data_1NSO # _entry.id 1NSO # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.352 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1NSO pdb_00001nso 10.2210/pdb1nso/pdb RCSB RCSB018165 ? ? WWPDB D_1000018165 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1NSO _pdbx_database_status.recvd_initial_deposition_date 2003-01-28 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Veverka, V.' 1 'Bauerova, H.' 2 'Zabransky, A.' 3 'Lang, J.' 4 'Ruml, T.' 5 'Pichova, I.' 6 'Hrabal, R.' 7 # _citation.id primary _citation.title 'Three-dimensional structure of a monomeric form of a retroviral protease' _citation.journal_abbrev J.MOL.BIOL. _citation.journal_volume 333 _citation.page_first 771 _citation.page_last 780 _citation.year 2003 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 14568536 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2003.08.049 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Veverka, V.' 1 ? primary 'Bauerova, H.' 2 ? primary 'Zabransky, A.' 3 ? primary 'Lang, J.' 4 ? primary 'Ruml, T.' 5 ? primary 'Pichova, I.' 6 ? primary 'Hrabal, R.' 7 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Protease 13 kDa' _entity.formula_weight 12189.059 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec 3.4.23.- _entity.pdbx_mutation 'C7A, C106A, D26N' _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;WVQPITAQKPSLTLWLDDKMFTGLINTGADVTIIKLEDWPPNWPITDTLTNLRGIGQSNNPKQSSKYLTWRDKENNSGLI KPFVIPNLPVNLWGRDLLSQMKIMMAS ; _entity_poly.pdbx_seq_one_letter_code_can ;WVQPITAQKPSLTLWLDDKMFTGLINTGADVTIIKLEDWPPNWPITDTLTNLRGIGQSNNPKQSSKYLTWRDKENNSGLI KPFVIPNLPVNLWGRDLLSQMKIMMAS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 TRP n 1 2 VAL n 1 3 GLN n 1 4 PRO n 1 5 ILE n 1 6 THR n 1 7 ALA n 1 8 GLN n 1 9 LYS n 1 10 PRO n 1 11 SER n 1 12 LEU n 1 13 THR n 1 14 LEU n 1 15 TRP n 1 16 LEU n 1 17 ASP n 1 18 ASP n 1 19 LYS n 1 20 MET n 1 21 PHE n 1 22 THR n 1 23 GLY n 1 24 LEU n 1 25 ILE n 1 26 ASN n 1 27 THR n 1 28 GLY n 1 29 ALA n 1 30 ASP n 1 31 VAL n 1 32 THR n 1 33 ILE n 1 34 ILE n 1 35 LYS n 1 36 LEU n 1 37 GLU n 1 38 ASP n 1 39 TRP n 1 40 PRO n 1 41 PRO n 1 42 ASN n 1 43 TRP n 1 44 PRO n 1 45 ILE n 1 46 THR n 1 47 ASP n 1 48 THR n 1 49 LEU n 1 50 THR n 1 51 ASN n 1 52 LEU n 1 53 ARG n 1 54 GLY n 1 55 ILE n 1 56 GLY n 1 57 GLN n 1 58 SER n 1 59 ASN n 1 60 ASN n 1 61 PRO n 1 62 LYS n 1 63 GLN n 1 64 SER n 1 65 SER n 1 66 LYS n 1 67 TYR n 1 68 LEU n 1 69 THR n 1 70 TRP n 1 71 ARG n 1 72 ASP n 1 73 LYS n 1 74 GLU n 1 75 ASN n 1 76 ASN n 1 77 SER n 1 78 GLY n 1 79 LEU n 1 80 ILE n 1 81 LYS n 1 82 PRO n 1 83 PHE n 1 84 VAL n 1 85 ILE n 1 86 PRO n 1 87 ASN n 1 88 LEU n 1 89 PRO n 1 90 VAL n 1 91 ASN n 1 92 LEU n 1 93 TRP n 1 94 GLY n 1 95 ARG n 1 96 ASP n 1 97 LEU n 1 98 LEU n 1 99 SER n 1 100 GLN n 1 101 MET n 1 102 LYS n 1 103 ILE n 1 104 MET n 1 105 MET n 1 106 ALA n 1 107 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 107 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Betaretrovirus _entity_src_gen.pdbx_gene_src_gene pol _entity_src_gen.gene_src_species 'Mason-Pfizer monkey virus' _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Simian retrovirus SRV-1' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 11942 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code POL_SRV1 _struct_ref.pdbx_db_accession P04025 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;WVQPITCQKPSLTLWLDDKMFTGLIDTGADVTIIKLEDWPPNWPITDTLTNLRGIGQSNNPKQSSKYLTWRDKENNSGLI KPFVIPNLPVNLWGRDLLSQMKIMMCS ; _struct_ref.pdbx_align_begin 761 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1NSO _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 107 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P04025 _struct_ref_seq.db_align_beg 761 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 867 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 107 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1NSO ALA A 7 ? UNP P04025 CYS 767 'engineered mutation' 7 1 1 1NSO ASN A 26 ? UNP P04025 ASP 786 'engineered mutation' 26 2 1 1NSO ALA A 106 ? UNP P04025 CYS 866 'engineered mutation' 106 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type 1 1 1 3D_13C-separated_NOESY 2 1 1 3D_15N-separated_NOESY 3 1 1 4D_13C/15N-separated_NOESY # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 4.2 _pdbx_nmr_exptl_sample_conditions.ionic_strength '50 mM' _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1mM Protease U-15N,13C; 50mM acetate buffer NA' _pdbx_nmr_sample_details.solvent_system '95% H2O/5% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.field_strength 500 # _pdbx_nmr_refine.entry_id 1NSO _pdbx_nmr_refine.method 'torsion angle dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_details.entry_id 1NSO _pdbx_nmr_details.text 'The structure was determined using triple-resonance NMR spectroscopy.' # _pdbx_nmr_ensemble.entry_id 1NSO _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1NSO _pdbx_nmr_representative.conformer_id 4 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.classification _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal XwinNMR 3.1 collection Bruker 1 NMRPipe 2.1 processing 'Delaglio, F.' 2 Sparky 3.106 'data analysis' 'Goddard, T.D., Kneller, D.G.' 3 ARIA 1.1 'structure solution' ;Linge, J., O'Donoghue, S., Nilges, M. ; 4 ARIA 1.1 refinement ;Linge, J., O'Donoghue, S., Nilges, M. ; 5 # _exptl.entry_id 1NSO _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type ? # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _struct.entry_id 1NSO _struct.title 'Folded monomer of protease from Mason-Pfizer monkey virus' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1NSO _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'M-PMV, PROTEASE, VIRUS MATURATION, FOLDED MONOMER, HYDROLASE' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS A 35 ? TRP A 39 ? LYS A 35 TRP A 39 5 ? 5 HELX_P HELX_P2 2 GLY A 94 ? ILE A 103 ? GLY A 94 ILE A 103 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 19 ? GLY A 23 ? LYS A 19 GLY A 23 A 2 LEU A 12 ? LEU A 16 ? LEU A 12 LEU A 16 A 3 LEU A 68 ? ASP A 72 ? LEU A 68 ASP A 72 A 4 ASN A 76 ? ILE A 80 ? ASN A 76 ILE A 80 B 1 LEU A 49 ? LEU A 52 ? LEU A 49 LEU A 52 B 2 GLN A 57 ? ASN A 60 ? GLN A 57 ASN A 60 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O LYS A 19 ? O LYS A 19 N LEU A 16 ? N LEU A 16 A 2 3 N TRP A 15 ? N TRP A 15 O ARG A 71 ? O ARG A 71 A 3 4 N TRP A 70 ? N TRP A 70 O GLY A 78 ? O GLY A 78 B 1 2 N LEU A 49 ? N LEU A 49 O ASN A 60 ? O ASN A 60 # _database_PDB_matrix.entry_id 1NSO _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1NSO _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 TRP 1 1 1 TRP TRP A . n A 1 2 VAL 2 2 2 VAL VAL A . n A 1 3 GLN 3 3 3 GLN GLN A . n A 1 4 PRO 4 4 4 PRO PRO A . n A 1 5 ILE 5 5 5 ILE ILE A . n A 1 6 THR 6 6 6 THR THR A . n A 1 7 ALA 7 7 7 ALA ALA A . n A 1 8 GLN 8 8 8 GLN GLN A . n A 1 9 LYS 9 9 9 LYS LYS A . n A 1 10 PRO 10 10 10 PRO PRO A . n A 1 11 SER 11 11 11 SER SER A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 THR 13 13 13 THR THR A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 TRP 15 15 15 TRP TRP A . n A 1 16 LEU 16 16 16 LEU LEU A . n A 1 17 ASP 17 17 17 ASP ASP A . n A 1 18 ASP 18 18 18 ASP ASP A . n A 1 19 LYS 19 19 19 LYS LYS A . n A 1 20 MET 20 20 20 MET MET A . n A 1 21 PHE 21 21 21 PHE PHE A . n A 1 22 THR 22 22 22 THR THR A . n A 1 23 GLY 23 23 23 GLY GLY A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 ILE 25 25 25 ILE ILE A . n A 1 26 ASN 26 26 26 ASN ASN A . n A 1 27 THR 27 27 27 THR THR A . n A 1 28 GLY 28 28 28 GLY GLY A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 ASP 30 30 30 ASP ASP A . n A 1 31 VAL 31 31 31 VAL VAL A . n A 1 32 THR 32 32 32 THR THR A . n A 1 33 ILE 33 33 33 ILE ILE A . n A 1 34 ILE 34 34 34 ILE ILE A . n A 1 35 LYS 35 35 35 LYS LYS A . n A 1 36 LEU 36 36 36 LEU LEU A . n A 1 37 GLU 37 37 37 GLU GLU A . n A 1 38 ASP 38 38 38 ASP ASP A . n A 1 39 TRP 39 39 39 TRP TRP A . n A 1 40 PRO 40 40 40 PRO PRO A . n A 1 41 PRO 41 41 41 PRO PRO A . n A 1 42 ASN 42 42 42 ASN ASN A . n A 1 43 TRP 43 43 43 TRP TRP A . n A 1 44 PRO 44 44 44 PRO PRO A . n A 1 45 ILE 45 45 45 ILE ILE A . n A 1 46 THR 46 46 46 THR THR A . n A 1 47 ASP 47 47 47 ASP ASP A . n A 1 48 THR 48 48 48 THR THR A . n A 1 49 LEU 49 49 49 LEU LEU A . n A 1 50 THR 50 50 50 THR THR A . n A 1 51 ASN 51 51 51 ASN ASN A . n A 1 52 LEU 52 52 52 LEU LEU A . n A 1 53 ARG 53 53 53 ARG ARG A . n A 1 54 GLY 54 54 54 GLY GLY A . n A 1 55 ILE 55 55 55 ILE ILE A . n A 1 56 GLY 56 56 56 GLY GLY A . n A 1 57 GLN 57 57 57 GLN GLN A . n A 1 58 SER 58 58 58 SER SER A . n A 1 59 ASN 59 59 59 ASN ASN A . n A 1 60 ASN 60 60 60 ASN ASN A . n A 1 61 PRO 61 61 61 PRO PRO A . n A 1 62 LYS 62 62 62 LYS LYS A . n A 1 63 GLN 63 63 63 GLN GLN A . n A 1 64 SER 64 64 64 SER SER A . n A 1 65 SER 65 65 65 SER SER A . n A 1 66 LYS 66 66 66 LYS LYS A . n A 1 67 TYR 67 67 67 TYR TYR A . n A 1 68 LEU 68 68 68 LEU LEU A . n A 1 69 THR 69 69 69 THR THR A . n A 1 70 TRP 70 70 70 TRP TRP A . n A 1 71 ARG 71 71 71 ARG ARG A . n A 1 72 ASP 72 72 72 ASP ASP A . n A 1 73 LYS 73 73 73 LYS LYS A . n A 1 74 GLU 74 74 74 GLU GLU A . n A 1 75 ASN 75 75 75 ASN ASN A . n A 1 76 ASN 76 76 76 ASN ASN A . n A 1 77 SER 77 77 77 SER SER A . n A 1 78 GLY 78 78 78 GLY GLY A . n A 1 79 LEU 79 79 79 LEU LEU A . n A 1 80 ILE 80 80 80 ILE ILE A . n A 1 81 LYS 81 81 81 LYS LYS A . n A 1 82 PRO 82 82 82 PRO PRO A . n A 1 83 PHE 83 83 83 PHE PHE A . n A 1 84 VAL 84 84 84 VAL VAL A . n A 1 85 ILE 85 85 85 ILE ILE A . n A 1 86 PRO 86 86 86 PRO PRO A . n A 1 87 ASN 87 87 87 ASN ASN A . n A 1 88 LEU 88 88 88 LEU LEU A . n A 1 89 PRO 89 89 89 PRO PRO A . n A 1 90 VAL 90 90 90 VAL VAL A . n A 1 91 ASN 91 91 91 ASN ASN A . n A 1 92 LEU 92 92 92 LEU LEU A . n A 1 93 TRP 93 93 93 TRP TRP A . n A 1 94 GLY 94 94 94 GLY GLY A . n A 1 95 ARG 95 95 95 ARG ARG A . n A 1 96 ASP 96 96 96 ASP ASP A . n A 1 97 LEU 97 97 97 LEU LEU A . n A 1 98 LEU 98 98 98 LEU LEU A . n A 1 99 SER 99 99 99 SER SER A . n A 1 100 GLN 100 100 100 GLN GLN A . n A 1 101 MET 101 101 101 MET MET A . n A 1 102 LYS 102 102 102 LYS LYS A . n A 1 103 ILE 103 103 103 ILE ILE A . n A 1 104 MET 104 104 104 MET MET A . n A 1 105 MET 105 105 105 MET MET A . n A 1 106 ALA 106 106 106 ALA ALA A . n A 1 107 SER 107 107 107 SER SER A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2003-02-18 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2021-10-27 5 'Structure model' 1 4 2021-11-10 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Database references' 7 5 'Structure model' 'Source and taxonomy' 8 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_ref_seq_dif 7 5 'Structure model' entity 8 5 'Structure model' entity_src_gen 9 5 'Structure model' struct_ref 10 5 'Structure model' struct_ref_seq 11 5 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_struct_ref_seq_dif.details' 6 5 'Structure model' '_entity.pdbx_description' 7 5 'Structure model' '_entity_src_gen.pdbx_beg_seq_num' 8 5 'Structure model' '_entity_src_gen.pdbx_end_seq_num' 9 5 'Structure model' '_entity_src_gen.pdbx_gene_src_gene' 10 5 'Structure model' '_entity_src_gen.pdbx_gene_src_scientific_name' 11 5 'Structure model' '_entity_src_gen.pdbx_seq_type' 12 5 'Structure model' '_struct_ref.db_code' 13 5 'Structure model' '_struct_ref.pdbx_align_begin' 14 5 'Structure model' '_struct_ref.pdbx_db_accession' 15 5 'Structure model' '_struct_ref_seq.db_align_beg' 16 5 'Structure model' '_struct_ref_seq.db_align_end' 17 5 'Structure model' '_struct_ref_seq.pdbx_db_accession' 18 5 'Structure model' '_struct_ref_seq_dif.pdbx_seq_db_accession_code' 19 5 'Structure model' '_struct_ref_seq_dif.pdbx_seq_db_seq_num' # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A ASP 47 ? ? HA A LYS 62 ? ? 1.37 2 1 O A ASP 47 ? ? CA A LYS 62 ? ? 2.02 3 1 O A ASP 47 ? ? CB A LYS 62 ? ? 2.18 4 3 O A ASP 47 ? ? HA A LYS 62 ? ? 0.95 5 3 O A ASP 47 ? ? CA A LYS 62 ? ? 1.87 6 5 O A ASP 72 ? ? H A ASN 75 ? ? 1.59 7 6 HG3 A GLN 63 ? ? HA A ILE 85 ? ? 1.11 8 6 OE1 A GLN 63 ? ? O A VAL 84 ? ? 2.15 9 7 O A ASP 47 ? ? HA A LYS 62 ? ? 1.09 10 7 O A ASP 47 ? ? CA A LYS 62 ? ? 2.03 11 8 O A LEU 49 ? ? O A ASN 60 ? ? 2.17 12 9 O A ARG 53 ? ? H A ILE 55 ? ? 1.45 13 9 O A ARG 53 ? ? N A ILE 55 ? ? 2.19 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 7 ? ? 61.38 153.76 2 1 GLN A 8 ? ? -66.90 90.31 3 1 ASP A 17 ? ? 67.06 -66.78 4 1 ASP A 18 ? ? -173.52 34.96 5 1 GLN A 57 ? ? -43.32 93.12 6 1 SER A 64 ? ? -34.50 163.23 7 1 LYS A 66 ? ? -33.97 111.77 8 1 LYS A 73 ? ? -39.78 -27.30 9 1 ASN A 75 ? ? 75.39 45.04 10 1 ASN A 76 ? ? 174.64 140.68 11 1 SER A 77 ? ? -168.73 -47.11 12 1 LEU A 88 ? ? 68.36 84.61 13 1 PRO A 89 ? ? -77.25 29.61 14 1 ASN A 91 ? ? 40.61 90.33 15 1 LYS A 102 ? ? 179.04 49.75 16 1 MET A 105 ? ? -65.40 72.97 17 2 ALA A 7 ? ? 60.68 -171.19 18 2 ASP A 17 ? ? 24.07 34.30 19 2 ASP A 18 ? ? 167.97 -47.80 20 2 ASP A 30 ? ? -147.45 -36.70 21 2 LYS A 35 ? ? -46.61 162.94 22 2 PRO A 40 ? ? -53.50 107.85 23 2 THR A 46 ? ? -65.99 -179.78 24 2 ASP A 47 ? ? 148.56 -58.73 25 2 GLN A 57 ? ? -42.81 93.44 26 2 LYS A 66 ? ? -18.79 119.77 27 2 LYS A 73 ? ? -36.69 -30.20 28 2 ASN A 76 ? ? 177.88 144.32 29 2 SER A 77 ? ? 177.53 -45.64 30 2 PRO A 86 ? ? -86.09 48.29 31 2 ASN A 87 ? ? -144.99 13.67 32 2 LEU A 88 ? ? 66.17 78.53 33 2 PRO A 89 ? ? -69.20 9.18 34 2 VAL A 90 ? ? 95.09 -8.01 35 2 ASN A 91 ? ? 54.71 86.53 36 2 LYS A 102 ? ? -147.10 -29.79 37 2 ILE A 103 ? ? -76.36 -87.41 38 2 MET A 105 ? ? -62.29 81.61 39 3 ALA A 7 ? ? 61.74 -178.53 40 3 GLN A 57 ? ? -41.41 94.20 41 3 SER A 64 ? ? -27.67 154.77 42 3 LYS A 66 ? ? -31.59 146.22 43 3 LYS A 73 ? ? -35.50 -33.31 44 3 SER A 77 ? ? -174.21 -68.06 45 3 PRO A 86 ? ? -83.75 43.41 46 3 LEU A 88 ? ? 65.69 86.03 47 3 PRO A 89 ? ? -77.87 27.13 48 3 MET A 104 ? ? -63.81 -174.82 49 3 MET A 105 ? ? -67.80 72.73 50 4 ALA A 7 ? ? 60.51 -162.08 51 4 PRO A 10 ? ? -68.41 60.29 52 4 ASP A 30 ? ? -156.28 12.56 53 4 LYS A 35 ? ? -49.80 163.24 54 4 THR A 46 ? ? -65.89 -179.83 55 4 ASP A 47 ? ? 173.40 -48.97 56 4 GLN A 57 ? ? -47.37 95.91 57 4 ASN A 60 ? ? -68.23 -179.90 58 4 LYS A 66 ? ? -22.98 114.52 59 4 LYS A 73 ? ? -38.57 -29.13 60 4 ASN A 76 ? ? -175.45 145.34 61 4 SER A 77 ? ? 179.98 -43.33 62 4 PRO A 86 ? ? -81.97 35.83 63 4 LEU A 88 ? ? 66.56 81.40 64 4 PRO A 89 ? ? -77.97 22.23 65 4 ASN A 91 ? ? 44.67 90.50 66 4 LYS A 102 ? ? -178.07 42.01 67 4 MET A 105 ? ? -65.67 76.99 68 5 ALA A 7 ? ? 62.77 130.33 69 5 GLN A 8 ? ? -67.26 90.19 70 5 ASP A 17 ? ? 63.85 -67.90 71 5 ASP A 18 ? ? -179.52 41.65 72 5 LYS A 19 ? ? -170.13 148.58 73 5 THR A 27 ? ? -54.99 -9.98 74 5 LYS A 35 ? ? -48.02 163.24 75 5 GLN A 57 ? ? -47.79 90.40 76 5 SER A 64 ? ? -27.02 164.19 77 5 LYS A 66 ? ? -22.40 121.63 78 5 ASN A 75 ? ? 76.79 44.31 79 5 ASN A 76 ? ? 173.89 150.36 80 5 SER A 77 ? ? -173.11 -61.83 81 5 LEU A 88 ? ? 66.49 79.50 82 5 PRO A 89 ? ? -79.07 23.81 83 5 ASN A 91 ? ? 44.97 81.09 84 5 LYS A 102 ? ? -169.77 39.29 85 5 MET A 104 ? ? -52.08 175.55 86 6 ALA A 7 ? ? 62.68 -163.12 87 6 PRO A 10 ? ? -70.92 48.80 88 6 ASP A 18 ? ? 78.10 41.17 89 6 ASP A 30 ? ? -131.92 -43.56 90 6 PRO A 40 ? ? -56.15 109.24 91 6 GLN A 57 ? ? -44.28 92.49 92 6 PRO A 61 ? ? -32.33 179.47 93 6 LYS A 66 ? ? -12.23 111.73 94 6 ASN A 75 ? ? 70.14 44.52 95 6 ASN A 76 ? ? -176.05 144.35 96 6 SER A 77 ? ? 176.94 -51.71 97 6 PRO A 86 ? ? -83.09 43.60 98 6 LEU A 88 ? ? 68.18 81.25 99 6 PRO A 89 ? ? -78.27 21.73 100 6 LYS A 102 ? ? -177.66 34.96 101 6 MET A 105 ? ? -62.30 97.22 102 7 PRO A 4 ? ? -58.61 98.05 103 7 ALA A 7 ? ? 64.52 -175.40 104 7 PRO A 10 ? ? -82.46 47.63 105 7 ASP A 30 ? ? -132.40 -46.57 106 7 THR A 32 ? ? -54.66 102.27 107 7 THR A 48 ? ? -69.51 93.56 108 7 GLN A 57 ? ? -46.34 95.93 109 7 SER A 64 ? ? -103.42 -161.50 110 7 LYS A 66 ? ? 22.36 100.81 111 7 LYS A 73 ? ? -38.40 -29.75 112 7 ASN A 76 ? ? -176.60 136.40 113 7 SER A 77 ? ? -178.08 -47.72 114 7 LEU A 88 ? ? 77.90 70.92 115 7 PRO A 89 ? ? -72.47 25.32 116 7 LYS A 102 ? ? -172.28 33.92 117 7 ILE A 103 ? ? -107.50 -66.14 118 8 PRO A 4 ? ? -52.91 90.13 119 8 ALA A 7 ? ? 61.25 169.27 120 8 GLN A 8 ? ? -61.15 90.29 121 8 PRO A 10 ? ? -84.73 48.43 122 8 ASP A 17 ? ? 64.01 -74.36 123 8 ASP A 18 ? ? -168.10 37.95 124 8 ASP A 30 ? ? -133.07 -44.98 125 8 ASP A 47 ? ? 174.46 -32.54 126 8 GLN A 57 ? ? -56.19 104.44 127 8 LYS A 66 ? ? -15.74 107.77 128 8 SER A 77 ? ? -178.25 -75.21 129 8 PRO A 86 ? ? -81.59 36.52 130 8 LEU A 88 ? ? 77.54 81.66 131 8 VAL A 90 ? ? 83.03 -3.03 132 8 ASN A 91 ? ? 58.45 77.47 133 8 LYS A 102 ? ? -161.69 51.76 134 8 ILE A 103 ? ? -133.15 -73.20 135 9 ALA A 7 ? ? 64.27 127.85 136 9 GLN A 8 ? ? -53.20 99.54 137 9 PRO A 10 ? ? -68.83 57.29 138 9 PHE A 21 ? ? -179.02 143.23 139 9 ASP A 30 ? ? -155.10 11.68 140 9 LYS A 35 ? ? -46.64 163.08 141 9 ASP A 47 ? ? 159.80 -63.75 142 9 ILE A 55 ? ? 47.56 27.08 143 9 LYS A 66 ? ? -30.01 137.75 144 9 LYS A 73 ? ? -37.75 -27.63 145 9 SER A 77 ? ? 174.76 -83.53 146 9 PRO A 86 ? ? -82.71 48.42 147 9 LEU A 88 ? ? 62.07 77.66 148 9 PRO A 89 ? ? -74.38 22.86 149 9 ASN A 91 ? ? 47.37 84.06 150 9 LYS A 102 ? ? -158.87 29.75 151 9 ILE A 103 ? ? -101.22 -68.34 152 9 MET A 105 ? ? -58.62 87.34 153 10 ALA A 7 ? ? 64.50 173.24 154 10 ASP A 17 ? ? 46.97 28.65 155 10 ASP A 18 ? ? 74.45 47.98 156 10 LYS A 35 ? ? -45.59 162.11 157 10 THR A 46 ? ? -65.95 -179.67 158 10 ASP A 47 ? ? 174.59 -16.37 159 10 GLN A 57 ? ? -46.78 100.93 160 10 SER A 64 ? ? -35.94 155.21 161 10 LYS A 66 ? ? -31.51 130.72 162 10 LYS A 73 ? ? -31.17 -33.99 163 10 SER A 77 ? ? 170.65 -74.27 164 10 ASN A 87 ? ? -151.97 11.93 165 10 LEU A 88 ? ? 61.45 80.87 166 10 PRO A 89 ? ? -76.38 21.18 167 10 VAL A 90 ? ? 76.37 -1.68 168 10 ASN A 91 ? ? 52.60 84.48 169 10 LYS A 102 ? ? 178.75 45.40 170 10 MET A 105 ? ? -65.92 75.72 #