data_1OF4 # _entry.id 1OF4 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.329 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1OF4 PDBE EBI-12541 WWPDB D_1290012541 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1OF3 _pdbx_database_related.content_type unspecified _pdbx_database_related.details 'STRUCTURAL AND THERMODYNAMIC DISSECTION OF SPECIFIC MANNAN RECOGNITION BY A CARBOHYDRATE -BINDING MODULE, TMCBM27' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1OF4 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2003-04-07 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Boraston, A.B.' 1 'Revett, T.J.' 2 'Boraston, C.M.' 3 'Nurizzo, D.' 4 'Davies, G.J.' 5 # _citation.id primary _citation.title 'Structural and Thermodynamic Dissection of Specific Mannan Recognition by a Carbohydrate Binding Module, Tmcbm27' _citation.journal_abbrev Structure _citation.journal_volume 11 _citation.page_first 665 _citation.page_last ? _citation.year 2003 _citation.journal_id_ASTM STRUE6 _citation.country UK _citation.journal_id_ISSN 0969-2126 _citation.journal_id_CSD 2005 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12791255 _citation.pdbx_database_id_DOI '10.1016/S0969-2126(03)00100-X' # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Boraston, A.B.' 1 ? primary 'Revett, T.J.' 2 ? primary 'Boraston, C.M.' 3 ? primary 'Nurizzo, D.' 4 ? primary 'Davies, G.J.' 5 ? # _cell.entry_id 1OF4 _cell.length_a 31.913 _cell.length_b 49.567 _cell.length_c 96.922 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1OF4 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man BETA-MANNOSIDASE 20489.016 1 ? ? 'CARBOHYDRATE-BINDING MODULE, RESIDUES 505-680' ? 2 branched man 'beta-D-mannopyranose-(1-4)-beta-D-mannopyranose-(1-4)-beta-D-mannopyranose-(1-4)-beta-D-mannopyranose-(1-4)-beta-D-mannopyranose' 828.719 1 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 2 ? ? ? ? 4 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? 5 water nat water 18.015 108 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name TMCBM27 # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MASNEARYVLAEEVDFSSPEEVKNWWNSGTWQAEFGSPDIEWNGEVGNGALQLNVKLPGKSDWEEVRVARKFERLSECEI LEYDIYIPNVEGLKGRLRPYAVLNPGWVKIGLDMNNANVESAEIITFGGKEYRRFHVRIEFDRTAGVKELHIGVVGDHLR YDGPIFIDNVRLYKRTGGM ; _entity_poly.pdbx_seq_one_letter_code_can ;MASNEARYVLAEEVDFSSPEEVKNWWNSGTWQAEFGSPDIEWNGEVGNGALQLNVKLPGKSDWEEVRVARKFERLSECEI LEYDIYIPNVEGLKGRLRPYAVLNPGWVKIGLDMNNANVESAEIITFGGKEYRRFHVRIEFDRTAGVKELHIGVVGDHLR YDGPIFIDNVRLYKRTGGM ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 SER n 1 4 ASN n 1 5 GLU n 1 6 ALA n 1 7 ARG n 1 8 TYR n 1 9 VAL n 1 10 LEU n 1 11 ALA n 1 12 GLU n 1 13 GLU n 1 14 VAL n 1 15 ASP n 1 16 PHE n 1 17 SER n 1 18 SER n 1 19 PRO n 1 20 GLU n 1 21 GLU n 1 22 VAL n 1 23 LYS n 1 24 ASN n 1 25 TRP n 1 26 TRP n 1 27 ASN n 1 28 SER n 1 29 GLY n 1 30 THR n 1 31 TRP n 1 32 GLN n 1 33 ALA n 1 34 GLU n 1 35 PHE n 1 36 GLY n 1 37 SER n 1 38 PRO n 1 39 ASP n 1 40 ILE n 1 41 GLU n 1 42 TRP n 1 43 ASN n 1 44 GLY n 1 45 GLU n 1 46 VAL n 1 47 GLY n 1 48 ASN n 1 49 GLY n 1 50 ALA n 1 51 LEU n 1 52 GLN n 1 53 LEU n 1 54 ASN n 1 55 VAL n 1 56 LYS n 1 57 LEU n 1 58 PRO n 1 59 GLY n 1 60 LYS n 1 61 SER n 1 62 ASP n 1 63 TRP n 1 64 GLU n 1 65 GLU n 1 66 VAL n 1 67 ARG n 1 68 VAL n 1 69 ALA n 1 70 ARG n 1 71 LYS n 1 72 PHE n 1 73 GLU n 1 74 ARG n 1 75 LEU n 1 76 SER n 1 77 GLU n 1 78 CYS n 1 79 GLU n 1 80 ILE n 1 81 LEU n 1 82 GLU n 1 83 TYR n 1 84 ASP n 1 85 ILE n 1 86 TYR n 1 87 ILE n 1 88 PRO n 1 89 ASN n 1 90 VAL n 1 91 GLU n 1 92 GLY n 1 93 LEU n 1 94 LYS n 1 95 GLY n 1 96 ARG n 1 97 LEU n 1 98 ARG n 1 99 PRO n 1 100 TYR n 1 101 ALA n 1 102 VAL n 1 103 LEU n 1 104 ASN n 1 105 PRO n 1 106 GLY n 1 107 TRP n 1 108 VAL n 1 109 LYS n 1 110 ILE n 1 111 GLY n 1 112 LEU n 1 113 ASP n 1 114 MET n 1 115 ASN n 1 116 ASN n 1 117 ALA n 1 118 ASN n 1 119 VAL n 1 120 GLU n 1 121 SER n 1 122 ALA n 1 123 GLU n 1 124 ILE n 1 125 ILE n 1 126 THR n 1 127 PHE n 1 128 GLY n 1 129 GLY n 1 130 LYS n 1 131 GLU n 1 132 TYR n 1 133 ARG n 1 134 ARG n 1 135 PHE n 1 136 HIS n 1 137 VAL n 1 138 ARG n 1 139 ILE n 1 140 GLU n 1 141 PHE n 1 142 ASP n 1 143 ARG n 1 144 THR n 1 145 ALA n 1 146 GLY n 1 147 VAL n 1 148 LYS n 1 149 GLU n 1 150 LEU n 1 151 HIS n 1 152 ILE n 1 153 GLY n 1 154 VAL n 1 155 VAL n 1 156 GLY n 1 157 ASP n 1 158 HIS n 1 159 LEU n 1 160 ARG n 1 161 TYR n 1 162 ASP n 1 163 GLY n 1 164 PRO n 1 165 ILE n 1 166 PHE n 1 167 ILE n 1 168 ASP n 1 169 ASN n 1 170 VAL n 1 171 ARG n 1 172 LEU n 1 173 TYR n 1 174 LYS n 1 175 ARG n 1 176 THR n 1 177 GLY n 1 178 GLY n 1 179 MET n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain MSB8 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'THERMOTOGA MARITIMA' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 243274 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector 'PET 28' _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'PET 28-TMCBM27' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 PDB 1OF4 1 ? ? 1OF4 ? 2 UNP Q9RIK9 1 ? ? Q9RIK9 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1OF4 A 1 ? 3 ? 1OF4 -2 ? 0 ? -2 0 2 2 1OF4 A 4 ? 179 ? Q9RIK9 505 ? 680 ? 1 176 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BMA 'D-saccharide, beta linking' . beta-D-mannopyranose ? 'C6 H12 O6' 180.156 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1OF4 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.87 _exptl_crystal.density_percent_sol 34.25 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.60 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '1.5 M AMMONIUM SULFATE, 0.1 M NA-ACETATE PH 4.6' # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC CCD' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.934 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID14-1' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID14-1 _diffrn_source.pdbx_wavelength 0.934 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 1OF4 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 40.000 _reflns.d_resolution_high 1.600 _reflns.number_obs 19916 _reflns.number_all ? _reflns.percent_possible_obs 100.0 _reflns.pdbx_Rmerge_I_obs 0.07000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 17.6000 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.000 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.60 _reflns_shell.d_res_low 1.70 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.39100 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 4.600 _reflns_shell.pdbx_redundancy 5.00 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 1OF4 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 19916 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 40.00 _refine.ls_d_res_high 1.60 _refine.ls_percent_reflns_obs 100.0 _refine.ls_R_factor_obs 0.165 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.163 _refine.ls_R_factor_R_free 0.206 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 1078 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.964 _refine.correlation_coeff_Fo_to_Fc_free 0.948 _refine.B_iso_mean 15.18 _refine.aniso_B[1][1] -0.91000 _refine.aniso_B[2][2] 1.12000 _refine.aniso_B[3][3] -0.20000 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.139 _refine.pdbx_overall_ESU_R_Free 0.094 _refine.overall_SU_ML 0.060 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 1.690 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1385 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 69 _refine_hist.number_atoms_solvent 108 _refine_hist.number_atoms_total 1562 _refine_hist.d_res_high 1.60 _refine_hist.d_res_low 40.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.016 0.021 ? 1501 'X-RAY DIFFRACTION' ? r_bond_other_d 0.002 0.020 ? 1329 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.734 1.987 ? 2037 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.861 3.000 ? 3074 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.573 5.000 ? 170 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_chiral_restr 0.104 0.200 ? 225 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.007 0.020 ? 1604 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.003 0.020 ? 310 'X-RAY DIFFRACTION' ? r_nbd_refined 0.200 0.200 ? 205 'X-RAY DIFFRACTION' ? r_nbd_other 0.256 0.200 ? 1517 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other 0.085 0.200 ? 927 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.195 0.200 ? 61 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined 0.062 0.200 ? 5 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.288 0.200 ? 23 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.336 0.200 ? 88 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.146 0.200 ? 12 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.444 1.500 ? 845 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2.292 2.000 ? 1363 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 2.842 3.000 ? 656 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 4.294 4.500 ? 674 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.60 _refine_ls_shell.d_res_low 1.64 _refine_ls_shell.number_reflns_R_work 1431 _refine_ls_shell.R_factor_R_work 0.1590 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.2410 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 75 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 1OF4 _struct.title 'Structural and thermodynamic dissection of specific mannan recognition by a carbohydrate-binding module, TmCBM27' _struct.pdbx_descriptor BETA-MANNOSIDASE _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1OF4 _struct_keywords.pdbx_keywords 'HYDROLASE/CARBOHYDRATE BINDING' _struct_keywords.text ;HYDROLASE/CARBOHYDRATE BINDING, MANNAN BINDING, CARBOHYDRATE BINDING MODULE, POLYSACCHARIDE DEGRADATION, HYDROLASE, HYDROLASE-CARBOHYDRATE BINDING complex ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 5 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 18 ? LYS A 23 ? SER A 15 LYS A 20 5 ? 6 HELX_P HELX_P2 2 GLU A 45 ? GLY A 49 ? GLU A 42 GLY A 46 5 ? 5 HELX_P HELX_P3 3 ARG A 74 ? CYS A 78 ? ARG A 71 CYS A 75 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B BMA . O4 ? ? ? 1_555 B BMA . C1 ? ? B BMA 1 B BMA 2 1_555 ? ? ? ? ? ? ? 1.417 ? ? covale2 covale both ? B BMA . O4 ? ? ? 1_555 B BMA . C1 ? ? B BMA 2 B BMA 3 1_555 ? ? ? ? ? ? ? 1.422 ? ? covale3 covale both ? B BMA . O4 ? ? ? 1_555 B BMA . C1 ? ? B BMA 3 B BMA 4 1_555 ? ? ? ? ? ? ? 1.413 ? ? covale4 covale both ? B BMA . O4 ? ? ? 1_555 B BMA . C1 ? ? B BMA 4 B BMA 5 1_555 ? ? ? ? ? ? ? 1.408 ? ? metalc1 metalc ? ? A ASP 15 O ? ? ? 1_555 E CA . CA ? ? A ASP 12 A CA 1181 1_555 ? ? ? ? ? ? ? 2.337 ? ? metalc2 metalc ? ? A GLY 47 O ? ? ? 1_555 E CA . CA ? ? A GLY 44 A CA 1181 1_555 ? ? ? ? ? ? ? 2.407 ? ? metalc3 metalc ? ? A GLY 49 O ? ? ? 1_555 E CA . CA ? ? A GLY 46 A CA 1181 1_555 ? ? ? ? ? ? ? 2.326 ? ? metalc4 metalc ? ? A ASP 168 OD1 ? ? ? 1_555 E CA . CA ? ? A ASP 165 A CA 1181 1_555 ? ? ? ? ? ? ? 2.477 ? ? metalc5 metalc ? ? A ASP 168 OD2 ? ? ? 1_555 E CA . CA ? ? A ASP 165 A CA 1181 1_555 ? ? ? ? ? ? ? 2.457 ? ? metalc6 metalc ? ? E CA . CA ? ? ? 1_555 F HOH . O ? ? A CA 1181 A HOH 2004 1_555 ? ? ? ? ? ? ? 2.375 ? ? metalc7 metalc ? ? E CA . CA ? ? ? 1_555 F HOH . O ? ? A CA 1181 A HOH 2094 1_555 ? ? ? ? ? ? ? 2.382 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 SER 37 A . ? SER 34 A PRO 38 A ? PRO 35 A 1 4.73 2 ASN 104 A . ? ASN 101 A PRO 105 A ? PRO 102 A 1 -7.02 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 4 ? AB ? 5 ? AC ? 5 ? AD ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? anti-parallel AB 1 2 ? anti-parallel AB 2 3 ? anti-parallel AB 3 4 ? anti-parallel AB 4 5 ? anti-parallel AC 1 2 ? anti-parallel AC 2 3 ? anti-parallel AC 3 4 ? anti-parallel AC 4 5 ? anti-parallel AD 1 2 ? anti-parallel AD 2 3 ? anti-parallel AD 3 4 ? anti-parallel AD 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 TYR A 8 ? VAL A 14 ? TYR A 5 VAL A 11 AA 2 TYR A 161 ? ARG A 175 ? TYR A 158 ARG A 172 AA 3 ALA A 50 ? LEU A 57 ? ALA A 47 LEU A 54 AA 4 GLU A 34 ? ASN A 43 ? GLU A 31 ASN A 40 AB 1 TYR A 8 ? VAL A 14 ? TYR A 5 VAL A 11 AB 2 TYR A 161 ? ARG A 175 ? TYR A 158 ARG A 172 AB 3 ILE A 80 ? PRO A 88 ? ILE A 77 PRO A 85 AB 4 LYS A 130 ? GLU A 140 ? LYS A 127 GLU A 137 AB 5 GLU A 123 ? PHE A 127 ? GLU A 120 PHE A 124 AC 1 TRP A 25 ? TRP A 31 ? TRP A 22 TRP A 28 AC 2 GLU A 64 ? LYS A 71 ? GLU A 61 LYS A 68 AC 3 GLU A 149 ? ASP A 157 ? GLU A 146 ASP A 154 AC 4 ARG A 96 ? LEU A 97 ? ARG A 93 LEU A 94 AC 5 ALA A 117 ? ASN A 118 ? ALA A 114 ASN A 115 AD 1 TRP A 25 ? TRP A 31 ? TRP A 22 TRP A 28 AD 2 GLU A 64 ? LYS A 71 ? GLU A 61 LYS A 68 AD 3 GLU A 149 ? ASP A 157 ? GLU A 146 ASP A 154 AD 4 TYR A 100 ? ASN A 104 ? TYR A 97 ASN A 101 AD 5 VAL A 108 ? ILE A 110 ? VAL A 105 ILE A 107 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N VAL A 14 ? N VAL A 11 O VAL A 170 ? O VAL A 167 AA 2 3 N ILE A 167 ? N ILE A 164 O LEU A 51 ? O LEU A 48 AA 3 4 N LYS A 56 ? N LYS A 53 O GLU A 34 ? O GLU A 31 AB 1 2 N VAL A 14 ? N VAL A 11 O VAL A 170 ? O VAL A 167 AB 2 3 N TYR A 173 ? N TYR A 170 O ILE A 80 ? O ILE A 77 AB 3 4 N ILE A 87 ? N ILE A 84 O ARG A 133 ? O ARG A 130 AB 4 5 N ARG A 134 ? N ARG A 131 O GLU A 123 ? O GLU A 120 AC 1 2 N TRP A 31 ? N TRP A 28 O GLU A 65 ? O GLU A 62 AC 2 3 N ARG A 70 ? N ARG A 67 O LEU A 150 ? O LEU A 147 AC 3 4 N ASP A 157 ? N ASP A 154 O ARG A 96 ? O ARG A 93 AC 4 5 N LEU A 97 ? N LEU A 94 O ALA A 117 ? O ALA A 114 AD 1 2 N TRP A 31 ? N TRP A 28 O GLU A 65 ? O GLU A 62 AD 2 3 N ARG A 70 ? N ARG A 67 O LEU A 150 ? O LEU A 147 AD 3 4 N GLY A 153 ? N GLY A 150 O TYR A 100 ? O TYR A 97 AD 4 5 N LEU A 103 ? N LEU A 100 O VAL A 108 ? O VAL A 105 # _database_PDB_matrix.entry_id 1OF4 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1OF4 _atom_sites.fract_transf_matrix[1][1] 0.031335 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020175 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010317 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -2 ? ? ? A . n A 1 2 ALA 2 -1 ? ? ? A . n A 1 3 SER 3 0 ? ? ? A . n A 1 4 ASN 4 1 ? ? ? A . n A 1 5 GLU 5 2 ? ? ? A . n A 1 6 ALA 6 3 3 ALA ALA A . n A 1 7 ARG 7 4 4 ARG ARG A . n A 1 8 TYR 8 5 5 TYR TYR A . n A 1 9 VAL 9 6 6 VAL VAL A . n A 1 10 LEU 10 7 7 LEU LEU A . n A 1 11 ALA 11 8 8 ALA ALA A . n A 1 12 GLU 12 9 9 GLU GLU A . n A 1 13 GLU 13 10 10 GLU GLU A . n A 1 14 VAL 14 11 11 VAL VAL A . n A 1 15 ASP 15 12 12 ASP ASP A . n A 1 16 PHE 16 13 13 PHE PHE A . n A 1 17 SER 17 14 14 SER SER A . n A 1 18 SER 18 15 15 SER SER A . n A 1 19 PRO 19 16 16 PRO PRO A . n A 1 20 GLU 20 17 17 GLU GLU A . n A 1 21 GLU 21 18 18 GLU GLU A . n A 1 22 VAL 22 19 19 VAL VAL A . n A 1 23 LYS 23 20 20 LYS LYS A . n A 1 24 ASN 24 21 21 ASN ASN A . n A 1 25 TRP 25 22 22 TRP TRP A . n A 1 26 TRP 26 23 23 TRP TRP A . n A 1 27 ASN 27 24 24 ASN ASN A . n A 1 28 SER 28 25 25 SER SER A . n A 1 29 GLY 29 26 26 GLY GLY A . n A 1 30 THR 30 27 27 THR THR A . n A 1 31 TRP 31 28 28 TRP TRP A . n A 1 32 GLN 32 29 29 GLN GLN A . n A 1 33 ALA 33 30 30 ALA ALA A . n A 1 34 GLU 34 31 31 GLU GLU A . n A 1 35 PHE 35 32 32 PHE PHE A . n A 1 36 GLY 36 33 33 GLY GLY A . n A 1 37 SER 37 34 34 SER SER A . n A 1 38 PRO 38 35 35 PRO PRO A . n A 1 39 ASP 39 36 36 ASP ASP A . n A 1 40 ILE 40 37 37 ILE ILE A . n A 1 41 GLU 41 38 38 GLU GLU A . n A 1 42 TRP 42 39 39 TRP TRP A . n A 1 43 ASN 43 40 40 ASN ASN A . n A 1 44 GLY 44 41 41 GLY GLY A . n A 1 45 GLU 45 42 42 GLU GLU A . n A 1 46 VAL 46 43 43 VAL VAL A . n A 1 47 GLY 47 44 44 GLY GLY A . n A 1 48 ASN 48 45 45 ASN ASN A . n A 1 49 GLY 49 46 46 GLY GLY A . n A 1 50 ALA 50 47 47 ALA ALA A . n A 1 51 LEU 51 48 48 LEU LEU A . n A 1 52 GLN 52 49 49 GLN GLN A . n A 1 53 LEU 53 50 50 LEU LEU A . n A 1 54 ASN 54 51 51 ASN ASN A . n A 1 55 VAL 55 52 52 VAL VAL A . n A 1 56 LYS 56 53 53 LYS LYS A . n A 1 57 LEU 57 54 54 LEU LEU A . n A 1 58 PRO 58 55 55 PRO PRO A . n A 1 59 GLY 59 56 56 GLY GLY A . n A 1 60 LYS 60 57 57 LYS LYS A . n A 1 61 SER 61 58 58 SER SER A . n A 1 62 ASP 62 59 59 ASP ASP A . n A 1 63 TRP 63 60 60 TRP TRP A . n A 1 64 GLU 64 61 61 GLU GLU A . n A 1 65 GLU 65 62 62 GLU GLU A . n A 1 66 VAL 66 63 63 VAL VAL A . n A 1 67 ARG 67 64 64 ARG ARG A . n A 1 68 VAL 68 65 65 VAL VAL A . n A 1 69 ALA 69 66 66 ALA ALA A . n A 1 70 ARG 70 67 67 ARG ARG A . n A 1 71 LYS 71 68 68 LYS LYS A . n A 1 72 PHE 72 69 69 PHE PHE A . n A 1 73 GLU 73 70 70 GLU GLU A . n A 1 74 ARG 74 71 71 ARG ARG A . n A 1 75 LEU 75 72 72 LEU LEU A . n A 1 76 SER 76 73 73 SER SER A . n A 1 77 GLU 77 74 74 GLU GLU A . n A 1 78 CYS 78 75 75 CYS CYS A . n A 1 79 GLU 79 76 76 GLU GLU A . n A 1 80 ILE 80 77 77 ILE ILE A . n A 1 81 LEU 81 78 78 LEU LEU A . n A 1 82 GLU 82 79 79 GLU GLU A . n A 1 83 TYR 83 80 80 TYR TYR A . n A 1 84 ASP 84 81 81 ASP ASP A . n A 1 85 ILE 85 82 82 ILE ILE A . n A 1 86 TYR 86 83 83 TYR TYR A . n A 1 87 ILE 87 84 84 ILE ILE A . n A 1 88 PRO 88 85 85 PRO PRO A . n A 1 89 ASN 89 86 86 ASN ASN A . n A 1 90 VAL 90 87 87 VAL VAL A . n A 1 91 GLU 91 88 88 GLU GLU A . n A 1 92 GLY 92 89 89 GLY GLY A . n A 1 93 LEU 93 90 90 LEU LEU A . n A 1 94 LYS 94 91 91 LYS LYS A . n A 1 95 GLY 95 92 92 GLY GLY A . n A 1 96 ARG 96 93 93 ARG ARG A . n A 1 97 LEU 97 94 94 LEU LEU A . n A 1 98 ARG 98 95 95 ARG ARG A . n A 1 99 PRO 99 96 96 PRO PRO A . n A 1 100 TYR 100 97 97 TYR TYR A . n A 1 101 ALA 101 98 98 ALA ALA A . n A 1 102 VAL 102 99 99 VAL VAL A . n A 1 103 LEU 103 100 100 LEU LEU A . n A 1 104 ASN 104 101 101 ASN ASN A . n A 1 105 PRO 105 102 102 PRO PRO A . n A 1 106 GLY 106 103 103 GLY GLY A . n A 1 107 TRP 107 104 104 TRP TRP A . n A 1 108 VAL 108 105 105 VAL VAL A . n A 1 109 LYS 109 106 106 LYS LYS A . n A 1 110 ILE 110 107 107 ILE ILE A . n A 1 111 GLY 111 108 108 GLY GLY A . n A 1 112 LEU 112 109 109 LEU LEU A . n A 1 113 ASP 113 110 110 ASP ASP A . n A 1 114 MET 114 111 111 MET MET A . n A 1 115 ASN 115 112 112 ASN ASN A . n A 1 116 ASN 116 113 113 ASN ASN A . n A 1 117 ALA 117 114 114 ALA ALA A . n A 1 118 ASN 118 115 115 ASN ASN A . n A 1 119 VAL 119 116 116 VAL VAL A . n A 1 120 GLU 120 117 117 GLU GLU A . n A 1 121 SER 121 118 118 SER SER A . n A 1 122 ALA 122 119 119 ALA ALA A . n A 1 123 GLU 123 120 120 GLU GLU A . n A 1 124 ILE 124 121 121 ILE ILE A . n A 1 125 ILE 125 122 122 ILE ILE A . n A 1 126 THR 126 123 123 THR THR A . n A 1 127 PHE 127 124 124 PHE PHE A . n A 1 128 GLY 128 125 125 GLY GLY A . n A 1 129 GLY 129 126 126 GLY GLY A . n A 1 130 LYS 130 127 127 LYS LYS A . n A 1 131 GLU 131 128 128 GLU GLU A . n A 1 132 TYR 132 129 129 TYR TYR A . n A 1 133 ARG 133 130 130 ARG ARG A . n A 1 134 ARG 134 131 131 ARG ARG A . n A 1 135 PHE 135 132 132 PHE PHE A . n A 1 136 HIS 136 133 133 HIS HIS A . n A 1 137 VAL 137 134 134 VAL VAL A . n A 1 138 ARG 138 135 135 ARG ARG A . n A 1 139 ILE 139 136 136 ILE ILE A . n A 1 140 GLU 140 137 137 GLU GLU A . n A 1 141 PHE 141 138 138 PHE PHE A . n A 1 142 ASP 142 139 139 ASP ASP A . n A 1 143 ARG 143 140 140 ARG ARG A . n A 1 144 THR 144 141 141 THR THR A . n A 1 145 ALA 145 142 142 ALA ALA A . n A 1 146 GLY 146 143 143 GLY GLY A . n A 1 147 VAL 147 144 144 VAL VAL A . n A 1 148 LYS 148 145 145 LYS LYS A . n A 1 149 GLU 149 146 146 GLU GLU A . n A 1 150 LEU 150 147 147 LEU LEU A . n A 1 151 HIS 151 148 148 HIS HIS A . n A 1 152 ILE 152 149 149 ILE ILE A . n A 1 153 GLY 153 150 150 GLY GLY A . n A 1 154 VAL 154 151 151 VAL VAL A . n A 1 155 VAL 155 152 152 VAL VAL A . n A 1 156 GLY 156 153 153 GLY GLY A . n A 1 157 ASP 157 154 154 ASP ASP A . n A 1 158 HIS 158 155 155 HIS HIS A . n A 1 159 LEU 159 156 156 LEU LEU A . n A 1 160 ARG 160 157 157 ARG ARG A . n A 1 161 TYR 161 158 158 TYR TYR A . n A 1 162 ASP 162 159 159 ASP ASP A . n A 1 163 GLY 163 160 160 GLY GLY A . n A 1 164 PRO 164 161 161 PRO PRO A . n A 1 165 ILE 165 162 162 ILE ILE A . n A 1 166 PHE 166 163 163 PHE PHE A . n A 1 167 ILE 167 164 164 ILE ILE A . n A 1 168 ASP 168 165 165 ASP ASP A . n A 1 169 ASN 169 166 166 ASN ASN A . n A 1 170 VAL 170 167 167 VAL VAL A . n A 1 171 ARG 171 168 168 ARG ARG A . n A 1 172 LEU 172 169 169 LEU LEU A . n A 1 173 TYR 173 170 170 TYR TYR A . n A 1 174 LYS 174 171 171 LYS LYS A . n A 1 175 ARG 175 172 172 ARG ARG A . n A 1 176 THR 176 173 173 THR THR A . n A 1 177 GLY 177 174 ? ? ? A . n A 1 178 GLY 178 175 ? ? ? A . n A 1 179 MET 179 176 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 GOL 1 1179 1179 GOL GOL A . D 3 GOL 1 1180 1180 GOL GOL A . E 4 CA 1 1181 1181 CA CA A . F 5 HOH 1 2001 2001 HOH HOH A . F 5 HOH 2 2002 2002 HOH HOH A . F 5 HOH 3 2003 2003 HOH HOH A . F 5 HOH 4 2004 2004 HOH HOH A . F 5 HOH 5 2005 2005 HOH HOH A . F 5 HOH 6 2006 2006 HOH HOH A . F 5 HOH 7 2007 2007 HOH HOH A . F 5 HOH 8 2008 2008 HOH HOH A . F 5 HOH 9 2009 2009 HOH HOH A . F 5 HOH 10 2010 2010 HOH HOH A . F 5 HOH 11 2011 2011 HOH HOH A . F 5 HOH 12 2012 2012 HOH HOH A . F 5 HOH 13 2013 2013 HOH HOH A . F 5 HOH 14 2014 2014 HOH HOH A . F 5 HOH 15 2015 2015 HOH HOH A . F 5 HOH 16 2016 2016 HOH HOH A . F 5 HOH 17 2017 2017 HOH HOH A . F 5 HOH 18 2018 2018 HOH HOH A . F 5 HOH 19 2019 2019 HOH HOH A . F 5 HOH 20 2020 2020 HOH HOH A . F 5 HOH 21 2021 2021 HOH HOH A . F 5 HOH 22 2022 2022 HOH HOH A . F 5 HOH 23 2023 2023 HOH HOH A . F 5 HOH 24 2024 2024 HOH HOH A . F 5 HOH 25 2025 2025 HOH HOH A . F 5 HOH 26 2026 2026 HOH HOH A . F 5 HOH 27 2027 2027 HOH HOH A . F 5 HOH 28 2028 2028 HOH HOH A . F 5 HOH 29 2029 2029 HOH HOH A . F 5 HOH 30 2030 2030 HOH HOH A . F 5 HOH 31 2031 2031 HOH HOH A . F 5 HOH 32 2032 2032 HOH HOH A . F 5 HOH 33 2033 2033 HOH HOH A . F 5 HOH 34 2034 2034 HOH HOH A . F 5 HOH 35 2035 2035 HOH HOH A . F 5 HOH 36 2036 2036 HOH HOH A . F 5 HOH 37 2037 2037 HOH HOH A . F 5 HOH 38 2038 2038 HOH HOH A . F 5 HOH 39 2039 2039 HOH HOH A . F 5 HOH 40 2040 2040 HOH HOH A . F 5 HOH 41 2041 2041 HOH HOH A . F 5 HOH 42 2042 2042 HOH HOH A . F 5 HOH 43 2043 2043 HOH HOH A . F 5 HOH 44 2044 2044 HOH HOH A . F 5 HOH 45 2045 2045 HOH HOH A . F 5 HOH 46 2046 2046 HOH HOH A . F 5 HOH 47 2047 2047 HOH HOH A . F 5 HOH 48 2048 2048 HOH HOH A . F 5 HOH 49 2049 2049 HOH HOH A . F 5 HOH 50 2050 2050 HOH HOH A . F 5 HOH 51 2051 2051 HOH HOH A . F 5 HOH 52 2052 2052 HOH HOH A . F 5 HOH 53 2053 2053 HOH HOH A . F 5 HOH 54 2054 2054 HOH HOH A . F 5 HOH 55 2055 2055 HOH HOH A . F 5 HOH 56 2056 2056 HOH HOH A . F 5 HOH 57 2057 2057 HOH HOH A . F 5 HOH 58 2058 2058 HOH HOH A . F 5 HOH 59 2059 2059 HOH HOH A . F 5 HOH 60 2060 2060 HOH HOH A . F 5 HOH 61 2061 2061 HOH HOH A . F 5 HOH 62 2062 2062 HOH HOH A . F 5 HOH 63 2063 2063 HOH HOH A . F 5 HOH 64 2064 2064 HOH HOH A . F 5 HOH 65 2065 2065 HOH HOH A . F 5 HOH 66 2066 2066 HOH HOH A . F 5 HOH 67 2067 2067 HOH HOH A . F 5 HOH 68 2068 2068 HOH HOH A . F 5 HOH 69 2069 2069 HOH HOH A . F 5 HOH 70 2070 2070 HOH HOH A . F 5 HOH 71 2071 2071 HOH HOH A . F 5 HOH 72 2072 2072 HOH HOH A . F 5 HOH 73 2073 2073 HOH HOH A . F 5 HOH 74 2074 2074 HOH HOH A . F 5 HOH 75 2075 2075 HOH HOH A . F 5 HOH 76 2076 2076 HOH HOH A . F 5 HOH 77 2077 2077 HOH HOH A . F 5 HOH 78 2078 2078 HOH HOH A . F 5 HOH 79 2079 2079 HOH HOH A . F 5 HOH 80 2080 2080 HOH HOH A . F 5 HOH 81 2081 2081 HOH HOH A . F 5 HOH 82 2082 2082 HOH HOH A . F 5 HOH 83 2083 2083 HOH HOH A . F 5 HOH 84 2084 2084 HOH HOH A . F 5 HOH 85 2085 2085 HOH HOH A . F 5 HOH 86 2086 2086 HOH HOH A . F 5 HOH 87 2087 2087 HOH HOH A . F 5 HOH 88 2088 2088 HOH HOH A . F 5 HOH 89 2089 2089 HOH HOH A . F 5 HOH 90 2090 2090 HOH HOH A . F 5 HOH 91 2091 2091 HOH HOH A . F 5 HOH 92 2092 2092 HOH HOH A . F 5 HOH 93 2093 2093 HOH HOH A . F 5 HOH 94 2094 2094 HOH HOH A . F 5 HOH 95 2095 2095 HOH HOH A . F 5 HOH 96 2096 2096 HOH HOH A . F 5 HOH 97 2097 2097 HOH HOH A . F 5 HOH 98 2098 2098 HOH HOH A . F 5 HOH 99 2099 2099 HOH HOH A . F 5 HOH 100 2100 2100 HOH HOH A . F 5 HOH 101 2101 2101 HOH HOH A . F 5 HOH 102 2102 2102 HOH HOH A . F 5 HOH 103 2103 2103 HOH HOH A . F 5 HOH 104 2104 2104 HOH HOH A . F 5 HOH 105 2105 2105 HOH HOH A . F 5 HOH 106 2106 2106 HOH HOH A . F 5 HOH 107 2107 2107 HOH HOH A . F 5 HOH 108 2108 2108 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A ASP 15 ? A ASP 12 ? 1_555 CA ? E CA . ? A CA 1181 ? 1_555 O ? A GLY 47 ? A GLY 44 ? 1_555 148.7 ? 2 O ? A ASP 15 ? A ASP 12 ? 1_555 CA ? E CA . ? A CA 1181 ? 1_555 O ? A GLY 49 ? A GLY 46 ? 1_555 82.8 ? 3 O ? A GLY 47 ? A GLY 44 ? 1_555 CA ? E CA . ? A CA 1181 ? 1_555 O ? A GLY 49 ? A GLY 46 ? 1_555 82.3 ? 4 O ? A ASP 15 ? A ASP 12 ? 1_555 CA ? E CA . ? A CA 1181 ? 1_555 OD1 ? A ASP 168 ? A ASP 165 ? 1_555 75.8 ? 5 O ? A GLY 47 ? A GLY 44 ? 1_555 CA ? E CA . ? A CA 1181 ? 1_555 OD1 ? A ASP 168 ? A ASP 165 ? 1_555 131.8 ? 6 O ? A GLY 49 ? A GLY 46 ? 1_555 CA ? E CA . ? A CA 1181 ? 1_555 OD1 ? A ASP 168 ? A ASP 165 ? 1_555 91.0 ? 7 O ? A ASP 15 ? A ASP 12 ? 1_555 CA ? E CA . ? A CA 1181 ? 1_555 OD2 ? A ASP 168 ? A ASP 165 ? 1_555 126.4 ? 8 O ? A GLY 47 ? A GLY 44 ? 1_555 CA ? E CA . ? A CA 1181 ? 1_555 OD2 ? A ASP 168 ? A ASP 165 ? 1_555 80.7 ? 9 O ? A GLY 49 ? A GLY 46 ? 1_555 CA ? E CA . ? A CA 1181 ? 1_555 OD2 ? A ASP 168 ? A ASP 165 ? 1_555 88.9 ? 10 OD1 ? A ASP 168 ? A ASP 165 ? 1_555 CA ? E CA . ? A CA 1181 ? 1_555 OD2 ? A ASP 168 ? A ASP 165 ? 1_555 51.4 ? 11 O ? A ASP 15 ? A ASP 12 ? 1_555 CA ? E CA . ? A CA 1181 ? 1_555 O ? F HOH . ? A HOH 2004 ? 1_555 76.8 ? 12 O ? A GLY 47 ? A GLY 44 ? 1_555 CA ? E CA . ? A CA 1181 ? 1_555 O ? F HOH . ? A HOH 2004 ? 1_555 79.4 ? 13 O ? A GLY 49 ? A GLY 46 ? 1_555 CA ? E CA . ? A CA 1181 ? 1_555 O ? F HOH . ? A HOH 2004 ? 1_555 101.5 ? 14 OD1 ? A ASP 168 ? A ASP 165 ? 1_555 CA ? E CA . ? A CA 1181 ? 1_555 O ? F HOH . ? A HOH 2004 ? 1_555 148.0 ? 15 OD2 ? A ASP 168 ? A ASP 165 ? 1_555 CA ? E CA . ? A CA 1181 ? 1_555 O ? F HOH . ? A HOH 2004 ? 1_555 156.0 ? 16 O ? A ASP 15 ? A ASP 12 ? 1_555 CA ? E CA . ? A CA 1181 ? 1_555 O ? F HOH . ? A HOH 2094 ? 1_555 102.3 ? 17 O ? A GLY 47 ? A GLY 44 ? 1_555 CA ? E CA . ? A CA 1181 ? 1_555 O ? F HOH . ? A HOH 2094 ? 1_555 95.1 ? 18 O ? A GLY 49 ? A GLY 46 ? 1_555 CA ? E CA . ? A CA 1181 ? 1_555 O ? F HOH . ? A HOH 2094 ? 1_555 173.5 ? 19 OD1 ? A ASP 168 ? A ASP 165 ? 1_555 CA ? E CA . ? A CA 1181 ? 1_555 O ? F HOH . ? A HOH 2094 ? 1_555 86.3 ? 20 OD2 ? A ASP 168 ? A ASP 165 ? 1_555 CA ? E CA . ? A CA 1181 ? 1_555 O ? F HOH . ? A HOH 2094 ? 1_555 84.8 ? 21 O ? F HOH . ? A HOH 2004 ? 1_555 CA ? E CA . ? A CA 1181 ? 1_555 O ? F HOH . ? A HOH 2094 ? 1_555 83.8 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2003-04-17 2 'Structure model' 1 1 2011-05-08 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 2 0 2020-07-29 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Atomic model' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' Other 7 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' atom_site 2 4 'Structure model' atom_site_anisotrop 3 4 'Structure model' chem_comp 4 4 'Structure model' entity 5 4 'Structure model' pdbx_branch_scheme 6 4 'Structure model' pdbx_chem_comp_identifier 7 4 'Structure model' pdbx_database_status 8 4 'Structure model' pdbx_entity_branch 9 4 'Structure model' pdbx_entity_branch_descriptor 10 4 'Structure model' pdbx_entity_branch_link 11 4 'Structure model' pdbx_entity_branch_list 12 4 'Structure model' pdbx_entity_nonpoly 13 4 'Structure model' pdbx_nonpoly_scheme 14 4 'Structure model' pdbx_struct_assembly_gen 15 4 'Structure model' pdbx_struct_conn_angle 16 4 'Structure model' struct_asym 17 4 'Structure model' struct_conn 18 4 'Structure model' struct_site 19 4 'Structure model' struct_site_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_atom_site.auth_asym_id' 2 4 'Structure model' '_atom_site.auth_seq_id' 3 4 'Structure model' '_atom_site.label_asym_id' 4 4 'Structure model' '_atom_site_anisotrop.pdbx_auth_asym_id' 5 4 'Structure model' '_atom_site_anisotrop.pdbx_auth_seq_id' 6 4 'Structure model' '_atom_site_anisotrop.pdbx_label_asym_id' 7 4 'Structure model' '_chem_comp.name' 8 4 'Structure model' '_chem_comp.type' 9 4 'Structure model' '_entity.formula_weight' 10 4 'Structure model' '_entity.pdbx_description' 11 4 'Structure model' '_entity.pdbx_number_of_molecules' 12 4 'Structure model' '_entity.type' 13 4 'Structure model' '_pdbx_database_status.status_code_sf' 14 4 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 20 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 21 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 22 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 23 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 24 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 25 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 26 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 27 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 28 4 'Structure model' '_pdbx_struct_conn_angle.value' 29 4 'Structure model' '_struct_conn.pdbx_dist_value' 30 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 31 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 32 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 33 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 34 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 35 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 36 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 37 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 38 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 39 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 40 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 41 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 42 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 43 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 44 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.1.24 ? 1 MOSFLM 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 # _pdbx_database_remark.id 700 _pdbx_database_remark.text ; SHEET THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, TWO SHEETS ARE DEFINED. ; # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OD1 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ASP _pdbx_validate_close_contact.auth_seq_id_1 59 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 2043 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.16 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 4 ? ? CZ A ARG 4 ? ? NH1 A ARG 4 ? ? 123.71 120.30 3.41 0.50 N 2 1 CB A ASP 59 ? ? CG A ASP 59 ? ? OD1 A ASP 59 ? ? 125.51 118.30 7.21 0.90 N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id LYS _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 145 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -141.52 _pdbx_validate_torsion.psi -15.65 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 53 ? NZ ? A LYS 56 NZ 2 1 Y 1 A LYS 91 ? CE ? A LYS 94 CE 3 1 Y 1 A LYS 91 ? NZ ? A LYS 94 NZ 4 1 Y 1 A ARG 140 ? CZ ? A ARG 143 CZ 5 1 Y 1 A ARG 140 ? NH1 ? A ARG 143 NH1 6 1 Y 1 A ARG 140 ? NH2 ? A ARG 143 NH2 7 1 Y 1 A LYS 145 ? CD ? A LYS 148 CD 8 1 Y 1 A LYS 145 ? CE ? A LYS 148 CE 9 1 Y 1 A LYS 145 ? NZ ? A LYS 148 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -2 ? A MET 1 2 1 Y 1 A ALA -1 ? A ALA 2 3 1 Y 1 A SER 0 ? A SER 3 4 1 Y 1 A ASN 1 ? A ASN 4 5 1 Y 1 A GLU 2 ? A GLU 5 6 1 Y 1 A GLY 174 ? A GLY 177 7 1 Y 1 A GLY 175 ? A GLY 178 8 1 Y 1 A MET 176 ? A MET 179 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 BMA 1 B BMA 1 A BMA 1174 n B 2 BMA 2 B BMA 2 A BMA 1175 n B 2 BMA 3 B BMA 3 A BMA 1176 n B 2 BMA 4 B BMA 4 A BMA 1177 n B 2 BMA 5 B BMA 5 A BMA 1178 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BMA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpb BMA 'COMMON NAME' GMML 1.0 b-D-mannopyranose BMA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Manp BMA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DManpb1-4DManpb1-4DManpb1-4DManpb1-4DManpb1-ROH 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/1,5,4/[a1122h-1b_1-5]/1-1-1-1-1/a4-b1_b4-c1_c4-d1_d4-e1' WURCS PDB2Glycan 1.1.0 3 2 '[][b-D-Manp]{[(4+1)][b-D-Manp]{[(4+1)][b-D-Manp]{[(4+1)][b-D-Manp]{[(4+1)][b-D-Manp]{}}}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 2 2 BMA C1 O1 1 BMA O4 HO4 sing ? 2 2 3 BMA C1 O1 2 BMA O4 HO4 sing ? 3 2 4 BMA C1 O1 3 BMA O4 HO4 sing ? 4 2 5 BMA C1 O1 4 BMA O4 HO4 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 BMA 1 n 2 BMA 2 n 2 BMA 3 n 2 BMA 4 n 2 BMA 5 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 GLYCEROL GOL 4 'CALCIUM ION' CA 5 water HOH #