data_1MQ2 # _entry.id 1MQ2 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.386 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1MQ2 pdb_00001mq2 10.2210/pdb1mq2/pdb NDB PD0343 ? ? RCSB RCSB017087 ? ? WWPDB D_1000017087 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2003-01-28 2 'Structure model' 1 1 2008-04-28 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' pdbx_struct_conn_angle 6 4 'Structure model' struct_conn 7 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.value' 16 4 'Structure model' '_struct_conn.pdbx_dist_value' 17 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 18 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 19 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 20 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 21 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 22 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 23 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 24 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 25 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 26 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 27 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 28 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 29 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 30 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 31 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 32 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 33 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1MQ2 _pdbx_database_status.recvd_initial_deposition_date 2002-09-13 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1BPX '1BPX IS Human DNA Polymerase Beta Complexed With Gapped DNA' unspecified PDB 1BPY '1BPY IS Human DNA Polymerase Beta Complexed With Gapped DNA and Ddctp' unspecified PDB 1MQ3 '1MQ3 IS Human DNA Polymerase Beta Complexed With Gapped DNA Containing an 8-oxo-7,8-dihydro-Guanine Template Paired with dCTP' unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Krahn, J.M.' 1 'Beard, W.A.' 2 'Miller, H.' 3 'Grollman, A.P.' 4 'Wilson, S.H.' 5 # _citation.id primary _citation.title ;Structure of DNA Polymerase beta with the Mutagenic DNA Lesion 8-oxodeoxyguanine Reveals Structural Insights into its Coding Potential ; _citation.journal_abbrev Structure _citation.journal_volume 11 _citation.page_first 121 _citation.page_last 127 _citation.year 2003 _citation.journal_id_ASTM STRUE6 _citation.country UK _citation.journal_id_ISSN 0969-2126 _citation.journal_id_CSD 2005 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12517346 _citation.pdbx_database_id_DOI '10.1016/S0969-2126(02)00930-9' # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Krahn, J.M.' 1 ? primary 'Beard, W.A.' 2 ? primary 'Miller, H.' 3 ? primary 'Grollman, A.P.' 4 ? primary 'Wilson, S.H.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*CP*CP*GP*AP*CP*(8OG)P*TP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'" 4860.144 1 ? ? ? ? 2 polymer syn "5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*(2DA))-3'" 3069.029 1 ? ? ? ? 3 polymer syn "5'-D(P*GP*TP*CP*GP*G)-3'" 1536.035 1 ? ? ? ? 4 polymer man 'DNA POLYMERASE BETA' 38241.672 1 2.7.7.7 ? ? ? 5 non-polymer syn "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" 331.222 1 ? ? ? ? 6 non-polymer syn 'SODIUM ION' 22.990 2 ? ? ? ? 7 water nat water 18.015 4 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no yes '(DC)(DC)(DG)(DA)(DC)(8OG)(DT)(DC)(DG)(DC)(DA)(DT)(DC)(DA)(DG)(DC)' CCGACGTCGCATCAGC T ? 2 polydeoxyribonucleotide no yes '(DG)(DC)(DT)(DG)(DA)(DT)(DG)(DC)(DG)(2DA)' GCTGATGCGA P ? 3 polydeoxyribonucleotide no no '(DG)(DT)(DC)(DG)(DG)' GTCGG D ? 4 'polypeptide(L)' no no ;MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSE ; ;MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSE ; A ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" DA 6 'SODIUM ION' NA 7 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DC n 1 3 DG n 1 4 DA n 1 5 DC n 1 6 8OG n 1 7 DT n 1 8 DC n 1 9 DG n 1 10 DC n 1 11 DA n 1 12 DT n 1 13 DC n 1 14 DA n 1 15 DG n 1 16 DC n 2 1 DG n 2 2 DC n 2 3 DT n 2 4 DG n 2 5 DA n 2 6 DT n 2 7 DG n 2 8 DC n 2 9 DG n 2 10 2DA n 3 1 DG n 3 2 DT n 3 3 DC n 3 4 DG n 3 5 DG n 4 1 MET n 4 2 SER n 4 3 LYS n 4 4 ARG n 4 5 LYS n 4 6 ALA n 4 7 PRO n 4 8 GLN n 4 9 GLU n 4 10 THR n 4 11 LEU n 4 12 ASN n 4 13 GLY n 4 14 GLY n 4 15 ILE n 4 16 THR n 4 17 ASP n 4 18 MET n 4 19 LEU n 4 20 THR n 4 21 GLU n 4 22 LEU n 4 23 ALA n 4 24 ASN n 4 25 PHE n 4 26 GLU n 4 27 LYS n 4 28 ASN n 4 29 VAL n 4 30 SER n 4 31 GLN n 4 32 ALA n 4 33 ILE n 4 34 HIS n 4 35 LYS n 4 36 TYR n 4 37 ASN n 4 38 ALA n 4 39 TYR n 4 40 ARG n 4 41 LYS n 4 42 ALA n 4 43 ALA n 4 44 SER n 4 45 VAL n 4 46 ILE n 4 47 ALA n 4 48 LYS n 4 49 TYR n 4 50 PRO n 4 51 HIS n 4 52 LYS n 4 53 ILE n 4 54 LYS n 4 55 SER n 4 56 GLY n 4 57 ALA n 4 58 GLU n 4 59 ALA n 4 60 LYS n 4 61 LYS n 4 62 LEU n 4 63 PRO n 4 64 GLY n 4 65 VAL n 4 66 GLY n 4 67 THR n 4 68 LYS n 4 69 ILE n 4 70 ALA n 4 71 GLU n 4 72 LYS n 4 73 ILE n 4 74 ASP n 4 75 GLU n 4 76 PHE n 4 77 LEU n 4 78 ALA n 4 79 THR n 4 80 GLY n 4 81 LYS n 4 82 LEU n 4 83 ARG n 4 84 LYS n 4 85 LEU n 4 86 GLU n 4 87 LYS n 4 88 ILE n 4 89 ARG n 4 90 GLN n 4 91 ASP n 4 92 ASP n 4 93 THR n 4 94 SER n 4 95 SER n 4 96 SER n 4 97 ILE n 4 98 ASN n 4 99 PHE n 4 100 LEU n 4 101 THR n 4 102 ARG n 4 103 VAL n 4 104 SER n 4 105 GLY n 4 106 ILE n 4 107 GLY n 4 108 PRO n 4 109 SER n 4 110 ALA n 4 111 ALA n 4 112 ARG n 4 113 LYS n 4 114 PHE n 4 115 VAL n 4 116 ASP n 4 117 GLU n 4 118 GLY n 4 119 ILE n 4 120 LYS n 4 121 THR n 4 122 LEU n 4 123 GLU n 4 124 ASP n 4 125 LEU n 4 126 ARG n 4 127 LYS n 4 128 ASN n 4 129 GLU n 4 130 ASP n 4 131 LYS n 4 132 LEU n 4 133 ASN n 4 134 HIS n 4 135 HIS n 4 136 GLN n 4 137 ARG n 4 138 ILE n 4 139 GLY n 4 140 LEU n 4 141 LYS n 4 142 TYR n 4 143 PHE n 4 144 GLY n 4 145 ASP n 4 146 PHE n 4 147 GLU n 4 148 LYS n 4 149 ARG n 4 150 ILE n 4 151 PRO n 4 152 ARG n 4 153 GLU n 4 154 GLU n 4 155 MET n 4 156 LEU n 4 157 GLN n 4 158 MET n 4 159 GLN n 4 160 ASP n 4 161 ILE n 4 162 VAL n 4 163 LEU n 4 164 ASN n 4 165 GLU n 4 166 VAL n 4 167 LYS n 4 168 LYS n 4 169 VAL n 4 170 ASP n 4 171 SER n 4 172 GLU n 4 173 TYR n 4 174 ILE n 4 175 ALA n 4 176 THR n 4 177 VAL n 4 178 CYS n 4 179 GLY n 4 180 SER n 4 181 PHE n 4 182 ARG n 4 183 ARG n 4 184 GLY n 4 185 ALA n 4 186 GLU n 4 187 SER n 4 188 SER n 4 189 GLY n 4 190 ASP n 4 191 MET n 4 192 ASP n 4 193 VAL n 4 194 LEU n 4 195 LEU n 4 196 THR n 4 197 HIS n 4 198 PRO n 4 199 SER n 4 200 PHE n 4 201 THR n 4 202 SER n 4 203 GLU n 4 204 SER n 4 205 THR n 4 206 LYS n 4 207 GLN n 4 208 PRO n 4 209 LYS n 4 210 LEU n 4 211 LEU n 4 212 HIS n 4 213 GLN n 4 214 VAL n 4 215 VAL n 4 216 GLU n 4 217 GLN n 4 218 LEU n 4 219 GLN n 4 220 LYS n 4 221 VAL n 4 222 HIS n 4 223 PHE n 4 224 ILE n 4 225 THR n 4 226 ASP n 4 227 THR n 4 228 LEU n 4 229 SER n 4 230 LYS n 4 231 GLY n 4 232 GLU n 4 233 THR n 4 234 LYS n 4 235 PHE n 4 236 MET n 4 237 GLY n 4 238 VAL n 4 239 CYS n 4 240 GLN n 4 241 LEU n 4 242 PRO n 4 243 SER n 4 244 LYS n 4 245 ASN n 4 246 ASP n 4 247 GLU n 4 248 LYS n 4 249 GLU n 4 250 TYR n 4 251 PRO n 4 252 HIS n 4 253 ARG n 4 254 ARG n 4 255 ILE n 4 256 ASP n 4 257 ILE n 4 258 ARG n 4 259 LEU n 4 260 ILE n 4 261 PRO n 4 262 LYS n 4 263 ASP n 4 264 GLN n 4 265 TYR n 4 266 TYR n 4 267 CYS n 4 268 GLY n 4 269 VAL n 4 270 LEU n 4 271 TYR n 4 272 PHE n 4 273 THR n 4 274 GLY n 4 275 SER n 4 276 ASP n 4 277 ILE n 4 278 PHE n 4 279 ASN n 4 280 LYS n 4 281 ASN n 4 282 MET n 4 283 ARG n 4 284 ALA n 4 285 HIS n 4 286 ALA n 4 287 LEU n 4 288 GLU n 4 289 LYS n 4 290 GLY n 4 291 PHE n 4 292 THR n 4 293 ILE n 4 294 ASN n 4 295 GLU n 4 296 TYR n 4 297 THR n 4 298 ILE n 4 299 ARG n 4 300 PRO n 4 301 LEU n 4 302 GLY n 4 303 VAL n 4 304 THR n 4 305 GLY n 4 306 VAL n 4 307 ALA n 4 308 GLY n 4 309 GLU n 4 310 PRO n 4 311 LEU n 4 312 PRO n 4 313 VAL n 4 314 ASP n 4 315 SER n 4 316 GLU n 4 317 LYS n 4 318 ASP n 4 319 ILE n 4 320 PHE n 4 321 ASP n 4 322 TYR n 4 323 ILE n 4 324 GLN n 4 325 TRP n 4 326 LYS n 4 327 TYR n 4 328 ARG n 4 329 GLU n 4 330 PRO n 4 331 LYS n 4 332 ASP n 4 333 ARG n 4 334 SER n 4 335 GLU n # _entity_src_gen.entity_id 4 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 2DA 'DNA linking' n "2',3'-DIDEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O5 P' 315.222 8OG 'DNA linking' n "8-OXO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE" "8-OXO-7,8-DIHYDRO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE" 'C10 H14 N5 O8 P' 363.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC C T . n A 1 2 DC 2 2 2 DC C T . n A 1 3 DG 3 3 3 DG G T . n A 1 4 DA 4 4 4 DA A T . n A 1 5 DC 5 5 5 DC C T . n A 1 6 8OG 6 6 6 8OG 8OG T . n A 1 7 DT 7 7 7 DT T T . n A 1 8 DC 8 8 8 DC C T . n A 1 9 DG 9 9 9 DG G T . n A 1 10 DC 10 10 10 DC C T . n A 1 11 DA 11 11 11 DA A T . n A 1 12 DT 12 12 12 DT T T . n A 1 13 DC 13 13 13 DC C T . n A 1 14 DA 14 14 14 DA A T . n A 1 15 DG 15 15 15 DG G T . n A 1 16 DC 16 16 16 DC C T . n B 2 1 DG 1 1 1 DG G P . n B 2 2 DC 2 2 2 DC C P . n B 2 3 DT 3 3 3 DT T P . n B 2 4 DG 4 4 4 DG G P . n B 2 5 DA 5 5 5 DA A P . n B 2 6 DT 6 6 6 DT T P . n B 2 7 DG 7 7 7 DG G P . n B 2 8 DC 8 8 8 DC C P . n B 2 9 DG 9 9 9 DG G P . n B 2 10 2DA 10 10 10 2DA 2DA P . n C 3 1 DG 1 1 1 DG G D . n C 3 2 DT 2 2 2 DT T D . n C 3 3 DC 3 3 3 DC C D . n C 3 4 DG 4 4 4 DG G D . n C 3 5 DG 5 5 5 DG G D . n D 4 1 MET 1 1 ? ? ? A . n D 4 2 SER 2 2 ? ? ? A . n D 4 3 LYS 3 3 ? ? ? A . n D 4 4 ARG 4 4 ? ? ? A . n D 4 5 LYS 5 5 ? ? ? A . n D 4 6 ALA 6 6 ? ? ? A . n D 4 7 PRO 7 7 ? ? ? A . n D 4 8 GLN 8 8 ? ? ? A . n D 4 9 GLU 9 9 ? ? ? A . n D 4 10 THR 10 10 10 THR THR A . n D 4 11 LEU 11 11 11 LEU LEU A . n D 4 12 ASN 12 12 12 ASN ASN A . n D 4 13 GLY 13 13 13 GLY GLY A . n D 4 14 GLY 14 14 14 GLY GLY A . n D 4 15 ILE 15 15 15 ILE ILE A . n D 4 16 THR 16 16 16 THR THR A . n D 4 17 ASP 17 17 17 ASP ASP A . n D 4 18 MET 18 18 18 MET MET A . n D 4 19 LEU 19 19 19 LEU LEU A . n D 4 20 THR 20 20 20 THR THR A . n D 4 21 GLU 21 21 21 GLU GLU A . n D 4 22 LEU 22 22 22 LEU LEU A . n D 4 23 ALA 23 23 23 ALA ALA A . n D 4 24 ASN 24 24 24 ASN ASN A . n D 4 25 PHE 25 25 25 PHE PHE A . n D 4 26 GLU 26 26 26 GLU GLU A . n D 4 27 LYS 27 27 27 LYS LYS A . n D 4 28 ASN 28 28 28 ASN ASN A . n D 4 29 VAL 29 29 29 VAL VAL A . n D 4 30 SER 30 30 30 SER SER A . n D 4 31 GLN 31 31 31 GLN GLN A . n D 4 32 ALA 32 32 32 ALA ALA A . n D 4 33 ILE 33 33 33 ILE ILE A . n D 4 34 HIS 34 34 34 HIS HIS A . n D 4 35 LYS 35 35 35 LYS LYS A . n D 4 36 TYR 36 36 36 TYR TYR A . n D 4 37 ASN 37 37 37 ASN ASN A . n D 4 38 ALA 38 38 38 ALA ALA A . n D 4 39 TYR 39 39 39 TYR TYR A . n D 4 40 ARG 40 40 40 ARG ARG A . n D 4 41 LYS 41 41 41 LYS LYS A . n D 4 42 ALA 42 42 42 ALA ALA A . n D 4 43 ALA 43 43 43 ALA ALA A . n D 4 44 SER 44 44 44 SER SER A . n D 4 45 VAL 45 45 45 VAL VAL A . n D 4 46 ILE 46 46 46 ILE ILE A . n D 4 47 ALA 47 47 47 ALA ALA A . n D 4 48 LYS 48 48 48 LYS LYS A . n D 4 49 TYR 49 49 49 TYR TYR A . n D 4 50 PRO 50 50 50 PRO PRO A . n D 4 51 HIS 51 51 51 HIS HIS A . n D 4 52 LYS 52 52 52 LYS LYS A . n D 4 53 ILE 53 53 53 ILE ILE A . n D 4 54 LYS 54 54 54 LYS LYS A . n D 4 55 SER 55 55 55 SER SER A . n D 4 56 GLY 56 56 56 GLY GLY A . n D 4 57 ALA 57 57 57 ALA ALA A . n D 4 58 GLU 58 58 58 GLU GLU A . n D 4 59 ALA 59 59 59 ALA ALA A . n D 4 60 LYS 60 60 60 LYS LYS A . n D 4 61 LYS 61 61 61 LYS LYS A . n D 4 62 LEU 62 62 62 LEU LEU A . n D 4 63 PRO 63 63 63 PRO PRO A . n D 4 64 GLY 64 64 64 GLY GLY A . n D 4 65 VAL 65 65 65 VAL VAL A . n D 4 66 GLY 66 66 66 GLY GLY A . n D 4 67 THR 67 67 67 THR THR A . n D 4 68 LYS 68 68 68 LYS LYS A . n D 4 69 ILE 69 69 69 ILE ILE A . n D 4 70 ALA 70 70 70 ALA ALA A . n D 4 71 GLU 71 71 71 GLU GLU A . n D 4 72 LYS 72 72 72 LYS LYS A . n D 4 73 ILE 73 73 73 ILE ILE A . n D 4 74 ASP 74 74 74 ASP ASP A . n D 4 75 GLU 75 75 75 GLU GLU A . n D 4 76 PHE 76 76 76 PHE PHE A . n D 4 77 LEU 77 77 77 LEU LEU A . n D 4 78 ALA 78 78 78 ALA ALA A . n D 4 79 THR 79 79 79 THR THR A . n D 4 80 GLY 80 80 80 GLY GLY A . n D 4 81 LYS 81 81 81 LYS LYS A . n D 4 82 LEU 82 82 82 LEU LEU A . n D 4 83 ARG 83 83 83 ARG ARG A . n D 4 84 LYS 84 84 84 LYS LYS A . n D 4 85 LEU 85 85 85 LEU LEU A . n D 4 86 GLU 86 86 86 GLU GLU A . n D 4 87 LYS 87 87 87 LYS LYS A . n D 4 88 ILE 88 88 88 ILE ILE A . n D 4 89 ARG 89 89 89 ARG ARG A . n D 4 90 GLN 90 90 90 GLN GLN A . n D 4 91 ASP 91 91 91 ASP ASP A . n D 4 92 ASP 92 92 92 ASP ASP A . n D 4 93 THR 93 93 93 THR THR A . n D 4 94 SER 94 94 94 SER SER A . n D 4 95 SER 95 95 95 SER SER A . n D 4 96 SER 96 96 96 SER SER A . n D 4 97 ILE 97 97 97 ILE ILE A . n D 4 98 ASN 98 98 98 ASN ASN A . n D 4 99 PHE 99 99 99 PHE PHE A . n D 4 100 LEU 100 100 100 LEU LEU A . n D 4 101 THR 101 101 101 THR THR A . n D 4 102 ARG 102 102 102 ARG ARG A . n D 4 103 VAL 103 103 103 VAL VAL A . n D 4 104 SER 104 104 104 SER SER A . n D 4 105 GLY 105 105 105 GLY GLY A . n D 4 106 ILE 106 106 106 ILE ILE A . n D 4 107 GLY 107 107 107 GLY GLY A . n D 4 108 PRO 108 108 108 PRO PRO A . n D 4 109 SER 109 109 109 SER SER A . n D 4 110 ALA 110 110 110 ALA ALA A . n D 4 111 ALA 111 111 111 ALA ALA A . n D 4 112 ARG 112 112 112 ARG ARG A . n D 4 113 LYS 113 113 113 LYS LYS A . n D 4 114 PHE 114 114 114 PHE PHE A . n D 4 115 VAL 115 115 115 VAL VAL A . n D 4 116 ASP 116 116 116 ASP ASP A . n D 4 117 GLU 117 117 117 GLU GLU A . n D 4 118 GLY 118 118 118 GLY GLY A . n D 4 119 ILE 119 119 119 ILE ILE A . n D 4 120 LYS 120 120 120 LYS LYS A . n D 4 121 THR 121 121 121 THR THR A . n D 4 122 LEU 122 122 122 LEU LEU A . n D 4 123 GLU 123 123 123 GLU GLU A . n D 4 124 ASP 124 124 124 ASP ASP A . n D 4 125 LEU 125 125 125 LEU LEU A . n D 4 126 ARG 126 126 126 ARG ARG A . n D 4 127 LYS 127 127 127 LYS LYS A . n D 4 128 ASN 128 128 128 ASN ASN A . n D 4 129 GLU 129 129 129 GLU GLU A . n D 4 130 ASP 130 130 130 ASP ASP A . n D 4 131 LYS 131 131 131 LYS LYS A . n D 4 132 LEU 132 132 132 LEU LEU A . n D 4 133 ASN 133 133 133 ASN ASN A . n D 4 134 HIS 134 134 134 HIS HIS A . n D 4 135 HIS 135 135 135 HIS HIS A . n D 4 136 GLN 136 136 136 GLN GLN A . n D 4 137 ARG 137 137 137 ARG ARG A . n D 4 138 ILE 138 138 138 ILE ILE A . n D 4 139 GLY 139 139 139 GLY GLY A . n D 4 140 LEU 140 140 140 LEU LEU A . n D 4 141 LYS 141 141 141 LYS LYS A . n D 4 142 TYR 142 142 142 TYR TYR A . n D 4 143 PHE 143 143 143 PHE PHE A . n D 4 144 GLY 144 144 144 GLY GLY A . n D 4 145 ASP 145 145 145 ASP ASP A . n D 4 146 PHE 146 146 146 PHE PHE A . n D 4 147 GLU 147 147 147 GLU GLU A . n D 4 148 LYS 148 148 148 LYS LYS A . n D 4 149 ARG 149 149 149 ARG ARG A . n D 4 150 ILE 150 150 150 ILE ILE A . n D 4 151 PRO 151 151 151 PRO PRO A . n D 4 152 ARG 152 152 152 ARG ARG A . n D 4 153 GLU 153 153 153 GLU GLU A . n D 4 154 GLU 154 154 154 GLU GLU A . n D 4 155 MET 155 155 155 MET MET A . n D 4 156 LEU 156 156 156 LEU LEU A . n D 4 157 GLN 157 157 157 GLN GLN A . n D 4 158 MET 158 158 158 MET MET A . n D 4 159 GLN 159 159 159 GLN GLN A . n D 4 160 ASP 160 160 160 ASP ASP A . n D 4 161 ILE 161 161 161 ILE ILE A . n D 4 162 VAL 162 162 162 VAL VAL A . n D 4 163 LEU 163 163 163 LEU LEU A . n D 4 164 ASN 164 164 164 ASN ASN A . n D 4 165 GLU 165 165 165 GLU GLU A . n D 4 166 VAL 166 166 166 VAL VAL A . n D 4 167 LYS 167 167 167 LYS LYS A . n D 4 168 LYS 168 168 168 LYS LYS A . n D 4 169 VAL 169 169 169 VAL VAL A . n D 4 170 ASP 170 170 170 ASP ASP A . n D 4 171 SER 171 171 171 SER SER A . n D 4 172 GLU 172 172 172 GLU GLU A . n D 4 173 TYR 173 173 173 TYR TYR A . n D 4 174 ILE 174 174 174 ILE ILE A . n D 4 175 ALA 175 175 175 ALA ALA A . n D 4 176 THR 176 176 176 THR THR A . n D 4 177 VAL 177 177 177 VAL VAL A . n D 4 178 CYS 178 178 178 CYS CYS A . n D 4 179 GLY 179 179 179 GLY GLY A . n D 4 180 SER 180 180 180 SER SER A . n D 4 181 PHE 181 181 181 PHE PHE A . n D 4 182 ARG 182 182 182 ARG ARG A . n D 4 183 ARG 183 183 183 ARG ARG A . n D 4 184 GLY 184 184 184 GLY GLY A . n D 4 185 ALA 185 185 185 ALA ALA A . n D 4 186 GLU 186 186 186 GLU GLU A . n D 4 187 SER 187 187 187 SER SER A . n D 4 188 SER 188 188 188 SER SER A . n D 4 189 GLY 189 189 189 GLY GLY A . n D 4 190 ASP 190 190 190 ASP ASP A . n D 4 191 MET 191 191 191 MET MET A . n D 4 192 ASP 192 192 192 ASP ASP A . n D 4 193 VAL 193 193 193 VAL VAL A . n D 4 194 LEU 194 194 194 LEU LEU A . n D 4 195 LEU 195 195 195 LEU LEU A . n D 4 196 THR 196 196 196 THR THR A . n D 4 197 HIS 197 197 197 HIS HIS A . n D 4 198 PRO 198 198 198 PRO PRO A . n D 4 199 SER 199 199 199 SER SER A . n D 4 200 PHE 200 200 200 PHE PHE A . n D 4 201 THR 201 201 201 THR THR A . n D 4 202 SER 202 202 202 SER SER A . n D 4 203 GLU 203 203 203 GLU GLU A . n D 4 204 SER 204 204 204 SER SER A . n D 4 205 THR 205 205 205 THR THR A . n D 4 206 LYS 206 206 206 LYS LYS A . n D 4 207 GLN 207 207 207 GLN GLN A . n D 4 208 PRO 208 208 208 PRO PRO A . n D 4 209 LYS 209 209 209 LYS LYS A . n D 4 210 LEU 210 210 210 LEU LEU A . n D 4 211 LEU 211 211 211 LEU LEU A . n D 4 212 HIS 212 212 212 HIS HIS A . n D 4 213 GLN 213 213 213 GLN GLN A . n D 4 214 VAL 214 214 214 VAL VAL A . n D 4 215 VAL 215 215 215 VAL VAL A . n D 4 216 GLU 216 216 216 GLU GLU A . n D 4 217 GLN 217 217 217 GLN GLN A . n D 4 218 LEU 218 218 218 LEU LEU A . n D 4 219 GLN 219 219 219 GLN GLN A . n D 4 220 LYS 220 220 220 LYS LYS A . n D 4 221 VAL 221 221 221 VAL VAL A . n D 4 222 HIS 222 222 222 HIS HIS A . n D 4 223 PHE 223 223 223 PHE PHE A . n D 4 224 ILE 224 224 224 ILE ILE A . n D 4 225 THR 225 225 225 THR THR A . n D 4 226 ASP 226 226 226 ASP ASP A . n D 4 227 THR 227 227 227 THR THR A . n D 4 228 LEU 228 228 228 LEU LEU A . n D 4 229 SER 229 229 229 SER SER A . n D 4 230 LYS 230 230 230 LYS LYS A . n D 4 231 GLY 231 231 231 GLY GLY A . n D 4 232 GLU 232 232 232 GLU GLU A . n D 4 233 THR 233 233 233 THR THR A . n D 4 234 LYS 234 234 234 LYS LYS A . n D 4 235 PHE 235 235 235 PHE PHE A . n D 4 236 MET 236 236 236 MET MET A . n D 4 237 GLY 237 237 237 GLY GLY A . n D 4 238 VAL 238 238 238 VAL VAL A . n D 4 239 CYS 239 239 239 CYS CYS A . n D 4 240 GLN 240 240 240 GLN GLN A . n D 4 241 LEU 241 241 241 LEU LEU A . n D 4 242 PRO 242 242 242 PRO PRO A . n D 4 243 SER 243 243 243 SER SER A . n D 4 244 LYS 244 244 244 LYS LYS A . n D 4 245 ASN 245 245 245 ASN ASN A . n D 4 246 ASP 246 246 246 ASP ASP A . n D 4 247 GLU 247 247 247 GLU GLU A . n D 4 248 LYS 248 248 248 LYS LYS A . n D 4 249 GLU 249 249 249 GLU GLU A . n D 4 250 TYR 250 250 250 TYR TYR A . n D 4 251 PRO 251 251 251 PRO PRO A . n D 4 252 HIS 252 252 252 HIS HIS A . n D 4 253 ARG 253 253 253 ARG ARG A . n D 4 254 ARG 254 254 254 ARG ARG A . n D 4 255 ILE 255 255 255 ILE ILE A . n D 4 256 ASP 256 256 256 ASP ASP A . n D 4 257 ILE 257 257 257 ILE ILE A . n D 4 258 ARG 258 258 258 ARG ARG A . n D 4 259 LEU 259 259 259 LEU LEU A . n D 4 260 ILE 260 260 260 ILE ILE A . n D 4 261 PRO 261 261 261 PRO PRO A . n D 4 262 LYS 262 262 262 LYS LYS A . n D 4 263 ASP 263 263 263 ASP ASP A . n D 4 264 GLN 264 264 264 GLN GLN A . n D 4 265 TYR 265 265 265 TYR TYR A . n D 4 266 TYR 266 266 266 TYR TYR A . n D 4 267 CYS 267 267 267 CYS CYS A . n D 4 268 GLY 268 268 268 GLY GLY A . n D 4 269 VAL 269 269 269 VAL VAL A . n D 4 270 LEU 270 270 270 LEU LEU A . n D 4 271 TYR 271 271 271 TYR TYR A . n D 4 272 PHE 272 272 272 PHE PHE A . n D 4 273 THR 273 273 273 THR THR A . n D 4 274 GLY 274 274 274 GLY GLY A . n D 4 275 SER 275 275 275 SER SER A . n D 4 276 ASP 276 276 276 ASP ASP A . n D 4 277 ILE 277 277 277 ILE ILE A . n D 4 278 PHE 278 278 278 PHE PHE A . n D 4 279 ASN 279 279 279 ASN ASN A . n D 4 280 LYS 280 280 280 LYS LYS A . n D 4 281 ASN 281 281 281 ASN ASN A . n D 4 282 MET 282 282 282 MET MET A . n D 4 283 ARG 283 283 283 ARG ARG A . n D 4 284 ALA 284 284 284 ALA ALA A . n D 4 285 HIS 285 285 285 HIS HIS A . n D 4 286 ALA 286 286 286 ALA ALA A . n D 4 287 LEU 287 287 287 LEU LEU A . n D 4 288 GLU 288 288 288 GLU GLU A . n D 4 289 LYS 289 289 289 LYS LYS A . n D 4 290 GLY 290 290 290 GLY GLY A . n D 4 291 PHE 291 291 291 PHE PHE A . n D 4 292 THR 292 292 292 THR THR A . n D 4 293 ILE 293 293 293 ILE ILE A . n D 4 294 ASN 294 294 294 ASN ASN A . n D 4 295 GLU 295 295 295 GLU GLU A . n D 4 296 TYR 296 296 296 TYR TYR A . n D 4 297 THR 297 297 297 THR THR A . n D 4 298 ILE 298 298 298 ILE ILE A . n D 4 299 ARG 299 299 299 ARG ARG A . n D 4 300 PRO 300 300 300 PRO PRO A . n D 4 301 LEU 301 301 301 LEU LEU A . n D 4 302 GLY 302 302 302 GLY GLY A . n D 4 303 VAL 303 303 303 VAL VAL A . n D 4 304 THR 304 304 304 THR THR A . n D 4 305 GLY 305 305 305 GLY GLY A . n D 4 306 VAL 306 306 306 VAL VAL A . n D 4 307 ALA 307 307 307 ALA ALA A . n D 4 308 GLY 308 308 308 GLY GLY A . n D 4 309 GLU 309 309 309 GLU GLU A . n D 4 310 PRO 310 310 310 PRO PRO A . n D 4 311 LEU 311 311 311 LEU LEU A . n D 4 312 PRO 312 312 312 PRO PRO A . n D 4 313 VAL 313 313 313 VAL VAL A . n D 4 314 ASP 314 314 314 ASP ASP A . n D 4 315 SER 315 315 315 SER SER A . n D 4 316 GLU 316 316 316 GLU GLU A . n D 4 317 LYS 317 317 317 LYS LYS A . n D 4 318 ASP 318 318 318 ASP ASP A . n D 4 319 ILE 319 319 319 ILE ILE A . n D 4 320 PHE 320 320 320 PHE PHE A . n D 4 321 ASP 321 321 321 ASP ASP A . n D 4 322 TYR 322 322 322 TYR TYR A . n D 4 323 ILE 323 323 323 ILE ILE A . n D 4 324 GLN 324 324 324 GLN GLN A . n D 4 325 TRP 325 325 325 TRP TRP A . n D 4 326 LYS 326 326 326 LYS LYS A . n D 4 327 TYR 327 327 327 TYR TYR A . n D 4 328 ARG 328 328 328 ARG ARG A . n D 4 329 GLU 329 329 329 GLU GLU A . n D 4 330 PRO 330 330 330 PRO PRO A . n D 4 331 LYS 331 331 331 LYS LYS A . n D 4 332 ASP 332 332 332 ASP ASP A . n D 4 333 ARG 333 333 333 ARG ARG A . n D 4 334 SER 334 334 334 SER SER A . n D 4 335 GLU 335 335 335 GLU GLU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 DA 1 338 338 DA A T . F 6 NA 1 341 341 NA NA A . G 6 NA 1 342 342 NA NA A . H 7 HOH 1 346 346 HOH HOH D . I 7 HOH 1 344 344 HOH HOH A . I 7 HOH 2 345 345 HOH HOH A . I 7 HOH 3 347 347 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 CNS refinement . ? 3 CNS phasing . ? 4 # _cell.entry_id 1MQ2 _cell.length_a 55.200 _cell.length_b 81.000 _cell.length_c 55.600 _cell.angle_alpha 90.00 _cell.angle_beta 106.10 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1MQ2 _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 # _exptl.entry_id 1MQ2 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 50.45 _exptl_crystal.density_Matthews 2.48 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 291.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details '20% PEG 3350, 350 mM sodium acetate, 50 mM imidazole at 18 degrees (C), pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 291.0K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.details 1 1 1 'PEG 3350' ? ? ? 1 2 1 'sodium acetate' ? ? ? 1 3 1 imidazole ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 200.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X9B' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X9B _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1MQ2 _reflns.number_all ? _reflns.number_obs 7613 _reflns.percent_possible_obs 81.4 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 3.10 _reflns.d_resolution_low 20 _reflns.pdbx_Rmerge_I_obs 0.119 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 9.7 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 2.3 _reflns.R_free_details ? _reflns.limit_k_min ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 3.10 _reflns_shell.d_res_low 3.21 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 71.7 _reflns_shell.Rmerge_I_obs 0.255 _reflns_shell.meanI_over_sigI_obs 3.3 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_redundancy ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1MQ2 _refine.ls_d_res_high 3.1 _refine.ls_d_res_low 20.0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 7060 _refine.ls_number_reflns_R_free 332 _refine.ls_percent_reflns_obs 81.8 _refine.ls_R_factor_all 0.26 _refine.ls_R_factor_obs 0.26 _refine.ls_R_factor_R_work 0.257 _refine.ls_R_factor_R_free 0.317 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free 4.7 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 1MQ3 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_details ? _refine.solvent_model_param_bsol 10.0 _refine.solvent_model_param_ksol .1840 _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_mean 43.2 _refine.aniso_B[1][1] -11.78 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -2.88 _refine.aniso_B[2][2] -11.54 _refine.aniso_B[2][3] 0.00 _refine.aniso_B[3][3] 23.33 _refine.details ;Used Maximum Likelihood on Intensities (MLI) target function. A MINIMAL AMOUNT OF REFINEMENT WAS PERFORMED BECAUSE THE DATA QUALITY IS POOR. ; _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2613 _refine_hist.pdbx_number_atoms_nucleic_acid 632 _refine_hist.pdbx_number_atoms_ligand 24 _refine_hist.number_atoms_solvent 4 _refine_hist.number_atoms_total 3273 _refine_hist.d_res_high 3.1 _refine_hist.d_res_low 20.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.004 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 0.8 ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.135 ? ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 1.210 ? ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 1.970 ? ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 1.979 ? ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 1MQ2 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1MQ2 _struct.title 'Human DNA Polymerase Beta Complexed With Gapped DNA Containing an 8-oxo-7,8-dihydro-Guanine and dAMP' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1MQ2 _struct_keywords.pdbx_keywords TRANSFERASE/DNA _struct_keywords.text 'TRANSFERASE, DNA, TRANSFERASE-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 6 ? H N N 7 ? I N N 7 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP DPOB_HUMAN 4 ;MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSE ; 1 P06746 ? 2 PDB 1MQ2 1 ? ? 1MQ2 ? 3 PDB 1MQ2 2 ? ? 1MQ2 ? 4 PDB 1MQ2 3 ? ? 1MQ2 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1MQ2 A 1 ? 335 ? P06746 1 ? 335 ? 1 335 2 2 1MQ2 T 1 ? 16 ? 1MQ2 1 ? 16 ? 1 16 3 3 1MQ2 P 1 ? 10 ? 1MQ2 1 ? 10 ? 1 10 4 4 1MQ2 D 1 ? 5 ? 1MQ2 1 ? 5 ? 1 5 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN D 12 ? VAL D 29 ? ASN A 12 VAL A 29 1 ? 18 HELX_P HELX_P2 2 ALA D 32 ? ALA D 47 ? ALA A 32 ALA A 47 1 ? 16 HELX_P HELX_P3 3 SER D 55 ? LYS D 61 ? SER A 55 LYS A 61 1 ? 7 HELX_P HELX_P4 4 GLY D 66 ? THR D 79 ? GLY A 66 THR A 79 1 ? 14 HELX_P HELX_P5 5 LEU D 82 ? ASP D 91 ? LEU A 82 ASP A 91 1 ? 10 HELX_P HELX_P6 6 ASP D 91 ? THR D 101 ? ASP A 91 THR A 101 1 ? 11 HELX_P HELX_P7 7 GLY D 107 ? GLU D 117 ? GLY A 107 GLU A 117 1 ? 11 HELX_P HELX_P8 8 THR D 121 ? ASN D 128 ? THR A 121 ASN A 128 1 ? 8 HELX_P HELX_P9 9 GLU D 129 ? LEU D 132 ? GLU A 129 LEU A 132 5 ? 4 HELX_P HELX_P10 10 ASN D 133 ? TYR D 142 ? ASN A 133 TYR A 142 1 ? 10 HELX_P HELX_P11 11 TYR D 142 ? LYS D 148 ? TYR A 142 LYS A 148 1 ? 7 HELX_P HELX_P12 12 PRO D 151 ? ASP D 170 ? PRO A 151 ASP A 170 1 ? 20 HELX_P HELX_P13 13 GLY D 179 ? ARG D 182 ? GLY A 179 ARG A 182 5 ? 4 HELX_P HELX_P14 14 LYS D 209 ? VAL D 221 ? LYS A 209 VAL A 221 1 ? 13 HELX_P HELX_P15 15 GLN D 264 ? GLY D 274 ? GLN A 264 GLY A 274 1 ? 11 HELX_P HELX_P16 16 SER D 275 ? GLY D 290 ? SER A 275 GLY A 290 1 ? 16 HELX_P HELX_P17 17 SER D 315 ? ASP D 321 ? SER A 315 ASP A 321 1 ? 7 HELX_P HELX_P18 18 GLU D 329 ? ARG D 333 ? GLU A 329 ARG A 333 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A DC 5 "O3'" ? ? ? 1_555 A 8OG 6 P ? ? T DC 5 T 8OG 6 1_555 ? ? ? ? ? ? ? 1.608 ? ? covale2 covale both ? A 8OG 6 "O3'" ? ? ? 1_555 A DT 7 P ? ? T 8OG 6 T DT 7 1_555 ? ? ? ? ? ? ? 1.609 ? ? covale3 covale both ? B DG 9 "O3'" ? ? ? 1_555 B 2DA 10 P ? ? P DG 9 P 2DA 10 1_555 ? ? ? ? ? ? ? 1.608 ? ? metalc1 metalc ? ? B DG 9 OP1 ? ? ? 1_555 F NA . NA ? ? P DG 9 A NA 341 1_555 ? ? ? ? ? ? ? 2.414 ? ? metalc2 metalc ? ? C DC 3 OP1 ? ? ? 1_555 G NA . NA ? ? D DC 3 A NA 342 1_555 ? ? ? ? ? ? ? 2.436 ? ? metalc3 metalc ? ? H HOH . O ? ? ? 1_555 G NA . NA ? ? D HOH 346 A NA 342 1_555 ? ? ? ? ? ? ? 2.361 ? ? metalc4 metalc ? ? D LYS 60 O ? ? ? 1_555 G NA . NA ? ? A LYS 60 A NA 342 1_555 ? ? ? ? ? ? ? 2.346 ? ? metalc5 metalc ? ? D LEU 62 O ? ? ? 1_555 G NA . NA ? ? A LEU 62 A NA 342 1_555 ? ? ? ? ? ? ? 2.630 ? ? metalc6 metalc ? ? D VAL 65 O ? ? ? 1_555 G NA . NA ? ? A VAL 65 A NA 342 1_555 ? ? ? ? ? ? ? 2.380 ? ? metalc7 metalc ? ? D THR 101 O ? ? ? 1_555 F NA . NA ? ? A THR 101 A NA 341 1_555 ? ? ? ? ? ? ? 2.036 ? ? metalc8 metalc ? ? D VAL 103 O ? ? ? 1_555 F NA . NA ? ? A VAL 103 A NA 341 1_555 ? ? ? ? ? ? ? 2.548 ? ? metalc9 metalc ? ? D ILE 106 O ? ? ? 1_555 F NA . NA ? ? A ILE 106 A NA 341 1_555 ? ? ? ? ? ? ? 2.330 ? ? metalc10 metalc ? ? F NA . NA ? ? ? 1_555 I HOH . O ? ? A NA 341 A HOH 344 1_555 ? ? ? ? ? ? ? 2.246 ? ? metalc11 metalc ? ? F NA . NA ? ? ? 1_555 I HOH . O ? ? A NA 341 A HOH 345 1_555 ? ? ? ? ? ? ? 2.679 ? ? metalc12 metalc ? ? G NA . NA ? ? ? 1_555 I HOH . O ? ? A NA 342 A HOH 347 1_555 ? ? ? ? ? ? ? 2.523 ? ? hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 C DG 5 N1 ? ? T DC 1 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 C DG 5 O6 ? ? T DC 1 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 C DG 5 N2 ? ? T DC 1 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 2 N3 ? ? ? 1_555 C DG 4 N1 ? ? T DC 2 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 2 N4 ? ? ? 1_555 C DG 4 O6 ? ? T DC 2 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 2 O2 ? ? ? 1_555 C DG 4 N2 ? ? T DC 2 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 3 N1 ? ? ? 1_555 C DC 3 N3 ? ? T DG 3 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 3 N2 ? ? ? 1_555 C DC 3 O2 ? ? T DG 3 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 3 O6 ? ? ? 1_555 C DC 3 N4 ? ? T DG 3 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DA 4 N1 ? ? ? 1_555 C DT 2 N3 ? ? T DA 4 D DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DA 4 N6 ? ? ? 1_555 C DT 2 O4 ? ? T DA 4 D DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DC 5 N3 ? ? ? 1_555 C DG 1 N1 ? ? T DC 5 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 5 N4 ? ? ? 1_555 C DG 1 O6 ? ? T DC 5 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 5 O2 ? ? ? 1_555 C DG 1 N2 ? ? T DC 5 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DT 7 N3 ? ? ? 1_555 B 2DA 10 N1 ? ? T DT 7 P 2DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DT 7 O4 ? ? ? 1_555 B 2DA 10 N6 ? ? T DT 7 P 2DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DC 8 N3 ? ? ? 1_555 B DG 9 N1 ? ? T DC 8 P DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DC 8 N4 ? ? ? 1_555 B DG 9 O6 ? ? T DC 8 P DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DC 8 O2 ? ? ? 1_555 B DG 9 N2 ? ? T DC 8 P DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DG 9 N1 ? ? ? 1_555 B DC 8 N3 ? ? T DG 9 P DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DG 9 N2 ? ? ? 1_555 B DC 8 O2 ? ? T DG 9 P DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DG 9 O6 ? ? ? 1_555 B DC 8 N4 ? ? T DG 9 P DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DC 10 N3 ? ? ? 1_555 B DG 7 N1 ? ? T DC 10 P DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DC 10 N4 ? ? ? 1_555 B DG 7 O6 ? ? T DC 10 P DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DC 10 O2 ? ? ? 1_555 B DG 7 N2 ? ? T DC 10 P DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DA 11 N1 ? ? ? 1_555 B DT 6 N3 ? ? T DA 11 P DT 6 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog27 hydrog ? ? A DT 12 N3 ? ? ? 1_555 B DA 5 N1 ? ? T DT 12 P DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DT 12 O4 ? ? ? 1_555 B DA 5 N6 ? ? T DT 12 P DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DC 13 N3 ? ? ? 1_555 B DG 4 N1 ? ? T DC 13 P DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DC 13 N4 ? ? ? 1_555 B DG 4 O6 ? ? T DC 13 P DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DC 13 O2 ? ? ? 1_555 B DG 4 N2 ? ? T DC 13 P DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DA 14 N1 ? ? ? 1_555 B DT 3 N3 ? ? T DA 14 P DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DA 14 N6 ? ? ? 1_555 B DT 3 O4 ? ? T DA 14 P DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DG 15 N1 ? ? ? 1_555 B DC 2 N3 ? ? T DG 15 P DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A DG 15 N2 ? ? ? 1_555 B DC 2 O2 ? ? T DG 15 P DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DG 15 O6 ? ? ? 1_555 B DC 2 N4 ? ? T DG 15 P DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A DC 16 N3 ? ? ? 1_555 B DG 1 N1 ? ? T DC 16 P DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A DC 16 N4 ? ? ? 1_555 B DG 1 O6 ? ? T DC 16 P DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A DC 16 O2 ? ? ? 1_555 B DG 1 N2 ? ? T DC 16 P DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OP1 ? B DG 9 ? P DG 9 ? 1_555 NA ? F NA . ? A NA 341 ? 1_555 O ? D THR 101 ? A THR 101 ? 1_555 166.4 ? 2 OP1 ? B DG 9 ? P DG 9 ? 1_555 NA ? F NA . ? A NA 341 ? 1_555 O ? D VAL 103 ? A VAL 103 ? 1_555 95.9 ? 3 O ? D THR 101 ? A THR 101 ? 1_555 NA ? F NA . ? A NA 341 ? 1_555 O ? D VAL 103 ? A VAL 103 ? 1_555 91.4 ? 4 OP1 ? B DG 9 ? P DG 9 ? 1_555 NA ? F NA . ? A NA 341 ? 1_555 O ? D ILE 106 ? A ILE 106 ? 1_555 95.2 ? 5 O ? D THR 101 ? A THR 101 ? 1_555 NA ? F NA . ? A NA 341 ? 1_555 O ? D ILE 106 ? A ILE 106 ? 1_555 96.6 ? 6 O ? D VAL 103 ? A VAL 103 ? 1_555 NA ? F NA . ? A NA 341 ? 1_555 O ? D ILE 106 ? A ILE 106 ? 1_555 87.5 ? 7 OP1 ? B DG 9 ? P DG 9 ? 1_555 NA ? F NA . ? A NA 341 ? 1_555 O ? I HOH . ? A HOH 344 ? 1_555 91.0 ? 8 O ? D THR 101 ? A THR 101 ? 1_555 NA ? F NA . ? A NA 341 ? 1_555 O ? I HOH . ? A HOH 344 ? 1_555 82.6 ? 9 O ? D VAL 103 ? A VAL 103 ? 1_555 NA ? F NA . ? A NA 341 ? 1_555 O ? I HOH . ? A HOH 344 ? 1_555 172.1 ? 10 O ? D ILE 106 ? A ILE 106 ? 1_555 NA ? F NA . ? A NA 341 ? 1_555 O ? I HOH . ? A HOH 344 ? 1_555 88.1 ? 11 OP1 ? B DG 9 ? P DG 9 ? 1_555 NA ? F NA . ? A NA 341 ? 1_555 O ? I HOH . ? A HOH 345 ? 1_555 82.4 ? 12 O ? D THR 101 ? A THR 101 ? 1_555 NA ? F NA . ? A NA 341 ? 1_555 O ? I HOH . ? A HOH 345 ? 1_555 85.8 ? 13 O ? D VAL 103 ? A VAL 103 ? 1_555 NA ? F NA . ? A NA 341 ? 1_555 O ? I HOH . ? A HOH 345 ? 1_555 92.6 ? 14 O ? D ILE 106 ? A ILE 106 ? 1_555 NA ? F NA . ? A NA 341 ? 1_555 O ? I HOH . ? A HOH 345 ? 1_555 177.5 ? 15 O ? I HOH . ? A HOH 344 ? 1_555 NA ? F NA . ? A NA 341 ? 1_555 O ? I HOH . ? A HOH 345 ? 1_555 92.0 ? 16 OP1 ? C DC 3 ? D DC 3 ? 1_555 NA ? G NA . ? A NA 342 ? 1_555 O ? H HOH . ? D HOH 346 ? 1_555 85.4 ? 17 OP1 ? C DC 3 ? D DC 3 ? 1_555 NA ? G NA . ? A NA 342 ? 1_555 O ? D LYS 60 ? A LYS 60 ? 1_555 174.2 ? 18 O ? H HOH . ? D HOH 346 ? 1_555 NA ? G NA . ? A NA 342 ? 1_555 O ? D LYS 60 ? A LYS 60 ? 1_555 92.4 ? 19 OP1 ? C DC 3 ? D DC 3 ? 1_555 NA ? G NA . ? A NA 342 ? 1_555 O ? D LEU 62 ? A LEU 62 ? 1_555 100.5 ? 20 O ? H HOH . ? D HOH 346 ? 1_555 NA ? G NA . ? A NA 342 ? 1_555 O ? D LEU 62 ? A LEU 62 ? 1_555 172.5 ? 21 O ? D LYS 60 ? A LYS 60 ? 1_555 NA ? G NA . ? A NA 342 ? 1_555 O ? D LEU 62 ? A LEU 62 ? 1_555 82.1 ? 22 OP1 ? C DC 3 ? D DC 3 ? 1_555 NA ? G NA . ? A NA 342 ? 1_555 O ? D VAL 65 ? A VAL 65 ? 1_555 85.9 ? 23 O ? H HOH . ? D HOH 346 ? 1_555 NA ? G NA . ? A NA 342 ? 1_555 O ? D VAL 65 ? A VAL 65 ? 1_555 89.0 ? 24 O ? D LYS 60 ? A LYS 60 ? 1_555 NA ? G NA . ? A NA 342 ? 1_555 O ? D VAL 65 ? A VAL 65 ? 1_555 88.6 ? 25 O ? D LEU 62 ? A LEU 62 ? 1_555 NA ? G NA . ? A NA 342 ? 1_555 O ? D VAL 65 ? A VAL 65 ? 1_555 96.0 ? 26 OP1 ? C DC 3 ? D DC 3 ? 1_555 NA ? G NA . ? A NA 342 ? 1_555 O ? I HOH . ? A HOH 347 ? 1_555 93.0 ? 27 O ? H HOH . ? D HOH 346 ? 1_555 NA ? G NA . ? A NA 342 ? 1_555 O ? I HOH . ? A HOH 347 ? 1_555 89.5 ? 28 O ? D LYS 60 ? A LYS 60 ? 1_555 NA ? G NA . ? A NA 342 ? 1_555 O ? I HOH . ? A HOH 347 ? 1_555 92.4 ? 29 O ? D LEU 62 ? A LEU 62 ? 1_555 NA ? G NA . ? A NA 342 ? 1_555 O ? I HOH . ? A HOH 347 ? 1_555 85.6 ? 30 O ? D VAL 65 ? A VAL 65 ? 1_555 NA ? G NA . ? A NA 342 ? 1_555 O ? I HOH . ? A HOH 347 ? 1_555 178.2 ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLY _struct_mon_prot_cis.label_seq_id 274 _struct_mon_prot_cis.label_asym_id D _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLY _struct_mon_prot_cis.auth_seq_id 274 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 SER _struct_mon_prot_cis.pdbx_label_seq_id_2 275 _struct_mon_prot_cis.pdbx_label_asym_id_2 D _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 SER _struct_mon_prot_cis.pdbx_auth_seq_id_2 275 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -0.02 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE D 174 ? VAL D 177 ? ILE A 174 VAL A 177 A 2 MET D 191 ? THR D 196 ? MET A 191 THR A 196 A 3 ARG D 253 ? LEU D 259 ? ARG A 253 LEU A 259 A 4 LYS D 234 ? CYS D 239 ? LYS A 234 CYS A 239 A 5 ILE D 224 ? LYS D 230 ? ILE A 224 LYS A 230 B 1 PHE D 291 ? ILE D 293 ? PHE A 291 ILE A 293 B 2 ILE D 298 ? PRO D 300 ? ILE A 298 PRO A 300 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N THR D 176 ? N THR A 176 O LEU D 194 ? O LEU A 194 A 2 3 N VAL D 193 ? N VAL A 193 O ASP D 256 ? O ASP A 256 A 3 4 O ARG D 253 ? O ARG A 253 N CYS D 239 ? N CYS A 239 A 4 5 O MET D 236 ? O MET A 236 N SER D 229 ? N SER A 229 B 1 2 N THR D 292 ? N THR A 292 O ARG D 299 ? O ARG A 299 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A NA 341 ? 6 'BINDING SITE FOR RESIDUE NA A 341' AC2 Software A NA 342 ? 6 'BINDING SITE FOR RESIDUE NA A 342' AC3 Software T DA 338 ? 3 'BINDING SITE FOR RESIDUE DA T 338' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 THR D 101 ? THR A 101 . ? 1_555 ? 2 AC1 6 VAL D 103 ? VAL A 103 . ? 1_555 ? 3 AC1 6 ILE D 106 ? ILE A 106 . ? 1_555 ? 4 AC1 6 HOH I . ? HOH A 344 . ? 1_555 ? 5 AC1 6 HOH I . ? HOH A 345 . ? 1_555 ? 6 AC1 6 DG B 9 ? DG P 9 . ? 1_555 ? 7 AC2 6 LYS D 60 ? LYS A 60 . ? 1_555 ? 8 AC2 6 LEU D 62 ? LEU A 62 . ? 1_555 ? 9 AC2 6 VAL D 65 ? VAL A 65 . ? 1_555 ? 10 AC2 6 HOH I . ? HOH A 347 . ? 1_555 ? 11 AC2 6 DC C 3 ? DC D 3 . ? 1_555 ? 12 AC2 6 HOH H . ? HOH D 346 . ? 1_555 ? 13 AC3 3 ASP D 276 ? ASP A 276 . ? 1_555 ? 14 AC3 3 2DA B 10 ? 2DA P 10 . ? 1_555 ? 15 AC3 3 8OG A 6 ? 8OG T 6 . ? 1_555 ? # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 P _pdbx_validate_rmsd_bond.auth_asym_id_1 D _pdbx_validate_rmsd_bond.auth_comp_id_1 DG _pdbx_validate_rmsd_bond.auth_seq_id_1 1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 OP3 _pdbx_validate_rmsd_bond.auth_asym_id_2 D _pdbx_validate_rmsd_bond.auth_comp_id_2 DG _pdbx_validate_rmsd_bond.auth_seq_id_2 1 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.520 _pdbx_validate_rmsd_bond.bond_target_value 1.607 _pdbx_validate_rmsd_bond.bond_deviation -0.087 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.012 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 11 ? ? -74.62 -74.50 2 1 LYS A 81 ? ? -171.75 -178.37 3 1 ASN A 128 ? ? -96.42 42.22 4 1 ASP A 170 ? ? -173.09 125.33 5 1 CYS A 178 ? ? -91.33 -158.61 6 1 SER A 188 ? ? -158.46 -64.02 7 1 ASP A 190 ? ? -170.48 135.18 8 1 SER A 202 ? ? 43.22 -85.01 9 1 THR A 225 ? ? -95.03 -60.56 10 1 ASP A 246 ? ? 68.31 -56.98 11 1 TYR A 265 ? ? -66.84 -71.85 12 1 ASN A 294 ? ? -140.66 35.20 13 1 GLU A 295 ? ? 68.87 -45.72 14 1 ASP A 321 ? ? -85.44 44.59 15 1 TYR A 322 ? ? -146.12 -45.01 16 1 ARG A 333 ? ? -78.38 22.65 # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A 8OG 6 T 8OG 6 ? DG ? 2 B 2DA 10 P 2DA 10 ? DA "2',3'-DIDEOXYADENOSINE-5'-MONOPHOSPHATE" # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? D MET 1 2 1 Y 1 A SER 2 ? D SER 2 3 1 Y 1 A LYS 3 ? D LYS 3 4 1 Y 1 A ARG 4 ? D ARG 4 5 1 Y 1 A LYS 5 ? D LYS 5 6 1 Y 1 A ALA 6 ? D ALA 6 7 1 Y 1 A PRO 7 ? D PRO 7 8 1 Y 1 A GLN 8 ? D GLN 8 9 1 Y 1 A GLU 9 ? D GLU 9 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 2DA P P N N 1 2DA OP1 O N N 2 2DA OP2 O N N 3 2DA OP3 O N N 4 2DA "O5'" O N N 5 2DA "C5'" C N N 6 2DA "C4'" C N S 7 2DA "O4'" O N N 8 2DA "C3'" C N N 9 2DA "C2'" C N N 10 2DA "C1'" C N R 11 2DA N9 N Y N 12 2DA C8 C Y N 13 2DA N7 N Y N 14 2DA C5 C Y N 15 2DA C6 C Y N 16 2DA N6 N N N 17 2DA N1 N Y N 18 2DA C2 C Y N 19 2DA N3 N Y N 20 2DA C4 C Y N 21 2DA HOP2 H N N 22 2DA HOP3 H N N 23 2DA "H5'" H N N 24 2DA "H5''" H N N 25 2DA "H4'" H N N 26 2DA "H3'1" H N N 27 2DA "H3'2" H N N 28 2DA "H2'" H N N 29 2DA "H2''" H N N 30 2DA "H1'" H N N 31 2DA H8 H N N 32 2DA HN61 H N N 33 2DA HN62 H N N 34 2DA H2 H N N 35 8OG OP3 O N N 36 8OG P P N N 37 8OG OP1 O N N 38 8OG OP2 O N N 39 8OG "O5'" O N N 40 8OG "C5'" C N N 41 8OG "C4'" C N R 42 8OG "O4'" O N N 43 8OG "C3'" C N S 44 8OG "O3'" O N N 45 8OG "C2'" C N N 46 8OG "C1'" C N R 47 8OG N9 N N N 48 8OG C8 C N N 49 8OG N7 N N N 50 8OG C5 C N N 51 8OG C6 C N N 52 8OG O6 O N N 53 8OG N1 N N N 54 8OG C2 C N N 55 8OG N2 N N N 56 8OG N3 N N N 57 8OG C4 C N N 58 8OG O8 O N N 59 8OG HOP3 H N N 60 8OG HOP2 H N N 61 8OG "H5'" H N N 62 8OG "H5''" H N N 63 8OG "H4'" H N N 64 8OG "H3'" H N N 65 8OG "HO3'" H N N 66 8OG "H2'" H N N 67 8OG "H2''" H N N 68 8OG "H1'" H N N 69 8OG H7 H N N 70 8OG H1 H N N 71 8OG H21 H N N 72 8OG H22 H N N 73 ALA N N N N 74 ALA CA C N S 75 ALA C C N N 76 ALA O O N N 77 ALA CB C N N 78 ALA OXT O N N 79 ALA H H N N 80 ALA H2 H N N 81 ALA HA H N N 82 ALA HB1 H N N 83 ALA HB2 H N N 84 ALA HB3 H N N 85 ALA HXT H N N 86 ARG N N N N 87 ARG CA C N S 88 ARG C C N N 89 ARG O O N N 90 ARG CB C N N 91 ARG CG C N N 92 ARG CD C N N 93 ARG NE N N N 94 ARG CZ C N N 95 ARG NH1 N N N 96 ARG NH2 N N N 97 ARG OXT O N N 98 ARG H H N N 99 ARG H2 H N N 100 ARG HA H N N 101 ARG HB2 H N N 102 ARG HB3 H N N 103 ARG HG2 H N N 104 ARG HG3 H N N 105 ARG HD2 H N N 106 ARG HD3 H N N 107 ARG HE H N N 108 ARG HH11 H N N 109 ARG HH12 H N N 110 ARG HH21 H N N 111 ARG HH22 H N N 112 ARG HXT H N N 113 ASN N N N N 114 ASN CA C N S 115 ASN C C N N 116 ASN O O N N 117 ASN CB C N N 118 ASN CG C N N 119 ASN OD1 O N N 120 ASN ND2 N N N 121 ASN OXT O N N 122 ASN H H N N 123 ASN H2 H N N 124 ASN HA H N N 125 ASN HB2 H N N 126 ASN HB3 H N N 127 ASN HD21 H N N 128 ASN HD22 H N N 129 ASN HXT H N N 130 ASP N N N N 131 ASP CA C N S 132 ASP C C N N 133 ASP O O N N 134 ASP CB C N N 135 ASP CG C N N 136 ASP OD1 O N N 137 ASP OD2 O N N 138 ASP OXT O N N 139 ASP H H N N 140 ASP H2 H N N 141 ASP HA H N N 142 ASP HB2 H N N 143 ASP HB3 H N N 144 ASP HD2 H N N 145 ASP HXT H N N 146 CYS N N N N 147 CYS CA C N R 148 CYS C C N N 149 CYS O O N N 150 CYS CB C N N 151 CYS SG S N N 152 CYS OXT O N N 153 CYS H H N N 154 CYS H2 H N N 155 CYS HA H N N 156 CYS HB2 H N N 157 CYS HB3 H N N 158 CYS HG H N N 159 CYS HXT H N N 160 DA OP3 O N N 161 DA P P N N 162 DA OP1 O N N 163 DA OP2 O N N 164 DA "O5'" O N N 165 DA "C5'" C N N 166 DA "C4'" C N R 167 DA "O4'" O N N 168 DA "C3'" C N S 169 DA "O3'" O N N 170 DA "C2'" C N N 171 DA "C1'" C N R 172 DA N9 N Y N 173 DA C8 C Y N 174 DA N7 N Y N 175 DA C5 C Y N 176 DA C6 C Y N 177 DA N6 N N N 178 DA N1 N Y N 179 DA C2 C Y N 180 DA N3 N Y N 181 DA C4 C Y N 182 DA HOP3 H N N 183 DA HOP2 H N N 184 DA "H5'" H N N 185 DA "H5''" H N N 186 DA "H4'" H N N 187 DA "H3'" H N N 188 DA "HO3'" H N N 189 DA "H2'" H N N 190 DA "H2''" H N N 191 DA "H1'" H N N 192 DA H8 H N N 193 DA H61 H N N 194 DA H62 H N N 195 DA H2 H N N 196 DC OP3 O N N 197 DC P P N N 198 DC OP1 O N N 199 DC OP2 O N N 200 DC "O5'" O N N 201 DC "C5'" C N N 202 DC "C4'" C N R 203 DC "O4'" O N N 204 DC "C3'" C N S 205 DC "O3'" O N N 206 DC "C2'" C N N 207 DC "C1'" C N R 208 DC N1 N N N 209 DC C2 C N N 210 DC O2 O N N 211 DC N3 N N N 212 DC C4 C N N 213 DC N4 N N N 214 DC C5 C N N 215 DC C6 C N N 216 DC HOP3 H N N 217 DC HOP2 H N N 218 DC "H5'" H N N 219 DC "H5''" H N N 220 DC "H4'" H N N 221 DC "H3'" H N N 222 DC "HO3'" H N N 223 DC "H2'" H N N 224 DC "H2''" H N N 225 DC "H1'" H N N 226 DC H41 H N N 227 DC H42 H N N 228 DC H5 H N N 229 DC H6 H N N 230 DG OP3 O N N 231 DG P P N N 232 DG OP1 O N N 233 DG OP2 O N N 234 DG "O5'" O N N 235 DG "C5'" C N N 236 DG "C4'" C N R 237 DG "O4'" O N N 238 DG "C3'" C N S 239 DG "O3'" O N N 240 DG "C2'" C N N 241 DG "C1'" C N R 242 DG N9 N Y N 243 DG C8 C Y N 244 DG N7 N Y N 245 DG C5 C Y N 246 DG C6 C N N 247 DG O6 O N N 248 DG N1 N N N 249 DG C2 C N N 250 DG N2 N N N 251 DG N3 N N N 252 DG C4 C Y N 253 DG HOP3 H N N 254 DG HOP2 H N N 255 DG "H5'" H N N 256 DG "H5''" H N N 257 DG "H4'" H N N 258 DG "H3'" H N N 259 DG "HO3'" H N N 260 DG "H2'" H N N 261 DG "H2''" H N N 262 DG "H1'" H N N 263 DG H8 H N N 264 DG H1 H N N 265 DG H21 H N N 266 DG H22 H N N 267 DT OP3 O N N 268 DT P P N N 269 DT OP1 O N N 270 DT OP2 O N N 271 DT "O5'" O N N 272 DT "C5'" C N N 273 DT "C4'" C N R 274 DT "O4'" O N N 275 DT "C3'" C N S 276 DT "O3'" O N N 277 DT "C2'" C N N 278 DT "C1'" C N R 279 DT N1 N N N 280 DT C2 C N N 281 DT O2 O N N 282 DT N3 N N N 283 DT C4 C N N 284 DT O4 O N N 285 DT C5 C N N 286 DT C7 C N N 287 DT C6 C N N 288 DT HOP3 H N N 289 DT HOP2 H N N 290 DT "H5'" H N N 291 DT "H5''" H N N 292 DT "H4'" H N N 293 DT "H3'" H N N 294 DT "HO3'" H N N 295 DT "H2'" H N N 296 DT "H2''" H N N 297 DT "H1'" H N N 298 DT H3 H N N 299 DT H71 H N N 300 DT H72 H N N 301 DT H73 H N N 302 DT H6 H N N 303 GLN N N N N 304 GLN CA C N S 305 GLN C C N N 306 GLN O O N N 307 GLN CB C N N 308 GLN CG C N N 309 GLN CD C N N 310 GLN OE1 O N N 311 GLN NE2 N N N 312 GLN OXT O N N 313 GLN H H N N 314 GLN H2 H N N 315 GLN HA H N N 316 GLN HB2 H N N 317 GLN HB3 H N N 318 GLN HG2 H N N 319 GLN HG3 H N N 320 GLN HE21 H N N 321 GLN HE22 H N N 322 GLN HXT H N N 323 GLU N N N N 324 GLU CA C N S 325 GLU C C N N 326 GLU O O N N 327 GLU CB C N N 328 GLU CG C N N 329 GLU CD C N N 330 GLU OE1 O N N 331 GLU OE2 O N N 332 GLU OXT O N N 333 GLU H H N N 334 GLU H2 H N N 335 GLU HA H N N 336 GLU HB2 H N N 337 GLU HB3 H N N 338 GLU HG2 H N N 339 GLU HG3 H N N 340 GLU HE2 H N N 341 GLU HXT H N N 342 GLY N N N N 343 GLY CA C N N 344 GLY C C N N 345 GLY O O N N 346 GLY OXT O N N 347 GLY H H N N 348 GLY H2 H N N 349 GLY HA2 H N N 350 GLY HA3 H N N 351 GLY HXT H N N 352 HIS N N N N 353 HIS CA C N S 354 HIS C C N N 355 HIS O O N N 356 HIS CB C N N 357 HIS CG C Y N 358 HIS ND1 N Y N 359 HIS CD2 C Y N 360 HIS CE1 C Y N 361 HIS NE2 N Y N 362 HIS OXT O N N 363 HIS H H N N 364 HIS H2 H N N 365 HIS HA H N N 366 HIS HB2 H N N 367 HIS HB3 H N N 368 HIS HD1 H N N 369 HIS HD2 H N N 370 HIS HE1 H N N 371 HIS HE2 H N N 372 HIS HXT H N N 373 HOH O O N N 374 HOH H1 H N N 375 HOH H2 H N N 376 ILE N N N N 377 ILE CA C N S 378 ILE C C N N 379 ILE O O N N 380 ILE CB C N S 381 ILE CG1 C N N 382 ILE CG2 C N N 383 ILE CD1 C N N 384 ILE OXT O N N 385 ILE H H N N 386 ILE H2 H N N 387 ILE HA H N N 388 ILE HB H N N 389 ILE HG12 H N N 390 ILE HG13 H N N 391 ILE HG21 H N N 392 ILE HG22 H N N 393 ILE HG23 H N N 394 ILE HD11 H N N 395 ILE HD12 H N N 396 ILE HD13 H N N 397 ILE HXT H N N 398 LEU N N N N 399 LEU CA C N S 400 LEU C C N N 401 LEU O O N N 402 LEU CB C N N 403 LEU CG C N N 404 LEU CD1 C N N 405 LEU CD2 C N N 406 LEU OXT O N N 407 LEU H H N N 408 LEU H2 H N N 409 LEU HA H N N 410 LEU HB2 H N N 411 LEU HB3 H N N 412 LEU HG H N N 413 LEU HD11 H N N 414 LEU HD12 H N N 415 LEU HD13 H N N 416 LEU HD21 H N N 417 LEU HD22 H N N 418 LEU HD23 H N N 419 LEU HXT H N N 420 LYS N N N N 421 LYS CA C N S 422 LYS C C N N 423 LYS O O N N 424 LYS CB C N N 425 LYS CG C N N 426 LYS CD C N N 427 LYS CE C N N 428 LYS NZ N N N 429 LYS OXT O N N 430 LYS H H N N 431 LYS H2 H N N 432 LYS HA H N N 433 LYS HB2 H N N 434 LYS HB3 H N N 435 LYS HG2 H N N 436 LYS HG3 H N N 437 LYS HD2 H N N 438 LYS HD3 H N N 439 LYS HE2 H N N 440 LYS HE3 H N N 441 LYS HZ1 H N N 442 LYS HZ2 H N N 443 LYS HZ3 H N N 444 LYS HXT H N N 445 MET N N N N 446 MET CA C N S 447 MET C C N N 448 MET O O N N 449 MET CB C N N 450 MET CG C N N 451 MET SD S N N 452 MET CE C N N 453 MET OXT O N N 454 MET H H N N 455 MET H2 H N N 456 MET HA H N N 457 MET HB2 H N N 458 MET HB3 H N N 459 MET HG2 H N N 460 MET HG3 H N N 461 MET HE1 H N N 462 MET HE2 H N N 463 MET HE3 H N N 464 MET HXT H N N 465 NA NA NA N N 466 PHE N N N N 467 PHE CA C N S 468 PHE C C N N 469 PHE O O N N 470 PHE CB C N N 471 PHE CG C Y N 472 PHE CD1 C Y N 473 PHE CD2 C Y N 474 PHE CE1 C Y N 475 PHE CE2 C Y N 476 PHE CZ C Y N 477 PHE OXT O N N 478 PHE H H N N 479 PHE H2 H N N 480 PHE HA H N N 481 PHE HB2 H N N 482 PHE HB3 H N N 483 PHE HD1 H N N 484 PHE HD2 H N N 485 PHE HE1 H N N 486 PHE HE2 H N N 487 PHE HZ H N N 488 PHE HXT H N N 489 PRO N N N N 490 PRO CA C N S 491 PRO C C N N 492 PRO O O N N 493 PRO CB C N N 494 PRO CG C N N 495 PRO CD C N N 496 PRO OXT O N N 497 PRO H H N N 498 PRO HA H N N 499 PRO HB2 H N N 500 PRO HB3 H N N 501 PRO HG2 H N N 502 PRO HG3 H N N 503 PRO HD2 H N N 504 PRO HD3 H N N 505 PRO HXT H N N 506 SER N N N N 507 SER CA C N S 508 SER C C N N 509 SER O O N N 510 SER CB C N N 511 SER OG O N N 512 SER OXT O N N 513 SER H H N N 514 SER H2 H N N 515 SER HA H N N 516 SER HB2 H N N 517 SER HB3 H N N 518 SER HG H N N 519 SER HXT H N N 520 THR N N N N 521 THR CA C N S 522 THR C C N N 523 THR O O N N 524 THR CB C N R 525 THR OG1 O N N 526 THR CG2 C N N 527 THR OXT O N N 528 THR H H N N 529 THR H2 H N N 530 THR HA H N N 531 THR HB H N N 532 THR HG1 H N N 533 THR HG21 H N N 534 THR HG22 H N N 535 THR HG23 H N N 536 THR HXT H N N 537 TRP N N N N 538 TRP CA C N S 539 TRP C C N N 540 TRP O O N N 541 TRP CB C N N 542 TRP CG C Y N 543 TRP CD1 C Y N 544 TRP CD2 C Y N 545 TRP NE1 N Y N 546 TRP CE2 C Y N 547 TRP CE3 C Y N 548 TRP CZ2 C Y N 549 TRP CZ3 C Y N 550 TRP CH2 C Y N 551 TRP OXT O N N 552 TRP H H N N 553 TRP H2 H N N 554 TRP HA H N N 555 TRP HB2 H N N 556 TRP HB3 H N N 557 TRP HD1 H N N 558 TRP HE1 H N N 559 TRP HE3 H N N 560 TRP HZ2 H N N 561 TRP HZ3 H N N 562 TRP HH2 H N N 563 TRP HXT H N N 564 TYR N N N N 565 TYR CA C N S 566 TYR C C N N 567 TYR O O N N 568 TYR CB C N N 569 TYR CG C Y N 570 TYR CD1 C Y N 571 TYR CD2 C Y N 572 TYR CE1 C Y N 573 TYR CE2 C Y N 574 TYR CZ C Y N 575 TYR OH O N N 576 TYR OXT O N N 577 TYR H H N N 578 TYR H2 H N N 579 TYR HA H N N 580 TYR HB2 H N N 581 TYR HB3 H N N 582 TYR HD1 H N N 583 TYR HD2 H N N 584 TYR HE1 H N N 585 TYR HE2 H N N 586 TYR HH H N N 587 TYR HXT H N N 588 VAL N N N N 589 VAL CA C N S 590 VAL C C N N 591 VAL O O N N 592 VAL CB C N N 593 VAL CG1 C N N 594 VAL CG2 C N N 595 VAL OXT O N N 596 VAL H H N N 597 VAL H2 H N N 598 VAL HA H N N 599 VAL HB H N N 600 VAL HG11 H N N 601 VAL HG12 H N N 602 VAL HG13 H N N 603 VAL HG21 H N N 604 VAL HG22 H N N 605 VAL HG23 H N N 606 VAL HXT H N N 607 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 2DA P OP1 doub N N 1 2DA P OP2 sing N N 2 2DA P OP3 sing N N 3 2DA P "O5'" sing N N 4 2DA OP2 HOP2 sing N N 5 2DA OP3 HOP3 sing N N 6 2DA "O5'" "C5'" sing N N 7 2DA "C5'" "C4'" sing N N 8 2DA "C5'" "H5'" sing N N 9 2DA "C5'" "H5''" sing N N 10 2DA "C4'" "O4'" sing N N 11 2DA "C4'" "C3'" sing N N 12 2DA "C4'" "H4'" sing N N 13 2DA "O4'" "C1'" sing N N 14 2DA "C3'" "C2'" sing N N 15 2DA "C3'" "H3'1" sing N N 16 2DA "C3'" "H3'2" sing N N 17 2DA "C2'" "C1'" sing N N 18 2DA "C2'" "H2'" sing N N 19 2DA "C2'" "H2''" sing N N 20 2DA "C1'" N9 sing N N 21 2DA "C1'" "H1'" sing N N 22 2DA N9 C8 sing Y N 23 2DA N9 C4 sing Y N 24 2DA C8 N7 doub Y N 25 2DA C8 H8 sing N N 26 2DA N7 C5 sing Y N 27 2DA C5 C6 sing Y N 28 2DA C5 C4 doub Y N 29 2DA C6 N6 sing N N 30 2DA C6 N1 doub Y N 31 2DA N6 HN61 sing N N 32 2DA N6 HN62 sing N N 33 2DA N1 C2 sing Y N 34 2DA C2 N3 doub Y N 35 2DA C2 H2 sing N N 36 2DA N3 C4 sing Y N 37 8OG OP3 P sing N N 38 8OG OP3 HOP3 sing N N 39 8OG P OP1 doub N N 40 8OG P OP2 sing N N 41 8OG P "O5'" sing N N 42 8OG OP2 HOP2 sing N N 43 8OG "O5'" "C5'" sing N N 44 8OG "C5'" "C4'" sing N N 45 8OG "C5'" "H5'" sing N N 46 8OG "C5'" "H5''" sing N N 47 8OG "C4'" "O4'" sing N N 48 8OG "C4'" "C3'" sing N N 49 8OG "C4'" "H4'" sing N N 50 8OG "O4'" "C1'" sing N N 51 8OG "C3'" "O3'" sing N N 52 8OG "C3'" "C2'" sing N N 53 8OG "C3'" "H3'" sing N N 54 8OG "O3'" "HO3'" sing N N 55 8OG "C2'" "C1'" sing N N 56 8OG "C2'" "H2'" sing N N 57 8OG "C2'" "H2''" sing N N 58 8OG "C1'" N9 sing N N 59 8OG "C1'" "H1'" sing N N 60 8OG N9 C8 sing N N 61 8OG N9 C4 sing N N 62 8OG C8 N7 sing N N 63 8OG C8 O8 doub N N 64 8OG N7 C5 sing N N 65 8OG N7 H7 sing N N 66 8OG C5 C6 sing N N 67 8OG C5 C4 doub N N 68 8OG C6 O6 doub N N 69 8OG C6 N1 sing N N 70 8OG N1 C2 sing N N 71 8OG N1 H1 sing N N 72 8OG C2 N2 sing N N 73 8OG C2 N3 doub N N 74 8OG N2 H21 sing N N 75 8OG N2 H22 sing N N 76 8OG N3 C4 sing N N 77 ALA N CA sing N N 78 ALA N H sing N N 79 ALA N H2 sing N N 80 ALA CA C sing N N 81 ALA CA CB sing N N 82 ALA CA HA sing N N 83 ALA C O doub N N 84 ALA C OXT sing N N 85 ALA CB HB1 sing N N 86 ALA CB HB2 sing N N 87 ALA CB HB3 sing N N 88 ALA OXT HXT sing N N 89 ARG N CA sing N N 90 ARG N H sing N N 91 ARG N H2 sing N N 92 ARG CA C sing N N 93 ARG CA CB sing N N 94 ARG CA HA sing N N 95 ARG C O doub N N 96 ARG C OXT sing N N 97 ARG CB CG sing N N 98 ARG CB HB2 sing N N 99 ARG CB HB3 sing N N 100 ARG CG CD sing N N 101 ARG CG HG2 sing N N 102 ARG CG HG3 sing N N 103 ARG CD NE sing N N 104 ARG CD HD2 sing N N 105 ARG CD HD3 sing N N 106 ARG NE CZ sing N N 107 ARG NE HE sing N N 108 ARG CZ NH1 sing N N 109 ARG CZ NH2 doub N N 110 ARG NH1 HH11 sing N N 111 ARG NH1 HH12 sing N N 112 ARG NH2 HH21 sing N N 113 ARG NH2 HH22 sing N N 114 ARG OXT HXT sing N N 115 ASN N CA sing N N 116 ASN N H sing N N 117 ASN N H2 sing N N 118 ASN CA C sing N N 119 ASN CA CB sing N N 120 ASN CA HA sing N N 121 ASN C O doub N N 122 ASN C OXT sing N N 123 ASN CB CG sing N N 124 ASN CB HB2 sing N N 125 ASN CB HB3 sing N N 126 ASN CG OD1 doub N N 127 ASN CG ND2 sing N N 128 ASN ND2 HD21 sing N N 129 ASN ND2 HD22 sing N N 130 ASN OXT HXT sing N N 131 ASP N CA sing N N 132 ASP N H sing N N 133 ASP N H2 sing N N 134 ASP CA C sing N N 135 ASP CA CB sing N N 136 ASP CA HA sing N N 137 ASP C O doub N N 138 ASP C OXT sing N N 139 ASP CB CG sing N N 140 ASP CB HB2 sing N N 141 ASP CB HB3 sing N N 142 ASP CG OD1 doub N N 143 ASP CG OD2 sing N N 144 ASP OD2 HD2 sing N N 145 ASP OXT HXT sing N N 146 CYS N CA sing N N 147 CYS N H sing N N 148 CYS N H2 sing N N 149 CYS CA C sing N N 150 CYS CA CB sing N N 151 CYS CA HA sing N N 152 CYS C O doub N N 153 CYS C OXT sing N N 154 CYS CB SG sing N N 155 CYS CB HB2 sing N N 156 CYS CB HB3 sing N N 157 CYS SG HG sing N N 158 CYS OXT HXT sing N N 159 DA OP3 P sing N N 160 DA OP3 HOP3 sing N N 161 DA P OP1 doub N N 162 DA P OP2 sing N N 163 DA P "O5'" sing N N 164 DA OP2 HOP2 sing N N 165 DA "O5'" "C5'" sing N N 166 DA "C5'" "C4'" sing N N 167 DA "C5'" "H5'" sing N N 168 DA "C5'" "H5''" sing N N 169 DA "C4'" "O4'" sing N N 170 DA "C4'" "C3'" sing N N 171 DA "C4'" "H4'" sing N N 172 DA "O4'" "C1'" sing N N 173 DA "C3'" "O3'" sing N N 174 DA "C3'" "C2'" sing N N 175 DA "C3'" "H3'" sing N N 176 DA "O3'" "HO3'" sing N N 177 DA "C2'" "C1'" sing N N 178 DA "C2'" "H2'" sing N N 179 DA "C2'" "H2''" sing N N 180 DA "C1'" N9 sing N N 181 DA "C1'" "H1'" sing N N 182 DA N9 C8 sing Y N 183 DA N9 C4 sing Y N 184 DA C8 N7 doub Y N 185 DA C8 H8 sing N N 186 DA N7 C5 sing Y N 187 DA C5 C6 sing Y N 188 DA C5 C4 doub Y N 189 DA C6 N6 sing N N 190 DA C6 N1 doub Y N 191 DA N6 H61 sing N N 192 DA N6 H62 sing N N 193 DA N1 C2 sing Y N 194 DA C2 N3 doub Y N 195 DA C2 H2 sing N N 196 DA N3 C4 sing Y N 197 DC OP3 P sing N N 198 DC OP3 HOP3 sing N N 199 DC P OP1 doub N N 200 DC P OP2 sing N N 201 DC P "O5'" sing N N 202 DC OP2 HOP2 sing N N 203 DC "O5'" "C5'" sing N N 204 DC "C5'" "C4'" sing N N 205 DC "C5'" "H5'" sing N N 206 DC "C5'" "H5''" sing N N 207 DC "C4'" "O4'" sing N N 208 DC "C4'" "C3'" sing N N 209 DC "C4'" "H4'" sing N N 210 DC "O4'" "C1'" sing N N 211 DC "C3'" "O3'" sing N N 212 DC "C3'" "C2'" sing N N 213 DC "C3'" "H3'" sing N N 214 DC "O3'" "HO3'" sing N N 215 DC "C2'" "C1'" sing N N 216 DC "C2'" "H2'" sing N N 217 DC "C2'" "H2''" sing N N 218 DC "C1'" N1 sing N N 219 DC "C1'" "H1'" sing N N 220 DC N1 C2 sing N N 221 DC N1 C6 sing N N 222 DC C2 O2 doub N N 223 DC C2 N3 sing N N 224 DC N3 C4 doub N N 225 DC C4 N4 sing N N 226 DC C4 C5 sing N N 227 DC N4 H41 sing N N 228 DC N4 H42 sing N N 229 DC C5 C6 doub N N 230 DC C5 H5 sing N N 231 DC C6 H6 sing N N 232 DG OP3 P sing N N 233 DG OP3 HOP3 sing N N 234 DG P OP1 doub N N 235 DG P OP2 sing N N 236 DG P "O5'" sing N N 237 DG OP2 HOP2 sing N N 238 DG "O5'" "C5'" sing N N 239 DG "C5'" "C4'" sing N N 240 DG "C5'" "H5'" sing N N 241 DG "C5'" "H5''" sing N N 242 DG "C4'" "O4'" sing N N 243 DG "C4'" "C3'" sing N N 244 DG "C4'" "H4'" sing N N 245 DG "O4'" "C1'" sing N N 246 DG "C3'" "O3'" sing N N 247 DG "C3'" "C2'" sing N N 248 DG "C3'" "H3'" sing N N 249 DG "O3'" "HO3'" sing N N 250 DG "C2'" "C1'" sing N N 251 DG "C2'" "H2'" sing N N 252 DG "C2'" "H2''" sing N N 253 DG "C1'" N9 sing N N 254 DG "C1'" "H1'" sing N N 255 DG N9 C8 sing Y N 256 DG N9 C4 sing Y N 257 DG C8 N7 doub Y N 258 DG C8 H8 sing N N 259 DG N7 C5 sing Y N 260 DG C5 C6 sing N N 261 DG C5 C4 doub Y N 262 DG C6 O6 doub N N 263 DG C6 N1 sing N N 264 DG N1 C2 sing N N 265 DG N1 H1 sing N N 266 DG C2 N2 sing N N 267 DG C2 N3 doub N N 268 DG N2 H21 sing N N 269 DG N2 H22 sing N N 270 DG N3 C4 sing N N 271 DT OP3 P sing N N 272 DT OP3 HOP3 sing N N 273 DT P OP1 doub N N 274 DT P OP2 sing N N 275 DT P "O5'" sing N N 276 DT OP2 HOP2 sing N N 277 DT "O5'" "C5'" sing N N 278 DT "C5'" "C4'" sing N N 279 DT "C5'" "H5'" sing N N 280 DT "C5'" "H5''" sing N N 281 DT "C4'" "O4'" sing N N 282 DT "C4'" "C3'" sing N N 283 DT "C4'" "H4'" sing N N 284 DT "O4'" "C1'" sing N N 285 DT "C3'" "O3'" sing N N 286 DT "C3'" "C2'" sing N N 287 DT "C3'" "H3'" sing N N 288 DT "O3'" "HO3'" sing N N 289 DT "C2'" "C1'" sing N N 290 DT "C2'" "H2'" sing N N 291 DT "C2'" "H2''" sing N N 292 DT "C1'" N1 sing N N 293 DT "C1'" "H1'" sing N N 294 DT N1 C2 sing N N 295 DT N1 C6 sing N N 296 DT C2 O2 doub N N 297 DT C2 N3 sing N N 298 DT N3 C4 sing N N 299 DT N3 H3 sing N N 300 DT C4 O4 doub N N 301 DT C4 C5 sing N N 302 DT C5 C7 sing N N 303 DT C5 C6 doub N N 304 DT C7 H71 sing N N 305 DT C7 H72 sing N N 306 DT C7 H73 sing N N 307 DT C6 H6 sing N N 308 GLN N CA sing N N 309 GLN N H sing N N 310 GLN N H2 sing N N 311 GLN CA C sing N N 312 GLN CA CB sing N N 313 GLN CA HA sing N N 314 GLN C O doub N N 315 GLN C OXT sing N N 316 GLN CB CG sing N N 317 GLN CB HB2 sing N N 318 GLN CB HB3 sing N N 319 GLN CG CD sing N N 320 GLN CG HG2 sing N N 321 GLN CG HG3 sing N N 322 GLN CD OE1 doub N N 323 GLN CD NE2 sing N N 324 GLN NE2 HE21 sing N N 325 GLN NE2 HE22 sing N N 326 GLN OXT HXT sing N N 327 GLU N CA sing N N 328 GLU N H sing N N 329 GLU N H2 sing N N 330 GLU CA C sing N N 331 GLU CA CB sing N N 332 GLU CA HA sing N N 333 GLU C O doub N N 334 GLU C OXT sing N N 335 GLU CB CG sing N N 336 GLU CB HB2 sing N N 337 GLU CB HB3 sing N N 338 GLU CG CD sing N N 339 GLU CG HG2 sing N N 340 GLU CG HG3 sing N N 341 GLU CD OE1 doub N N 342 GLU CD OE2 sing N N 343 GLU OE2 HE2 sing N N 344 GLU OXT HXT sing N N 345 GLY N CA sing N N 346 GLY N H sing N N 347 GLY N H2 sing N N 348 GLY CA C sing N N 349 GLY CA HA2 sing N N 350 GLY CA HA3 sing N N 351 GLY C O doub N N 352 GLY C OXT sing N N 353 GLY OXT HXT sing N N 354 HIS N CA sing N N 355 HIS N H sing N N 356 HIS N H2 sing N N 357 HIS CA C sing N N 358 HIS CA CB sing N N 359 HIS CA HA sing N N 360 HIS C O doub N N 361 HIS C OXT sing N N 362 HIS CB CG sing N N 363 HIS CB HB2 sing N N 364 HIS CB HB3 sing N N 365 HIS CG ND1 sing Y N 366 HIS CG CD2 doub Y N 367 HIS ND1 CE1 doub Y N 368 HIS ND1 HD1 sing N N 369 HIS CD2 NE2 sing Y N 370 HIS CD2 HD2 sing N N 371 HIS CE1 NE2 sing Y N 372 HIS CE1 HE1 sing N N 373 HIS NE2 HE2 sing N N 374 HIS OXT HXT sing N N 375 HOH O H1 sing N N 376 HOH O H2 sing N N 377 ILE N CA sing N N 378 ILE N H sing N N 379 ILE N H2 sing N N 380 ILE CA C sing N N 381 ILE CA CB sing N N 382 ILE CA HA sing N N 383 ILE C O doub N N 384 ILE C OXT sing N N 385 ILE CB CG1 sing N N 386 ILE CB CG2 sing N N 387 ILE CB HB sing N N 388 ILE CG1 CD1 sing N N 389 ILE CG1 HG12 sing N N 390 ILE CG1 HG13 sing N N 391 ILE CG2 HG21 sing N N 392 ILE CG2 HG22 sing N N 393 ILE CG2 HG23 sing N N 394 ILE CD1 HD11 sing N N 395 ILE CD1 HD12 sing N N 396 ILE CD1 HD13 sing N N 397 ILE OXT HXT sing N N 398 LEU N CA sing N N 399 LEU N H sing N N 400 LEU N H2 sing N N 401 LEU CA C sing N N 402 LEU CA CB sing N N 403 LEU CA HA sing N N 404 LEU C O doub N N 405 LEU C OXT sing N N 406 LEU CB CG sing N N 407 LEU CB HB2 sing N N 408 LEU CB HB3 sing N N 409 LEU CG CD1 sing N N 410 LEU CG CD2 sing N N 411 LEU CG HG sing N N 412 LEU CD1 HD11 sing N N 413 LEU CD1 HD12 sing N N 414 LEU CD1 HD13 sing N N 415 LEU CD2 HD21 sing N N 416 LEU CD2 HD22 sing N N 417 LEU CD2 HD23 sing N N 418 LEU OXT HXT sing N N 419 LYS N CA sing N N 420 LYS N H sing N N 421 LYS N H2 sing N N 422 LYS CA C sing N N 423 LYS CA CB sing N N 424 LYS CA HA sing N N 425 LYS C O doub N N 426 LYS C OXT sing N N 427 LYS CB CG sing N N 428 LYS CB HB2 sing N N 429 LYS CB HB3 sing N N 430 LYS CG CD sing N N 431 LYS CG HG2 sing N N 432 LYS CG HG3 sing N N 433 LYS CD CE sing N N 434 LYS CD HD2 sing N N 435 LYS CD HD3 sing N N 436 LYS CE NZ sing N N 437 LYS CE HE2 sing N N 438 LYS CE HE3 sing N N 439 LYS NZ HZ1 sing N N 440 LYS NZ HZ2 sing N N 441 LYS NZ HZ3 sing N N 442 LYS OXT HXT sing N N 443 MET N CA sing N N 444 MET N H sing N N 445 MET N H2 sing N N 446 MET CA C sing N N 447 MET CA CB sing N N 448 MET CA HA sing N N 449 MET C O doub N N 450 MET C OXT sing N N 451 MET CB CG sing N N 452 MET CB HB2 sing N N 453 MET CB HB3 sing N N 454 MET CG SD sing N N 455 MET CG HG2 sing N N 456 MET CG HG3 sing N N 457 MET SD CE sing N N 458 MET CE HE1 sing N N 459 MET CE HE2 sing N N 460 MET CE HE3 sing N N 461 MET OXT HXT sing N N 462 PHE N CA sing N N 463 PHE N H sing N N 464 PHE N H2 sing N N 465 PHE CA C sing N N 466 PHE CA CB sing N N 467 PHE CA HA sing N N 468 PHE C O doub N N 469 PHE C OXT sing N N 470 PHE CB CG sing N N 471 PHE CB HB2 sing N N 472 PHE CB HB3 sing N N 473 PHE CG CD1 doub Y N 474 PHE CG CD2 sing Y N 475 PHE CD1 CE1 sing Y N 476 PHE CD1 HD1 sing N N 477 PHE CD2 CE2 doub Y N 478 PHE CD2 HD2 sing N N 479 PHE CE1 CZ doub Y N 480 PHE CE1 HE1 sing N N 481 PHE CE2 CZ sing Y N 482 PHE CE2 HE2 sing N N 483 PHE CZ HZ sing N N 484 PHE OXT HXT sing N N 485 PRO N CA sing N N 486 PRO N CD sing N N 487 PRO N H sing N N 488 PRO CA C sing N N 489 PRO CA CB sing N N 490 PRO CA HA sing N N 491 PRO C O doub N N 492 PRO C OXT sing N N 493 PRO CB CG sing N N 494 PRO CB HB2 sing N N 495 PRO CB HB3 sing N N 496 PRO CG CD sing N N 497 PRO CG HG2 sing N N 498 PRO CG HG3 sing N N 499 PRO CD HD2 sing N N 500 PRO CD HD3 sing N N 501 PRO OXT HXT sing N N 502 SER N CA sing N N 503 SER N H sing N N 504 SER N H2 sing N N 505 SER CA C sing N N 506 SER CA CB sing N N 507 SER CA HA sing N N 508 SER C O doub N N 509 SER C OXT sing N N 510 SER CB OG sing N N 511 SER CB HB2 sing N N 512 SER CB HB3 sing N N 513 SER OG HG sing N N 514 SER OXT HXT sing N N 515 THR N CA sing N N 516 THR N H sing N N 517 THR N H2 sing N N 518 THR CA C sing N N 519 THR CA CB sing N N 520 THR CA HA sing N N 521 THR C O doub N N 522 THR C OXT sing N N 523 THR CB OG1 sing N N 524 THR CB CG2 sing N N 525 THR CB HB sing N N 526 THR OG1 HG1 sing N N 527 THR CG2 HG21 sing N N 528 THR CG2 HG22 sing N N 529 THR CG2 HG23 sing N N 530 THR OXT HXT sing N N 531 TRP N CA sing N N 532 TRP N H sing N N 533 TRP N H2 sing N N 534 TRP CA C sing N N 535 TRP CA CB sing N N 536 TRP CA HA sing N N 537 TRP C O doub N N 538 TRP C OXT sing N N 539 TRP CB CG sing N N 540 TRP CB HB2 sing N N 541 TRP CB HB3 sing N N 542 TRP CG CD1 doub Y N 543 TRP CG CD2 sing Y N 544 TRP CD1 NE1 sing Y N 545 TRP CD1 HD1 sing N N 546 TRP CD2 CE2 doub Y N 547 TRP CD2 CE3 sing Y N 548 TRP NE1 CE2 sing Y N 549 TRP NE1 HE1 sing N N 550 TRP CE2 CZ2 sing Y N 551 TRP CE3 CZ3 doub Y N 552 TRP CE3 HE3 sing N N 553 TRP CZ2 CH2 doub Y N 554 TRP CZ2 HZ2 sing N N 555 TRP CZ3 CH2 sing Y N 556 TRP CZ3 HZ3 sing N N 557 TRP CH2 HH2 sing N N 558 TRP OXT HXT sing N N 559 TYR N CA sing N N 560 TYR N H sing N N 561 TYR N H2 sing N N 562 TYR CA C sing N N 563 TYR CA CB sing N N 564 TYR CA HA sing N N 565 TYR C O doub N N 566 TYR C OXT sing N N 567 TYR CB CG sing N N 568 TYR CB HB2 sing N N 569 TYR CB HB3 sing N N 570 TYR CG CD1 doub Y N 571 TYR CG CD2 sing Y N 572 TYR CD1 CE1 sing Y N 573 TYR CD1 HD1 sing N N 574 TYR CD2 CE2 doub Y N 575 TYR CD2 HD2 sing N N 576 TYR CE1 CZ doub Y N 577 TYR CE1 HE1 sing N N 578 TYR CE2 CZ sing Y N 579 TYR CE2 HE2 sing N N 580 TYR CZ OH sing N N 581 TYR OH HH sing N N 582 TYR OXT HXT sing N N 583 VAL N CA sing N N 584 VAL N H sing N N 585 VAL N H2 sing N N 586 VAL CA C sing N N 587 VAL CA CB sing N N 588 VAL CA HA sing N N 589 VAL C O doub N N 590 VAL C OXT sing N N 591 VAL CB CG1 sing N N 592 VAL CB CG2 sing N N 593 VAL CB HB sing N N 594 VAL CG1 HG11 sing N N 595 VAL CG1 HG12 sing N N 596 VAL CG1 HG13 sing N N 597 VAL CG2 HG21 sing N N 598 VAL CG2 HG22 sing N N 599 VAL CG2 HG23 sing N N 600 VAL OXT HXT sing N N 601 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1MQ2 'double helix' 1MQ2 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 C DG 5 1_555 -0.864 0.067 0.498 -5.166 -5.074 4.946 1 T_DC1:DG5_D T 1 ? D 5 ? 19 1 1 A DC 2 1_555 C DG 4 1_555 0.927 -0.336 0.505 -10.660 3.367 3.805 2 T_DC2:DG4_D T 2 ? D 4 ? 19 1 1 A DG 3 1_555 C DC 3 1_555 0.289 -0.122 0.260 5.686 -9.993 -8.952 3 T_DG3:DC3_D T 3 ? D 3 ? 19 1 1 A DA 4 1_555 C DT 2 1_555 -0.459 0.141 0.370 4.676 -1.357 -5.076 4 T_DA4:DT2_D T 4 ? D 2 ? 20 1 1 A DC 5 1_555 C DG 1 1_555 0.110 -0.013 -0.032 13.140 -6.136 -0.603 5 T_DC5:DG1_D T 5 ? D 1 ? 19 1 1 A DT 7 1_555 B 2DA 10 1_555 0.913 -0.546 -0.320 -22.790 10.305 -6.840 6 T_DT7:2DA10_P T 7 ? P 10 ? 20 1 1 A DC 8 1_555 B DG 9 1_555 0.774 -0.398 -0.011 -9.210 -1.123 -3.853 7 T_DC8:DG9_P T 8 ? P 9 ? 19 1 1 A DG 9 1_555 B DC 8 1_555 0.175 -0.012 0.052 3.408 -1.709 -9.288 8 T_DG9:DC8_P T 9 ? P 8 ? 19 1 1 A DC 10 1_555 B DG 7 1_555 0.196 0.204 0.635 -0.719 -6.654 -0.863 9 T_DC10:DG7_P T 10 ? P 7 ? 19 1 1 A DA 11 1_555 B DT 6 1_555 0.321 0.415 0.566 -0.594 -9.596 2.425 10 T_DA11:DT6_P T 11 ? P 6 ? ? ? 1 A DT 12 1_555 B DA 5 1_555 -0.405 0.216 0.093 0.717 -15.094 0.831 11 T_DT12:DA5_P T 12 ? P 5 ? 20 1 1 A DC 13 1_555 B DG 4 1_555 0.220 -0.279 0.265 -4.921 -8.325 -0.006 12 T_DC13:DG4_P T 13 ? P 4 ? 19 1 1 A DA 14 1_555 B DT 3 1_555 0.782 -0.261 0.139 2.516 -8.704 -0.395 13 T_DA14:DT3_P T 14 ? P 3 ? 20 1 1 A DG 15 1_555 B DC 2 1_555 0.438 -0.120 -0.456 0.053 -6.518 -4.155 14 T_DG15:DC2_P T 15 ? P 2 ? 19 1 1 A DC 16 1_555 B DG 1 1_555 1.445 -0.324 0.032 1.830 -7.881 9.677 15 T_DC16:DG1_P T 16 ? P 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 C DG 5 1_555 A DC 2 1_555 C DG 4 1_555 0.808 0.319 3.570 0.064 3.664 42.324 0.032 -1.108 3.586 5.063 -0.089 42.475 1 TT_DC1DC2:DG4DG5_DD T 1 ? D 5 ? T 2 ? D 4 ? 1 A DC 2 1_555 C DG 4 1_555 A DG 3 1_555 C DC 3 1_555 -1.471 0.580 2.965 -3.115 -3.291 31.284 1.626 2.171 3.018 -6.062 5.738 31.602 2 TT_DC2DG3:DC3DG4_DD T 2 ? D 4 ? T 3 ? D 3 ? 1 A DG 3 1_555 C DC 3 1_555 A DA 4 1_555 C DT 2 1_555 -0.161 -0.560 3.318 -3.387 -2.812 33.266 -0.498 -0.291 3.352 -4.885 5.884 33.548 3 TT_DG3DA4:DT2DC3_DD T 3 ? D 3 ? T 4 ? D 2 ? 1 A DA 4 1_555 C DT 2 1_555 A DC 5 1_555 C DG 1 1_555 0.605 -0.377 3.151 6.036 -2.500 34.304 -0.256 -0.110 3.226 -4.192 -10.120 34.902 4 TT_DA4DC5:DG1DT2_DD T 4 ? D 2 ? T 5 ? D 1 ? 1 A DT 7 1_555 B 2DA 10 1_555 A DC 8 1_555 B DG 9 1_555 0.551 0.489 3.399 -2.612 5.752 22.949 -0.797 -2.238 3.338 14.116 6.411 23.792 5 TT_DT7DC8:DG92DA10_PP T 7 ? P 10 ? T 8 ? P 9 ? 1 A DC 8 1_555 B DG 9 1_555 A DG 9 1_555 B DC 8 1_555 -1.101 0.641 3.177 -5.356 6.907 33.038 -0.022 1.011 3.371 11.889 9.218 34.143 6 TT_DC8DG9:DC8DG9_PP T 8 ? P 9 ? T 9 ? P 8 ? 1 A DG 9 1_555 B DC 8 1_555 A DC 10 1_555 B DG 7 1_555 0.210 -0.867 3.359 -4.903 3.489 30.575 -2.285 -1.334 3.172 6.536 9.186 31.147 7 TT_DG9DC10:DG7DC8_PP T 9 ? P 8 ? T 10 ? P 7 ? 1 A DC 10 1_555 B DG 7 1_555 A DA 11 1_555 B DT 6 1_555 -0.086 -0.193 3.198 0.856 1.310 39.967 -0.429 0.221 3.188 1.916 -1.251 39.997 8 TT_DC10DA11:DT6DG7_PP T 10 ? P 7 ? T 11 ? P 6 ? 1 A DA 11 1_555 B DT 6 1_555 A DT 12 1_555 B DA 5 1_555 -0.102 -0.828 3.128 3.313 -0.921 30.411 -1.395 0.822 3.123 -1.749 -6.289 30.600 9 TT_DA11DT12:DA5DT6_PP T 11 ? P 6 ? T 12 ? P 5 ? 1 A DT 12 1_555 B DA 5 1_555 A DC 13 1_555 B DG 4 1_555 0.460 -0.347 3.484 -0.773 -1.806 40.973 -0.285 -0.746 3.487 -2.578 1.103 41.018 10 TT_DT12DC13:DG4DA5_PP T 12 ? P 5 ? T 13 ? P 4 ? 1 A DC 13 1_555 B DG 4 1_555 A DA 14 1_555 B DT 3 1_555 -0.531 -0.125 3.109 0.682 2.510 38.654 -0.480 0.880 3.086 3.787 -1.029 38.738 11 TT_DC13DA14:DT3DG4_PP T 13 ? P 4 ? T 14 ? P 3 ? 1 A DA 14 1_555 B DT 3 1_555 A DG 15 1_555 B DC 2 1_555 0.161 -0.329 3.496 4.378 -1.851 29.415 -0.225 0.670 3.497 -3.615 -8.552 29.789 12 TT_DA14DG15:DC2DT3_PP T 14 ? P 3 ? T 15 ? P 2 ? 1 A DG 15 1_555 B DC 2 1_555 A DC 16 1_555 B DG 1 1_555 1.068 -0.107 3.240 -2.755 7.535 40.373 -0.951 -1.812 3.096 10.788 3.945 41.129 13 TT_DG15DC16:DG1DC2_PP T 15 ? P 2 ? T 16 ? P 1 ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1MQ3 _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 1MQ2 _atom_sites.fract_transf_matrix[1][1] 0.018116 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.005229 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012346 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018720 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NA O P S # loop_