data_1NRK # _entry.id 1NRK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.362 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1NRK pdb_00001nrk 10.2210/pdb1nrk/pdb RCSB RCSB018145 ? ? WWPDB D_1000018145 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id ygfZ _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1NRK _pdbx_database_status.recvd_initial_deposition_date 2003-01-24 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Teplyakov, A.' 1 'Obmolova, G.' 2 'Gilliland, G.L.' 3 'Structure 2 Function Project (S2F)' 4 # _citation.id primary _citation.title 'Crystal structure of the YgfZ protein from Escherichia coli suggests a folate-dependent regulatory role in one-carbon metabolism.' _citation.journal_abbrev J.Bacteriol. _citation.journal_volume 186 _citation.page_first 7134 _citation.page_last 7140 _citation.year 2004 _citation.journal_id_ASTM JOBAAY _citation.country US _citation.journal_id_ISSN 0021-9193 _citation.journal_id_CSD 0767 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15489424 _citation.pdbx_database_id_DOI 10.1128/JB.186.21.7134-7140.2004 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Teplyakov, A.' 1 ? primary 'Obmolova, G.' 2 ? primary 'Sarikaya, E.' 3 ? primary 'Pullalarevu, S.' 4 ? primary 'Krajewski, W.' 5 ? primary 'Galkin, A.' 6 ? primary 'Howard, A.J.' 7 ? primary 'Herzberg, O.' 8 ? primary 'Gilliland, G.L.' 9 ? # _cell.entry_id 1NRK _cell.length_a 151.000 _cell.length_b 151.000 _cell.length_c 68.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1NRK _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'YGFZ Protein' 36755.121 1 ? ? ? ? 2 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 3 water nat water 18.015 215 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Spot PR51' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GSH(MSE)AFTPFPPRQPTASARLPLTL(MSE)TLDDWALATITGADSEKY(MSE)QGQVTADVSQ(MSE)AEDQHLLAA HCDAKGK(MSE)WSNLRLFRDGDGFAWIERRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELP SKEKQVVKEGATTLLWFEHPAERFLIVTDEATAN(MSE)LTDKLRGEAELNNSQQWLALNIEAGFPVIDAANSGQFIPQA TNLQALGGISFKKGCYTGQE(MSE)VARAKFRGANKRALWLLAGSASRLPEAGEDLELK(MSE)GENWRRTGTVLAAVKL EDGQVVVQVV(MSE)NND(MSE)EPDSIFRVRDDANTLHIEPLPYSLE ; _entity_poly.pdbx_seq_one_letter_code_can ;GSHMAFTPFPPRQPTASARLPLTLMTLDDWALATITGADSEKYMQGQVTADVSQMAEDQHLLAAHCDAKGKMWSNLRLFR DGDGFAWIERRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELPSKEKQVVKEGATTLLWFEHP AERFLIVTDEATANMLTDKLRGEAELNNSQQWLALNIEAGFPVIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMVAR AKFRGANKRALWLLAGSASRLPEAGEDLELKMGENWRRTGTVLAAVKLEDGQVVVQVVMNNDMEPDSIFRVRDDANTLHI EPLPYSLE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ygfZ # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MSE n 1 5 ALA n 1 6 PHE n 1 7 THR n 1 8 PRO n 1 9 PHE n 1 10 PRO n 1 11 PRO n 1 12 ARG n 1 13 GLN n 1 14 PRO n 1 15 THR n 1 16 ALA n 1 17 SER n 1 18 ALA n 1 19 ARG n 1 20 LEU n 1 21 PRO n 1 22 LEU n 1 23 THR n 1 24 LEU n 1 25 MSE n 1 26 THR n 1 27 LEU n 1 28 ASP n 1 29 ASP n 1 30 TRP n 1 31 ALA n 1 32 LEU n 1 33 ALA n 1 34 THR n 1 35 ILE n 1 36 THR n 1 37 GLY n 1 38 ALA n 1 39 ASP n 1 40 SER n 1 41 GLU n 1 42 LYS n 1 43 TYR n 1 44 MSE n 1 45 GLN n 1 46 GLY n 1 47 GLN n 1 48 VAL n 1 49 THR n 1 50 ALA n 1 51 ASP n 1 52 VAL n 1 53 SER n 1 54 GLN n 1 55 MSE n 1 56 ALA n 1 57 GLU n 1 58 ASP n 1 59 GLN n 1 60 HIS n 1 61 LEU n 1 62 LEU n 1 63 ALA n 1 64 ALA n 1 65 HIS n 1 66 CYS n 1 67 ASP n 1 68 ALA n 1 69 LYS n 1 70 GLY n 1 71 LYS n 1 72 MSE n 1 73 TRP n 1 74 SER n 1 75 ASN n 1 76 LEU n 1 77 ARG n 1 78 LEU n 1 79 PHE n 1 80 ARG n 1 81 ASP n 1 82 GLY n 1 83 ASP n 1 84 GLY n 1 85 PHE n 1 86 ALA n 1 87 TRP n 1 88 ILE n 1 89 GLU n 1 90 ARG n 1 91 ARG n 1 92 SER n 1 93 VAL n 1 94 ARG n 1 95 GLU n 1 96 PRO n 1 97 GLN n 1 98 LEU n 1 99 THR n 1 100 GLU n 1 101 LEU n 1 102 LYS n 1 103 LYS n 1 104 TYR n 1 105 ALA n 1 106 VAL n 1 107 PHE n 1 108 SER n 1 109 LYS n 1 110 VAL n 1 111 THR n 1 112 ILE n 1 113 ALA n 1 114 PRO n 1 115 ASP n 1 116 ASP n 1 117 GLU n 1 118 ARG n 1 119 VAL n 1 120 LEU n 1 121 LEU n 1 122 GLY n 1 123 VAL n 1 124 ALA n 1 125 GLY n 1 126 PHE n 1 127 GLN n 1 128 ALA n 1 129 ARG n 1 130 ALA n 1 131 ALA n 1 132 LEU n 1 133 ALA n 1 134 ASN n 1 135 LEU n 1 136 PHE n 1 137 SER n 1 138 GLU n 1 139 LEU n 1 140 PRO n 1 141 SER n 1 142 LYS n 1 143 GLU n 1 144 LYS n 1 145 GLN n 1 146 VAL n 1 147 VAL n 1 148 LYS n 1 149 GLU n 1 150 GLY n 1 151 ALA n 1 152 THR n 1 153 THR n 1 154 LEU n 1 155 LEU n 1 156 TRP n 1 157 PHE n 1 158 GLU n 1 159 HIS n 1 160 PRO n 1 161 ALA n 1 162 GLU n 1 163 ARG n 1 164 PHE n 1 165 LEU n 1 166 ILE n 1 167 VAL n 1 168 THR n 1 169 ASP n 1 170 GLU n 1 171 ALA n 1 172 THR n 1 173 ALA n 1 174 ASN n 1 175 MSE n 1 176 LEU n 1 177 THR n 1 178 ASP n 1 179 LYS n 1 180 LEU n 1 181 ARG n 1 182 GLY n 1 183 GLU n 1 184 ALA n 1 185 GLU n 1 186 LEU n 1 187 ASN n 1 188 ASN n 1 189 SER n 1 190 GLN n 1 191 GLN n 1 192 TRP n 1 193 LEU n 1 194 ALA n 1 195 LEU n 1 196 ASN n 1 197 ILE n 1 198 GLU n 1 199 ALA n 1 200 GLY n 1 201 PHE n 1 202 PRO n 1 203 VAL n 1 204 ILE n 1 205 ASP n 1 206 ALA n 1 207 ALA n 1 208 ASN n 1 209 SER n 1 210 GLY n 1 211 GLN n 1 212 PHE n 1 213 ILE n 1 214 PRO n 1 215 GLN n 1 216 ALA n 1 217 THR n 1 218 ASN n 1 219 LEU n 1 220 GLN n 1 221 ALA n 1 222 LEU n 1 223 GLY n 1 224 GLY n 1 225 ILE n 1 226 SER n 1 227 PHE n 1 228 LYS n 1 229 LYS n 1 230 GLY n 1 231 CYS n 1 232 TYR n 1 233 THR n 1 234 GLY n 1 235 GLN n 1 236 GLU n 1 237 MSE n 1 238 VAL n 1 239 ALA n 1 240 ARG n 1 241 ALA n 1 242 LYS n 1 243 PHE n 1 244 ARG n 1 245 GLY n 1 246 ALA n 1 247 ASN n 1 248 LYS n 1 249 ARG n 1 250 ALA n 1 251 LEU n 1 252 TRP n 1 253 LEU n 1 254 LEU n 1 255 ALA n 1 256 GLY n 1 257 SER n 1 258 ALA n 1 259 SER n 1 260 ARG n 1 261 LEU n 1 262 PRO n 1 263 GLU n 1 264 ALA n 1 265 GLY n 1 266 GLU n 1 267 ASP n 1 268 LEU n 1 269 GLU n 1 270 LEU n 1 271 LYS n 1 272 MSE n 1 273 GLY n 1 274 GLU n 1 275 ASN n 1 276 TRP n 1 277 ARG n 1 278 ARG n 1 279 THR n 1 280 GLY n 1 281 THR n 1 282 VAL n 1 283 LEU n 1 284 ALA n 1 285 ALA n 1 286 VAL n 1 287 LYS n 1 288 LEU n 1 289 GLU n 1 290 ASP n 1 291 GLY n 1 292 GLN n 1 293 VAL n 1 294 VAL n 1 295 VAL n 1 296 GLN n 1 297 VAL n 1 298 VAL n 1 299 MSE n 1 300 ASN n 1 301 ASN n 1 302 ASP n 1 303 MSE n 1 304 GLU n 1 305 PRO n 1 306 ASP n 1 307 SER n 1 308 ILE n 1 309 PHE n 1 310 ARG n 1 311 VAL n 1 312 ARG n 1 313 ASP n 1 314 ASP n 1 315 ALA n 1 316 ASN n 1 317 THR n 1 318 LEU n 1 319 HIS n 1 320 ILE n 1 321 GLU n 1 322 PRO n 1 323 LEU n 1 324 PRO n 1 325 TYR n 1 326 SER n 1 327 LEU n 1 328 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Escherichia _entity_src_gen.pdbx_gene_src_gene 'YGFZ OR B2898' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 562 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET15b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code UP14_ECOLI _struct_ref.pdbx_db_accession P39179 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MAFTPFPPRQPTASARLPLTLMTLDDWALATITGADSEKYMQGQVTADVSQMAEDQHLLAAHCDAKGKMWSNLRLFRDGD GFAWIERRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELPSKEKQVVKEGATTLLWFEHPAER FLIVTDEATANMLTDKLRGEAELNNSQQWLALNIEAGFPVIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKF RGANKRALWLLAGSASRLPEAGEDLELKMGENWRRTGTVLAAVKLEDGQVVVQVVMNNDMEPDSIFRVRDDANTLHIEPL PYSLE ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1NRK _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 328 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P39179 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 325 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 325 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1NRK GLY A 1 ? UNP P39179 ? ? 'expression tag' -2 1 1 1NRK SER A 2 ? UNP P39179 ? ? 'expression tag' -1 2 1 1NRK HIS A 3 ? UNP P39179 ? ? 'expression tag' 0 3 1 1NRK MSE A 4 ? UNP P39179 MET 1 'modified residue' 1 4 1 1NRK MSE A 25 ? UNP P39179 MET 22 'modified residue' 22 5 1 1NRK MSE A 44 ? UNP P39179 MET 41 'modified residue' 41 6 1 1NRK MSE A 55 ? UNP P39179 MET 52 'modified residue' 52 7 1 1NRK MSE A 72 ? UNP P39179 MET 69 'modified residue' 69 8 1 1NRK MSE A 175 ? UNP P39179 MET 172 'modified residue' 172 9 1 1NRK MSE A 237 ? UNP P39179 MET 234 'modified residue' 234 10 1 1NRK MSE A 272 ? UNP P39179 MET 269 'modified residue' 269 11 1 1NRK MSE A 299 ? UNP P39179 MET 296 'modified residue' 296 12 1 1NRK MSE A 303 ? UNP P39179 MET 300 'modified residue' 300 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1NRK _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 5.79 _exptl_crystal.density_percent_sol 78.59 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.5 _exptl_crystal_grow.pdbx_details '0.1M Na Acetate, 30% Ammonium Sulfate, pH 4.5, VAPOR DIFFUSION, HANGING DROP, temperature 295K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2002-04-12 _diffrn_detector.details mirror # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 17-BM' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 17-BM _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.000 # _reflns.entry_id 1NRK _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 20 _reflns.d_resolution_high 2.8 _reflns.number_obs 21998 _reflns.number_all 21998 _reflns.percent_possible_obs 98.5 _reflns.pdbx_Rmerge_I_obs 0.055 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 22.4 _reflns.B_iso_Wilson_estimate 71.3 _reflns.pdbx_redundancy 4.9 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.8 _reflns_shell.d_res_low 2.9 _reflns_shell.percent_possible_all 97.1 _reflns_shell.Rmerge_I_obs 0.423 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.1 _reflns_shell.pdbx_redundancy 4.1 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2412 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1NRK _refine.ls_number_reflns_obs 20431 _refine.ls_number_reflns_all 20431 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 10.00 _refine.ls_d_res_high 2.80 _refine.ls_percent_reflns_obs 100.00 _refine.ls_R_factor_obs 0.19592 _refine.ls_R_factor_all 0.19592 _refine.ls_R_factor_R_work 0.19285 _refine.ls_R_factor_R_free 0.25179 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1106 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.943 _refine.correlation_coeff_Fo_to_Fc_free 0.903 _refine.B_iso_mean 64.4 _refine.aniso_B[1][1] 0.12 _refine.aniso_B[2][2] 0.12 _refine.aniso_B[3][3] -0.18 _refine.aniso_B[1][2] 0.06 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.298 _refine.pdbx_overall_ESU_R_Free 0.264 _refine.overall_SU_ML 0.182 _refine.overall_SU_B 9.468 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1NRK _refine_analyze.Luzzati_coordinate_error_obs 0.298 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free 0.264 _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2536 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 10 _refine_hist.number_atoms_solvent 215 _refine_hist.number_atoms_total 2761 _refine_hist.d_res_high 2.80 _refine_hist.d_res_low 10.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.013 0.021 ? 2594 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.644 1.957 ? 3516 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 7.296 5.000 ? 324 'X-RAY DIFFRACTION' ? r_chiral_restr 0.104 0.200 ? 390 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.004 0.020 ? 1972 'X-RAY DIFFRACTION' ? r_nbd_refined 0.317 0.200 ? 1341 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.229 0.200 ? 182 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.324 0.200 ? 46 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.151 0.200 ? 5 'X-RAY DIFFRACTION' ? r_mcbond_it 4.571 4.000 ? 1619 'X-RAY DIFFRACTION' ? r_mcangle_it 7.674 8.000 ? 2590 'X-RAY DIFFRACTION' ? r_scbond_it 8.741 8.000 ? 975 'X-RAY DIFFRACTION' ? r_scangle_it 10.384 8.000 ? 926 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.804 _refine_ls_shell.d_res_low 2.871 _refine_ls_shell.number_reflns_R_work 1353 _refine_ls_shell.R_factor_R_work 0.398 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.46 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 72 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 1NRK _struct.title 'YGFZ PROTEIN' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1NRK _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS, UNKNOWN FUNCTION' _struct_keywords.text 'YGFZ, STRUCTURAL GENOMICS, UNKNOWN FUNCTION, Structure 2 Function Project, S2F' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 16 ? LEU A 20 ? ALA A 13 LEU A 17 5 ? 5 HELX_P HELX_P2 2 ASP A 39 ? GLY A 46 ? ASP A 36 GLY A 43 1 ? 8 HELX_P HELX_P3 3 VAL A 93 ? TYR A 104 ? VAL A 90 TYR A 101 1 ? 12 HELX_P HELX_P4 4 ALA A 105 ? SER A 108 ? ALA A 102 SER A 105 5 ? 4 HELX_P HELX_P5 5 GLN A 127 ? ASN A 134 ? GLN A 124 ASN A 131 1 ? 8 HELX_P HELX_P6 6 ASP A 169 ? ARG A 181 ? ASP A 166 ARG A 178 1 ? 13 HELX_P HELX_P7 7 SER A 189 ? ALA A 199 ? SER A 186 ALA A 196 1 ? 11 HELX_P HELX_P8 8 ASP A 205 ? SER A 209 ? ASP A 202 SER A 206 5 ? 5 HELX_P HELX_P9 9 ILE A 213 ? GLY A 223 ? ILE A 210 GLY A 220 5 ? 11 HELX_P HELX_P10 10 GLY A 234 ? ARG A 244 ? GLY A 231 ARG A 241 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A MSE 4 C ? ? ? 1_555 A ALA 5 N ? ? A MSE 1 A ALA 2 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale2 covale both ? A LEU 24 C ? ? ? 1_555 A MSE 25 N ? ? A LEU 21 A MSE 22 1_555 ? ? ? ? ? ? ? 1.318 ? ? covale3 covale both ? A MSE 25 C ? ? ? 1_555 A THR 26 N ? ? A MSE 22 A THR 23 1_555 ? ? ? ? ? ? ? 1.312 ? ? covale4 covale both ? A TYR 43 C ? ? ? 1_555 A MSE 44 N ? ? A TYR 40 A MSE 41 1_555 ? ? ? ? ? ? ? 1.344 ? ? covale5 covale both ? A MSE 44 C ? ? ? 1_555 A GLN 45 N ? ? A MSE 41 A GLN 42 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale6 covale both ? A GLN 54 C ? ? ? 1_555 A MSE 55 N ? ? A GLN 51 A MSE 52 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale7 covale both ? A MSE 55 C ? ? ? 1_555 A ALA 56 N ? ? A MSE 52 A ALA 53 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale8 covale both ? A LYS 71 C ? ? ? 1_555 A MSE 72 N ? ? A LYS 68 A MSE 69 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale9 covale both ? A MSE 72 C ? ? ? 1_555 A TRP 73 N ? ? A MSE 69 A TRP 70 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale10 covale both ? A ASN 174 C ? ? ? 1_555 A MSE 175 N ? ? A ASN 171 A MSE 172 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale11 covale both ? A MSE 175 C ? ? ? 1_555 A LEU 176 N ? ? A MSE 172 A LEU 173 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale12 covale both ? A GLU 236 C ? ? ? 1_555 A MSE 237 N ? ? A GLU 233 A MSE 234 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale13 covale both ? A MSE 237 C ? ? ? 1_555 A VAL 238 N ? ? A MSE 234 A VAL 235 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale14 covale both ? A LYS 271 C ? ? ? 1_555 A MSE 272 N ? ? A LYS 268 A MSE 269 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale15 covale both ? A MSE 272 C ? ? ? 1_555 A GLY 273 N ? ? A MSE 269 A GLY 270 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale16 covale both ? A VAL 298 C ? ? ? 1_555 A MSE 299 N ? ? A VAL 295 A MSE 296 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale17 covale both ? A MSE 299 C ? ? ? 1_555 A ASN 300 N ? ? A MSE 296 A ASN 297 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale18 covale both ? A ASP 302 C ? ? ? 1_555 A MSE 303 N ? ? A ASP 299 A MSE 300 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale19 covale both ? A MSE 303 C ? ? ? 1_555 A GLU 304 N ? ? A MSE 300 A GLU 301 1_555 ? ? ? ? ? ? ? 1.331 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id HIS _struct_mon_prot_cis.label_seq_id 159 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id HIS _struct_mon_prot_cis.auth_seq_id 156 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 160 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 157 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -11.76 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 5 ? C ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 146 ? GLU A 149 ? VAL A 143 GLU A 146 A 2 THR A 152 ? PHE A 157 ? THR A 149 PHE A 154 A 3 ARG A 163 ? THR A 168 ? ARG A 160 THR A 165 A 4 VAL A 119 ? ALA A 124 ? VAL A 116 ALA A 121 A 5 THR A 23 ? THR A 26 ? THR A 20 THR A 23 A 6 GLU A 185 ? ASN A 188 ? GLU A 182 ASN A 185 B 1 LEU A 61 ? CYS A 66 ? LEU A 58 CYS A 63 B 2 MSE A 72 ? ASP A 81 ? MSE A 69 ASP A 78 B 3 GLY A 84 ? ARG A 90 ? GLY A 81 ARG A 87 B 4 TRP A 30 ? THR A 36 ? TRP A 27 THR A 33 B 5 THR A 111 ? ASP A 115 ? THR A 108 ASP A 112 C 1 THR A 281 ? LYS A 287 ? THR A 278 LYS A 284 C 2 GLN A 292 ? ASN A 300 ? GLN A 289 ASN A 297 C 3 ARG A 249 ? SER A 257 ? ARG A 246 SER A 254 C 4 HIS A 319 ? GLU A 321 ? HIS A 316 GLU A 318 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 147 ? N VAL A 144 O LEU A 154 ? O LEU A 151 A 2 3 N THR A 153 ? N THR A 150 O VAL A 167 ? O VAL A 164 A 3 4 O THR A 168 ? O THR A 165 N VAL A 119 ? N VAL A 116 A 4 5 O GLY A 122 ? O GLY A 119 N MSE A 25 ? N MSE A 22 A 5 6 N LEU A 24 ? N LEU A 21 O GLU A 185 ? O GLU A 182 B 1 2 N HIS A 65 ? N HIS A 62 O TRP A 73 ? O TRP A 70 B 2 3 N PHE A 79 ? N PHE A 76 O ALA A 86 ? O ALA A 83 B 3 4 O GLU A 89 ? O GLU A 86 N ALA A 31 ? N ALA A 28 B 4 5 N THR A 36 ? N THR A 33 O THR A 111 ? O THR A 108 C 1 2 N ALA A 284 ? N ALA A 281 O GLN A 296 ? O GLN A 293 C 2 3 O VAL A 297 ? O VAL A 294 N TRP A 252 ? N TRP A 249 C 3 4 N LEU A 253 ? N LEU A 250 O GLU A 321 ? O GLU A 318 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SO4 400 ? 7 'BINDING SITE FOR RESIDUE SO4 A 400' AC2 Software A SO4 401 ? 3 'BINDING SITE FOR RESIDUE SO4 A 401' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 TRP A 30 ? TRP A 27 . ? 1_555 ? 2 AC1 7 ARG A 77 ? ARG A 74 . ? 1_555 ? 3 AC1 7 PHE A 157 ? PHE A 154 . ? 1_555 ? 4 AC1 7 LEU A 165 ? LEU A 162 . ? 1_555 ? 5 AC1 7 TRP A 192 ? TRP A 189 . ? 1_555 ? 6 AC1 7 ASN A 196 ? ASN A 193 . ? 1_555 ? 7 AC1 7 HOH D . ? HOH A 416 . ? 1_555 ? 8 AC2 3 GLY A 82 ? GLY A 79 . ? 1_555 ? 9 AC2 3 LYS A 148 ? LYS A 145 . ? 1_555 ? 10 AC2 3 HOH D . ? HOH A 497 . ? 1_555 ? # _database_PDB_matrix.entry_id 1NRK _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1NRK _atom_sites.fract_transf_matrix[1][1] 0.006623 _atom_sites.fract_transf_matrix[1][2] 0.003824 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.007647 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014706 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -2 ? ? ? A . n A 1 2 SER 2 -1 ? ? ? A . n A 1 3 HIS 3 0 ? ? ? A . n A 1 4 MSE 4 1 1 MSE MSE A . n A 1 5 ALA 5 2 2 ALA ALA A . n A 1 6 PHE 6 3 3 PHE PHE A . n A 1 7 THR 7 4 4 THR THR A . n A 1 8 PRO 8 5 5 PRO PRO A . n A 1 9 PHE 9 6 6 PHE PHE A . n A 1 10 PRO 10 7 7 PRO PRO A . n A 1 11 PRO 11 8 8 PRO PRO A . n A 1 12 ARG 12 9 9 ARG ARG A . n A 1 13 GLN 13 10 10 GLN GLN A . n A 1 14 PRO 14 11 11 PRO PRO A . n A 1 15 THR 15 12 12 THR THR A . n A 1 16 ALA 16 13 13 ALA ALA A . n A 1 17 SER 17 14 14 SER SER A . n A 1 18 ALA 18 15 15 ALA ALA A . n A 1 19 ARG 19 16 16 ARG ARG A . n A 1 20 LEU 20 17 17 LEU LEU A . n A 1 21 PRO 21 18 18 PRO PRO A . n A 1 22 LEU 22 19 19 LEU LEU A . n A 1 23 THR 23 20 20 THR THR A . n A 1 24 LEU 24 21 21 LEU LEU A . n A 1 25 MSE 25 22 22 MSE MSE A . n A 1 26 THR 26 23 23 THR THR A . n A 1 27 LEU 27 24 24 LEU LEU A . n A 1 28 ASP 28 25 25 ASP ASP A . n A 1 29 ASP 29 26 26 ASP ASP A . n A 1 30 TRP 30 27 27 TRP TRP A . n A 1 31 ALA 31 28 28 ALA ALA A . n A 1 32 LEU 32 29 29 LEU LEU A . n A 1 33 ALA 33 30 30 ALA ALA A . n A 1 34 THR 34 31 31 THR THR A . n A 1 35 ILE 35 32 32 ILE ILE A . n A 1 36 THR 36 33 33 THR THR A . n A 1 37 GLY 37 34 34 GLY GLY A . n A 1 38 ALA 38 35 35 ALA ALA A . n A 1 39 ASP 39 36 36 ASP ASP A . n A 1 40 SER 40 37 37 SER SER A . n A 1 41 GLU 41 38 38 GLU GLU A . n A 1 42 LYS 42 39 39 LYS LYS A . n A 1 43 TYR 43 40 40 TYR TYR A . n A 1 44 MSE 44 41 41 MSE MSE A . n A 1 45 GLN 45 42 42 GLN GLN A . n A 1 46 GLY 46 43 43 GLY GLY A . n A 1 47 GLN 47 44 44 GLN GLN A . n A 1 48 VAL 48 45 45 VAL VAL A . n A 1 49 THR 49 46 46 THR THR A . n A 1 50 ALA 50 47 47 ALA ALA A . n A 1 51 ASP 51 48 48 ASP ASP A . n A 1 52 VAL 52 49 49 VAL VAL A . n A 1 53 SER 53 50 50 SER SER A . n A 1 54 GLN 54 51 51 GLN GLN A . n A 1 55 MSE 55 52 52 MSE MSE A . n A 1 56 ALA 56 53 53 ALA ALA A . n A 1 57 GLU 57 54 54 GLU GLU A . n A 1 58 ASP 58 55 55 ASP ASP A . n A 1 59 GLN 59 56 56 GLN GLN A . n A 1 60 HIS 60 57 57 HIS HIS A . n A 1 61 LEU 61 58 58 LEU LEU A . n A 1 62 LEU 62 59 59 LEU LEU A . n A 1 63 ALA 63 60 60 ALA ALA A . n A 1 64 ALA 64 61 61 ALA ALA A . n A 1 65 HIS 65 62 62 HIS HIS A . n A 1 66 CYS 66 63 63 CYS CYS A . n A 1 67 ASP 67 64 64 ASP ASP A . n A 1 68 ALA 68 65 65 ALA ALA A . n A 1 69 LYS 69 66 66 LYS LYS A . n A 1 70 GLY 70 67 67 GLY GLY A . n A 1 71 LYS 71 68 68 LYS LYS A . n A 1 72 MSE 72 69 69 MSE MSE A . n A 1 73 TRP 73 70 70 TRP TRP A . n A 1 74 SER 74 71 71 SER SER A . n A 1 75 ASN 75 72 72 ASN ASN A . n A 1 76 LEU 76 73 73 LEU LEU A . n A 1 77 ARG 77 74 74 ARG ARG A . n A 1 78 LEU 78 75 75 LEU LEU A . n A 1 79 PHE 79 76 76 PHE PHE A . n A 1 80 ARG 80 77 77 ARG ARG A . n A 1 81 ASP 81 78 78 ASP ASP A . n A 1 82 GLY 82 79 79 GLY GLY A . n A 1 83 ASP 83 80 80 ASP ASP A . n A 1 84 GLY 84 81 81 GLY GLY A . n A 1 85 PHE 85 82 82 PHE PHE A . n A 1 86 ALA 86 83 83 ALA ALA A . n A 1 87 TRP 87 84 84 TRP TRP A . n A 1 88 ILE 88 85 85 ILE ILE A . n A 1 89 GLU 89 86 86 GLU GLU A . n A 1 90 ARG 90 87 87 ARG ARG A . n A 1 91 ARG 91 88 88 ARG ARG A . n A 1 92 SER 92 89 89 SER SER A . n A 1 93 VAL 93 90 90 VAL VAL A . n A 1 94 ARG 94 91 91 ARG ARG A . n A 1 95 GLU 95 92 92 GLU GLU A . n A 1 96 PRO 96 93 93 PRO PRO A . n A 1 97 GLN 97 94 94 GLN GLN A . n A 1 98 LEU 98 95 95 LEU LEU A . n A 1 99 THR 99 96 96 THR THR A . n A 1 100 GLU 100 97 97 GLU GLU A . n A 1 101 LEU 101 98 98 LEU LEU A . n A 1 102 LYS 102 99 99 LYS LYS A . n A 1 103 LYS 103 100 100 LYS LYS A . n A 1 104 TYR 104 101 101 TYR TYR A . n A 1 105 ALA 105 102 102 ALA ALA A . n A 1 106 VAL 106 103 103 VAL VAL A . n A 1 107 PHE 107 104 104 PHE PHE A . n A 1 108 SER 108 105 105 SER SER A . n A 1 109 LYS 109 106 106 LYS LYS A . n A 1 110 VAL 110 107 107 VAL VAL A . n A 1 111 THR 111 108 108 THR THR A . n A 1 112 ILE 112 109 109 ILE ILE A . n A 1 113 ALA 113 110 110 ALA ALA A . n A 1 114 PRO 114 111 111 PRO PRO A . n A 1 115 ASP 115 112 112 ASP ASP A . n A 1 116 ASP 116 113 113 ASP ASP A . n A 1 117 GLU 117 114 114 GLU GLU A . n A 1 118 ARG 118 115 115 ARG ARG A . n A 1 119 VAL 119 116 116 VAL VAL A . n A 1 120 LEU 120 117 117 LEU LEU A . n A 1 121 LEU 121 118 118 LEU LEU A . n A 1 122 GLY 122 119 119 GLY GLY A . n A 1 123 VAL 123 120 120 VAL VAL A . n A 1 124 ALA 124 121 121 ALA ALA A . n A 1 125 GLY 125 122 122 GLY GLY A . n A 1 126 PHE 126 123 123 PHE PHE A . n A 1 127 GLN 127 124 124 GLN GLN A . n A 1 128 ALA 128 125 125 ALA ALA A . n A 1 129 ARG 129 126 126 ARG ARG A . n A 1 130 ALA 130 127 127 ALA ALA A . n A 1 131 ALA 131 128 128 ALA ALA A . n A 1 132 LEU 132 129 129 LEU LEU A . n A 1 133 ALA 133 130 130 ALA ALA A . n A 1 134 ASN 134 131 131 ASN ASN A . n A 1 135 LEU 135 132 132 LEU LEU A . n A 1 136 PHE 136 133 133 PHE PHE A . n A 1 137 SER 137 134 134 SER SER A . n A 1 138 GLU 138 135 135 GLU GLU A . n A 1 139 LEU 139 136 136 LEU LEU A . n A 1 140 PRO 140 137 137 PRO PRO A . n A 1 141 SER 141 138 138 SER SER A . n A 1 142 LYS 142 139 139 LYS LYS A . n A 1 143 GLU 143 140 140 GLU GLU A . n A 1 144 LYS 144 141 141 LYS LYS A . n A 1 145 GLN 145 142 142 GLN GLN A . n A 1 146 VAL 146 143 143 VAL VAL A . n A 1 147 VAL 147 144 144 VAL VAL A . n A 1 148 LYS 148 145 145 LYS LYS A . n A 1 149 GLU 149 146 146 GLU GLU A . n A 1 150 GLY 150 147 147 GLY GLY A . n A 1 151 ALA 151 148 148 ALA ALA A . n A 1 152 THR 152 149 149 THR THR A . n A 1 153 THR 153 150 150 THR THR A . n A 1 154 LEU 154 151 151 LEU LEU A . n A 1 155 LEU 155 152 152 LEU LEU A . n A 1 156 TRP 156 153 153 TRP TRP A . n A 1 157 PHE 157 154 154 PHE PHE A . n A 1 158 GLU 158 155 155 GLU GLU A . n A 1 159 HIS 159 156 156 HIS HIS A . n A 1 160 PRO 160 157 157 PRO PRO A . n A 1 161 ALA 161 158 158 ALA ALA A . n A 1 162 GLU 162 159 159 GLU GLU A . n A 1 163 ARG 163 160 160 ARG ARG A . n A 1 164 PHE 164 161 161 PHE PHE A . n A 1 165 LEU 165 162 162 LEU LEU A . n A 1 166 ILE 166 163 163 ILE ILE A . n A 1 167 VAL 167 164 164 VAL VAL A . n A 1 168 THR 168 165 165 THR THR A . n A 1 169 ASP 169 166 166 ASP ASP A . n A 1 170 GLU 170 167 167 GLU GLU A . n A 1 171 ALA 171 168 168 ALA ALA A . n A 1 172 THR 172 169 169 THR THR A . n A 1 173 ALA 173 170 170 ALA ALA A . n A 1 174 ASN 174 171 171 ASN ASN A . n A 1 175 MSE 175 172 172 MSE MSE A . n A 1 176 LEU 176 173 173 LEU LEU A . n A 1 177 THR 177 174 174 THR THR A . n A 1 178 ASP 178 175 175 ASP ASP A . n A 1 179 LYS 179 176 176 LYS LYS A . n A 1 180 LEU 180 177 177 LEU LEU A . n A 1 181 ARG 181 178 178 ARG ARG A . n A 1 182 GLY 182 179 179 GLY GLY A . n A 1 183 GLU 183 180 180 GLU GLU A . n A 1 184 ALA 184 181 181 ALA ALA A . n A 1 185 GLU 185 182 182 GLU GLU A . n A 1 186 LEU 186 183 183 LEU LEU A . n A 1 187 ASN 187 184 184 ASN ASN A . n A 1 188 ASN 188 185 185 ASN ASN A . n A 1 189 SER 189 186 186 SER SER A . n A 1 190 GLN 190 187 187 GLN GLN A . n A 1 191 GLN 191 188 188 GLN GLN A . n A 1 192 TRP 192 189 189 TRP TRP A . n A 1 193 LEU 193 190 190 LEU LEU A . n A 1 194 ALA 194 191 191 ALA ALA A . n A 1 195 LEU 195 192 192 LEU LEU A . n A 1 196 ASN 196 193 193 ASN ASN A . n A 1 197 ILE 197 194 194 ILE ILE A . n A 1 198 GLU 198 195 195 GLU GLU A . n A 1 199 ALA 199 196 196 ALA ALA A . n A 1 200 GLY 200 197 197 GLY GLY A . n A 1 201 PHE 201 198 198 PHE PHE A . n A 1 202 PRO 202 199 199 PRO PRO A . n A 1 203 VAL 203 200 200 VAL VAL A . n A 1 204 ILE 204 201 201 ILE ILE A . n A 1 205 ASP 205 202 202 ASP ASP A . n A 1 206 ALA 206 203 203 ALA ALA A . n A 1 207 ALA 207 204 204 ALA ALA A . n A 1 208 ASN 208 205 205 ASN ASN A . n A 1 209 SER 209 206 206 SER SER A . n A 1 210 GLY 210 207 207 GLY GLY A . n A 1 211 GLN 211 208 208 GLN GLN A . n A 1 212 PHE 212 209 209 PHE PHE A . n A 1 213 ILE 213 210 210 ILE ILE A . n A 1 214 PRO 214 211 211 PRO PRO A . n A 1 215 GLN 215 212 212 GLN GLN A . n A 1 216 ALA 216 213 213 ALA ALA A . n A 1 217 THR 217 214 214 THR THR A . n A 1 218 ASN 218 215 215 ASN ASN A . n A 1 219 LEU 219 216 216 LEU LEU A . n A 1 220 GLN 220 217 217 GLN GLN A . n A 1 221 ALA 221 218 218 ALA ALA A . n A 1 222 LEU 222 219 219 LEU LEU A . n A 1 223 GLY 223 220 220 GLY GLY A . n A 1 224 GLY 224 221 221 GLY GLY A . n A 1 225 ILE 225 222 222 ILE ILE A . n A 1 226 SER 226 223 223 SER SER A . n A 1 227 PHE 227 224 224 PHE PHE A . n A 1 228 LYS 228 225 225 LYS LYS A . n A 1 229 LYS 229 226 226 LYS LYS A . n A 1 230 GLY 230 227 227 GLY GLY A . n A 1 231 CYS 231 228 228 CYS CYS A . n A 1 232 TYR 232 229 229 TYR TYR A . n A 1 233 THR 233 230 230 THR THR A . n A 1 234 GLY 234 231 231 GLY GLY A . n A 1 235 GLN 235 232 232 GLN GLN A . n A 1 236 GLU 236 233 233 GLU GLU A . n A 1 237 MSE 237 234 234 MSE MSE A . n A 1 238 VAL 238 235 235 VAL VAL A . n A 1 239 ALA 239 236 236 ALA ALA A . n A 1 240 ARG 240 237 237 ARG ARG A . n A 1 241 ALA 241 238 238 ALA ALA A . n A 1 242 LYS 242 239 239 LYS LYS A . n A 1 243 PHE 243 240 240 PHE PHE A . n A 1 244 ARG 244 241 241 ARG ARG A . n A 1 245 GLY 245 242 242 GLY GLY A . n A 1 246 ALA 246 243 243 ALA ALA A . n A 1 247 ASN 247 244 244 ASN ASN A . n A 1 248 LYS 248 245 245 LYS LYS A . n A 1 249 ARG 249 246 246 ARG ARG A . n A 1 250 ALA 250 247 247 ALA ALA A . n A 1 251 LEU 251 248 248 LEU LEU A . n A 1 252 TRP 252 249 249 TRP TRP A . n A 1 253 LEU 253 250 250 LEU LEU A . n A 1 254 LEU 254 251 251 LEU LEU A . n A 1 255 ALA 255 252 252 ALA ALA A . n A 1 256 GLY 256 253 253 GLY GLY A . n A 1 257 SER 257 254 254 SER SER A . n A 1 258 ALA 258 255 255 ALA ALA A . n A 1 259 SER 259 256 256 SER SER A . n A 1 260 ARG 260 257 257 ARG ARG A . n A 1 261 LEU 261 258 258 LEU LEU A . n A 1 262 PRO 262 259 259 PRO PRO A . n A 1 263 GLU 263 260 260 GLU GLU A . n A 1 264 ALA 264 261 261 ALA ALA A . n A 1 265 GLY 265 262 262 GLY GLY A . n A 1 266 GLU 266 263 263 GLU GLU A . n A 1 267 ASP 267 264 264 ASP ASP A . n A 1 268 LEU 268 265 265 LEU LEU A . n A 1 269 GLU 269 266 266 GLU GLU A . n A 1 270 LEU 270 267 267 LEU LEU A . n A 1 271 LYS 271 268 268 LYS LYS A . n A 1 272 MSE 272 269 269 MSE MSE A . n A 1 273 GLY 273 270 270 GLY GLY A . n A 1 274 GLU 274 271 271 GLU GLU A . n A 1 275 ASN 275 272 272 ASN ASN A . n A 1 276 TRP 276 273 273 TRP TRP A . n A 1 277 ARG 277 274 274 ARG ARG A . n A 1 278 ARG 278 275 275 ARG ARG A . n A 1 279 THR 279 276 276 THR THR A . n A 1 280 GLY 280 277 277 GLY GLY A . n A 1 281 THR 281 278 278 THR THR A . n A 1 282 VAL 282 279 279 VAL VAL A . n A 1 283 LEU 283 280 280 LEU LEU A . n A 1 284 ALA 284 281 281 ALA ALA A . n A 1 285 ALA 285 282 282 ALA ALA A . n A 1 286 VAL 286 283 283 VAL VAL A . n A 1 287 LYS 287 284 284 LYS LYS A . n A 1 288 LEU 288 285 285 LEU LEU A . n A 1 289 GLU 289 286 286 GLU GLU A . n A 1 290 ASP 290 287 287 ASP ASP A . n A 1 291 GLY 291 288 288 GLY GLY A . n A 1 292 GLN 292 289 289 GLN GLN A . n A 1 293 VAL 293 290 290 VAL VAL A . n A 1 294 VAL 294 291 291 VAL VAL A . n A 1 295 VAL 295 292 292 VAL VAL A . n A 1 296 GLN 296 293 293 GLN GLN A . n A 1 297 VAL 297 294 294 VAL VAL A . n A 1 298 VAL 298 295 295 VAL VAL A . n A 1 299 MSE 299 296 296 MSE MSE A . n A 1 300 ASN 300 297 297 ASN ASN A . n A 1 301 ASN 301 298 298 ASN ASN A . n A 1 302 ASP 302 299 299 ASP ASP A . n A 1 303 MSE 303 300 300 MSE MSE A . n A 1 304 GLU 304 301 301 GLU GLU A . n A 1 305 PRO 305 302 302 PRO PRO A . n A 1 306 ASP 306 303 303 ASP ASP A . n A 1 307 SER 307 304 304 SER SER A . n A 1 308 ILE 308 305 305 ILE ILE A . n A 1 309 PHE 309 306 306 PHE PHE A . n A 1 310 ARG 310 307 307 ARG ARG A . n A 1 311 VAL 311 308 308 VAL VAL A . n A 1 312 ARG 312 309 309 ARG ARG A . n A 1 313 ASP 313 310 310 ASP ASP A . n A 1 314 ASP 314 311 311 ASP ASP A . n A 1 315 ALA 315 312 312 ALA ALA A . n A 1 316 ASN 316 313 313 ASN ASN A . n A 1 317 THR 317 314 314 THR THR A . n A 1 318 LEU 318 315 315 LEU LEU A . n A 1 319 HIS 319 316 316 HIS HIS A . n A 1 320 ILE 320 317 317 ILE ILE A . n A 1 321 GLU 321 318 318 GLU GLU A . n A 1 322 PRO 322 319 319 PRO PRO A . n A 1 323 LEU 323 320 320 LEU LEU A . n A 1 324 PRO 324 321 321 PRO PRO A . n A 1 325 TYR 325 322 322 TYR TYR A . n A 1 326 SER 326 323 323 SER SER A . n A 1 327 LEU 327 324 324 LEU LEU A . n A 1 328 GLU 328 325 325 GLU GLU A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Structure 2 Function Project' _pdbx_SG_project.initial_of_center S2F # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 400 400 SO4 SO4 A . C 2 SO4 1 401 401 SO4 SO4 A . D 3 HOH 1 402 1 HOH HOH A . D 3 HOH 2 403 2 HOH HOH A . D 3 HOH 3 404 3 HOH HOH A . D 3 HOH 4 405 4 HOH HOH A . D 3 HOH 5 406 5 HOH HOH A . D 3 HOH 6 407 6 HOH HOH A . D 3 HOH 7 408 7 HOH HOH A . D 3 HOH 8 409 8 HOH HOH A . D 3 HOH 9 410 9 HOH HOH A . D 3 HOH 10 411 10 HOH HOH A . D 3 HOH 11 412 11 HOH HOH A . D 3 HOH 12 413 12 HOH HOH A . D 3 HOH 13 414 13 HOH HOH A . D 3 HOH 14 415 14 HOH HOH A . D 3 HOH 15 416 15 HOH HOH A . D 3 HOH 16 417 16 HOH HOH A . D 3 HOH 17 418 17 HOH HOH A . D 3 HOH 18 419 18 HOH HOH A . D 3 HOH 19 420 19 HOH HOH A . D 3 HOH 20 421 20 HOH HOH A . D 3 HOH 21 422 21 HOH HOH A . D 3 HOH 22 423 22 HOH HOH A . D 3 HOH 23 424 23 HOH HOH A . D 3 HOH 24 425 24 HOH HOH A . D 3 HOH 25 426 25 HOH HOH A . D 3 HOH 26 427 26 HOH HOH A . D 3 HOH 27 428 27 HOH HOH A . D 3 HOH 28 429 28 HOH HOH A . D 3 HOH 29 430 29 HOH HOH A . D 3 HOH 30 431 30 HOH HOH A . D 3 HOH 31 432 31 HOH HOH A . D 3 HOH 32 433 32 HOH HOH A . D 3 HOH 33 434 33 HOH HOH A . D 3 HOH 34 435 34 HOH HOH A . D 3 HOH 35 436 35 HOH HOH A . D 3 HOH 36 437 36 HOH HOH A . D 3 HOH 37 438 37 HOH HOH A . D 3 HOH 38 439 38 HOH HOH A . D 3 HOH 39 440 39 HOH HOH A . D 3 HOH 40 441 40 HOH HOH A . D 3 HOH 41 442 41 HOH HOH A . D 3 HOH 42 443 42 HOH HOH A . D 3 HOH 43 444 43 HOH HOH A . D 3 HOH 44 445 44 HOH HOH A . D 3 HOH 45 446 45 HOH HOH A . D 3 HOH 46 447 46 HOH HOH A . D 3 HOH 47 448 47 HOH HOH A . D 3 HOH 48 449 48 HOH HOH A . D 3 HOH 49 450 49 HOH HOH A . D 3 HOH 50 451 50 HOH HOH A . D 3 HOH 51 452 51 HOH HOH A . D 3 HOH 52 453 52 HOH HOH A . D 3 HOH 53 454 53 HOH HOH A . D 3 HOH 54 455 54 HOH HOH A . D 3 HOH 55 456 55 HOH HOH A . D 3 HOH 56 457 56 HOH HOH A . D 3 HOH 57 458 57 HOH HOH A . D 3 HOH 58 459 58 HOH HOH A . D 3 HOH 59 460 59 HOH HOH A . D 3 HOH 60 461 60 HOH HOH A . D 3 HOH 61 462 61 HOH HOH A . D 3 HOH 62 463 62 HOH HOH A . D 3 HOH 63 464 63 HOH HOH A . D 3 HOH 64 465 64 HOH HOH A . D 3 HOH 65 466 65 HOH HOH A . D 3 HOH 66 467 66 HOH HOH A . D 3 HOH 67 468 67 HOH HOH A . D 3 HOH 68 469 68 HOH HOH A . D 3 HOH 69 470 69 HOH HOH A . D 3 HOH 70 471 70 HOH HOH A . D 3 HOH 71 472 71 HOH HOH A . D 3 HOH 72 473 72 HOH HOH A . D 3 HOH 73 474 73 HOH HOH A . D 3 HOH 74 475 74 HOH HOH A . D 3 HOH 75 476 75 HOH HOH A . D 3 HOH 76 477 76 HOH HOH A . D 3 HOH 77 478 77 HOH HOH A . D 3 HOH 78 479 78 HOH HOH A . D 3 HOH 79 480 79 HOH HOH A . D 3 HOH 80 481 80 HOH HOH A . D 3 HOH 81 482 81 HOH HOH A . D 3 HOH 82 483 82 HOH HOH A . D 3 HOH 83 484 83 HOH HOH A . D 3 HOH 84 485 84 HOH HOH A . D 3 HOH 85 486 85 HOH HOH A . D 3 HOH 86 487 86 HOH HOH A . D 3 HOH 87 488 87 HOH HOH A . D 3 HOH 88 489 88 HOH HOH A . D 3 HOH 89 490 89 HOH HOH A . D 3 HOH 90 491 90 HOH HOH A . D 3 HOH 91 492 91 HOH HOH A . D 3 HOH 92 493 92 HOH HOH A . D 3 HOH 93 494 93 HOH HOH A . D 3 HOH 94 495 94 HOH HOH A . D 3 HOH 95 496 95 HOH HOH A . D 3 HOH 96 497 96 HOH HOH A . D 3 HOH 97 498 97 HOH HOH A . D 3 HOH 98 499 98 HOH HOH A . D 3 HOH 99 500 99 HOH HOH A . D 3 HOH 100 501 100 HOH HOH A . D 3 HOH 101 502 101 HOH HOH A . D 3 HOH 102 503 102 HOH HOH A . D 3 HOH 103 504 103 HOH HOH A . D 3 HOH 104 505 104 HOH HOH A . D 3 HOH 105 506 105 HOH HOH A . D 3 HOH 106 507 106 HOH HOH A . D 3 HOH 107 508 107 HOH HOH A . D 3 HOH 108 509 108 HOH HOH A . D 3 HOH 109 510 109 HOH HOH A . D 3 HOH 110 511 110 HOH HOH A . D 3 HOH 111 512 111 HOH HOH A . D 3 HOH 112 513 112 HOH HOH A . D 3 HOH 113 514 113 HOH HOH A . D 3 HOH 114 515 114 HOH HOH A . D 3 HOH 115 516 115 HOH HOH A . D 3 HOH 116 517 116 HOH HOH A . D 3 HOH 117 518 117 HOH HOH A . D 3 HOH 118 519 118 HOH HOH A . D 3 HOH 119 520 119 HOH HOH A . D 3 HOH 120 521 120 HOH HOH A . D 3 HOH 121 522 121 HOH HOH A . D 3 HOH 122 523 122 HOH HOH A . D 3 HOH 123 524 123 HOH HOH A . D 3 HOH 124 525 124 HOH HOH A . D 3 HOH 125 526 125 HOH HOH A . D 3 HOH 126 527 126 HOH HOH A . D 3 HOH 127 528 127 HOH HOH A . D 3 HOH 128 529 128 HOH HOH A . D 3 HOH 129 530 129 HOH HOH A . D 3 HOH 130 531 130 HOH HOH A . D 3 HOH 131 532 131 HOH HOH A . D 3 HOH 132 533 132 HOH HOH A . D 3 HOH 133 534 133 HOH HOH A . D 3 HOH 134 535 134 HOH HOH A . D 3 HOH 135 536 135 HOH HOH A . D 3 HOH 136 537 136 HOH HOH A . D 3 HOH 137 538 137 HOH HOH A . D 3 HOH 138 539 138 HOH HOH A . D 3 HOH 139 540 139 HOH HOH A . D 3 HOH 140 541 140 HOH HOH A . D 3 HOH 141 542 141 HOH HOH A . D 3 HOH 142 543 142 HOH HOH A . D 3 HOH 143 544 143 HOH HOH A . D 3 HOH 144 545 144 HOH HOH A . D 3 HOH 145 546 145 HOH HOH A . D 3 HOH 146 547 146 HOH HOH A . D 3 HOH 147 548 147 HOH HOH A . D 3 HOH 148 549 148 HOH HOH A . D 3 HOH 149 550 149 HOH HOH A . D 3 HOH 150 551 150 HOH HOH A . D 3 HOH 151 552 151 HOH HOH A . D 3 HOH 152 553 152 HOH HOH A . D 3 HOH 153 554 153 HOH HOH A . D 3 HOH 154 555 154 HOH HOH A . D 3 HOH 155 556 155 HOH HOH A . D 3 HOH 156 557 156 HOH HOH A . D 3 HOH 157 558 157 HOH HOH A . D 3 HOH 158 559 158 HOH HOH A . D 3 HOH 159 560 159 HOH HOH A . D 3 HOH 160 561 160 HOH HOH A . D 3 HOH 161 562 161 HOH HOH A . D 3 HOH 162 563 162 HOH HOH A . D 3 HOH 163 564 163 HOH HOH A . D 3 HOH 164 565 164 HOH HOH A . D 3 HOH 165 566 165 HOH HOH A . D 3 HOH 166 567 166 HOH HOH A . D 3 HOH 167 568 167 HOH HOH A . D 3 HOH 168 569 168 HOH HOH A . D 3 HOH 169 570 169 HOH HOH A . D 3 HOH 170 571 170 HOH HOH A . D 3 HOH 171 572 171 HOH HOH A . D 3 HOH 172 573 172 HOH HOH A . D 3 HOH 173 574 173 HOH HOH A . D 3 HOH 174 575 174 HOH HOH A . D 3 HOH 175 576 175 HOH HOH A . D 3 HOH 176 577 176 HOH HOH A . D 3 HOH 177 578 177 HOH HOH A . D 3 HOH 178 579 178 HOH HOH A . D 3 HOH 179 580 179 HOH HOH A . D 3 HOH 180 581 180 HOH HOH A . D 3 HOH 181 582 181 HOH HOH A . D 3 HOH 182 583 182 HOH HOH A . D 3 HOH 183 584 183 HOH HOH A . D 3 HOH 184 585 184 HOH HOH A . D 3 HOH 185 586 185 HOH HOH A . D 3 HOH 186 587 186 HOH HOH A . D 3 HOH 187 588 187 HOH HOH A . D 3 HOH 188 589 188 HOH HOH A . D 3 HOH 189 590 189 HOH HOH A . D 3 HOH 190 591 190 HOH HOH A . D 3 HOH 191 592 191 HOH HOH A . D 3 HOH 192 593 192 HOH HOH A . D 3 HOH 193 594 193 HOH HOH A . D 3 HOH 194 595 194 HOH HOH A . D 3 HOH 195 596 195 HOH HOH A . D 3 HOH 196 597 196 HOH HOH A . D 3 HOH 197 598 197 HOH HOH A . D 3 HOH 198 599 198 HOH HOH A . D 3 HOH 199 600 199 HOH HOH A . D 3 HOH 200 601 200 HOH HOH A . D 3 HOH 201 602 201 HOH HOH A . D 3 HOH 202 603 202 HOH HOH A . D 3 HOH 203 604 203 HOH HOH A . D 3 HOH 204 605 204 HOH HOH A . D 3 HOH 205 606 205 HOH HOH A . D 3 HOH 206 607 206 HOH HOH A . D 3 HOH 207 608 207 HOH HOH A . D 3 HOH 208 609 208 HOH HOH A . D 3 HOH 209 610 209 HOH HOH A . D 3 HOH 210 611 210 HOH HOH A . D 3 HOH 211 612 211 HOH HOH A . D 3 HOH 212 613 212 HOH HOH A . D 3 HOH 213 614 213 HOH HOH A . D 3 HOH 214 615 214 HOH HOH A . D 3 HOH 215 616 215 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 4 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 25 A MSE 22 ? MET SELENOMETHIONINE 3 A MSE 44 A MSE 41 ? MET SELENOMETHIONINE 4 A MSE 55 A MSE 52 ? MET SELENOMETHIONINE 5 A MSE 72 A MSE 69 ? MET SELENOMETHIONINE 6 A MSE 175 A MSE 172 ? MET SELENOMETHIONINE 7 A MSE 237 A MSE 234 ? MET SELENOMETHIONINE 8 A MSE 272 A MSE 269 ? MET SELENOMETHIONINE 9 A MSE 299 A MSE 296 ? MET SELENOMETHIONINE 10 A MSE 303 A MSE 300 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-03-09 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-12-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' struct_conn 3 4 'Structure model' struct_ref_seq_dif 4 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 4 'Structure model' '_struct_ref_seq_dif.details' 5 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.1.24 ? 1 HKL-2000 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 MLPHARE phasing . ? 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OE1 A GLU 86 ? ? NE2 A GLN 94 ? ? 1.94 2 1 O A GLU 301 ? ? N A ASP 303 ? ? 2.02 3 1 O A LYS 268 ? ? ND2 A ASN 272 ? ? 2.17 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A ASP 25 ? ? CG A ASP 25 ? ? OD2 A ASP 25 ? ? 126.48 118.30 8.18 0.90 N 2 1 CB A ASP 112 ? ? CG A ASP 112 ? ? OD2 A ASP 112 ? ? 124.43 118.30 6.13 0.90 N 3 1 CB A ASP 113 ? ? CG A ASP 113 ? ? OD2 A ASP 113 ? ? 124.61 118.30 6.31 0.90 N 4 1 NE A ARG 126 ? ? CZ A ARG 126 ? ? NH2 A ARG 126 ? ? 116.70 120.30 -3.60 0.50 N 5 1 CB A ASP 166 ? ? CA A ASP 166 ? ? C A ASP 166 ? ? 96.89 110.40 -13.51 2.00 N 6 1 CB A ASP 175 ? ? CG A ASP 175 ? ? OD2 A ASP 175 ? ? 124.36 118.30 6.06 0.90 N 7 1 CA A LEU 248 ? ? CB A LEU 248 ? ? CG A LEU 248 ? ? 132.27 115.30 16.97 2.30 N 8 1 CB A ASP 264 ? ? CG A ASP 264 ? ? OD2 A ASP 264 ? ? 123.73 118.30 5.43 0.90 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 12 ? ? -106.90 -166.16 2 1 LEU A 24 ? ? -99.00 56.73 3 1 ASP A 26 ? ? -69.40 3.40 4 1 LEU A 59 ? ? -104.53 75.82 5 1 SER A 71 ? ? 168.12 158.74 6 1 SER A 89 ? ? -62.63 0.03 7 1 VAL A 90 ? ? -140.94 -15.41 8 1 PHE A 123 ? ? -40.10 -79.84 9 1 GLN A 124 ? ? -116.47 56.10 10 1 ALA A 158 ? ? -161.16 -8.02 11 1 GLU A 159 ? ? 112.48 111.09 12 1 ASN A 185 ? ? -119.23 -160.81 13 1 THR A 214 ? ? -145.55 -2.02 14 1 ASN A 215 ? ? 81.02 12.29 15 1 CYS A 228 ? ? 171.66 132.35 16 1 ALA A 243 ? ? -55.29 106.61 17 1 LYS A 245 ? ? -30.14 -94.27 18 1 ARG A 246 ? ? -134.17 -153.37 19 1 ALA A 255 ? ? -172.61 148.99 20 1 MSE A 269 ? ? -64.74 35.02 21 1 GLU A 271 ? ? -150.19 16.65 22 1 TRP A 273 ? ? -52.97 -157.63 23 1 ARG A 274 ? ? -127.89 -96.15 24 1 THR A 276 ? ? -104.76 -86.42 25 1 GLU A 286 ? ? -56.93 -70.23 26 1 ASP A 287 ? ? -12.72 -60.05 27 1 MSE A 300 ? ? -179.69 149.60 28 1 PRO A 302 ? ? -49.17 39.59 29 1 ASP A 303 ? ? -131.48 -45.28 30 1 ARG A 307 ? ? -173.87 127.23 31 1 VAL A 308 ? ? -34.23 138.85 32 1 ALA A 312 ? ? -154.49 66.84 33 1 THR A 314 ? ? -59.09 89.17 34 1 HIS A 316 ? ? -115.70 -157.92 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -2 ? A GLY 1 2 1 Y 1 A SER -1 ? A SER 2 3 1 Y 1 A HIS 0 ? A HIS 3 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 water HOH #