N N 459 SER OG O N N 460 SER OXT O N N 461 SER H H N N 462 SER H2 H N N 463 SER HA H N N 464 SER HB2 H N N 465 SER HB3 H N N 466 SER HG H N N 467 SER HXT H N N 468 THR N N N N 469 THR CA C N S 470 THR C C N N 471 THR O O N N 472 THR CB C N R 473 THR OG1 O N N 474 THR CG2 C N N 475 THR OXT O N N 476 THR H H N N 477 THR H2 H N N 478 THR HA H N N 479 THR HB H N N 480 THR HG1 H N N 481 THR HG21 H N N 482 THR HG22 H N N 483 THR HG23 H N N 484 THR HXT H N N 485 TRP N N N N 486 TRP CA C N S 487 TRP C C N N 488 TRP O O N N 489 TRP CB C N N 490 TRP CG C Y N 491 TRP CD1 C Y N 492 TRP CD2 C Y N 493 TRP NE1 N Y N 494 TRP CE2 C Y N 495 TRP CE3 C Y N 496 TRP CZ2 C Y N 497 TRP CZ3 C Y N 498 TRP CH2 C Y N 499 TRP OXT O N N 500 TRP H H N N 501 TRP H2 H N N 502 TRP HA H N N 503 TRP HB2 H N N 504 TRP HB3 H N N 505 TRP HD1 H N N 506 TRP HE1 H N N 507 TRP HE3 H N N 508 TRP HZ2 H N N 509 TRP HZ3 H N N 510 TRP HH2 H N N 511 TRP HXT H N N 512 TYR N N N N 513 TYR CA C N S 514 TYR C C N N 515 TYR O O N N 516 TYR CB C N N 517 TYR CG C Y N 518 TYR CD1 C Y N 519 TYR CD2 C Y N 520 TYR CE1 C Y N 521 TYR CE2 C Y N 522 TYR CZ C Y N 523 TYR OH O N N 524 TYR OXT O N N 525 TYR H H N N 526 TYR H2 H N N 527 TYR HA H N N 528 TYR HB2 H N N 529 TYR HB3 H N N 530 TYR HD1 H N N 531 TYR HD2 H N N 532 TYR HE1 H N N 533 TYR HE2 H N N 534 TYR HH H N N 535 TYR HXT H N N 536 VAL N N N N 537 VAL CA C N S 538 VAL C C N N 539 VAL O O N N 540 VAL CB C N N 541 VAL CG1 C N N 542 VAL CG2 C N N 543 VAL OXT O N N 544 VAL H H N N 545 VAL H2 H N N 546 VAL HA H N N 547 VAL HB H N N 548 VAL HG11 H N N 549 VAL HG12 H N N 550 VAL HG13 H N N 551 VAL HG21 H N N 552 VAL HG22 H N N 553 VAL HG23 H N N 554 VAL HXT H N N 555 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DDX P OP1 doub N N 156 DDX P OP2 sing N N 157 DDX P OP3 sing N N 158 DDX P "O5'" sing N N 159 DDX OP2 HOP2 sing N N 160 DDX OP3 HOP3 sing N N 161 DDX "O5'" "C5'" sing N N 162 DDX "C5'" "C4'" sing N N 163 DDX "C5'" "H5'" sing N N 164 DDX "C5'" "H5''" sing N N 165 DDX "C4'" "O4'" sing N N 166 DDX "C4'" "C3'" sing N N 167 DDX "C4'" "H4'" sing N N 168 DDX "O4'" "C1'" sing N N 169 DDX "C1'" "C2'" sing N N 170 DDX "C1'" "O1'" sing N N 171 DDX "C1'" "H1'" sing N N 172 DDX "C3'" "C2'" doub N N 173 DDX "C3'" "H3'" sing N N 174 DDX "C2'" "H2'" sing N N 175 DDX "O1'" "HO1'" sing N N 176 DG OP3 P sing N N 177 DG OP3 HOP3 sing N N 178 DG P OP1 doub N N 179 DG P OP2 sing N N 180 DG P "O5'" sing N N 181 DG OP2 HOP2 sing N N 182 DG "O5'" "C5'" sing N N 183 DG "C5'" "C4'" sing N N 184 DG "C5'" "H5'" sing N N 185 DG "C5'" "H5''" sing N N 186 DG "C4'" "O4'" sing N N 187 DG "C4'" "C3'" sing N N 188 DG "C4'" "H4'" sing N N 189 DG "O4'" "C1'" sing N N 190 DG "C3'" "O3'" sing N N 191 DG "C3'" "C2'" sing N N 192 DG "C3'" "H3'" sing N N 193 DG "O3'" "HO3'" sing N N 194 DG "C2'" "C1'" sing N N 195 DG "C2'" "H2'" sing N N 196 DG "C2'" "H2''" sing N N 197 DG "C1'" N9 sing N N 198 DG "C1'" "H1'" sing N N 199 DG N9 C8 sing Y N 200 DG N9 C4 sing Y N 201 DG C8 N7 doub Y N 202 DG C8 H8 sing N N 203 DG N7 C5 sing Y N 204 DG C5 C6 sing N N 205 DG C5 C4 doub Y N 206 DG C6 O6 doub N N 207 DG C6 N1 sing N N 208 DG N1 C2 sing N N 209 DG N1 H1 sing N N 210 DG C2 N2 sing N N 211 DG C2 N3 doub N N 212 DG N2 H21 sing N N 213 DG N2 H22 sing N N 214 DG N3 C4 sing N N 215 DT OP3 P sing N N 216 DT OP3 HOP3 sing N N 217 DT P OP1 doub N N 218 DT P OP2 sing N N 219 DT P "O5'" sing N N 220 DT OP2 HOP2 sing N N 221 DT "O5'" "C5'" sing N N 222 DT "C5'" "C4'" sing N N 223 DT "C5'" "H5'" sing N N 224 DT "C5'" "H5''" sing N N 225 DT "C4'" "O4'" sing N N 226 DT "C4'" "C3'" sing N N 227 DT "C4'" "H4'" sing N N 228 DT "O4'" "C1'" sing N N 229 DT "C3'" "O3'" sing N N 230 DT "C3'" "C2'" sing N N 231 DT "C3'" "H3'" sing N N 232 DT "O3'" "HO3'" sing N N 233 DT "C2'" "C1'" sing N N 234 DT "C2'" "H2'" sing N N 235 DT "C2'" "H2''" sing N N 236 DT "C1'" N1 sing N N 237 DT "C1'" "H1'" sing N N 238 DT N1 C2 sing N N 239 DT N1 C6 sing N N 240 DT C2 O2 doub N N 241 DT C2 N3 sing N N 242 DT N3 C4 sing N N 243 DT N3 H3 sing N N 244 DT C4 O4 doub N N 245 DT C4 C5 sing N N 246 DT C5 C7 sing N N 247 DT C5 C6 doub N N 248 DT C7 H71 sing N N 249 DT C7 H72 sing N N 250 DT C7 H73 sing N N 251 DT C6 H6 sing N N 252 GLN N CA sing N N 253 GLN N H sing N N 254 GLN N H2 sing N N 255 GLN CA C sing N N 256 GLN CA CB sing N N 257 GLN CA HA sing N N 258 GLN C O doub N N 259 GLN C OXT sing N N 260 GLN CB CG sing N N 261 GLN CB HB2 sing N N 262 GLN CB HB3 sing N N 263 GLN CG CD sing N N 264 GLN CG HG2 sing N N 265 GLN CG HG3 sing N N 266 GLN CD OE1 doub N N 267 GLN CD NE2 sing N N 268 GLN NE2 HE21 sing N N 269 GLN NE2 HE22 sing N N 270 GLN OXT HXT sing N N 271 GLU N CA sing N N 272 GLU N H sing N N 273 GLU N H2 sing N N 274 GLU CA C sing N N 275 GLU CA CB sing N N 276 GLU CA HA sing N N 277 GLU C O doub N N 278 GLU C OXT sing N N 279 GLU CB CG sing N N 280 GLU CB HB2 sing N N 281 GLU CB HB3 sing N N 282 GLU CG CD sing N N 283 GLU CG HG2 sing N N 284 GLU CG HG3 sing N N 285 GLU CD OE1 doub N N 286 GLU CD OE2 sing N N 287 GLU OE2 HE2 sing N N 288 GLU OXT HXT sing N N 289 GLY N CA sing N N 290 GLY N H sing N N 291 GLY N H2 sing N N 292 GLY CA C sing N N 293 GLY CA HA2 sing N N 294 GLY CA HA3 sing N N 295 GLY C O doub N N 296 GLY C OXT sing N N 297 GLY OXT HXT sing N N 298 HIS N CA sing N N 299 HIS N H sing N N 300 HIS N H2 sing N N 301 HIS CA C sing N N 302 HIS CA CB sing N N 303 HIS CA HA sing N N 304 HIS C O doub N N 305 HIS C OXT sing N N 306 HIS CB CG sing N N 307 HIS CB HB2 sing N N 308 HIS CB HB3 sing N N 309 HIS CG ND1 sing Y N 310 HIS CG CD2 doub Y N 311 HIS ND1 CE1 doub Y N 312 HIS ND1 HD1 sing N N 313 HIS CD2 NE2 sing Y N 314 HIS CD2 HD2 sing N N 315 HIS CE1 NE2 sing Y N 316 HIS CE1 HE1 sing N N 317 HIS NE2 HE2 sing N N 318 HIS OXT HXT sing N N 319 HOH O H1 sing N N 320 HOH O H2 sing N N 321 ILE N CA sing N N 322 ILE N H sing N N 323 ILE N H2 sing N N 324 ILE CA C sing N N 325 ILE CA CB sing N N 326 ILE CA HA sing N N 327 ILE C O doub N N 328 ILE C OXT sing N N 329 ILE CB CG1 sing N N 330 ILE CB CG2 sing N N 331 ILE CB HB sing N N 332 ILE CG1 CD1 sing N N 333 ILE CG1 HG12 sing N N 334 ILE CG1 HG13 sing N N 335 ILE CG2 HG21 sing N N 336 ILE CG2 HG22 sing N N 337 ILE CG2 HG23 sing N N 338 ILE CD1 HD11 sing N N 339 ILE CD1 HD12 sing N N 340 ILE CD1 HD13 sing N N 341 ILE OXT HXT sing N N 342 LEU N CA sing N N 343 LEU N H sing N N 344 LEU N H2 sing N N 345 LEU CA C sing N N 346 LEU CA CB sing N N 347 LEU CA HA sing N N 348 LEU C O doub N N 349 LEU C OXT sing N N 350 LEU CB CG sing N N 351 LEU CB HB2 sing N N 352 LEU CB HB3 sing N N 353 LEU CG CD1 sing N N 354 LEU CG CD2 sing N N 355 LEU CG HG sing N N 356 LEU CD1 HD11 sing N N 357 LEU CD1 HD12 sing N N 358 LEU CD1 HD13 sing N N 359 LEU CD2 HD21 sing N N 360 LEU CD2 HD22 sing N N 361 LEU CD2 HD23 sing N N 362 LEU OXT HXT sing N N 363 LYS N CA sing N N 364 LYS N H sing N N 365 LYS N H2 sing N N 366 LYS CA C sing N N 367 LYS CA CB sing N N 368 LYS CA HA sing N N 369 LYS C O doub N N 370 LYS C OXT sing N N 371 LYS CB CG sing N N 372 LYS CB HB2 sing N N 373 LYS CB HB3 sing N N 374 LYS CG CD sing N N 375 LYS CG HG2 sing N N 376 LYS CG HG3 sing N N 377 LYS CD CE sing N N 378 LYS CD HD2 sing N N 379 LYS CD HD3 sing N N 380 LYS CE NZ sing N N 381 LYS CE HE2 sing N N 382 LYS CE HE3 sing N N 383 LYS NZ HZ1 sing N N 384 LYS NZ HZ2 sing N N 385 LYS NZ HZ3 sing N N 386 LYS OXT HXT sing N N 387 MET N CA sing N N 388 MET N H sing N N 389 MET N H2 sing N N 390 MET CA C sing N N 391 MET CA CB sing N N 392 MET CA HA sing N N 393 MET C O doub N N 394 MET C OXT sing N N 395 MET CB CG sing N N 396 MET CB HB2 sing N N 397 MET CB HB3 sing N N 398 MET CG SD sing N N 399 MET CG HG2 sing N N 400 MET CG HG3 sing N N 401 MET SD CE sing N N 402 MET CE HE1 sing N N 403 MET CE HE2 sing N N 404 MET CE HE3 sing N N 405 MET OXT HXT sing N N 406 PHE N CA sing N N 407 PHE N H sing N N 408 PHE N H2 sing N N 409 PHE CA C sing N N 410 PHE CA CB sing N N 411 PHE CA HA sing N N 412 PHE C O doub N N 413 PHE C OXT sing N N 414 PHE CB CG sing N N 415 PHE CB HB2 sing N N 416 PHE CB HB3 sing N N 417 PHE CG CD1 doub Y N 418 PHE CG CD2 sing Y N 419 PHE CD1 CE1 sing Y N 420 PHE CD1 HD1 sing N N 421 PHE CD2 CE2 doub Y N 422 PHE CD2 HD2 sing N N 423 PHE CE1 CZ doub Y N 424 PHE CE1 HE1 sing N N 425 PHE CE2 CZ sing Y N 426 PHE CE2 HE2 sing N N 427 PHE CZ HZ sing N N 428 PHE OXT HXT sing N N 429 PRO N CA sing N N 430 PRO N CD sing N N 431 PRO N H sing N N 432 PRO CA C sing N N 433 PRO CA CB sing N N 434 PRO CA HA sing N N 435 PRO C O doub N N 436 PRO C OXT sing N N 437 PRO CB CG sing N N 438 PRO CB HB2 sing N N 439 PRO CB HB3 sing N N 440 PRO CG CD sing N N 441 PRO CG HG2 sing N N 442 PRO CG HG3 sing N N 443 PRO CD HD2 sing N N 444 PRO CD HD3 sing N N 445 PRO OXT HXT sing N N 446 SER N CA sing N N 447 SER N H sing N N 448 SER N H2 sing N N 449 SER CA C sing N N 450 SER CA CB sing N N 451 SER CA HA sing N N 452 SER C O doub N N 453 SER C OXT sing N N 454 SER CB OG sing N N 455 SER CB HB2 sing N N 456 SER CB HB3 sing N N 457 SER OG HG sing N N 458 SER OXT HXT sing N N 459 THR N CA sing N N 460 THR N H sing N N 461 THR N H2 sing N N 462 THR CA C sing N N 463 THR CA CB sing N N 464 THR CA HA sing N N 465 THR C O doub N N 466 THR C OXT sing N N 467 THR CB OG1 sing N N 468 THR CB CG2 sing N N 469 THR CB HB sing N N 470 THR OG1 HG1 sing N N 471 THR CG2 HG21 sing N N 472 THR CG2 HG22 sing N N 473 THR CG2 HG23 sing N N 474 THR OXT HXT sing N N 475 TRP N CA sing N N 476 TRP N H sing N N 477 TRP N H2 sing N N 478 TRP CA C sing N N 479 TRP CA CB sing N N 480 TRP CA HA sing N N 481 TRP C O doub N N 482 TRP C OXT sing N N 483 TRP CB CG sing N N 484 TRP CB HB2 sing N N 485 TRP CB HB3 sing N N 486 TRP CG CD1 doub Y N 487 TRP CG CD2 sing Y N 488 TRP CD1 NE1 sing Y N 489 TRP CD1 HD1 sing N N 490 TRP CD2 CE2 doub Y N 491 TRP CD2 CE3 sing Y N 492 TRP NE1 CE2 sing Y N 493 TRP NE1 HE1 sing N N 494 TRP CE2 CZ2 sing Y N 495 TRP CE3 CZ3 doub Y N 496 TRP CE3 HE3 sing N N 497 TRP CZ2 CH2 doub Y N 498 TRP CZ2 HZ2 sing N N 499 TRP CZ3 CH2 sing Y N 500 TRP CZ3 HZ3 sing N N 501 TRP CH2 HH2 sing N N 502 TRP OXT HXT sing N N 503 TYR N CA sing N N 504 TYR N H sing N N 505 TYR N H2 sing N N 506 TYR CA C sing N N 507 TYR CA CB sing N N 508 TYR CA HA sing N N 509 TYR C O doub N N 510 TYR C OXT sing N N 511 TYR CB CG sing N N 512 TYR CB HB2 sing N N 513 TYR CB HB3 sing N N 514 TYR CG CD1 doub Y N 515 TYR CG CD2 sing Y N 516 TYR CD1 CE1 sing Y N 517 TYR CD1 HD1 sing N N 518 TYR CD2 CE2 doub Y N 519 TYR CD2 HD2 sing N N 520 TYR CE1 CZ doub Y N 521 TYR CE1 HE1 sing N N 522 TYR CE2 CZ sing Y N 523 TYR CE2 HE2 sing N N 524 TYR CZ OH sing N N 525 TYR OH HH sing N N 526 TYR OXT HXT sing N N 527 VAL N CA sing N N 528 VAL N H sing N N 529 VAL N H2 sing N N 530 VAL CA C sing N N 531 VAL CA CB sing N N 532 VAL CA HA sing N N 533 VAL C O doub N N 534 VAL C OXT sing N N 535 VAL CB CG1 sing N N 536 VAL CB CG2 sing N N 537 VAL CB HB sing N N 538 VAL CG1 HG11 sing N N 539 VAL CG1 HG12 sing N N 540 VAL CG1 HG13 sing N N 541 VAL CG2 HG21 sing N N 542 VAL CG2 HG22 sing N N 543 VAL CG2 HG23 sing N N 544 VAL OXT HXT sing N N 545 # _ndb_struct_conf_na.entry_id 1M3H _ndb_struct_conf_na.feature 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 1 1_555 C DC 7 1_555 -0.120 -0.203 -0.892 7.942 -28.550 5.600 1 B_DG1:DC30_D B 1 ? D 30 ? 19 1 1 A DG 2 1_555 C DC 6 1_555 -0.540 0.342 -0.381 -7.182 -5.851 7.518 2 B_DG2:DC29_D B 2 ? D 29 ? ? 1 1 A DT 3 1_555 C DA 5 1_555 -0.836 -0.261 0.973 -5.749 -7.515 -5.170 3 B_DT3:DA28_D B 3 ? D 28 ? 20 1 1 A DA 4 1_555 C DT 4 1_555 -0.602 -0.139 -0.061 -6.366 -17.836 2.456 4 B_DA4:DT27_D B 4 ? D 27 ? 20 1 1 A DG 5 1_555 C DC 3 1_555 -0.380 -0.009 -0.094 4.002 -9.311 1.449 5 B_DG5:DC26_D B 5 ? D 26 ? 19 1 1 A DA 6 1_555 C DT 2 1_555 -0.109 0.192 -0.062 2.825 -10.828 -10.143 6 B_DA6:DT25_D B 6 ? D 25 ? 20 1 1 A DC 7 1_555 C DG 1 1_555 0.103 -0.143 -0.301 16.346 1.656 0.150 7 B_DC7:DG24_D B 7 ? D 24 ? 19 1 1 A DT 9 1_555 B DA 7 1_555 -0.338 0.045 -0.039 -11.502 -13.730 5.736 8 B_DT9:DA22_C B 9 ? C 22 ? 20 1 1 A DG 10 1_555 B DC 6 1_555 0.078 -0.043 -0.195 0.957 -4.609 3.500 9 B_DG10:DC21_C B 10 ? C 21 ? 19 1 1 A DG 11 1_555 B DC 5 1_555 0.291 -0.102 0.334 6.704 -13.117 -2.627 10 B_DG11:DC20_C B 11 ? C 20 ? 19 1 1 A DA 12 1_555 B DT 4 1_555 0.233 -0.204 0.342 0.158 -13.594 -0.718 11 B_DA12:DT19_C B 12 ? C 19 ? 20 1 1 A DC 13 1_555 B DG 3 1_555 -0.536 -0.131 0.130 2.523 -9.635 -9.916 12 B_DC13:DG18_C B 13 ? C 18 ? 19 1 1 A DG 14 1_555 B DC 2 1_555 0.272 0.074 0.588 8.095 -4.738 2.899 13 B_DG14:DC17_C B 14 ? C 17 ? 19 1 1 A DC 15 1_555 B DG 1 1_555 1.275 0.310 0.145 14.971 -2.295 1.951 14 B_DC15:DG16_C B 15 ? C 16 ? ? ? # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 1 1_555 C DC 7 1_555 A DG 2 1_555 C DC 6 1_555 0.918 0.844 3.529 -6.190 20.516 35.178 -1.336 -2.078 3.319 30.686 9.258 41.014 1 BB_DG1DG2:DC29DC30_DD B 1 ? D 30 ? B 2 ? D 29 ? 1 A DG 2 1_555 C DC 6 1_555 A DT 3 1_555 C DA 5 1_555 -0.844 -0.972 3.435 -12.007 0.384 26.897 -2.005 -1.182 3.472 0.777 24.330 29.412 2 BB_DG2DT3:DA28DC29_DD B 2 ? D 29 ? B 3 ? D 28 ? 1 A DT 3 1_555 C DA 5 1_555 A DA 4 1_555 C DT 4 1_555 -0.034 0.416 3.359 9.429 1.571 43.679 0.400 0.933 3.295 2.081 -12.495 44.662 3 BB_DT3DA4:DT27DA28_DD B 3 ? D 28 ? B 4 ? D 27 ? 1 A DA 4 1_555 C DT 4 1_555 A DG 5 1_555 C DC 3 1_555 -0.226 0.309 3.158 -1.815 6.036 34.591 -0.368 0.111 3.173 10.048 3.021 35.143 4 BB_DA4DG5:DC26DT27_DD B 4 ? D 27 ? B 5 ? D 26 ? 1 A DG 5 1_555 C DC 3 1_555 A DA 6 1_555 C DT 2 1_555 -0.833 0.102 3.224 -2.982 1.676 33.073 -0.101 0.958 3.286 2.934 5.221 33.245 5 BB_DG5DA6:DT25DC26_DD B 5 ? D 26 ? B 6 ? D 25 ? 1 A DA 6 1_555 C DT 2 1_555 A DC 7 1_555 C DG 1 1_555 1.040 -0.253 3.070 2.419 3.047 31.784 -0.979 -1.473 3.101 5.538 -4.397 32.015 6 BB_DA6DC7:DG24DT25_DD B 6 ? D 25 ? B 7 ? D 24 ? 1 A DT 9 1_555 B DA 7 1_555 A DG 10 1_555 B DC 6 1_555 0.249 1.319 3.028 -0.776 7.350 35.377 1.124 -0.508 3.223 11.934 1.260 36.117 7 BB_DT9DG10:DC21DA22_CC B 9 ? C 22 ? B 10 ? C 21 ? 1 A DG 10 1_555 B DC 6 1_555 A DG 11 1_555 B DC 5 1_555 -1.405 0.830 3.141 -7.605 2.536 35.513 0.971 1.178 3.409 4.094 12.275 36.378 8 BB_DG10DG11:DC20DC21_CC B 10 ? C 21 ? B 11 ? C 20 ? 1 A DG 11 1_555 B DC 5 1_555 A DA 12 1_555 B DT 4 1_555 -0.039 -1.231 3.338 -1.031 1.245 35.053 -2.231 -0.091 3.293 2.067 1.710 35.089 9 BB_DG11DA12:DT19DC20_CC B 11 ? C 20 ? B 12 ? C 19 ? 1 A DA 12 1_555 B DT 4 1_555 A DC 13 1_555 B DG 3 1_555 0.089 -0.346 3.216 2.957 -4.767 29.627 0.301 0.428 3.224 -9.218 -5.718 30.142 10 BB_DA12DC13:DG18DT19_CC B 12 ? C 19 ? B 13 ? C 18 ? 1 A DC 13 1_555 B DG 3 1_555 A DG 14 1_555 B DC 2 1_555 1.337 0.519 3.178 2.779 5.931 41.956 0.117 -1.566 3.296 8.223 -3.853 42.442 11 BB_DC13DG14:DC17DG18_CC B 13 ? C 18 ? B 14 ? C 17 ? 1 A DG 14 1_555 B DC 2 1_555 A DC 15 1_555 B DG 1 1_555 0.274 0.505 3.339 -0.608 3.804 43.376 0.305 -0.429 3.366 5.135 0.821 43.539 12 BB_DG14DC15:DG16DC17_CC B 14 ? C 17 ? B 15 ? C 16 ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1EBM _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 1M3H _atom_sites.fract_transf_matrix[1][1] 0.010829 _atom_sites.fract_transf_matrix[1][2] 0.006252 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012504 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004732 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA N O P S # loop_