data_1PJI # _entry.id 1PJI # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.376 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1PJI pdb_00001pji 10.2210/pdb1pji/pdb NDB PD0446 ? ? RCSB RCSB019363 ? ? WWPDB D_1000019363 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1KFV . unspecified PDB 1NNJ . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1PJI _pdbx_database_status.recvd_initial_deposition_date 2003-06-03 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Pereira, K.' 1 'Serre, L.' 2 'Zelwer, C.' 3 'Castaing, B.' 4 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary ;Structural insights into abasic site for Fpg specific binding and catalysis: comparative high-resolution crystallographic studies of Fpg bound to various models of abasic site analogues-containing DNA. ; 'Nucleic Acids Res.' 33 5936 5944 2005 NARHAD UK 0305-1048 0389 ? 16243784 10.1093/nar/gki879 1 'crystal structure of the lactococcus lactis FPG bound to an abasic site analogue containing DNA' 'Embo J.' 21 2854 2865 2002 EMJODG UK 0261-4189 0897 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Pereira de Jesus, K.' 1 ? primary 'Serre, L.' 2 ? primary 'Zelwer, C.' 3 ? primary 'Castaing, B.' 4 ? # _cell.entry_id 1PJI _cell.length_a 91.955 _cell.length_b 91.955 _cell.length_c 142.076 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1PJI _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*CP*TP*CP*TP*TP*TP*(PDI)P*TP*TP*TP*CP*TP*CP*G)-3') ; 4012.577 1 ? ? ? ? 2 polymer syn ;DNA (5'-D(*GP*CP*GP*AP*GP*AP*AP*AP*CP*AP*AP*AP*GP*A)-3') ; 4355.884 1 ? ? ? ? 3 polymer man 'Formamidopyrimidine-DNA glycosylase' 31116.217 1 3.2.2.23 ? ? ? 4 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? 5 non-polymer syn GLYCEROL 92.094 4 ? ? ? ? 6 water nat water 18.015 223 ? ? ? ? # _entity_name_com.entity_id 3 _entity_name_com.name 'FAPY-DNA glycosylase' # _entity_name_sys.entity_id 3 _entity_name_sys.name 3.2.2.23 # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no yes '(DC)(DT)(DC)(DT)(DT)(DT)(PDI)(DT)(DT)(DT)(DC)(DT)(DC)(DG)' CTCTTTXTTTCTCG D ? 2 polydeoxyribonucleotide no no '(DG)(DC)(DG)(DA)(DG)(DA)(DA)(DA)(DC)(DA)(DA)(DA)(DG)(DA)' GCGAGAAACAAAGA E ? 3 'polypeptide(L)' no no ;PELPEVETVRRELEKRIVGQKIISIEATYPRMVLTGFEQLKKELTGKTIQGISRRGKYLIFEIGDDFRLISHLRMEGKYR LATLDAPREKHDHLTMKFADGQLIYADVRKFGTWELISTDQVLPYFLKKKIGPEPTYEDFDEKLFREKLRKSTKKIKPYL LEQTLVAGLGNIYVDEVLWLAKIHPEKETNQLIESSIHLLHDSIIEILQKAIKLGGSSIRTYSALGSTGKMQNELQVYGK TGEKCSRCGAEIQKIKVAGRGTHFCPVCQQK ; ;PELPEVETVRRELEKRIVGQKIISIEATYPRMVLTGFEQLKKELTGKTIQGISRRGKYLIFEIGDDFRLISHLRMEGKYR LATLDAPREKHDHLTMKFADGQLIYADVRKFGTWELISTDQVLPYFLKKKIGPEPTYEDFDEKLFREKLRKSTKKIKPYL LEQTLVAGLGNIYVDEVLWLAKIHPEKETNQLIESSIHLLHDSIIEILQKAIKLGGSSIRTYSALGSTGKMQNELQVYGK TGEKCSRCGAEIQKIKVAGRGTHFCPVCQQK ; A ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DT n 1 3 DC n 1 4 DT n 1 5 DT n 1 6 DT n 1 7 PDI n 1 8 DT n 1 9 DT n 1 10 DT n 1 11 DC n 1 12 DT n 1 13 DC n 1 14 DG n 2 1 DG n 2 2 DC n 2 3 DG n 2 4 DA n 2 5 DG n 2 6 DA n 2 7 DA n 2 8 DA n 2 9 DC n 2 10 DA n 2 11 DA n 2 12 DA n 2 13 DG n 2 14 DA n 3 1 PRO n 3 2 GLU n 3 3 LEU n 3 4 PRO n 3 5 GLU n 3 6 VAL n 3 7 GLU n 3 8 THR n 3 9 VAL n 3 10 ARG n 3 11 ARG n 3 12 GLU n 3 13 LEU n 3 14 GLU n 3 15 LYS n 3 16 ARG n 3 17 ILE n 3 18 VAL n 3 19 GLY n 3 20 GLN n 3 21 LYS n 3 22 ILE n 3 23 ILE n 3 24 SER n 3 25 ILE n 3 26 GLU n 3 27 ALA n 3 28 THR n 3 29 TYR n 3 30 PRO n 3 31 ARG n 3 32 MET n 3 33 VAL n 3 34 LEU n 3 35 THR n 3 36 GLY n 3 37 PHE n 3 38 GLU n 3 39 GLN n 3 40 LEU n 3 41 LYS n 3 42 LYS n 3 43 GLU n 3 44 LEU n 3 45 THR n 3 46 GLY n 3 47 LYS n 3 48 THR n 3 49 ILE n 3 50 GLN n 3 51 GLY n 3 52 ILE n 3 53 SER n 3 54 ARG n 3 55 ARG n 3 56 GLY n 3 57 LYS n 3 58 TYR n 3 59 LEU n 3 60 ILE n 3 61 PHE n 3 62 GLU n 3 63 ILE n 3 64 GLY n 3 65 ASP n 3 66 ASP n 3 67 PHE n 3 68 ARG n 3 69 LEU n 3 70 ILE n 3 71 SER n 3 72 HIS n 3 73 LEU n 3 74 ARG n 3 75 MET n 3 76 GLU n 3 77 GLY n 3 78 LYS n 3 79 TYR n 3 80 ARG n 3 81 LEU n 3 82 ALA n 3 83 THR n 3 84 LEU n 3 85 ASP n 3 86 ALA n 3 87 PRO n 3 88 ARG n 3 89 GLU n 3 90 LYS n 3 91 HIS n 3 92 ASP n 3 93 HIS n 3 94 LEU n 3 95 THR n 3 96 MET n 3 97 LYS n 3 98 PHE n 3 99 ALA n 3 100 ASP n 3 101 GLY n 3 102 GLN n 3 103 LEU n 3 104 ILE n 3 105 TYR n 3 106 ALA n 3 107 ASP n 3 108 VAL n 3 109 ARG n 3 110 LYS n 3 111 PHE n 3 112 GLY n 3 113 THR n 3 114 TRP n 3 115 GLU n 3 116 LEU n 3 117 ILE n 3 118 SER n 3 119 THR n 3 120 ASP n 3 121 GLN n 3 122 VAL n 3 123 LEU n 3 124 PRO n 3 125 TYR n 3 126 PHE n 3 127 LEU n 3 128 LYS n 3 129 LYS n 3 130 LYS n 3 131 ILE n 3 132 GLY n 3 133 PRO n 3 134 GLU n 3 135 PRO n 3 136 THR n 3 137 TYR n 3 138 GLU n 3 139 ASP n 3 140 PHE n 3 141 ASP n 3 142 GLU n 3 143 LYS n 3 144 LEU n 3 145 PHE n 3 146 ARG n 3 147 GLU n 3 148 LYS n 3 149 LEU n 3 150 ARG n 3 151 LYS n 3 152 SER n 3 153 THR n 3 154 LYS n 3 155 LYS n 3 156 ILE n 3 157 LYS n 3 158 PRO n 3 159 TYR n 3 160 LEU n 3 161 LEU n 3 162 GLU n 3 163 GLN n 3 164 THR n 3 165 LEU n 3 166 VAL n 3 167 ALA n 3 168 GLY n 3 169 LEU n 3 170 GLY n 3 171 ASN n 3 172 ILE n 3 173 TYR n 3 174 VAL n 3 175 ASP n 3 176 GLU n 3 177 VAL n 3 178 LEU n 3 179 TRP n 3 180 LEU n 3 181 ALA n 3 182 LYS n 3 183 ILE n 3 184 HIS n 3 185 PRO n 3 186 GLU n 3 187 LYS n 3 188 GLU n 3 189 THR n 3 190 ASN n 3 191 GLN n 3 192 LEU n 3 193 ILE n 3 194 GLU n 3 195 SER n 3 196 SER n 3 197 ILE n 3 198 HIS n 3 199 LEU n 3 200 LEU n 3 201 HIS n 3 202 ASP n 3 203 SER n 3 204 ILE n 3 205 ILE n 3 206 GLU n 3 207 ILE n 3 208 LEU n 3 209 GLN n 3 210 LYS n 3 211 ALA n 3 212 ILE n 3 213 LYS n 3 214 LEU n 3 215 GLY n 3 216 GLY n 3 217 SER n 3 218 SER n 3 219 ILE n 3 220 ARG n 3 221 THR n 3 222 TYR n 3 223 SER n 3 224 ALA n 3 225 LEU n 3 226 GLY n 3 227 SER n 3 228 THR n 3 229 GLY n 3 230 LYS n 3 231 MET n 3 232 GLN n 3 233 ASN n 3 234 GLU n 3 235 LEU n 3 236 GLN n 3 237 VAL n 3 238 TYR n 3 239 GLY n 3 240 LYS n 3 241 THR n 3 242 GLY n 3 243 GLU n 3 244 LYS n 3 245 CYS n 3 246 SER n 3 247 ARG n 3 248 CYS n 3 249 GLY n 3 250 ALA n 3 251 GLU n 3 252 ILE n 3 253 GLN n 3 254 LYS n 3 255 ILE n 3 256 LYS n 3 257 VAL n 3 258 ALA n 3 259 GLY n 3 260 ARG n 3 261 GLY n 3 262 THR n 3 263 HIS n 3 264 PHE n 3 265 CYS n 3 266 PRO n 3 267 VAL n 3 268 CYS n 3 269 GLN n 3 270 GLN n 3 271 LYS n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Lactococcus _entity_src_gen.pdbx_gene_src_gene 'MUTM OR FPG' _entity_src_gen.gene_src_species 'Lactococcus lactis' _entity_src_gen.gene_src_strain 'subsp. cremoris' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Lactococcus lactis subsp. cremoris' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1359 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PMAL-C _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample ? ? ? ? ? synthetic 2 1 sample ? ? ? ? ? synthetic # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP FPG_LACLC P42371 3 ;PELPEVETVRRELEKRIVGQKIISIEATYPRMVLTGFEQLKKELTGKTIQGISRRGKYLIFEIGDDFRLISHLRMEGKYR LATLDAPREKHDHLTMKFADGQLIYADVRKFGTWELISTDQVLPYFLKKKIGPEPTYDEDFDEKLFREKLRKSTKKIKPY LLEQTLVAGLGNIYVDEVLWLAKIHPEKETNQLIESSIHLLHDSIIEILQKAIKLGG-SSIRTYSALGSTGKMQNELQVY GKTGEKCSRCGAEIQKIKVAGRGTHFCPVCQQK ; 2 ? 2 PDB 1PJI 1PJI 1 ? ? ? 3 PDB 1PJI 1PJI 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1PJI A 1 ? 271 ? P42371 2 ? 273 ? 1 271 2 2 1PJI D 1 ? 14 ? 1PJI 1 ? 14 ? 1 14 3 3 1PJI E 1 ? 14 ? 1PJI 15 ? 28 ? 15 28 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 1PJI _struct_ref_seq_dif.mon_id ? _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num ? _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P42371 _struct_ref_seq_dif.db_mon_id ASP _struct_ref_seq_dif.pdbx_seq_db_seq_num 139 _struct_ref_seq_dif.details 'SEE REMARK 999' _struct_ref_seq_dif.pdbx_auth_seq_num ? _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PDI non-polymer . 'PHOSPHORIC ACID MONO-(3-HYDROXY-PROPYL) ESTER' ? 'C3 H9 O5 P' 156.074 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.entry_id 1PJI _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.77 _exptl_crystal.density_percent_sol 67.40 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 296 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details 'citrate, Hepes, glycerol, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 296K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 citrate ? ? ? 1 2 1 Hepes ? ? ? 1 3 1 glycerol ? ? ? 1 4 1 water ? ? ? 1 5 2 citrate ? ? ? 1 6 2 glycerol ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2003-05-01 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator MIRROR _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE BM30A' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline BM30A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97 # _reflns.entry_id 1PJI _reflns.observed_criterion_sigma_F 0.0 _reflns.observed_criterion_sigma_I 0.0 _reflns.d_resolution_high 1.9 _reflns.d_resolution_low 77 _reflns.number_all 49154 _reflns.number_obs 48727 _reflns.percent_possible_obs 99.2 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.062 _reflns.pdbx_netI_over_sigmaI 16.5 _reflns.B_iso_Wilson_estimate 30.7 _reflns.pdbx_redundancy 2.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.90 _reflns_shell.d_res_low 1.97 _reflns_shell.percent_possible_all 99.0 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.53 _reflns_shell.meanI_over_sigI_obs 1.0 _reflns_shell.pdbx_redundancy 2.0 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1PJI _refine.ls_d_res_high 1.9 _refine.ls_d_res_low 40 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 48718 _refine.ls_number_reflns_obs 48299 _refine.ls_number_reflns_R_free 4766 _refine.ls_percent_reflns_obs 99.1 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_work 0.21 _refine.ls_R_factor_R_free 0.237 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 1KFV _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_mean 34.5 _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.details 'The water 218 is located close to a special position in the crystal' _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2143 _refine_hist.pdbx_number_atoms_nucleic_acid 554 _refine_hist.pdbx_number_atoms_ligand 25 _refine_hist.number_atoms_solvent 223 _refine_hist.number_atoms_total 2945 _refine_hist.d_res_high 1.9 _refine_hist.d_res_low 40 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.005481 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.23959 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 1.90 _refine_ls_shell.d_res_low 1.91 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_work 0.3041 _refine_ls_shell.percent_reflns_obs 98.0 _refine_ls_shell.R_factor_R_free 0.3475 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 100 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _struct.entry_id 1PJI _struct.title 'Crystal structure of wild type Lactococcus lactis FPG complexed to a 1,3 propanediol containing DNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1PJI _struct_keywords.pdbx_keywords Hydrolase/DNA _struct_keywords.text 'DNA repair, FPG, MutM, Abasic site, Hydrolase-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? H N N 5 ? I N N 6 ? J N N 6 ? K N N 6 ? # _struct_biol.id 1 _struct_biol.details 'the biological assembly corresponds to one FPG and one DNA duplex' _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU C 2 ? VAL C 18 ? GLU A 2 VAL A 18 1 ? 17 HELX_P HELX_P2 2 TYR C 29 ? VAL C 33 ? TYR A 29 VAL A 33 5 ? 5 HELX_P HELX_P3 3 GLY C 36 ? THR C 45 ? GLY A 36 THR A 45 1 ? 10 HELX_P HELX_P4 4 GLN C 121 ? LYS C 130 ? GLN A 121 LYS A 130 1 ? 10 HELX_P HELX_P5 5 ASP C 141 ? SER C 152 ? ASP A 141 SER A 152 1 ? 12 HELX_P HELX_P6 6 LYS C 155 ? GLU C 162 ? LYS A 155 GLU A 162 1 ? 8 HELX_P HELX_P7 7 GLY C 170 ? ALA C 181 ? GLY A 170 ALA A 181 1 ? 12 HELX_P HELX_P8 8 GLU C 188 ? LEU C 192 ? GLU A 188 LEU A 192 5 ? 5 HELX_P HELX_P9 9 ILE C 193 ? LEU C 214 ? ILE A 193 LEU A 214 1 ? 22 HELX_P HELX_P10 10 LYS C 230 ? LEU C 235 ? LYS A 230 LEU A 235 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale one ? A DT 6 "O3'" ? ? ? 1_555 A PDI 7 P ? ? D DT 6 D PDI 7 1_555 ? ? ? ? ? ? ? 1.601 ? ? covale2 covale one ? A PDI 7 OG ? ? ? 1_555 A DT 8 P ? ? D PDI 7 D DT 8 1_555 ? ? ? ? ? ? ? 1.594 ? ? metalc1 metalc ? ? C CYS 245 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 245 A ZN 300 1_555 ? ? ? ? ? ? ? 2.423 ? ? metalc2 metalc ? ? C CYS 248 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 248 A ZN 300 1_555 ? ? ? ? ? ? ? 2.497 ? ? metalc3 metalc ? ? C CYS 265 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 265 A ZN 300 1_555 ? ? ? ? ? ? ? 2.181 ? ? metalc4 metalc ? ? C CYS 268 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 268 A ZN 300 1_555 ? ? ? ? ? ? ? 2.406 ? ? hydrog1 hydrog ? ? A DT 2 N3 ? ? ? 1_555 B DA 14 N1 ? ? D DT 2 E DA 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DT 2 O4 ? ? ? 1_555 B DA 14 N6 ? ? D DT 2 E DA 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 3 N3 ? ? ? 1_555 B DG 13 N1 ? ? D DC 3 E DG 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 3 N4 ? ? ? 1_555 B DG 13 O6 ? ? D DC 3 E DG 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 3 O2 ? ? ? 1_555 B DG 13 N2 ? ? D DC 3 E DG 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DT 4 N3 ? ? ? 1_555 B DA 12 N1 ? ? D DT 4 E DA 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DT 4 O4 ? ? ? 1_555 B DA 12 N6 ? ? D DT 4 E DA 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DT 5 N3 ? ? ? 1_555 B DA 11 N1 ? ? D DT 5 E DA 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DT 5 O4 ? ? ? 1_555 B DA 11 N6 ? ? D DT 5 E DA 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DT 6 N3 ? ? ? 1_555 B DA 10 N1 ? ? D DT 6 E DA 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DT 6 O4 ? ? ? 1_555 B DA 10 N6 ? ? D DT 6 E DA 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DT 8 N3 ? ? ? 1_555 B DA 8 N1 ? ? D DT 8 E DA 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DT 8 O4 ? ? ? 1_555 B DA 8 N6 ? ? D DT 8 E DA 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DT 9 N3 ? ? ? 1_555 B DA 7 N1 ? ? D DT 9 E DA 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DT 9 O4 ? ? ? 1_555 B DA 7 N6 ? ? D DT 9 E DA 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DT 10 N3 ? ? ? 1_555 B DA 6 N1 ? ? D DT 10 E DA 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DT 10 O4 ? ? ? 1_555 B DA 6 N6 ? ? D DT 10 E DA 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DC 11 N3 ? ? ? 1_555 B DG 5 N1 ? ? D DC 11 E DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DC 11 N4 ? ? ? 1_555 B DG 5 O6 ? ? D DC 11 E DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DC 11 O2 ? ? ? 1_555 B DG 5 N2 ? ? D DC 11 E DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DT 12 N3 ? ? ? 1_555 B DA 4 N1 ? ? D DT 12 E DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DT 12 O4 ? ? ? 1_555 B DA 4 N6 ? ? D DT 12 E DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DC 13 N3 ? ? ? 1_555 B DG 3 N1 ? ? D DC 13 E DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DC 13 N4 ? ? ? 1_555 B DG 3 O6 ? ? D DC 13 E DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DC 13 O2 ? ? ? 1_555 B DG 3 N2 ? ? D DC 13 E DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DG 14 N1 ? ? ? 1_555 B DC 2 N3 ? ? D DG 14 E DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DG 14 N2 ? ? ? 1_555 B DC 2 O2 ? ? D DG 14 E DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DG 14 O6 ? ? ? 1_555 B DC 2 N4 ? ? D DG 14 E DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER C 24 ? ALA C 27 ? SER A 24 ALA A 27 A 2 ASP C 92 ? PHE C 98 ? ASP A 92 PHE A 98 A 3 GLY C 101 ? ALA C 106 ? GLY A 101 ALA A 106 A 4 LYS C 78 ? ALA C 82 ? LYS A 78 ALA A 82 B 1 ILE C 49 ? ARG C 55 ? ILE A 49 ARG A 55 B 2 TYR C 58 ? ILE C 63 ? TYR A 58 ILE A 63 B 3 PHE C 67 ? HIS C 72 ? PHE A 67 HIS A 72 B 4 THR C 113 ? SER C 118 ? THR A 113 SER A 118 C 1 GLN C 253 ? VAL C 257 ? GLN A 253 VAL A 257 C 2 ARG C 260 ? PHE C 264 ? ARG A 260 PHE A 264 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N SER C 24 ? N SER A 24 O LYS C 97 ? O LYS A 97 A 2 3 N PHE C 98 ? N PHE A 98 O GLY C 101 ? O GLY A 101 A 3 4 O ALA C 106 ? O ALA A 106 N LYS C 78 ? N LYS A 78 B 1 2 N SER C 53 ? N SER A 53 O ILE C 60 ? O ILE A 60 B 2 3 N LEU C 59 ? N LEU A 59 O SER C 71 ? O SER A 71 B 3 4 N ILE C 70 ? N ILE A 70 O GLU C 115 ? O GLU A 115 C 1 2 N ILE C 255 ? N ILE A 255 O THR C 262 ? O THR A 262 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 300 ? 4 'BINDING SITE FOR RESIDUE ZN A 300' AC2 Software A GOL 1001 ? 11 'BINDING SITE FOR RESIDUE GOL A 1001' AC3 Software A GOL 1002 ? 7 'BINDING SITE FOR RESIDUE GOL A 1002' AC4 Software A GOL 1003 ? 8 'BINDING SITE FOR RESIDUE GOL A 1003' AC5 Software A GOL 1004 ? 10 'BINDING SITE FOR RESIDUE GOL A 1004' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS C 245 ? CYS A 245 . ? 1_555 ? 2 AC1 4 CYS C 248 ? CYS A 248 . ? 1_555 ? 3 AC1 4 CYS C 265 ? CYS A 265 . ? 1_555 ? 4 AC1 4 CYS C 268 ? CYS A 268 . ? 1_555 ? 5 AC2 11 TYR C 58 ? TYR A 58 . ? 1_555 ? 6 AC2 11 HIS C 72 ? HIS A 72 . ? 1_555 ? 7 AC2 11 ARG C 74 ? ARG A 74 . ? 1_555 ? 8 AC2 11 THR C 113 ? THR A 113 . ? 1_555 ? 9 AC2 11 GLU C 115 ? GLU A 115 . ? 1_555 ? 10 AC2 11 TYR C 125 ? TYR A 125 . ? 1_555 ? 11 AC2 11 LYS C 129 ? LYS A 129 . ? 1_555 ? 12 AC2 11 GOL F . ? GOL A 1002 . ? 1_555 ? 13 AC2 11 HOH K . ? HOH A 1063 . ? 1_555 ? 14 AC2 11 DT A 9 ? DT D 9 . ? 1_555 ? 15 AC2 11 DT A 10 ? DT D 10 . ? 1_555 ? 16 AC3 7 ARG C 74 ? ARG A 74 . ? 1_555 ? 17 AC3 7 CYS C 248 ? CYS A 248 . ? 6_555 ? 18 AC3 7 GOL E . ? GOL A 1001 . ? 1_555 ? 19 AC3 7 HOH K . ? HOH A 1093 . ? 1_555 ? 20 AC3 7 HOH K . ? HOH A 1165 . ? 1_555 ? 21 AC3 7 DT A 10 ? DT D 10 . ? 1_555 ? 22 AC3 7 HOH J . ? HOH E 61 . ? 1_555 ? 23 AC4 8 ARG C 16 ? ARG A 16 . ? 1_555 ? 24 AC4 8 GLN C 20 ? GLN A 20 . ? 1_555 ? 25 AC4 8 LEU C 81 ? LEU A 81 . ? 1_555 ? 26 AC4 8 THR C 83 ? THR A 83 . ? 8_555 ? 27 AC4 8 ASP C 85 ? ASP A 85 . ? 8_555 ? 28 AC4 8 PHE C 98 ? PHE A 98 . ? 1_555 ? 29 AC4 8 ASP C 100 ? ASP A 100 . ? 1_555 ? 30 AC4 8 GLY C 101 ? GLY A 101 . ? 1_555 ? 31 AC5 10 GLY C 259 ? GLY A 259 . ? 1_555 ? 32 AC5 10 ARG C 260 ? ARG A 260 . ? 1_555 ? 33 AC5 10 HOH K . ? HOH A 1082 . ? 1_555 ? 34 AC5 10 HOH K . ? HOH A 1182 . ? 1_555 ? 35 AC5 10 DT A 6 ? DT D 6 . ? 1_555 ? 36 AC5 10 DT A 8 ? DT D 8 . ? 1_555 ? 37 AC5 10 DT A 9 ? DT D 9 . ? 1_555 ? 38 AC5 10 HOH I . ? HOH D 18 . ? 1_555 ? 39 AC5 10 DA B 6 ? DA E 20 . ? 1_555 ? 40 AC5 10 DA B 7 ? DA E 21 . ? 1_555 ? # _database_PDB_matrix.entry_id 1PJI _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1PJI _atom_sites.fract_transf_matrix[1][1] 0.010875 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010875 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007038 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC C D . n A 1 2 DT 2 2 2 DT T D . n A 1 3 DC 3 3 3 DC C D . n A 1 4 DT 4 4 4 DT T D . n A 1 5 DT 5 5 5 DT T D . n A 1 6 DT 6 6 6 DT T D . n A 1 7 PDI 7 7 7 PDI PDI D . n A 1 8 DT 8 8 8 DT T D . n A 1 9 DT 9 9 9 DT T D . n A 1 10 DT 10 10 10 DT T D . n A 1 11 DC 11 11 11 DC C D . n A 1 12 DT 12 12 12 DT T D . n A 1 13 DC 13 13 13 DC C D . n A 1 14 DG 14 14 14 DG G D . n B 2 1 DG 1 15 15 DG G E . n B 2 2 DC 2 16 16 DC C E . n B 2 3 DG 3 17 17 DG G E . n B 2 4 DA 4 18 18 DA A E . n B 2 5 DG 5 19 19 DG G E . n B 2 6 DA 6 20 20 DA A E . n B 2 7 DA 7 21 21 DA A E . n B 2 8 DA 8 22 22 DA A E . n B 2 9 DC 9 23 23 DC C E . n B 2 10 DA 10 24 24 DA A E . n B 2 11 DA 11 25 25 DA A E . n B 2 12 DA 12 26 26 DA A E . n B 2 13 DG 13 27 27 DG G E . n B 2 14 DA 14 28 28 DA A E . n C 3 1 PRO 1 1 1 PRO PRO A . n C 3 2 GLU 2 2 2 GLU GLU A . n C 3 3 LEU 3 3 3 LEU LEU A . n C 3 4 PRO 4 4 4 PRO PRO A . n C 3 5 GLU 5 5 5 GLU GLU A . n C 3 6 VAL 6 6 6 VAL VAL A . n C 3 7 GLU 7 7 7 GLU GLU A . n C 3 8 THR 8 8 8 THR THR A . n C 3 9 VAL 9 9 9 VAL VAL A . n C 3 10 ARG 10 10 10 ARG ARG A . n C 3 11 ARG 11 11 11 ARG ARG A . n C 3 12 GLU 12 12 12 GLU GLU A . n C 3 13 LEU 13 13 13 LEU LEU A . n C 3 14 GLU 14 14 14 GLU GLU A . n C 3 15 LYS 15 15 15 LYS LYS A . n C 3 16 ARG 16 16 16 ARG ARG A . n C 3 17 ILE 17 17 17 ILE ILE A . n C 3 18 VAL 18 18 18 VAL VAL A . n C 3 19 GLY 19 19 19 GLY GLY A . n C 3 20 GLN 20 20 20 GLN GLN A . n C 3 21 LYS 21 21 21 LYS LYS A . n C 3 22 ILE 22 22 22 ILE ILE A . n C 3 23 ILE 23 23 23 ILE ILE A . n C 3 24 SER 24 24 24 SER SER A . n C 3 25 ILE 25 25 25 ILE ILE A . n C 3 26 GLU 26 26 26 GLU GLU A . n C 3 27 ALA 27 27 27 ALA ALA A . n C 3 28 THR 28 28 28 THR THR A . n C 3 29 TYR 29 29 29 TYR TYR A . n C 3 30 PRO 30 30 30 PRO PRO A . n C 3 31 ARG 31 31 31 ARG ARG A . n C 3 32 MET 32 32 32 MET MET A . n C 3 33 VAL 33 33 33 VAL VAL A . n C 3 34 LEU 34 34 34 LEU LEU A . n C 3 35 THR 35 35 35 THR THR A . n C 3 36 GLY 36 36 36 GLY GLY A . n C 3 37 PHE 37 37 37 PHE PHE A . n C 3 38 GLU 38 38 38 GLU GLU A . n C 3 39 GLN 39 39 39 GLN GLN A . n C 3 40 LEU 40 40 40 LEU LEU A . n C 3 41 LYS 41 41 41 LYS LYS A . n C 3 42 LYS 42 42 42 LYS LYS A . n C 3 43 GLU 43 43 43 GLU GLU A . n C 3 44 LEU 44 44 44 LEU LEU A . n C 3 45 THR 45 45 45 THR THR A . n C 3 46 GLY 46 46 46 GLY GLY A . n C 3 47 LYS 47 47 47 LYS LYS A . n C 3 48 THR 48 48 48 THR THR A . n C 3 49 ILE 49 49 49 ILE ILE A . n C 3 50 GLN 50 50 50 GLN GLN A . n C 3 51 GLY 51 51 51 GLY GLY A . n C 3 52 ILE 52 52 52 ILE ILE A . n C 3 53 SER 53 53 53 SER SER A . n C 3 54 ARG 54 54 54 ARG ARG A . n C 3 55 ARG 55 55 55 ARG ARG A . n C 3 56 GLY 56 56 56 GLY GLY A . n C 3 57 LYS 57 57 57 LYS LYS A . n C 3 58 TYR 58 58 58 TYR TYR A . n C 3 59 LEU 59 59 59 LEU LEU A . n C 3 60 ILE 60 60 60 ILE ILE A . n C 3 61 PHE 61 61 61 PHE PHE A . n C 3 62 GLU 62 62 62 GLU GLU A . n C 3 63 ILE 63 63 63 ILE ILE A . n C 3 64 GLY 64 64 64 GLY GLY A . n C 3 65 ASP 65 65 65 ASP ASP A . n C 3 66 ASP 66 66 66 ASP ASP A . n C 3 67 PHE 67 67 67 PHE PHE A . n C 3 68 ARG 68 68 68 ARG ARG A . n C 3 69 LEU 69 69 69 LEU LEU A . n C 3 70 ILE 70 70 70 ILE ILE A . n C 3 71 SER 71 71 71 SER SER A . n C 3 72 HIS 72 72 72 HIS HIS A . n C 3 73 LEU 73 73 73 LEU LEU A . n C 3 74 ARG 74 74 74 ARG ARG A . n C 3 75 MET 75 75 75 MET MET A . n C 3 76 GLU 76 76 76 GLU GLU A . n C 3 77 GLY 77 77 77 GLY GLY A . n C 3 78 LYS 78 78 78 LYS LYS A . n C 3 79 TYR 79 79 79 TYR TYR A . n C 3 80 ARG 80 80 80 ARG ARG A . n C 3 81 LEU 81 81 81 LEU LEU A . n C 3 82 ALA 82 82 82 ALA ALA A . n C 3 83 THR 83 83 83 THR THR A . n C 3 84 LEU 84 84 84 LEU LEU A . n C 3 85 ASP 85 85 85 ASP ASP A . n C 3 86 ALA 86 86 86 ALA ALA A . n C 3 87 PRO 87 87 87 PRO PRO A . n C 3 88 ARG 88 88 88 ARG ALA A . n C 3 89 GLU 89 89 89 GLU GLU A . n C 3 90 LYS 90 90 90 LYS LYS A . n C 3 91 HIS 91 91 91 HIS HIS A . n C 3 92 ASP 92 92 92 ASP ASP A . n C 3 93 HIS 93 93 93 HIS HIS A . n C 3 94 LEU 94 94 94 LEU LEU A . n C 3 95 THR 95 95 95 THR THR A . n C 3 96 MET 96 96 96 MET MET A . n C 3 97 LYS 97 97 97 LYS LYS A . n C 3 98 PHE 98 98 98 PHE PHE A . n C 3 99 ALA 99 99 99 ALA ALA A . n C 3 100 ASP 100 100 100 ASP ASP A . n C 3 101 GLY 101 101 101 GLY GLY A . n C 3 102 GLN 102 102 102 GLN GLN A . n C 3 103 LEU 103 103 103 LEU LEU A . n C 3 104 ILE 104 104 104 ILE ILE A . n C 3 105 TYR 105 105 105 TYR TYR A . n C 3 106 ALA 106 106 106 ALA ALA A . n C 3 107 ASP 107 107 107 ASP ASP A . n C 3 108 VAL 108 108 108 VAL VAL A . n C 3 109 ARG 109 109 109 ARG ARG A . n C 3 110 LYS 110 110 110 LYS LYS A . n C 3 111 PHE 111 111 111 PHE PHE A . n C 3 112 GLY 112 112 112 GLY GLY A . n C 3 113 THR 113 113 113 THR THR A . n C 3 114 TRP 114 114 114 TRP TRP A . n C 3 115 GLU 115 115 115 GLU GLU A . n C 3 116 LEU 116 116 116 LEU LEU A . n C 3 117 ILE 117 117 117 ILE ILE A . n C 3 118 SER 118 118 118 SER SER A . n C 3 119 THR 119 119 119 THR THR A . n C 3 120 ASP 120 120 120 ASP ASP A . n C 3 121 GLN 121 121 121 GLN GLN A . n C 3 122 VAL 122 122 122 VAL VAL A . n C 3 123 LEU 123 123 123 LEU LEU A . n C 3 124 PRO 124 124 124 PRO PRO A . n C 3 125 TYR 125 125 125 TYR TYR A . n C 3 126 PHE 126 126 126 PHE PHE A . n C 3 127 LEU 127 127 127 LEU LEU A . n C 3 128 LYS 128 128 128 LYS LYS A . n C 3 129 LYS 129 129 129 LYS LYS A . n C 3 130 LYS 130 130 130 LYS LYS A . n C 3 131 ILE 131 131 131 ILE ILE A . n C 3 132 GLY 132 132 132 GLY GLY A . n C 3 133 PRO 133 133 133 PRO PRO A . n C 3 134 GLU 134 134 134 GLU GLU A . n C 3 135 PRO 135 135 135 PRO PRO A . n C 3 136 THR 136 136 136 THR THR A . n C 3 137 TYR 137 137 137 TYR TYR A . n C 3 138 GLU 138 138 138 GLU GLU A . n C 3 139 ASP 139 139 139 ASP ASP A . n C 3 140 PHE 140 140 140 PHE PHE A . n C 3 141 ASP 141 141 141 ASP ASP A . n C 3 142 GLU 142 142 142 GLU GLU A . n C 3 143 LYS 143 143 143 LYS LYS A . n C 3 144 LEU 144 144 144 LEU LEU A . n C 3 145 PHE 145 145 145 PHE PHE A . n C 3 146 ARG 146 146 146 ARG ARG A . n C 3 147 GLU 147 147 147 GLU GLU A . n C 3 148 LYS 148 148 148 LYS LYS A . n C 3 149 LEU 149 149 149 LEU LEU A . n C 3 150 ARG 150 150 150 ARG ARG A . n C 3 151 LYS 151 151 151 LYS LYS A . n C 3 152 SER 152 152 152 SER SER A . n C 3 153 THR 153 153 153 THR THR A . n C 3 154 LYS 154 154 154 LYS LYS A . n C 3 155 LYS 155 155 155 LYS LYS A . n C 3 156 ILE 156 156 156 ILE ILE A . n C 3 157 LYS 157 157 157 LYS LYS A . n C 3 158 PRO 158 158 158 PRO PRO A . n C 3 159 TYR 159 159 159 TYR TYR A . n C 3 160 LEU 160 160 160 LEU LEU A . n C 3 161 LEU 161 161 161 LEU LEU A . n C 3 162 GLU 162 162 162 GLU GLU A . n C 3 163 GLN 163 163 163 GLN GLN A . n C 3 164 THR 164 164 164 THR THR A . n C 3 165 LEU 165 165 165 LEU LEU A . n C 3 166 VAL 166 166 166 VAL VAL A . n C 3 167 ALA 167 167 167 ALA ALA A . n C 3 168 GLY 168 168 168 GLY GLY A . n C 3 169 LEU 169 169 169 LEU LEU A . n C 3 170 GLY 170 170 170 GLY GLY A . n C 3 171 ASN 171 171 171 ASN ASN A . n C 3 172 ILE 172 172 172 ILE ILE A . n C 3 173 TYR 173 173 173 TYR TYR A . n C 3 174 VAL 174 174 174 VAL VAL A . n C 3 175 ASP 175 175 175 ASP ASP A . n C 3 176 GLU 176 176 176 GLU GLU A . n C 3 177 VAL 177 177 177 VAL VAL A . n C 3 178 LEU 178 178 178 LEU LEU A . n C 3 179 TRP 179 179 179 TRP TRP A . n C 3 180 LEU 180 180 180 LEU LEU A . n C 3 181 ALA 181 181 181 ALA ALA A . n C 3 182 LYS 182 182 182 LYS LYS A . n C 3 183 ILE 183 183 183 ILE ILE A . n C 3 184 HIS 184 184 184 HIS HIS A . n C 3 185 PRO 185 185 185 PRO PRO A . n C 3 186 GLU 186 186 186 GLU GLU A . n C 3 187 LYS 187 187 187 LYS LYS A . n C 3 188 GLU 188 188 188 GLU GLU A . n C 3 189 THR 189 189 189 THR THR A . n C 3 190 ASN 190 190 190 ASN ASN A . n C 3 191 GLN 191 191 191 GLN GLN A . n C 3 192 LEU 192 192 192 LEU LEU A . n C 3 193 ILE 193 193 193 ILE ILE A . n C 3 194 GLU 194 194 194 GLU GLU A . n C 3 195 SER 195 195 195 SER SER A . n C 3 196 SER 196 196 196 SER SER A . n C 3 197 ILE 197 197 197 ILE ILE A . n C 3 198 HIS 198 198 198 HIS HIS A . n C 3 199 LEU 199 199 199 LEU LEU A . n C 3 200 LEU 200 200 200 LEU LEU A . n C 3 201 HIS 201 201 201 HIS HIS A . n C 3 202 ASP 202 202 202 ASP ASP A . n C 3 203 SER 203 203 203 SER SER A . n C 3 204 ILE 204 204 204 ILE ILE A . n C 3 205 ILE 205 205 205 ILE ILE A . n C 3 206 GLU 206 206 206 GLU GLU A . n C 3 207 ILE 207 207 207 ILE ILE A . n C 3 208 LEU 208 208 208 LEU LEU A . n C 3 209 GLN 209 209 209 GLN GLN A . n C 3 210 LYS 210 210 210 LYS LYS A . n C 3 211 ALA 211 211 211 ALA ALA A . n C 3 212 ILE 212 212 212 ILE ILE A . n C 3 213 LYS 213 213 213 LYS LYS A . n C 3 214 LEU 214 214 214 LEU LEU A . n C 3 215 GLY 215 215 215 GLY GLY A . n C 3 216 GLY 216 216 216 GLY GLY A . n C 3 217 SER 217 217 217 SER SER A . n C 3 218 SER 218 218 218 SER SER A . n C 3 219 ILE 219 219 ? ? ? A . n C 3 220 ARG 220 220 ? ? ? A . n C 3 221 THR 221 221 ? ? ? A . n C 3 222 TYR 222 222 ? ? ? A . n C 3 223 SER 223 223 223 SER SER A . n C 3 224 ALA 224 224 224 ALA ALA A . n C 3 225 LEU 225 225 225 LEU LEU A . n C 3 226 GLY 226 226 226 GLY GLY A . n C 3 227 SER 227 227 227 SER SER A . n C 3 228 THR 228 228 228 THR THR A . n C 3 229 GLY 229 229 229 GLY GLY A . n C 3 230 LYS 230 230 230 LYS LYS A . n C 3 231 MET 231 231 231 MET MET A . n C 3 232 GLN 232 232 232 GLN GLN A . n C 3 233 ASN 233 233 233 ASN ASN A . n C 3 234 GLU 234 234 234 GLU GLU A . n C 3 235 LEU 235 235 235 LEU LEU A . n C 3 236 GLN 236 236 236 GLN GLN A . n C 3 237 VAL 237 237 237 VAL VAL A . n C 3 238 TYR 238 238 238 TYR TYR A . n C 3 239 GLY 239 239 239 GLY GLY A . n C 3 240 LYS 240 240 240 LYS LYS A . n C 3 241 THR 241 241 241 THR THR A . n C 3 242 GLY 242 242 242 GLY GLY A . n C 3 243 GLU 243 243 243 GLU GLU A . n C 3 244 LYS 244 244 244 LYS LYS A . n C 3 245 CYS 245 245 245 CYS CYS A . n C 3 246 SER 246 246 246 SER SER A . n C 3 247 ARG 247 247 247 ARG ARG A . n C 3 248 CYS 248 248 248 CYS CYS A . n C 3 249 GLY 249 249 249 GLY GLY A . n C 3 250 ALA 250 250 250 ALA ALA A . n C 3 251 GLU 251 251 251 GLU GLU A . n C 3 252 ILE 252 252 252 ILE ILE A . n C 3 253 GLN 253 253 253 GLN GLN A . n C 3 254 LYS 254 254 254 LYS LYS A . n C 3 255 ILE 255 255 255 ILE ILE A . n C 3 256 LYS 256 256 256 LYS LYS A . n C 3 257 VAL 257 257 257 VAL VAL A . n C 3 258 ALA 258 258 258 ALA ALA A . n C 3 259 GLY 259 259 259 GLY GLY A . n C 3 260 ARG 260 260 260 ARG ARG A . n C 3 261 GLY 261 261 261 GLY GLY A . n C 3 262 THR 262 262 262 THR THR A . n C 3 263 HIS 263 263 263 HIS HIS A . n C 3 264 PHE 264 264 264 PHE PHE A . n C 3 265 CYS 265 265 265 CYS CYS A . n C 3 266 PRO 266 266 266 PRO PRO A . n C 3 267 VAL 267 267 267 VAL VAL A . n C 3 268 CYS 268 268 268 CYS CYS A . n C 3 269 GLN 269 269 269 GLN GLN A . n C 3 270 GLN 270 270 270 GLN GLN A . n C 3 271 LYS 271 271 271 LYS LYS A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 ZN 1 300 300 ZN ZN A . E 5 GOL 1 1001 1 GOL CRY A . F 5 GOL 1 1002 2 GOL CRY A . G 5 GOL 1 1003 3 GOL CRY A . H 5 GOL 1 1004 4 GOL CRY A . I 6 HOH 1 15 14 HOH WAT D . I 6 HOH 2 16 20 HOH WAT D . I 6 HOH 3 17 38 HOH WAT D . I 6 HOH 4 18 57 HOH WAT D . I 6 HOH 5 19 78 HOH WAT D . I 6 HOH 6 20 80 HOH WAT D . I 6 HOH 7 21 86 HOH WAT D . I 6 HOH 8 22 90 HOH WAT D . I 6 HOH 9 23 112 HOH WAT D . I 6 HOH 10 24 115 HOH WAT D . I 6 HOH 11 25 116 HOH WAT D . I 6 HOH 12 26 131 HOH WAT D . I 6 HOH 13 27 163 HOH WAT D . I 6 HOH 14 28 166 HOH WAT D . I 6 HOH 15 29 174 HOH WAT D . J 6 HOH 1 61 61 HOH WAT E . J 6 HOH 2 75 75 HOH WAT E . J 6 HOH 3 85 85 HOH WAT E . J 6 HOH 4 136 136 HOH WAT E . J 6 HOH 5 142 142 HOH WAT E . J 6 HOH 6 143 143 HOH WAT E . J 6 HOH 7 156 156 HOH WAT E . J 6 HOH 8 160 160 HOH WAT E . J 6 HOH 9 168 168 HOH WAT E . J 6 HOH 10 182 182 HOH WAT E . J 6 HOH 11 204 204 HOH WAT E . J 6 HOH 12 206 206 HOH WAT E . J 6 HOH 13 207 207 HOH WAT E . J 6 HOH 14 208 208 HOH WAT E . J 6 HOH 15 209 209 HOH WAT E . J 6 HOH 16 212 212 HOH WAT E . J 6 HOH 17 220 220 HOH WAT E . K 6 HOH 1 1005 1 HOH WAT A . K 6 HOH 2 1006 2 HOH WAT A . K 6 HOH 3 1007 3 HOH WAT A . K 6 HOH 4 1008 4 HOH WAT A . K 6 HOH 5 1009 5 HOH WAT A . K 6 HOH 6 1010 6 HOH WAT A . K 6 HOH 7 1011 7 HOH WAT A . K 6 HOH 8 1012 8 HOH WAT A . K 6 HOH 9 1013 9 HOH WAT A . K 6 HOH 10 1014 10 HOH WAT A . K 6 HOH 11 1015 11 HOH WAT A . K 6 HOH 12 1016 12 HOH WAT A . K 6 HOH 13 1017 13 HOH WAT A . K 6 HOH 14 1018 15 HOH WAT A . K 6 HOH 15 1019 16 HOH WAT A . K 6 HOH 16 1020 17 HOH WAT A . K 6 HOH 17 1021 18 HOH WAT A . K 6 HOH 18 1022 19 HOH WAT A . K 6 HOH 19 1023 21 HOH WAT A . K 6 HOH 20 1024 22 HOH WAT A . K 6 HOH 21 1025 23 HOH WAT A . K 6 HOH 22 1026 24 HOH WAT A . K 6 HOH 23 1027 25 HOH WAT A . K 6 HOH 24 1028 26 HOH WAT A . K 6 HOH 25 1029 27 HOH WAT A . K 6 HOH 26 1030 28 HOH WAT A . K 6 HOH 27 1031 29 HOH WAT A . K 6 HOH 28 1032 30 HOH WAT A . K 6 HOH 29 1033 31 HOH WAT A . K 6 HOH 30 1034 32 HOH WAT A . K 6 HOH 31 1035 33 HOH WAT A . K 6 HOH 32 1036 34 HOH WAT A . K 6 HOH 33 1037 35 HOH WAT A . K 6 HOH 34 1038 36 HOH WAT A . K 6 HOH 35 1039 37 HOH WAT A . K 6 HOH 36 1040 39 HOH WAT A . K 6 HOH 37 1041 40 HOH WAT A . K 6 HOH 38 1042 41 HOH WAT A . K 6 HOH 39 1043 42 HOH WAT A . K 6 HOH 40 1044 43 HOH WAT A . K 6 HOH 41 1045 44 HOH WAT A . K 6 HOH 42 1046 45 HOH WAT A . K 6 HOH 43 1047 46 HOH WAT A . K 6 HOH 44 1048 47 HOH WAT A . K 6 HOH 45 1049 48 HOH WAT A . K 6 HOH 46 1050 49 HOH WAT A . K 6 HOH 47 1051 50 HOH WAT A . K 6 HOH 48 1052 51 HOH WAT A . K 6 HOH 49 1053 52 HOH WAT A . K 6 HOH 50 1054 53 HOH WAT A . K 6 HOH 51 1055 54 HOH WAT A . K 6 HOH 52 1056 55 HOH WAT A . K 6 HOH 53 1057 56 HOH WAT A . K 6 HOH 54 1058 58 HOH WAT A . K 6 HOH 55 1059 59 HOH WAT A . K 6 HOH 56 1060 60 HOH WAT A . K 6 HOH 57 1061 62 HOH WAT A . K 6 HOH 58 1062 63 HOH WAT A . K 6 HOH 59 1063 64 HOH WAT A . K 6 HOH 60 1064 65 HOH WAT A . K 6 HOH 61 1065 66 HOH WAT A . K 6 HOH 62 1066 67 HOH WAT A . K 6 HOH 63 1067 68 HOH WAT A . K 6 HOH 64 1068 69 HOH WAT A . K 6 HOH 65 1069 70 HOH WAT A . K 6 HOH 66 1070 71 HOH WAT A . K 6 HOH 67 1071 72 HOH WAT A . K 6 HOH 68 1072 73 HOH WAT A . K 6 HOH 69 1073 74 HOH WAT A . K 6 HOH 70 1074 76 HOH WAT A . K 6 HOH 71 1075 77 HOH WAT A . K 6 HOH 72 1076 79 HOH WAT A . K 6 HOH 73 1077 81 HOH WAT A . K 6 HOH 74 1078 82 HOH WAT A . K 6 HOH 75 1079 83 HOH WAT A . K 6 HOH 76 1080 84 HOH WAT A . K 6 HOH 77 1081 87 HOH WAT A . K 6 HOH 78 1082 88 HOH WAT A . K 6 HOH 79 1083 89 HOH WAT A . K 6 HOH 80 1084 91 HOH WAT A . K 6 HOH 81 1085 92 HOH WAT A . K 6 HOH 82 1086 93 HOH WAT A . K 6 HOH 83 1087 94 HOH WAT A . K 6 HOH 84 1088 95 HOH WAT A . K 6 HOH 85 1089 96 HOH WAT A . K 6 HOH 86 1090 97 HOH WAT A . K 6 HOH 87 1091 98 HOH WAT A . K 6 HOH 88 1092 99 HOH WAT A . K 6 HOH 89 1093 100 HOH WAT A . K 6 HOH 90 1094 101 HOH WAT A . K 6 HOH 91 1095 102 HOH WAT A . K 6 HOH 92 1096 103 HOH WAT A . K 6 HOH 93 1097 104 HOH WAT A . K 6 HOH 94 1098 105 HOH WAT A . K 6 HOH 95 1099 106 HOH WAT A . K 6 HOH 96 1100 107 HOH WAT A . K 6 HOH 97 1101 108 HOH WAT A . K 6 HOH 98 1102 109 HOH WAT A . K 6 HOH 99 1103 110 HOH WAT A . K 6 HOH 100 1104 111 HOH WAT A . K 6 HOH 101 1105 113 HOH WAT A . K 6 HOH 102 1106 114 HOH WAT A . K 6 HOH 103 1107 117 HOH WAT A . K 6 HOH 104 1108 118 HOH WAT A . K 6 HOH 105 1109 119 HOH WAT A . K 6 HOH 106 1110 120 HOH WAT A . K 6 HOH 107 1111 121 HOH WAT A . K 6 HOH 108 1112 122 HOH WAT A . K 6 HOH 109 1113 123 HOH WAT A . K 6 HOH 110 1114 124 HOH WAT A . K 6 HOH 111 1115 125 HOH WAT A . K 6 HOH 112 1116 126 HOH WAT A . K 6 HOH 113 1117 127 HOH WAT A . K 6 HOH 114 1118 128 HOH WAT A . K 6 HOH 115 1119 129 HOH WAT A . K 6 HOH 116 1120 130 HOH WAT A . K 6 HOH 117 1121 132 HOH WAT A . K 6 HOH 118 1122 133 HOH WAT A . K 6 HOH 119 1123 134 HOH WAT A . K 6 HOH 120 1124 135 HOH WAT A . K 6 HOH 121 1125 137 HOH WAT A . K 6 HOH 122 1126 138 HOH WAT A . K 6 HOH 123 1127 139 HOH WAT A . K 6 HOH 124 1128 140 HOH WAT A . K 6 HOH 125 1129 141 HOH WAT A . K 6 HOH 126 1130 144 HOH WAT A . K 6 HOH 127 1131 145 HOH WAT A . K 6 HOH 128 1132 146 HOH WAT A . K 6 HOH 129 1133 147 HOH WAT A . K 6 HOH 130 1134 148 HOH WAT A . K 6 HOH 131 1135 149 HOH WAT A . K 6 HOH 132 1136 150 HOH WAT A . K 6 HOH 133 1137 151 HOH WAT A . K 6 HOH 134 1138 152 HOH WAT A . K 6 HOH 135 1139 153 HOH WAT A . K 6 HOH 136 1140 154 HOH WAT A . K 6 HOH 137 1141 155 HOH WAT A . K 6 HOH 138 1142 157 HOH WAT A . K 6 HOH 139 1143 158 HOH WAT A . K 6 HOH 140 1144 159 HOH WAT A . K 6 HOH 141 1145 161 HOH WAT A . K 6 HOH 142 1146 162 HOH WAT A . K 6 HOH 143 1147 164 HOH WAT A . K 6 HOH 144 1148 165 HOH WAT A . K 6 HOH 145 1149 167 HOH WAT A . K 6 HOH 146 1150 169 HOH WAT A . K 6 HOH 147 1151 170 HOH WAT A . K 6 HOH 148 1152 171 HOH WAT A . K 6 HOH 149 1153 172 HOH WAT A . K 6 HOH 150 1154 173 HOH WAT A . K 6 HOH 151 1155 175 HOH WAT A . K 6 HOH 152 1156 176 HOH WAT A . K 6 HOH 153 1157 177 HOH WAT A . K 6 HOH 154 1158 178 HOH WAT A . K 6 HOH 155 1159 179 HOH WAT A . K 6 HOH 156 1160 180 HOH WAT A . K 6 HOH 157 1161 181 HOH WAT A . K 6 HOH 158 1162 183 HOH WAT A . K 6 HOH 159 1163 184 HOH WAT A . K 6 HOH 160 1164 185 HOH WAT A . K 6 HOH 161 1165 186 HOH WAT A . K 6 HOH 162 1166 187 HOH WAT A . K 6 HOH 163 1167 188 HOH WAT A . K 6 HOH 164 1168 189 HOH WAT A . K 6 HOH 165 1169 190 HOH WAT A . K 6 HOH 166 1170 191 HOH WAT A . K 6 HOH 167 1171 192 HOH WAT A . K 6 HOH 168 1172 193 HOH WAT A . K 6 HOH 169 1173 194 HOH WAT A . K 6 HOH 170 1174 195 HOH WAT A . K 6 HOH 171 1175 196 HOH WAT A . K 6 HOH 172 1176 197 HOH WAT A . K 6 HOH 173 1177 198 HOH WAT A . K 6 HOH 174 1178 199 HOH WAT A . K 6 HOH 175 1179 200 HOH WAT A . K 6 HOH 176 1180 201 HOH WAT A . K 6 HOH 177 1181 202 HOH WAT A . K 6 HOH 178 1182 203 HOH WAT A . K 6 HOH 179 1183 205 HOH WAT A . K 6 HOH 180 1184 210 HOH WAT A . K 6 HOH 181 1185 211 HOH WAT A . K 6 HOH 182 1186 213 HOH WAT A . K 6 HOH 183 1187 214 HOH WAT A . K 6 HOH 184 1188 215 HOH WAT A . K 6 HOH 185 1189 216 HOH WAT A . K 6 HOH 186 1190 217 HOH WAT A . K 6 HOH 187 1191 218 HOH WAT A . K 6 HOH 188 1192 219 HOH WAT A . K 6 HOH 189 1193 221 HOH WAT A . K 6 HOH 190 1194 222 HOH WAT A . K 6 HOH 191 1195 223 HOH WAT A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? C CYS 245 ? A CYS 245 ? 1_555 ZN ? D ZN . ? A ZN 300 ? 1_555 SG ? C CYS 248 ? A CYS 248 ? 1_555 112.4 ? 2 SG ? C CYS 245 ? A CYS 245 ? 1_555 ZN ? D ZN . ? A ZN 300 ? 1_555 SG ? C CYS 265 ? A CYS 265 ? 1_555 112.3 ? 3 SG ? C CYS 248 ? A CYS 248 ? 1_555 ZN ? D ZN . ? A ZN 300 ? 1_555 SG ? C CYS 265 ? A CYS 265 ? 1_555 97.7 ? 4 SG ? C CYS 245 ? A CYS 245 ? 1_555 ZN ? D ZN . ? A ZN 300 ? 1_555 SG ? C CYS 268 ? A CYS 268 ? 1_555 105.4 ? 5 SG ? C CYS 248 ? A CYS 248 ? 1_555 ZN ? D ZN . ? A ZN 300 ? 1_555 SG ? C CYS 268 ? A CYS 268 ? 1_555 114.5 ? 6 SG ? C CYS 265 ? A CYS 265 ? 1_555 ZN ? D ZN . ? A ZN 300 ? 1_555 SG ? C CYS 268 ? A CYS 268 ? 1_555 114.7 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-08-03 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 2 0 2023-08-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Non-polymer description' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Atomic model' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Database references' 7 4 'Structure model' 'Derived calculations' 8 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' atom_site 2 4 'Structure model' chem_comp_atom 3 4 'Structure model' chem_comp_bond 4 4 'Structure model' database_2 5 4 'Structure model' pdbx_initial_refinement_model 6 4 'Structure model' struct_conn 7 4 'Structure model' struct_conn_type 8 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_atom_site.occupancy' 2 4 'Structure model' '_database_2.pdbx_DOI' 3 4 'Structure model' '_database_2.pdbx_database_accession' 4 4 'Structure model' '_struct_conn.conn_type_id' 5 4 'Structure model' '_struct_conn.id' 6 4 'Structure model' '_struct_conn.pdbx_dist_value' 7 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 8 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 9 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 10 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 11 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 12 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 13 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 14 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 15 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 16 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 17 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 18 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 19 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 20 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 21 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 22 4 'Structure model' '_struct_conn_type.id' 23 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 24 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 25 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 AMoRE phasing . ? 3 CNS refinement 'version 1.1' ? 4 # _pdbx_database_remark.id 999 _pdbx_database_remark.text ;sequence The author maintains that the sequence database residue Asp139 is an error. This residue does not exist. ; # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 1191 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 1191 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 8_555 _pdbx_validate_symm_contact.dist 0.31 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 74 ? ? 50.83 -126.35 2 1 ARG A 74 ? ? 51.52 -126.35 3 1 ALA A 224 ? ? -173.75 107.50 4 1 VAL A 237 ? ? -137.82 -37.81 5 1 GLN A 269 ? ? -116.47 77.65 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 88 ? CG ? C ARG 88 CG 2 1 Y 1 A ARG 88 ? CD ? C ARG 88 CD 3 1 Y 1 A ARG 88 ? NE ? C ARG 88 NE 4 1 Y 1 A ARG 88 ? CZ ? C ARG 88 CZ 5 1 Y 1 A ARG 88 ? NH1 ? C ARG 88 NH1 6 1 Y 1 A ARG 88 ? NH2 ? C ARG 88 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ILE 219 ? C ILE 219 2 1 Y 1 A ARG 220 ? C ARG 220 3 1 Y 1 A THR 221 ? C THR 221 4 1 Y 1 A TYR 222 ? C TYR 222 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 GOL C1 C N N 280 GOL O1 O N N 281 GOL C2 C N N 282 GOL O2 O N N 283 GOL C3 C N N 284 GOL O3 O N N 285 GOL H11 H N N 286 GOL H12 H N N 287 GOL HO1 H N N 288 GOL H2 H N N 289 GOL HO2 H N N 290 GOL H31 H N N 291 GOL H32 H N N 292 GOL HO3 H N N 293 HIS N N N N 294 HIS CA C N S 295 HIS C C N N 296 HIS O O N N 297 HIS CB C N N 298 HIS CG C Y N 299 HIS ND1 N Y N 300 HIS CD2 C Y N 301 HIS CE1 C Y N 302 HIS NE2 N Y N 303 HIS OXT O N N 304 HIS H H N N 305 HIS H2 H N N 306 HIS HA H N N 307 HIS HB2 H N N 308 HIS HB3 H N N 309 HIS HD1 H N N 310 HIS HD2 H N N 311 HIS HE1 H N N 312 HIS HE2 H N N 313 HIS HXT H N N 314 HOH O O N N 315 HOH H1 H N N 316 HOH H2 H N N 317 ILE N N N N 318 ILE CA C N S 319 ILE C C N N 320 ILE O O N N 321 ILE CB C N S 322 ILE CG1 C N N 323 ILE CG2 C N N 324 ILE CD1 C N N 325 ILE OXT O N N 326 ILE H H N N 327 ILE H2 H N N 328 ILE HA H N N 329 ILE HB H N N 330 ILE HG12 H N N 331 ILE HG13 H N N 332 ILE HG21 H N N 333 ILE HG22 H N N 334 ILE HG23 H N N 335 ILE HD11 H N N 336 ILE HD12 H N N 337 ILE HD13 H N N 338 ILE HXT H N N 339 LEU N N N N 340 LEU CA C N S 341 LEU C C N N 342 LEU O O N N 343 LEU CB C N N 344 LEU CG C N N 345 LEU CD1 C N N 346 LEU CD2 C N N 347 LEU OXT O N N 348 LEU H H N N 349 LEU H2 H N N 350 LEU HA H N N 351 LEU HB2 H N N 352 LEU HB3 H N N 353 LEU HG H N N 354 LEU HD11 H N N 355 LEU HD12 H N N 356 LEU HD13 H N N 357 LEU HD21 H N N 358 LEU HD22 H N N 359 LEU HD23 H N N 360 LEU HXT H N N 361 LYS N N N N 362 LYS CA C N S 363 LYS C C N N 364 LYS O O N N 365 LYS CB C N N 366 LYS CG C N N 367 LYS CD C N N 368 LYS CE C N N 369 LYS NZ N N N 370 LYS OXT O N N 371 LYS H H N N 372 LYS H2 H N N 373 LYS HA H N N 374 LYS HB2 H N N 375 LYS HB3 H N N 376 LYS HG2 H N N 377 LYS HG3 H N N 378 LYS HD2 H N N 379 LYS HD3 H N N 380 LYS HE2 H N N 381 LYS HE3 H N N 382 LYS HZ1 H N N 383 LYS HZ2 H N N 384 LYS HZ3 H N N 385 LYS HXT H N N 386 MET N N N N 387 MET CA C N S 388 MET C C N N 389 MET O O N N 390 MET CB C N N 391 MET CG C N N 392 MET SD S N N 393 MET CE C N N 394 MET OXT O N N 395 MET H H N N 396 MET H2 H N N 397 MET HA H N N 398 MET HB2 H N N 399 MET HB3 H N N 400 MET HG2 H N N 401 MET HG3 H N N 402 MET HE1 H N N 403 MET HE2 H N N 404 MET HE3 H N N 405 MET HXT H N N 406 PDI O3P O N N 407 PDI P P N N 408 PDI O1P O N N 409 PDI O2P O N N 410 PDI OA O N N 411 PDI CA C N N 412 PDI CB C N N 413 PDI CG C N N 414 PDI OG O N N 415 PDI HOP3 H N N 416 PDI HOP2 H N N 417 PDI HA1 H N N 418 PDI HA2 H N N 419 PDI HB1 H N N 420 PDI HB2 H N N 421 PDI HG1 H N N 422 PDI HG2 H N N 423 PDI HGT H N N 424 PHE N N N N 425 PHE CA C N S 426 PHE C C N N 427 PHE O O N N 428 PHE CB C N N 429 PHE CG C Y N 430 PHE CD1 C Y N 431 PHE CD2 C Y N 432 PHE CE1 C Y N 433 PHE CE2 C Y N 434 PHE CZ C Y N 435 PHE OXT O N N 436 PHE H H N N 437 PHE H2 H N N 438 PHE HA H N N 439 PHE HB2 H N N 440 PHE HB3 H N N 441 PHE HD1 H N N 442 PHE HD2 H N N 443 PHE HE1 H N N 444 PHE HE2 H N N 445 PHE HZ H N N 446 PHE HXT H N N 447 PRO N N N N 448 PRO CA C N S 449 PRO C C N N 450 PRO O O N N 451 PRO CB C N N 452 PRO CG C N N 453 PRO CD C N N 454 PRO OXT O N N 455 PRO H H N N 456 PRO HA H N N 457 PRO HB2 H N N 458 PRO HB3 H N N 459 PRO HG2 H N N 460 PRO HG3 H N N 461 PRO HD2 H N N 462 PRO HD3 H N N 463 PRO HXT H N N 464 SER N N N N 465 SER CA C N S 466 SER C C N N 467 SER O O N N 468 SER CB C N N 469 SER OG O N N 470 SER OXT O N N 471 SER H H N N 472 SER H2 H N N 473 SER HA H N N 474 SER HB2 H N N 475 SER HB3 H N N 476 SER HG H N N 477 SER HXT H N N 478 THR N N N N 479 THR CA C N S 480 THR C C N N 481 THR O O N N 482 THR CB C N R 483 THR OG1 O N N 484 THR CG2 C N N 485 THR OXT O N N 486 THR H H N N 487 THR H2 H N N 488 THR HA H N N 489 THR HB H N N 490 THR HG1 H N N 491 THR HG21 H N N 492 THR HG22 H N N 493 THR HG23 H N N 494 THR HXT H N N 495 TRP N N N N 496 TRP CA C N S 497 TRP C C N N 498 TRP O O N N 499 TRP CB C N N 500 TRP CG C Y N 501 TRP CD1 C Y N 502 TRP CD2 C Y N 503 TRP NE1 N Y N 504 TRP CE2 C Y N 505 TRP CE3 C Y N 506 TRP CZ2 C Y N 507 TRP CZ3 C Y N 508 TRP CH2 C Y N 509 TRP OXT O N N 510 TRP H H N N 511 TRP H2 H N N 512 TRP HA H N N 513 TRP HB2 H N N 514 TRP HB3 H N N 515 TRP HD1 H N N 516 TRP HE1 H N N 517 TRP HE3 H N N 518 TRP HZ2 H N N 519 TRP HZ3 H N N 520 TRP HH2 H N N 521 TRP HXT H N N 522 TYR N N N N 523 TYR CA C N S 524 TYR C C N N 525 TYR O O N N 526 TYR CB C N N 527 TYR CG C Y N 528 TYR CD1 C Y N 529 TYR CD2 C Y N 530 TYR CE1 C Y N 531 TYR CE2 C Y N 532 TYR CZ C Y N 533 TYR OH O N N 534 TYR OXT O N N 535 TYR H H N N 536 TYR H2 H N N 537 TYR HA H N N 538 TYR HB2 H N N 539 TYR HB3 H N N 540 TYR HD1 H N N 541 TYR HD2 H N N 542 TYR HE1 H N N 543 TYR HE2 H N N 544 TYR HH H N N 545 TYR HXT H N N 546 VAL N N N N 547 VAL CA C N S 548 VAL C C N N 549 VAL O O N N 550 VAL CB C N N 551 VAL CG1 C N N 552 VAL CG2 C N N 553 VAL OXT O N N 554 VAL H H N N 555 VAL H2 H N N 556 VAL HA H N N 557 VAL HB H N N 558 VAL HG11 H N N 559 VAL HG12 H N N 560 VAL HG13 H N N 561 VAL HG21 H N N 562 VAL HG22 H N N 563 VAL HG23 H N N 564 VAL HXT H N N 565 ZN ZN ZN N N 566 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 GOL C1 O1 sing N N 278 GOL C1 C2 sing N N 279 GOL C1 H11 sing N N 280 GOL C1 H12 sing N N 281 GOL O1 HO1 sing N N 282 GOL C2 O2 sing N N 283 GOL C2 C3 sing N N 284 GOL C2 H2 sing N N 285 GOL O2 HO2 sing N N 286 GOL C3 O3 sing N N 287 GOL C3 H31 sing N N 288 GOL C3 H32 sing N N 289 GOL O3 HO3 sing N N 290 HIS N CA sing N N 291 HIS N H sing N N 292 HIS N H2 sing N N 293 HIS CA C sing N N 294 HIS CA CB sing N N 295 HIS CA HA sing N N 296 HIS C O doub N N 297 HIS C OXT sing N N 298 HIS CB CG sing N N 299 HIS CB HB2 sing N N 300 HIS CB HB3 sing N N 301 HIS CG ND1 sing Y N 302 HIS CG CD2 doub Y N 303 HIS ND1 CE1 doub Y N 304 HIS ND1 HD1 sing N N 305 HIS CD2 NE2 sing Y N 306 HIS CD2 HD2 sing N N 307 HIS CE1 NE2 sing Y N 308 HIS CE1 HE1 sing N N 309 HIS NE2 HE2 sing N N 310 HIS OXT HXT sing N N 311 HOH O H1 sing N N 312 HOH O H2 sing N N 313 ILE N CA sing N N 314 ILE N H sing N N 315 ILE N H2 sing N N 316 ILE CA C sing N N 317 ILE CA CB sing N N 318 ILE CA HA sing N N 319 ILE C O doub N N 320 ILE C OXT sing N N 321 ILE CB CG1 sing N N 322 ILE CB CG2 sing N N 323 ILE CB HB sing N N 324 ILE CG1 CD1 sing N N 325 ILE CG1 HG12 sing N N 326 ILE CG1 HG13 sing N N 327 ILE CG2 HG21 sing N N 328 ILE CG2 HG22 sing N N 329 ILE CG2 HG23 sing N N 330 ILE CD1 HD11 sing N N 331 ILE CD1 HD12 sing N N 332 ILE CD1 HD13 sing N N 333 ILE OXT HXT sing N N 334 LEU N CA sing N N 335 LEU N H sing N N 336 LEU N H2 sing N N 337 LEU CA C sing N N 338 LEU CA CB sing N N 339 LEU CA HA sing N N 340 LEU C O doub N N 341 LEU C OXT sing N N 342 LEU CB CG sing N N 343 LEU CB HB2 sing N N 344 LEU CB HB3 sing N N 345 LEU CG CD1 sing N N 346 LEU CG CD2 sing N N 347 LEU CG HG sing N N 348 LEU CD1 HD11 sing N N 349 LEU CD1 HD12 sing N N 350 LEU CD1 HD13 sing N N 351 LEU CD2 HD21 sing N N 352 LEU CD2 HD22 sing N N 353 LEU CD2 HD23 sing N N 354 LEU OXT HXT sing N N 355 LYS N CA sing N N 356 LYS N H sing N N 357 LYS N H2 sing N N 358 LYS CA C sing N N 359 LYS CA CB sing N N 360 LYS CA HA sing N N 361 LYS C O doub N N 362 LYS C OXT sing N N 363 LYS CB CG sing N N 364 LYS CB HB2 sing N N 365 LYS CB HB3 sing N N 366 LYS CG CD sing N N 367 LYS CG HG2 sing N N 368 LYS CG HG3 sing N N 369 LYS CD CE sing N N 370 LYS CD HD2 sing N N 371 LYS CD HD3 sing N N 372 LYS CE NZ sing N N 373 LYS CE HE2 sing N N 374 LYS CE HE3 sing N N 375 LYS NZ HZ1 sing N N 376 LYS NZ HZ2 sing N N 377 LYS NZ HZ3 sing N N 378 LYS OXT HXT sing N N 379 MET N CA sing N N 380 MET N H sing N N 381 MET N H2 sing N N 382 MET CA C sing N N 383 MET CA CB sing N N 384 MET CA HA sing N N 385 MET C O doub N N 386 MET C OXT sing N N 387 MET CB CG sing N N 388 MET CB HB2 sing N N 389 MET CB HB3 sing N N 390 MET CG SD sing N N 391 MET CG HG2 sing N N 392 MET CG HG3 sing N N 393 MET SD CE sing N N 394 MET CE HE1 sing N N 395 MET CE HE2 sing N N 396 MET CE HE3 sing N N 397 MET OXT HXT sing N N 398 PDI O3P P sing N N 399 PDI O3P HOP3 sing N N 400 PDI P O1P doub N N 401 PDI P O2P sing N N 402 PDI P OA sing N N 403 PDI O2P HOP2 sing N N 404 PDI OA CA sing N N 405 PDI CA CB sing N N 406 PDI CA HA1 sing N N 407 PDI CA HA2 sing N N 408 PDI CB CG sing N N 409 PDI CB HB1 sing N N 410 PDI CB HB2 sing N N 411 PDI CG OG sing N N 412 PDI CG HG1 sing N N 413 PDI CG HG2 sing N N 414 PDI OG HGT sing N N 415 PHE N CA sing N N 416 PHE N H sing N N 417 PHE N H2 sing N N 418 PHE CA C sing N N 419 PHE CA CB sing N N 420 PHE CA HA sing N N 421 PHE C O doub N N 422 PHE C OXT sing N N 423 PHE CB CG sing N N 424 PHE CB HB2 sing N N 425 PHE CB HB3 sing N N 426 PHE CG CD1 doub Y N 427 PHE CG CD2 sing Y N 428 PHE CD1 CE1 sing Y N 429 PHE CD1 HD1 sing N N 430 PHE CD2 CE2 doub Y N 431 PHE CD2 HD2 sing N N 432 PHE CE1 CZ doub Y N 433 PHE CE1 HE1 sing N N 434 PHE CE2 CZ sing Y N 435 PHE CE2 HE2 sing N N 436 PHE CZ HZ sing N N 437 PHE OXT HXT sing N N 438 PRO N CA sing N N 439 PRO N CD sing N N 440 PRO N H sing N N 441 PRO CA C sing N N 442 PRO CA CB sing N N 443 PRO CA HA sing N N 444 PRO C O doub N N 445 PRO C OXT sing N N 446 PRO CB CG sing N N 447 PRO CB HB2 sing N N 448 PRO CB HB3 sing N N 449 PRO CG CD sing N N 450 PRO CG HG2 sing N N 451 PRO CG HG3 sing N N 452 PRO CD HD2 sing N N 453 PRO CD HD3 sing N N 454 PRO OXT HXT sing N N 455 SER N CA sing N N 456 SER N H sing N N 457 SER N H2 sing N N 458 SER CA C sing N N 459 SER CA CB sing N N 460 SER CA HA sing N N 461 SER C O doub N N 462 SER C OXT sing N N 463 SER CB OG sing N N 464 SER CB HB2 sing N N 465 SER CB HB3 sing N N 466 SER OG HG sing N N 467 SER OXT HXT sing N N 468 THR N CA sing N N 469 THR N H sing N N 470 THR N H2 sing N N 471 THR CA C sing N N 472 THR CA CB sing N N 473 THR CA HA sing N N 474 THR C O doub N N 475 THR C OXT sing N N 476 THR CB OG1 sing N N 477 THR CB CG2 sing N N 478 THR CB HB sing N N 479 THR OG1 HG1 sing N N 480 THR CG2 HG21 sing N N 481 THR CG2 HG22 sing N N 482 THR CG2 HG23 sing N N 483 THR OXT HXT sing N N 484 TRP N CA sing N N 485 TRP N H sing N N 486 TRP N H2 sing N N 487 TRP CA C sing N N 488 TRP CA CB sing N N 489 TRP CA HA sing N N 490 TRP C O doub N N 491 TRP C OXT sing N N 492 TRP CB CG sing N N 493 TRP CB HB2 sing N N 494 TRP CB HB3 sing N N 495 TRP CG CD1 doub Y N 496 TRP CG CD2 sing Y N 497 TRP CD1 NE1 sing Y N 498 TRP CD1 HD1 sing N N 499 TRP CD2 CE2 doub Y N 500 TRP CD2 CE3 sing Y N 501 TRP NE1 CE2 sing Y N 502 TRP NE1 HE1 sing N N 503 TRP CE2 CZ2 sing Y N 504 TRP CE3 CZ3 doub Y N 505 TRP CE3 HE3 sing N N 506 TRP CZ2 CH2 doub Y N 507 TRP CZ2 HZ2 sing N N 508 TRP CZ3 CH2 sing Y N 509 TRP CZ3 HZ3 sing N N 510 TRP CH2 HH2 sing N N 511 TRP OXT HXT sing N N 512 TYR N CA sing N N 513 TYR N H sing N N 514 TYR N H2 sing N N 515 TYR CA C sing N N 516 TYR CA CB sing N N 517 TYR CA HA sing N N 518 TYR C O doub N N 519 TYR C OXT sing N N 520 TYR CB CG sing N N 521 TYR CB HB2 sing N N 522 TYR CB HB3 sing N N 523 TYR CG CD1 doub Y N 524 TYR CG CD2 sing Y N 525 TYR CD1 CE1 sing Y N 526 TYR CD1 HD1 sing N N 527 TYR CD2 CE2 doub Y N 528 TYR CD2 HD2 sing N N 529 TYR CE1 CZ doub Y N 530 TYR CE1 HE1 sing N N 531 TYR CE2 CZ sing Y N 532 TYR CE2 HE2 sing N N 533 TYR CZ OH sing N N 534 TYR OH HH sing N N 535 TYR OXT HXT sing N N 536 VAL N CA sing N N 537 VAL N H sing N N 538 VAL N H2 sing N N 539 VAL CA C sing N N 540 VAL CA CB sing N N 541 VAL CA HA sing N N 542 VAL C O doub N N 543 VAL C OXT sing N N 544 VAL CB CG1 sing N N 545 VAL CB CG2 sing N N 546 VAL CB HB sing N N 547 VAL CG1 HG11 sing N N 548 VAL CG1 HG12 sing N N 549 VAL CG1 HG13 sing N N 550 VAL CG2 HG21 sing N N 551 VAL CG2 HG22 sing N N 552 VAL CG2 HG23 sing N N 553 VAL OXT HXT sing N N 554 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1PJI 'b-form double helix' 1PJI 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DT 2 1_555 B DA 14 1_555 -0.255 -0.013 0.033 -0.248 -6.965 1.257 1 D_DT2:DA28_E D 2 ? E 28 ? 20 1 1 A DC 3 1_555 B DG 13 1_555 0.120 -0.127 -0.023 0.691 -7.485 0.340 2 D_DC3:DG27_E D 3 ? E 27 ? 19 1 1 A DT 4 1_555 B DA 12 1_555 -0.146 0.001 0.061 -2.976 -8.663 2.452 3 D_DT4:DA26_E D 4 ? E 26 ? 20 1 1 A DT 5 1_555 B DA 11 1_555 -0.077 -0.143 -0.181 2.181 -6.436 4.712 4 D_DT5:DA25_E D 5 ? E 25 ? 20 1 1 A DT 6 1_555 B DA 10 1_555 -0.036 -0.044 -0.391 16.077 2.082 -0.061 5 D_DT6:DA24_E D 6 ? E 24 ? 20 1 1 A DT 8 1_555 B DA 8 1_555 -0.081 -0.106 -0.041 -8.482 -1.307 -0.289 6 D_DT8:DA22_E D 8 ? E 22 ? 20 1 1 A DT 9 1_555 B DA 7 1_555 -0.110 0.000 -0.318 1.023 -9.520 -0.743 7 D_DT9:DA21_E D 9 ? E 21 ? 20 1 1 A DT 10 1_555 B DA 6 1_555 -0.106 -0.063 -0.205 3.457 -4.841 -0.016 8 D_DT10:DA20_E D 10 ? E 20 ? 20 1 1 A DC 11 1_555 B DG 5 1_555 0.217 -0.039 -0.180 2.483 -12.432 -1.857 9 D_DC11:DG19_E D 11 ? E 19 ? 19 1 1 A DT 12 1_555 B DA 4 1_555 0.572 0.091 0.492 -4.639 -16.181 5.231 10 D_DT12:DA18_E D 12 ? E 18 ? 20 1 1 A DC 13 1_555 B DG 3 1_555 0.248 -0.064 0.092 -3.217 -11.868 0.481 11 D_DC13:DG17_E D 13 ? E 17 ? 19 1 1 A DG 14 1_555 B DC 2 1_555 0.095 -0.097 -0.308 -2.228 -6.885 1.512 12 D_DG14:DC16_E D 14 ? E 16 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DT 2 1_555 B DA 14 1_555 A DC 3 1_555 B DG 13 1_555 0.541 -0.177 3.315 2.067 2.569 38.255 -0.595 -0.560 3.320 3.912 -3.148 38.391 1 DD_DT2DC3:DG27DA28_EE D 2 ? E 28 ? D 3 ? E 27 ? 1 A DC 3 1_555 B DG 13 1_555 A DT 4 1_555 B DA 12 1_555 0.261 -0.584 3.413 1.416 5.715 32.030 -2.069 -0.211 3.271 10.249 -2.539 32.552 2 DD_DC3DT4:DA26DG27_EE D 3 ? E 27 ? D 4 ? E 26 ? 1 A DT 4 1_555 B DA 12 1_555 A DT 5 1_555 B DA 11 1_555 0.059 -0.212 3.187 0.628 4.142 33.325 -1.026 -0.003 3.140 7.186 -1.089 33.580 3 DD_DT4DT5:DA25DA26_EE D 4 ? E 26 ? D 5 ? E 25 ? 1 A DT 5 1_555 B DA 11 1_555 A DT 6 1_555 B DA 10 1_555 -0.094 0.124 3.200 2.716 11.134 26.638 -2.183 0.782 2.987 22.867 -5.578 28.958 4 DD_DT5DT6:DA24DA25_EE D 5 ? E 25 ? D 6 ? E 24 ? 1 A DT 8 1_555 B DA 8 1_555 A DT 9 1_555 B DA 7 1_555 0.078 -0.106 3.134 1.506 2.506 29.925 -0.696 0.144 3.115 4.838 -2.908 30.064 5 DD_DT8DT9:DA21DA22_EE D 8 ? E 22 ? D 9 ? E 21 ? 1 A DT 9 1_555 B DA 7 1_555 A DT 10 1_555 B DA 6 1_555 0.862 0.053 3.353 1.860 3.513 35.025 -0.450 -1.139 3.382 5.814 -3.078 35.243 6 DD_DT9DT10:DA20DA21_EE D 9 ? E 21 ? D 10 ? E 20 ? 1 A DT 10 1_555 B DA 6 1_555 A DC 11 1_555 B DG 5 1_555 -0.826 -0.287 3.400 -2.477 -1.216 34.538 -0.286 0.987 3.457 -2.044 4.164 34.644 7 DD_DT10DC11:DG19DA20_EE D 10 ? E 20 ? D 11 ? E 19 ? 1 A DC 11 1_555 B DG 5 1_555 A DT 12 1_555 B DA 4 1_555 -0.360 -0.212 3.647 -1.884 3.782 34.982 -0.977 0.282 3.618 6.262 3.120 35.228 8 DD_DC11DT12:DA18DG19_EE D 11 ? E 19 ? D 12 ? E 18 ? 1 A DT 12 1_555 B DA 4 1_555 A DC 13 1_555 B DG 3 1_555 -0.058 -0.052 3.141 2.724 5.061 32.679 -0.907 0.539 3.084 8.908 -4.794 33.167 9 DD_DT12DC13:DG17DA18_EE D 12 ? E 18 ? D 13 ? E 17 ? 1 A DC 13 1_555 B DG 3 1_555 A DG 14 1_555 B DC 2 1_555 0.484 0.754 3.414 4.004 10.324 32.686 -0.475 -0.138 3.518 17.722 -6.873 34.462 10 DD_DC13DG14:DC16DG17_EE D 13 ? E 17 ? D 14 ? E 16 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'ZINC ION' ZN 5 GLYCEROL GOL 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1KFV _pdbx_initial_refinement_model.details ? #