data_1OF9 # _entry.id 1OF9 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1OF9 PDBE EBI-12549 WWPDB D_1290012549 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1OF9 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2003-04-09 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hecht, O.' 1 'Schleinkofer, K.' 2 'Bruhn, H.' 3 'Leippe, M.' 4 'Van Nuland, N.' 5 'Dingley, A.J.' 6 'Grotzinger, J.' 7 # _citation.id primary _citation.title 'Solution Structure of the Pore-Forming Protein of Entamoeba Histolytica' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 279 _citation.page_first 17834 _citation.page_last ? _citation.year 2004 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 14970207 _citation.pdbx_database_id_DOI 10.1074/JBC.M312978200 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Hecht, O.' 1 primary 'Van Nuland, N.' 2 primary 'Schleinkofer, K.' 3 primary 'Dingley, A.J.' 4 primary 'Bruhn, H.' 5 primary 'Leippe, M.' 6 primary 'Grotzinger, J.' 7 # _cell.entry_id 1OF9 _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1OF9 _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # _entity.id 1 _entity.type polymer _entity.src_method nat _entity.pdbx_description 'PORE-FORMING PEPTIDE AMEOBAPORE A' _entity.formula_weight 8253.695 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'AMOEBAPORE A, EH-APP' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GEILCNLCTGLINTLENLLTTKGADKVKDYISSLCNKASGFIATLCTKVLDFGIDKLIQLIEDKVDANAICAKIHAC _entity_poly.pdbx_seq_one_letter_code_can GEILCNLCTGLINTLENLLTTKGADKVKDYISSLCNKASGFIATLCTKVLDFGIDKLIQLIEDKVDANAICAKIHAC _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 GLU n 1 3 ILE n 1 4 LEU n 1 5 CYS n 1 6 ASN n 1 7 LEU n 1 8 CYS n 1 9 THR n 1 10 GLY n 1 11 LEU n 1 12 ILE n 1 13 ASN n 1 14 THR n 1 15 LEU n 1 16 GLU n 1 17 ASN n 1 18 LEU n 1 19 LEU n 1 20 THR n 1 21 THR n 1 22 LYS n 1 23 GLY n 1 24 ALA n 1 25 ASP n 1 26 LYS n 1 27 VAL n 1 28 LYS n 1 29 ASP n 1 30 TYR n 1 31 ILE n 1 32 SER n 1 33 SER n 1 34 LEU n 1 35 CYS n 1 36 ASN n 1 37 LYS n 1 38 ALA n 1 39 SER n 1 40 GLY n 1 41 PHE n 1 42 ILE n 1 43 ALA n 1 44 THR n 1 45 LEU n 1 46 CYS n 1 47 THR n 1 48 LYS n 1 49 VAL n 1 50 LEU n 1 51 ASP n 1 52 PHE n 1 53 GLY n 1 54 ILE n 1 55 ASP n 1 56 LYS n 1 57 LEU n 1 58 ILE n 1 59 GLN n 1 60 LEU n 1 61 ILE n 1 62 GLU n 1 63 ASP n 1 64 LYS n 1 65 VAL n 1 66 ASP n 1 67 ALA n 1 68 ASN n 1 69 ALA n 1 70 ILE n 1 71 CYS n 1 72 ALA n 1 73 LYS n 1 74 ILE n 1 75 HIS n 1 76 ALA n 1 77 CYS n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'ENTAMOEBA HISTOLYTICA' _entity_src_nat.pdbx_ncbi_taxonomy_id 5759 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PFPA_ENTHI _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession P34095 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1OF9 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 77 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P34095 _struct_ref_seq.db_align_beg 22 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 98 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 77 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 NOESY 1 2 1 TOCSY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 297 _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.pressure ? _pdbx_nmr_exptl_sample_conditions.pH 3.5 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model INOVA _pdbx_nmr_spectrometer.manufacturer Varian _pdbx_nmr_spectrometer.field_strength 750 # _pdbx_nmr_refine.entry_id 1OF9 _pdbx_nmr_refine.method 'distance geometry' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_details.entry_id 1OF9 _pdbx_nmr_details.text '2D H1-SPECTROSCOPY' # _pdbx_nmr_ensemble.entry_id 1OF9 _pdbx_nmr_ensemble.conformers_calculated_total_number 75 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'LEAST RESTRAINT VIOLATION' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal refinement DYANA ? GUNTERT,WUTHRICH 1 'structure solution' DYANA ? ? 2 # _exptl.entry_id 1OF9 _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 1OF9 _struct.title 'Solution structure of the pore forming toxin of entamoeba histolytica (Amoebapore A)' _struct.pdbx_descriptor 'PORE-FORMING PEPTIDE AMEOBAPORE A' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1OF9 _struct_keywords.pdbx_keywords TOXIN _struct_keywords.text 'PORE FORMING, TOXIN, SAPLIP, AMOEBAPORE A' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU A 4 ? LEU A 19 ? LEU A 4 LEU A 19 1 ? 16 HELX_P HELX_P2 2 ALA A 24 ? ASN A 36 ? ALA A 24 ASN A 36 1 ? 13 HELX_P HELX_P3 3 ILE A 42 ? GLY A 53 ? ILE A 42 GLY A 53 1 ? 12 HELX_P HELX_P4 4 GLY A 53 ? LYS A 64 ? GLY A 53 LYS A 64 1 ? 12 HELX_P HELX_P5 5 ASP A 66 ? HIS A 75 ? ASP A 66 HIS A 75 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 5 SG ? ? ? 1_555 A CYS 77 SG ? ? A CYS 5 A CYS 77 1_555 ? ? ? ? ? ? ? 2.117 ? disulf2 disulf ? ? A CYS 8 SG ? ? ? 1_555 A CYS 71 SG ? ? A CYS 8 A CYS 71 1_555 ? ? ? ? ? ? ? 2.176 ? disulf3 disulf ? ? A CYS 35 SG ? ? ? 1_555 A CYS 46 SG ? ? A CYS 35 A CYS 46 1_555 ? ? ? ? ? ? ? 2.020 ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _database_PDB_matrix.entry_id 1OF9 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1OF9 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 GLU 2 2 2 GLU GLU A . n A 1 3 ILE 3 3 3 ILE ILE A . n A 1 4 LEU 4 4 4 LEU LEU A . n A 1 5 CYS 5 5 5 CYS CYS A . n A 1 6 ASN 6 6 6 ASN ASN A . n A 1 7 LEU 7 7 7 LEU LEU A . n A 1 8 CYS 8 8 8 CYS CYS A . n A 1 9 THR 9 9 9 THR THR A . n A 1 10 GLY 10 10 10 GLY GLY A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 ILE 12 12 12 ILE ILE A . n A 1 13 ASN 13 13 13 ASN ASN A . n A 1 14 THR 14 14 14 THR THR A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 GLU 16 16 16 GLU GLU A . n A 1 17 ASN 17 17 17 ASN ASN A . n A 1 18 LEU 18 18 18 LEU LEU A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 THR 20 20 20 THR THR A . n A 1 21 THR 21 21 21 THR THR A . n A 1 22 LYS 22 22 22 LYS LYS A . n A 1 23 GLY 23 23 23 GLY GLY A . n A 1 24 ALA 24 24 24 ALA ALA A . n A 1 25 ASP 25 25 25 ASP ASP A . n A 1 26 LYS 26 26 26 LYS LYS A . n A 1 27 VAL 27 27 27 VAL VAL A . n A 1 28 LYS 28 28 28 LYS LYS A . n A 1 29 ASP 29 29 29 ASP ASP A . n A 1 30 TYR 30 30 30 TYR TYR A . n A 1 31 ILE 31 31 31 ILE ILE A . n A 1 32 SER 32 32 32 SER SER A . n A 1 33 SER 33 33 33 SER SER A . n A 1 34 LEU 34 34 34 LEU LEU A . n A 1 35 CYS 35 35 35 CYS CYS A . n A 1 36 ASN 36 36 36 ASN ASN A . n A 1 37 LYS 37 37 37 LYS LYS A . n A 1 38 ALA 38 38 38 ALA ALA A . n A 1 39 SER 39 39 39 SER SER A . n A 1 40 GLY 40 40 40 GLY GLY A . n A 1 41 PHE 41 41 41 PHE PHE A . n A 1 42 ILE 42 42 42 ILE ILE A . n A 1 43 ALA 43 43 43 ALA ALA A . n A 1 44 THR 44 44 44 THR THR A . n A 1 45 LEU 45 45 45 LEU LEU A . n A 1 46 CYS 46 46 46 CYS CYS A . n A 1 47 THR 47 47 47 THR THR A . n A 1 48 LYS 48 48 48 LYS LYS A . n A 1 49 VAL 49 49 49 VAL VAL A . n A 1 50 LEU 50 50 50 LEU LEU A . n A 1 51 ASP 51 51 51 ASP ASP A . n A 1 52 PHE 52 52 52 PHE PHE A . n A 1 53 GLY 53 53 53 GLY GLY A . n A 1 54 ILE 54 54 54 ILE ILE A . n A 1 55 ASP 55 55 55 ASP ASP A . n A 1 56 LYS 56 56 56 LYS LYS A . n A 1 57 LEU 57 57 57 LEU LEU A . n A 1 58 ILE 58 58 58 ILE ILE A . n A 1 59 GLN 59 59 59 GLN GLN A . n A 1 60 LEU 60 60 60 LEU LEU A . n A 1 61 ILE 61 61 61 ILE ILE A . n A 1 62 GLU 62 62 62 GLU GLU A . n A 1 63 ASP 63 63 63 ASP ASP A . n A 1 64 LYS 64 64 64 LYS LYS A . n A 1 65 VAL 65 65 65 VAL VAL A . n A 1 66 ASP 66 66 66 ASP ASP A . n A 1 67 ALA 67 67 67 ALA ALA A . n A 1 68 ASN 68 68 68 ASN ASN A . n A 1 69 ALA 69 69 69 ALA ALA A . n A 1 70 ILE 70 70 70 ILE ILE A . n A 1 71 CYS 71 71 71 CYS CYS A . n A 1 72 ALA 72 72 72 ALA ALA A . n A 1 73 LYS 73 73 73 LYS LYS A . n A 1 74 ILE 74 74 74 ILE ILE A . n A 1 75 HIS 75 75 75 HIS HIS A . n A 1 76 ALA 76 76 76 ALA ALA A . n A 1 77 CYS 77 77 77 CYS CYS A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-02-26 2 'Structure model' 1 1 2011-05-08 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' # _pdbx_entry_details.entry_id 1OF9 _pdbx_entry_details.compound_details ;FORMS PORES IN THE CYTOPLASMIC MEMBRANE OF HOST CELLS. HAS ANTIBACTERIAL ACTIVITY AGAINST M.LUTEUS. CONTAINS ONE SAPOSIN DOMAIN. ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 4 ? ? -147.97 46.77 2 1 ASN A 6 ? ? -39.46 -31.42 3 1 CYS A 8 ? ? -64.77 -79.45 4 1 LEU A 18 ? ? -52.72 -87.85 5 1 THR A 20 ? ? 30.18 42.41 6 1 THR A 21 ? ? -176.60 -45.97 7 1 ALA A 24 ? ? 95.47 16.74 8 1 LYS A 37 ? ? -159.74 38.34 9 1 ALA A 38 ? ? -107.26 -88.76 10 1 ASP A 63 ? ? -74.58 -70.85 11 1 LYS A 64 ? ? 171.55 40.07 12 1 ASP A 66 ? ? -50.30 -177.23 13 1 LYS A 73 ? ? -51.06 -71.10 14 1 ILE A 74 ? ? -66.45 1.15 15 1 HIS A 75 ? ? 69.13 81.97 16 2 CYS A 8 ? ? -68.12 -76.93 17 2 LEU A 18 ? ? -49.14 -89.60 18 2 THR A 20 ? ? 42.62 22.40 19 2 THR A 21 ? ? 165.12 -41.85 20 2 SER A 32 ? ? -35.42 -35.83 21 2 LYS A 37 ? ? -159.34 41.41 22 2 ALA A 38 ? ? -132.33 -98.80 23 2 LYS A 64 ? ? 162.34 68.75 24 2 ASP A 66 ? ? -47.93 178.09 25 2 HIS A 75 ? ? 33.57 52.12 26 2 ALA A 76 ? ? -97.87 31.41 27 3 GLU A 2 ? ? 86.26 -4.60 28 3 LEU A 4 ? ? -174.25 61.61 29 3 LEU A 7 ? ? -64.71 -87.42 30 3 CYS A 8 ? ? -43.82 -74.21 31 3 THR A 9 ? ? -38.49 -28.45 32 3 LEU A 18 ? ? -46.73 -82.21 33 3 THR A 21 ? ? 84.63 113.60 34 3 LYS A 22 ? ? 171.12 -69.87 35 3 LYS A 37 ? ? -170.65 36.99 36 3 ALA A 38 ? ? -111.21 -89.35 37 3 SER A 39 ? ? 37.32 42.28 38 3 LYS A 64 ? ? 166.92 42.37 39 3 ASP A 66 ? ? -50.37 -177.92 40 4 GLU A 2 ? ? -166.43 85.65 41 4 ILE A 3 ? ? -44.83 -70.77 42 4 CYS A 5 ? ? -65.78 -71.80 43 4 LEU A 18 ? ? -51.57 -87.80 44 4 THR A 21 ? ? 88.69 -21.73 45 4 LYS A 37 ? ? -170.33 65.77 46 4 ALA A 38 ? ? -144.94 -88.16 47 4 SER A 39 ? ? 39.89 56.19 48 4 ILE A 61 ? ? -38.82 -36.35 49 4 LYS A 64 ? ? 159.91 81.10 50 4 ASP A 66 ? ? -50.23 -178.96 51 5 GLU A 2 ? ? 60.88 89.95 52 5 LEU A 4 ? ? -171.14 33.25 53 5 CYS A 8 ? ? -82.67 -76.14 54 5 THR A 9 ? ? -38.70 -27.85 55 5 LEU A 18 ? ? -36.26 -77.65 56 5 THR A 21 ? ? 83.27 111.88 57 5 LYS A 22 ? ? 158.76 -53.22 58 5 LYS A 37 ? ? -172.25 40.33 59 5 ALA A 38 ? ? -110.09 -91.07 60 5 SER A 39 ? ? 38.76 43.66 61 5 LYS A 64 ? ? 170.56 41.79 62 5 ASP A 66 ? ? -48.60 -179.15 63 5 ALA A 76 ? ? -88.36 43.37 64 6 GLU A 2 ? ? -146.58 56.53 65 6 ILE A 3 ? ? -41.03 -70.91 66 6 CYS A 5 ? ? -62.98 -73.42 67 6 ASN A 6 ? ? -39.63 -32.33 68 6 CYS A 8 ? ? -66.40 -78.78 69 6 LEU A 18 ? ? -46.01 -88.29 70 6 THR A 20 ? ? 24.54 51.75 71 6 THR A 21 ? ? 179.48 -52.36 72 6 LYS A 22 ? ? -71.79 -76.10 73 6 ALA A 24 ? ? 158.01 -26.33 74 6 LYS A 37 ? ? -174.32 39.05 75 6 ALA A 38 ? ? -103.84 -97.29 76 6 LYS A 64 ? ? 159.69 44.72 77 6 ASP A 66 ? ? -49.92 -179.57 78 6 HIS A 75 ? ? 65.30 83.98 79 7 GLU A 2 ? ? -153.65 43.30 80 7 ILE A 3 ? ? -58.47 -81.22 81 7 LEU A 7 ? ? -67.71 -79.84 82 7 LEU A 18 ? ? -53.06 -88.33 83 7 THR A 20 ? ? 31.63 39.49 84 7 THR A 21 ? ? -178.52 -38.22 85 7 ALA A 24 ? ? 95.39 21.65 86 7 LYS A 37 ? ? -174.71 39.19 87 7 ALA A 38 ? ? -105.64 -91.54 88 7 ILE A 61 ? ? -38.38 -31.68 89 7 LYS A 64 ? ? 160.02 81.08 90 7 ASP A 66 ? ? -48.51 177.23 91 7 HIS A 75 ? ? 38.41 45.60 92 8 GLU A 2 ? ? -171.93 64.33 93 8 LEU A 4 ? ? -152.66 43.88 94 8 CYS A 8 ? ? -65.40 -82.75 95 8 THR A 9 ? ? -38.75 -28.91 96 8 LEU A 18 ? ? -57.06 -88.95 97 8 THR A 20 ? ? 41.12 24.19 98 8 THR A 21 ? ? 163.78 -42.25 99 8 LYS A 37 ? ? -83.91 49.04 100 8 ALA A 38 ? ? -117.56 -97.92 101 8 SER A 39 ? ? 38.08 40.88 102 8 LYS A 64 ? ? 157.48 64.50 103 8 ASP A 66 ? ? -49.04 178.13 104 8 HIS A 75 ? ? 32.17 50.13 105 9 GLU A 2 ? ? 78.54 40.15 106 9 LEU A 4 ? ? -149.92 48.10 107 9 LEU A 7 ? ? -64.35 -72.90 108 9 LEU A 18 ? ? -50.02 -90.77 109 9 THR A 20 ? ? 34.04 37.26 110 9 THR A 21 ? ? -179.69 -40.12 111 9 ALA A 24 ? ? 89.32 27.52 112 9 LYS A 37 ? ? -86.17 48.71 113 9 ALA A 38 ? ? -116.20 -104.65 114 9 LYS A 64 ? ? 159.45 58.59 115 9 ASP A 66 ? ? -48.50 178.91 116 10 GLU A 2 ? ? -39.41 -75.35 117 10 ILE A 3 ? ? -36.56 -34.70 118 10 CYS A 5 ? ? -162.98 -40.91 119 10 ASN A 6 ? ? -36.63 -33.37 120 10 LEU A 7 ? ? -50.88 -73.61 121 10 CYS A 8 ? ? -87.74 -70.88 122 10 THR A 9 ? ? -38.58 -29.24 123 10 LEU A 18 ? ? -39.02 -82.15 124 10 THR A 21 ? ? 84.13 113.79 125 10 LYS A 22 ? ? 174.53 -66.77 126 10 ALA A 24 ? ? 78.11 -0.96 127 10 LYS A 37 ? ? -179.79 40.04 128 10 ALA A 38 ? ? -104.37 -95.56 129 10 SER A 39 ? ? 37.52 42.06 130 10 LYS A 64 ? ? 159.81 68.12 131 10 ASP A 66 ? ? -50.16 -178.26 132 10 LYS A 73 ? ? -51.25 -72.86 133 10 HIS A 75 ? ? 66.97 70.61 134 10 ALA A 76 ? ? -101.98 -89.65 135 11 GLU A 2 ? ? -171.16 32.62 136 11 LEU A 4 ? ? -151.40 36.94 137 11 CYS A 5 ? ? -70.72 -72.78 138 11 LEU A 7 ? ? -65.63 -70.61 139 11 LEU A 18 ? ? -53.03 -90.65 140 11 THR A 20 ? ? 39.79 25.71 141 11 THR A 21 ? ? 162.70 -41.50 142 11 LYS A 37 ? ? -174.37 39.51 143 11 ALA A 38 ? ? -113.40 -97.41 144 11 LYS A 64 ? ? 161.28 44.97 145 11 ASP A 66 ? ? -49.51 179.34 146 12 GLU A 2 ? ? -99.99 58.72 147 12 LEU A 4 ? ? -173.47 55.43 148 12 CYS A 8 ? ? -66.06 -77.93 149 12 THR A 9 ? ? -38.77 -27.52 150 12 LEU A 18 ? ? -56.43 -89.86 151 12 THR A 20 ? ? 36.40 91.12 152 12 THR A 21 ? ? 88.96 -21.43 153 12 LYS A 37 ? ? -86.58 48.02 154 12 ALA A 38 ? ? -118.70 -103.44 155 12 SER A 39 ? ? 38.50 57.03 156 12 LYS A 64 ? ? 163.41 43.18 157 12 ASP A 66 ? ? -50.90 -178.03 158 12 LYS A 73 ? ? -50.43 -70.29 159 12 HIS A 75 ? ? 68.62 94.47 160 12 ALA A 76 ? ? -153.24 22.79 161 13 GLU A 2 ? ? 90.30 -7.76 162 13 LEU A 4 ? ? 176.32 64.93 163 13 CYS A 8 ? ? -76.40 -76.59 164 13 THR A 9 ? ? -36.44 -30.49 165 13 LEU A 18 ? ? -40.18 -83.23 166 13 THR A 20 ? ? 32.53 103.55 167 13 THR A 21 ? ? 87.33 -6.49 168 13 LYS A 22 ? ? -78.95 -74.71 169 13 ALA A 24 ? ? 88.42 13.20 170 13 LYS A 37 ? ? -170.26 40.39 171 13 ALA A 38 ? ? -129.54 -89.10 172 13 LYS A 64 ? ? 170.69 40.40 173 13 ASP A 66 ? ? -49.12 179.62 174 13 ALA A 76 ? ? -76.78 -128.42 175 14 GLU A 2 ? ? -172.11 57.84 176 14 LEU A 4 ? ? -155.22 43.70 177 14 CYS A 8 ? ? -54.78 -76.18 178 14 LEU A 18 ? ? -34.76 -81.59 179 14 THR A 21 ? ? 83.79 114.69 180 14 LYS A 22 ? ? 171.71 -69.00 181 14 ALA A 24 ? ? 78.38 -0.81 182 14 LYS A 37 ? ? -165.60 49.46 183 14 ALA A 38 ? ? -126.31 -87.68 184 14 LYS A 64 ? ? 161.75 44.01 185 14 ASP A 66 ? ? -48.67 179.29 186 14 HIS A 75 ? ? 61.71 74.69 187 15 GLU A 2 ? ? -173.09 69.06 188 15 LEU A 4 ? ? -166.17 34.25 189 15 CYS A 5 ? ? -71.15 -70.58 190 15 LEU A 7 ? ? -66.05 -84.19 191 15 CYS A 8 ? ? -43.27 -74.52 192 15 LEU A 18 ? ? -45.51 -88.40 193 15 THR A 20 ? ? 34.80 92.47 194 15 THR A 21 ? ? 86.36 -8.83 195 15 LYS A 37 ? ? -92.18 53.04 196 15 ALA A 38 ? ? -135.74 -101.69 197 15 SER A 39 ? ? 38.24 43.31 198 15 LYS A 64 ? ? 160.73 44.39 199 15 ASP A 66 ? ? -48.69 178.10 200 16 GLU A 2 ? ? 78.92 53.04 201 16 ILE A 3 ? ? -42.72 -82.44 202 16 CYS A 5 ? ? -65.28 -73.05 203 16 LEU A 18 ? ? -47.50 -85.36 204 16 THR A 20 ? ? 34.39 35.15 205 16 THR A 21 ? ? -179.52 -40.69 206 16 ALA A 24 ? ? 90.58 11.58 207 16 ALA A 38 ? ? -115.08 -103.74 208 16 SER A 39 ? ? 37.57 46.74 209 16 LYS A 64 ? ? 158.43 71.26 210 16 ASP A 66 ? ? -48.78 178.22 211 17 GLU A 2 ? ? 179.06 36.39 212 17 CYS A 5 ? ? -63.92 -74.56 213 17 LEU A 18 ? ? -48.34 -93.88 214 17 THR A 20 ? ? 35.84 43.42 215 17 THR A 21 ? ? -174.55 -46.85 216 17 LYS A 22 ? ? -83.55 -76.30 217 17 ALA A 38 ? ? -121.31 -102.33 218 17 ASP A 63 ? ? -74.92 -71.51 219 17 LYS A 64 ? ? 172.49 39.24 220 17 ASP A 66 ? ? -50.53 -179.72 221 17 HIS A 75 ? ? 34.09 42.68 222 18 GLU A 2 ? ? 46.82 28.10 223 18 LEU A 4 ? ? 179.11 54.28 224 18 LEU A 7 ? ? -63.68 -76.89 225 18 LEU A 18 ? ? -51.75 -92.37 226 18 THR A 20 ? ? 31.98 39.64 227 18 THR A 21 ? ? -177.11 -38.96 228 18 ALA A 24 ? ? 93.19 30.30 229 18 LYS A 37 ? ? -176.56 39.01 230 18 ALA A 38 ? ? -116.03 -92.58 231 18 SER A 39 ? ? 38.83 54.64 232 18 LYS A 64 ? ? 172.75 38.93 233 18 ASP A 66 ? ? -50.17 -177.74 234 18 LYS A 73 ? ? -50.28 -71.34 235 19 GLU A 2 ? ? 178.03 95.90 236 19 LEU A 4 ? ? -168.42 36.17 237 19 CYS A 5 ? ? -54.73 -71.88 238 19 LEU A 7 ? ? -62.82 -76.78 239 19 LEU A 18 ? ? -54.21 -92.43 240 19 THR A 20 ? ? 31.31 39.40 241 19 THR A 21 ? ? -134.90 -47.35 242 19 LYS A 22 ? ? 178.39 -32.29 243 19 ASN A 36 ? ? -39.16 -30.61 244 19 ALA A 38 ? ? -123.19 -107.95 245 19 SER A 39 ? ? 38.37 46.88 246 19 ILE A 61 ? ? -38.51 -34.22 247 19 LYS A 64 ? ? 160.87 82.14 248 19 ASP A 66 ? ? -48.42 178.08 249 19 ALA A 76 ? ? -53.68 -101.27 250 20 LEU A 4 ? ? 176.54 55.47 251 20 LEU A 18 ? ? -44.81 -85.05 252 20 THR A 20 ? ? 32.87 38.31 253 20 THR A 21 ? ? 176.82 -41.34 254 20 ALA A 24 ? ? 89.76 14.35 255 20 LYS A 37 ? ? -164.81 45.90 256 20 ALA A 38 ? ? -114.56 -100.79 257 20 LYS A 64 ? ? 164.44 41.87 258 20 ASP A 66 ? ? -49.94 -179.39 259 20 HIS A 75 ? ? 33.22 42.84 #