data_1PUF # _entry.id 1PUF # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.376 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1PUF pdb_00001puf 10.2210/pdb1puf/pdb NDB PD0455 ? ? RCSB RCSB019574 ? ? WWPDB D_1000019574 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1PUF _pdbx_database_status.recvd_initial_deposition_date 2003-06-24 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Laronde-Leblanc, N.A.' 1 'Wolberger, C.' 2 # _citation.id primary _citation.title 'STRUCTURE OF HOXA9 AND PBX1 BOUND TO DNA: HOX HEXAPEPTIDE AND DNA RECOGNITION ANTERIOR TO POSTERIOR' _citation.journal_abbrev 'Genes Dev.' _citation.journal_volume 17 _citation.page_first 2060 _citation.page_last 2072 _citation.year 2003 _citation.journal_id_ASTM GEDEEP _citation.country US _citation.journal_id_ISSN 0890-9369 _citation.journal_id_CSD 2056 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12923056 _citation.pdbx_database_id_DOI 10.1101/gad.1103303 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'LARONDE-LEBLANC, N.A.' 1 ? primary 'Wolberger, C.' 2 ? # _cell.entry_id 1PUF _cell.length_a 60.769 _cell.length_b 114.853 _cell.length_c 108.170 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1PUF _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*AP*CP*TP*CP*TP*AP*TP*GP*AP*TP*TP*TP*AP*CP*GP*AP*CP*GP*CP*T)-3'" 6083.953 1 ? ? ? ? 2 polymer syn "5'-D(*TP*AP*GP*CP*GP*TP*CP*GP*TP*AP*AP*AP*TP*CP*AP*TP*AP*GP*AP*G)-3'" 6182.029 1 ? ? ? ? 3 polymer man 'Homeobox protein Hox-A9' 9646.336 1 ? ? 'residues 193-269' Homeodomain 4 polymer man 'Pre-B-cell leukemia transcription factor-1' 8747.872 1 ? ? 'residues 233-305' Homeodomain 5 water nat water 18.015 247 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 3 Hox-1.7 4 'Homeobox protein PBX1, Homeobox protein PRL' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DA)(DC)(DT)(DC)(DT)(DA)(DT)(DG)(DA)(DT)(DT)(DT)(DA)(DC)(DG)(DA)(DC)(DG)(DC)(DT)' ACTCTATGATTTACGACGCT D ? 2 polydeoxyribonucleotide no no '(DT)(DA)(DG)(DC)(DG)(DT)(DC)(DG)(DT)(DA)(DA)(DA)(DT)(DC)(DA)(DT)(DA)(DG)(DA)(DG)' TAGCGTCGTAAATCATAGAG E ? 3 'polypeptide(L)' no no NNPAANWLHARSTRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINKDRAK NNPAANWLHARSTRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINKDRAK A ? 4 'polypeptide(L)' no no ARRKRRNFNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQEEANIY ARRKRRNFNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQEEANIY B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DA n 1 2 DC n 1 3 DT n 1 4 DC n 1 5 DT n 1 6 DA n 1 7 DT n 1 8 DG n 1 9 DA n 1 10 DT n 1 11 DT n 1 12 DT n 1 13 DA n 1 14 DC n 1 15 DG n 1 16 DA n 1 17 DC n 1 18 DG n 1 19 DC n 1 20 DT n 2 1 DT n 2 2 DA n 2 3 DG n 2 4 DC n 2 5 DG n 2 6 DT n 2 7 DC n 2 8 DG n 2 9 DT n 2 10 DA n 2 11 DA n 2 12 DA n 2 13 DT n 2 14 DC n 2 15 DA n 2 16 DT n 2 17 DA n 2 18 DG n 2 19 DA n 2 20 DG n 3 1 ASN n 3 2 ASN n 3 3 PRO n 3 4 ALA n 3 5 ALA n 3 6 ASN n 3 7 TRP n 3 8 LEU n 3 9 HIS n 3 10 ALA n 3 11 ARG n 3 12 SER n 3 13 THR n 3 14 ARG n 3 15 LYS n 3 16 LYS n 3 17 ARG n 3 18 CYS n 3 19 PRO n 3 20 TYR n 3 21 THR n 3 22 LYS n 3 23 HIS n 3 24 GLN n 3 25 THR n 3 26 LEU n 3 27 GLU n 3 28 LEU n 3 29 GLU n 3 30 LYS n 3 31 GLU n 3 32 PHE n 3 33 LEU n 3 34 PHE n 3 35 ASN n 3 36 MET n 3 37 TYR n 3 38 LEU n 3 39 THR n 3 40 ARG n 3 41 ASP n 3 42 ARG n 3 43 ARG n 3 44 TYR n 3 45 GLU n 3 46 VAL n 3 47 ALA n 3 48 ARG n 3 49 LEU n 3 50 LEU n 3 51 ASN n 3 52 LEU n 3 53 THR n 3 54 GLU n 3 55 ARG n 3 56 GLN n 3 57 VAL n 3 58 LYS n 3 59 ILE n 3 60 TRP n 3 61 PHE n 3 62 GLN n 3 63 ASN n 3 64 ARG n 3 65 ARG n 3 66 MET n 3 67 LYS n 3 68 MET n 3 69 LYS n 3 70 LYS n 3 71 ILE n 3 72 ASN n 3 73 LYS n 3 74 ASP n 3 75 ARG n 3 76 ALA n 3 77 LYS n 4 1 ALA n 4 2 ARG n 4 3 ARG n 4 4 LYS n 4 5 ARG n 4 6 ARG n 4 7 ASN n 4 8 PHE n 4 9 ASN n 4 10 LYS n 4 11 GLN n 4 12 ALA n 4 13 THR n 4 14 GLU n 4 15 ILE n 4 16 LEU n 4 17 ASN n 4 18 GLU n 4 19 TYR n 4 20 PHE n 4 21 TYR n 4 22 SER n 4 23 HIS n 4 24 LEU n 4 25 SER n 4 26 ASN n 4 27 PRO n 4 28 TYR n 4 29 PRO n 4 30 SER n 4 31 GLU n 4 32 GLU n 4 33 ALA n 4 34 LYS n 4 35 GLU n 4 36 GLU n 4 37 LEU n 4 38 ALA n 4 39 LYS n 4 40 LYS n 4 41 CYS n 4 42 GLY n 4 43 ILE n 4 44 THR n 4 45 VAL n 4 46 SER n 4 47 GLN n 4 48 VAL n 4 49 SER n 4 50 ASN n 4 51 TRP n 4 52 PHE n 4 53 GLY n 4 54 ASN n 4 55 LYS n 4 56 ARG n 4 57 ILE n 4 58 ARG n 4 59 TYR n 4 60 LYS n 4 61 LYS n 4 62 ASN n 4 63 ILE n 4 64 GLY n 4 65 LYS n 4 66 PHE n 4 67 GLN n 4 68 GLU n 4 69 GLU n 4 70 ALA n 4 71 ASN n 4 72 ILE n 4 73 TYR n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 3 1 sample ? ? ? 'house mouse' Mus HOXA9 ? ? ? ? ? ? 'Mus musculus' 10090 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 Escherichia ? ? ? ? ? 'Bl21(DE3) Codon + -RIL' ? ? ? ? ? ? ? PLASMID ? ? ? pET28a+ ? ? 4 1 sample ? ? ? human Homo PBX1 ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli BL21(DE3)' 469008 Escherichia ? ? 'Escherichia coli' ? ? 'Bl21(DE3)' ? ? ? ? ? ? ? PLASMID ? ? ? pET11d ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP HXA9_MOUSE P09631 3 NNPAANWLHARSTRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINKDRAK 193 ? 2 UNP PBX1_HUMAN P40424 4 ARRKRRNFNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQEEANIY 233 ? 3 PDB 1PUF 1PUF 1 ? ? ? 4 PDB 1PUF 1PUF 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1PUF A 1 ? 77 ? P09631 193 ? 269 ? 193 269 2 2 1PUF B 1 ? 73 ? P40424 233 ? 305 ? 233 305 3 3 1PUF D 1 ? 20 ? 1PUF 1 ? 20 ? 1 20 4 4 1PUF E 1 ? 20 ? 1PUF 21 ? 40 ? 21 40 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1PUF _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.03 _exptl_crystal.density_percent_sol 59.45 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp 292 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.50 _exptl_crystal_grow.pdbx_details 'PEG 4000, hepes, cobaltic hexamine, dithiothrietol, EDTA, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 292K, pH 7.50' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'PEG 4000' ? ? ? 1 2 1 hepes ? ? ? 1 3 1 'cobaltic hexamine' ? ? ? 1 4 1 dithiothrietol ? ? ? 1 5 1 EDTA ? ? ? 1 6 1 H2O ? ? ? 1 7 2 'PEG 4000' ? ? ? 1 8 2 hepes ? ? ? 1 9 2 'cobaltic hexamine' ? ? ? 1 10 2 EDTA ? ? ? 1 11 2 dithiothrietol ? ? ? 1 12 2 H2O ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2000-09-27 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SI(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9116 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X4A' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X4A _diffrn_source.pdbx_wavelength 0.9116 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1PUF _reflns.observed_criterion_sigma_I 0.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 20.000 _reflns.d_resolution_high 1.900 _reflns.number_obs 28839 _reflns.number_all ? _reflns.percent_possible_obs 95.6 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.065 _reflns.pdbx_netI_over_sigmaI 22.3000 _reflns.B_iso_Wilson_estimate 31.6 _reflns.pdbx_redundancy 4.300 _reflns.R_free_details ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.90 _reflns_shell.d_res_low 20.00 _reflns_shell.percent_possible_all 94.1 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.26 _reflns_shell.meanI_over_sigI_obs 4.900 _reflns_shell.pdbx_redundancy 3.80 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1PUF _refine.ls_number_reflns_obs 28839 _refine.ls_number_reflns_all 30169 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF 1537852.39 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF 1537852.39 _refine.ls_d_res_low 19.97 _refine.ls_d_res_high 1.90 _refine.ls_percent_reflns_obs 95.6 _refine.ls_R_factor_obs 0.233 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.233 _refine.ls_R_factor_R_free 0.268 _refine.ls_R_factor_R_free_error 0.005 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.0 _refine.ls_number_reflns_R_free 2873 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 48.7 _refine.aniso_B[1][1] -2.44 _refine.aniso_B[2][2] -8.53 _refine.aniso_B[3][3] 10.98 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 1B72' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'ENGH & HUBER' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details 'RANDOM IN CNS' _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1PUF _refine_analyze.Luzzati_coordinate_error_obs 0.29 _refine_analyze.Luzzati_sigma_a_obs 0.26 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.35 _refine_analyze.Luzzati_sigma_a_free 0.28 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1268 _refine_hist.pdbx_number_atoms_nucleic_acid 814 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 247 _refine_hist.number_atoms_total 2329 _refine_hist.d_res_high 1.90 _refine_hist.d_res_low 19.97 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.010 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.43 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 18.5 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 1.37 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.54 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.48 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 1.97 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 2.98 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 1.90 _refine_ls_shell.d_res_low 2.02 _refine_ls_shell.number_reflns_R_work 4155 _refine_ls_shell.R_factor_R_work 0.322 _refine_ls_shell.percent_reflns_obs 93.5 _refine_ls_shell.R_factor_R_free 0.355 _refine_ls_shell.R_factor_R_free_error 0.017 _refine_ls_shell.percent_reflns_R_free 9.9 _refine_ls_shell.number_reflns_R_free 456 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 DNA-RNA_REP.PARAM DNA-RNA.TOP 'X-RAY DIFFRACTION' 3 WATER_REP.PARAM WATER.TOP 'X-RAY DIFFRACTION' 4 ION_REP.PARAM ION.TOP 'X-RAY DIFFRACTION' # _struct.entry_id 1PUF _struct.title 'Crystal Structure of HoxA9 and Pbx1 homeodomains bound to DNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1PUF _struct_keywords.pdbx_keywords Transcription/DNA _struct_keywords.text 'Homeodomian, Protein-DNA complex, Hox Hexapeptide, TALE homeodomain, Homeodomain interaction, Transcription-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? H N N 5 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR C 21 ? ASN C 35 ? THR A 213 ASN A 227 1 ? 15 HELX_P HELX_P2 2 THR C 39 ? ASN C 51 ? THR A 231 ASN A 243 1 ? 13 HELX_P HELX_P3 3 THR C 53 ? ALA C 76 ? THR A 245 ALA A 268 1 ? 24 HELX_P HELX_P4 4 ASN D 9 ? HIS D 23 ? ASN B 241 HIS B 255 1 ? 15 HELX_P HELX_P5 5 SER D 30 ? GLY D 42 ? SER B 262 GLY B 274 1 ? 13 HELX_P HELX_P6 6 THR D 44 ? ASN D 62 ? THR B 276 ASN B 294 1 ? 19 HELX_P HELX_P7 7 GLU D 68 ? TYR D 73 ? GLU B 300 TYR B 305 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DC 2 N3 ? ? ? 1_555 B DG 20 N1 ? ? D DC 2 E DG 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 2 N4 ? ? ? 1_555 B DG 20 O6 ? ? D DC 2 E DG 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 2 O2 ? ? ? 1_555 B DG 20 N2 ? ? D DC 2 E DG 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DT 3 N3 ? ? ? 1_555 B DA 19 N1 ? ? D DT 3 E DA 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DT 3 O4 ? ? ? 1_555 B DA 19 N6 ? ? D DT 3 E DA 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 4 N3 ? ? ? 1_555 B DG 18 N1 ? ? D DC 4 E DG 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DC 4 N4 ? ? ? 1_555 B DG 18 O6 ? ? D DC 4 E DG 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 4 O2 ? ? ? 1_555 B DG 18 N2 ? ? D DC 4 E DG 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DT 5 N3 ? ? ? 1_555 B DA 17 N1 ? ? D DT 5 E DA 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DT 5 O4 ? ? ? 1_555 B DA 17 N6 ? ? D DT 5 E DA 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DA 6 N1 ? ? ? 1_555 B DT 16 N3 ? ? D DA 6 E DT 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DA 6 N6 ? ? ? 1_555 B DT 16 O4 ? ? D DA 6 E DT 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DT 7 N3 ? ? ? 1_555 B DA 15 N1 ? ? D DT 7 E DA 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DT 7 O4 ? ? ? 1_555 B DA 15 N6 ? ? D DT 7 E DA 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DG 8 N1 ? ? ? 1_555 B DC 14 N3 ? ? D DG 8 E DC 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DG 8 N2 ? ? ? 1_555 B DC 14 O2 ? ? D DG 8 E DC 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DG 8 O6 ? ? ? 1_555 B DC 14 N4 ? ? D DG 8 E DC 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DA 9 N1 ? ? ? 1_555 B DT 13 N3 ? ? D DA 9 E DT 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DA 9 N6 ? ? ? 1_555 B DT 13 O4 ? ? D DA 9 E DT 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DT 10 N3 ? ? ? 1_555 B DA 12 N1 ? ? D DT 10 E DA 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DT 10 O4 ? ? ? 1_555 B DA 12 N6 ? ? D DT 10 E DA 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DT 11 N3 ? ? ? 1_555 B DA 11 N1 ? ? D DT 11 E DA 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DT 11 O4 ? ? ? 1_555 B DA 11 N6 ? ? D DT 11 E DA 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DT 12 N3 ? ? ? 1_555 B DA 10 N1 ? ? D DT 12 E DA 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DT 12 O4 ? ? ? 1_555 B DA 10 N6 ? ? D DT 12 E DA 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DA 13 N1 ? ? ? 1_555 B DT 9 N3 ? ? D DA 13 E DT 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DA 13 N6 ? ? ? 1_555 B DT 9 O4 ? ? D DA 13 E DT 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DC 14 N3 ? ? ? 1_555 B DG 8 N1 ? ? D DC 14 E DG 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DC 14 N4 ? ? ? 1_555 B DG 8 O6 ? ? D DC 14 E DG 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DC 14 O2 ? ? ? 1_555 B DG 8 N2 ? ? D DC 14 E DG 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DG 15 N1 ? ? ? 1_555 B DC 7 N3 ? ? D DG 15 E DC 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DG 15 N2 ? ? ? 1_555 B DC 7 O2 ? ? D DG 15 E DC 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DG 15 O6 ? ? ? 1_555 B DC 7 N4 ? ? D DG 15 E DC 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DA 16 N1 ? ? ? 1_555 B DT 6 N3 ? ? D DA 16 E DT 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A DA 16 N6 ? ? ? 1_555 B DT 6 O4 ? ? D DA 16 E DT 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DC 17 N3 ? ? ? 1_555 B DG 5 N1 ? ? D DC 17 E DG 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A DC 17 N4 ? ? ? 1_555 B DG 5 O6 ? ? D DC 17 E DG 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A DC 17 O2 ? ? ? 1_555 B DG 5 N2 ? ? D DC 17 E DG 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A DG 18 N1 ? ? ? 1_555 B DC 4 N3 ? ? D DG 18 E DC 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A DG 18 N2 ? ? ? 1_555 B DC 4 O2 ? ? D DG 18 E DC 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A DG 18 O6 ? ? ? 1_555 B DC 4 N4 ? ? D DG 18 E DC 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A DC 19 N3 ? ? ? 1_555 B DG 3 N1 ? ? D DC 19 E DG 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A DC 19 N4 ? ? ? 1_555 B DG 3 O6 ? ? D DC 19 E DG 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A DC 19 O2 ? ? ? 1_555 B DG 3 N2 ? ? D DC 19 E DG 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A DT 20 N3 ? ? ? 1_555 B DA 2 N1 ? ? D DT 20 E DA 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A DT 20 O4 ? ? ? 1_555 B DA 2 N6 ? ? D DT 20 E DA 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _database_PDB_matrix.entry_id 1PUF _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1PUF _atom_sites.fract_transf_matrix[1][1] 0.016456 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008707 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009245 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DA 1 1 1 DA ADE D . n A 1 2 DC 2 2 2 DC CYT D . n A 1 3 DT 3 3 3 DT THY D . n A 1 4 DC 4 4 4 DC CYT D . n A 1 5 DT 5 5 5 DT THY D . n A 1 6 DA 6 6 6 DA ADE D . n A 1 7 DT 7 7 7 DT THY D . n A 1 8 DG 8 8 8 DG GUA D . n A 1 9 DA 9 9 9 DA ADE D . n A 1 10 DT 10 10 10 DT THY D . n A 1 11 DT 11 11 11 DT THY D . n A 1 12 DT 12 12 12 DT THY D . n A 1 13 DA 13 13 13 DA ADE D . n A 1 14 DC 14 14 14 DC CYT D . n A 1 15 DG 15 15 15 DG GUA D . n A 1 16 DA 16 16 16 DA ADE D . n A 1 17 DC 17 17 17 DC CYT D . n A 1 18 DG 18 18 18 DG GUA D . n A 1 19 DC 19 19 19 DC CYT D . n A 1 20 DT 20 20 20 DT THY D . n B 2 1 DT 1 21 21 DT THY E . n B 2 2 DA 2 22 22 DA ADE E . n B 2 3 DG 3 23 23 DG GUA E . n B 2 4 DC 4 24 24 DC CYT E . n B 2 5 DG 5 25 25 DG GUA E . n B 2 6 DT 6 26 26 DT THY E . n B 2 7 DC 7 27 27 DC CYT E . n B 2 8 DG 8 28 28 DG GUA E . n B 2 9 DT 9 29 29 DT THY E . n B 2 10 DA 10 30 30 DA ADE E . n B 2 11 DA 11 31 31 DA ADE E . n B 2 12 DA 12 32 32 DA ADE E . n B 2 13 DT 13 33 33 DT THY E . n B 2 14 DC 14 34 34 DC CYT E . n B 2 15 DA 15 35 35 DA ADE E . n B 2 16 DT 16 36 36 DT THY E . n B 2 17 DA 17 37 37 DA ADE E . n B 2 18 DG 18 38 38 DG GUA E . n B 2 19 DA 19 39 39 DA ADE E . n B 2 20 DG 20 40 40 DG GUA E . n C 3 1 ASN 1 193 193 ASN ASN A . n C 3 2 ASN 2 194 194 ASN ASN A . n C 3 3 PRO 3 195 195 PRO PRO A . n C 3 4 ALA 4 196 196 ALA ALA A . n C 3 5 ALA 5 197 197 ALA ALA A . n C 3 6 ASN 6 198 198 ASN ASN A . n C 3 7 TRP 7 199 199 TRP TRP A . n C 3 8 LEU 8 200 200 LEU LEU A . n C 3 9 HIS 9 201 201 HIS HIS A . n C 3 10 ALA 10 202 202 ALA ALA A . n C 3 11 ARG 11 203 203 ARG ARG A . n C 3 12 SER 12 204 204 SER SER A . n C 3 13 THR 13 205 205 THR THR A . n C 3 14 ARG 14 206 206 ARG ARG A . n C 3 15 LYS 15 207 207 LYS LYS A . n C 3 16 LYS 16 208 208 LYS LYS A . n C 3 17 ARG 17 209 209 ARG ARG A . n C 3 18 CYS 18 210 210 CYS CYS A . n C 3 19 PRO 19 211 211 PRO PRO A . n C 3 20 TYR 20 212 212 TYR TYR A . n C 3 21 THR 21 213 213 THR THR A . n C 3 22 LYS 22 214 214 LYS LYS A . n C 3 23 HIS 23 215 215 HIS HIS A . n C 3 24 GLN 24 216 216 GLN GLN A . n C 3 25 THR 25 217 217 THR THR A . n C 3 26 LEU 26 218 218 LEU LEU A . n C 3 27 GLU 27 219 219 GLU GLU A . n C 3 28 LEU 28 220 220 LEU LEU A . n C 3 29 GLU 29 221 221 GLU GLU A . n C 3 30 LYS 30 222 222 LYS LYS A . n C 3 31 GLU 31 223 223 GLU GLU A . n C 3 32 PHE 32 224 224 PHE PHE A . n C 3 33 LEU 33 225 225 LEU LEU A . n C 3 34 PHE 34 226 226 PHE PHE A . n C 3 35 ASN 35 227 227 ASN ALA A . n C 3 36 MET 36 228 228 MET MET A . n C 3 37 TYR 37 229 229 TYR TYR A . n C 3 38 LEU 38 230 230 LEU LEU A . n C 3 39 THR 39 231 231 THR THR A . n C 3 40 ARG 40 232 232 ARG ARG A . n C 3 41 ASP 41 233 233 ASP ASP A . n C 3 42 ARG 42 234 234 ARG ARG A . n C 3 43 ARG 43 235 235 ARG ARG A . n C 3 44 TYR 44 236 236 TYR ALA A . n C 3 45 GLU 45 237 237 GLU ALA A . n C 3 46 VAL 46 238 238 VAL VAL A . n C 3 47 ALA 47 239 239 ALA ALA A . n C 3 48 ARG 48 240 240 ARG ALA A . n C 3 49 LEU 49 241 241 LEU LEU A . n C 3 50 LEU 50 242 242 LEU LEU A . n C 3 51 ASN 51 243 243 ASN ASN A . n C 3 52 LEU 52 244 244 LEU LEU A . n C 3 53 THR 53 245 245 THR THR A . n C 3 54 GLU 54 246 246 GLU GLU A . n C 3 55 ARG 55 247 247 ARG ARG A . n C 3 56 GLN 56 248 248 GLN GLN A . n C 3 57 VAL 57 249 249 VAL VAL A . n C 3 58 LYS 58 250 250 LYS LYS A . n C 3 59 ILE 59 251 251 ILE ILE A . n C 3 60 TRP 60 252 252 TRP TRP A . n C 3 61 PHE 61 253 253 PHE PHE A . n C 3 62 GLN 62 254 254 GLN GLN A . n C 3 63 ASN 63 255 255 ASN ASN A . n C 3 64 ARG 64 256 256 ARG ARG A . n C 3 65 ARG 65 257 257 ARG ARG A . n C 3 66 MET 66 258 258 MET MET A . n C 3 67 LYS 67 259 259 LYS LYS A . n C 3 68 MET 68 260 260 MET MET A . n C 3 69 LYS 69 261 261 LYS LYS A . n C 3 70 LYS 70 262 262 LYS LYS A . n C 3 71 ILE 71 263 263 ILE ILE A . n C 3 72 ASN 72 264 264 ASN ASN A . n C 3 73 LYS 73 265 265 LYS ALA A . n C 3 74 ASP 74 266 266 ASP ALA A . n C 3 75 ARG 75 267 267 ARG ARG A . n C 3 76 ALA 76 268 268 ALA ALA A . n C 3 77 LYS 77 269 269 LYS ALA A . n D 4 1 ALA 1 233 233 ALA ALA B . n D 4 2 ARG 2 234 234 ARG ARG B . n D 4 3 ARG 3 235 235 ARG ARG B . n D 4 4 LYS 4 236 236 LYS LYS B . n D 4 5 ARG 5 237 237 ARG ARG B . n D 4 6 ARG 6 238 238 ARG ARG B . n D 4 7 ASN 7 239 239 ASN ASN B . n D 4 8 PHE 8 240 240 PHE PHE B . n D 4 9 ASN 9 241 241 ASN ASN B . n D 4 10 LYS 10 242 242 LYS LYS B . n D 4 11 GLN 11 243 243 GLN GLN B . n D 4 12 ALA 12 244 244 ALA ALA B . n D 4 13 THR 13 245 245 THR THR B . n D 4 14 GLU 14 246 246 GLU ALA B . n D 4 15 ILE 15 247 247 ILE ILE B . n D 4 16 LEU 16 248 248 LEU LEU B . n D 4 17 ASN 17 249 249 ASN ASN B . n D 4 18 GLU 18 250 250 GLU ALA B . n D 4 19 TYR 19 251 251 TYR TYR B . n D 4 20 PHE 20 252 252 PHE PHE B . n D 4 21 TYR 21 253 253 TYR TYR B . n D 4 22 SER 22 254 254 SER SER B . n D 4 23 HIS 23 255 255 HIS HIS B . n D 4 24 LEU 24 256 256 LEU LEU B . n D 4 25 SER 25 257 257 SER SER B . n D 4 26 ASN 26 258 258 ASN ASN B . n D 4 27 PRO 27 259 259 PRO PRO B . n D 4 28 TYR 28 260 260 TYR TYR B . n D 4 29 PRO 29 261 261 PRO PRO B . n D 4 30 SER 30 262 262 SER SER B . n D 4 31 GLU 31 263 263 GLU ALA B . n D 4 32 GLU 32 264 264 GLU GLU B . n D 4 33 ALA 33 265 265 ALA ALA B . n D 4 34 LYS 34 266 266 LYS LYS B . n D 4 35 GLU 35 267 267 GLU GLU B . n D 4 36 GLU 36 268 268 GLU GLU B . n D 4 37 LEU 37 269 269 LEU LEU B . n D 4 38 ALA 38 270 270 ALA ALA B . n D 4 39 LYS 39 271 271 LYS LYS B . n D 4 40 LYS 40 272 272 LYS LYS B . n D 4 41 CYS 41 273 273 CYS CYS B . n D 4 42 GLY 42 274 274 GLY GLY B . n D 4 43 ILE 43 275 275 ILE ILE B . n D 4 44 THR 44 276 276 THR THR B . n D 4 45 VAL 45 277 277 VAL VAL B . n D 4 46 SER 46 278 278 SER SER B . n D 4 47 GLN 47 279 279 GLN GLN B . n D 4 48 VAL 48 280 280 VAL VAL B . n D 4 49 SER 49 281 281 SER SER B . n D 4 50 ASN 50 282 282 ASN ASN B . n D 4 51 TRP 51 283 283 TRP TRP B . n D 4 52 PHE 52 284 284 PHE PHE B . n D 4 53 GLY 53 285 285 GLY GLY B . n D 4 54 ASN 54 286 286 ASN ASN B . n D 4 55 LYS 55 287 287 LYS LYS B . n D 4 56 ARG 56 288 288 ARG ARG B . n D 4 57 ILE 57 289 289 ILE ILE B . n D 4 58 ARG 58 290 290 ARG ARG B . n D 4 59 TYR 59 291 291 TYR TYR B . n D 4 60 LYS 60 292 292 LYS LYS B . n D 4 61 LYS 61 293 293 LYS LYS B . n D 4 62 ASN 62 294 294 ASN ASN B . n D 4 63 ILE 63 295 295 ILE ILE B . n D 4 64 GLY 64 296 296 GLY GLY B . n D 4 65 LYS 65 297 297 LYS ALA B . n D 4 66 PHE 66 298 298 PHE PHE B . n D 4 67 GLN 67 299 299 GLN GLN B . n D 4 68 GLU 68 300 300 GLU GLY B . n D 4 69 GLU 69 301 301 GLU GLU B . n D 4 70 ALA 70 302 302 ALA ALA B . n D 4 71 ASN 71 303 303 ASN ASN B . n D 4 72 ILE 72 304 304 ILE ILE B . n D 4 73 TYR 73 305 305 TYR TYR B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 HOH 1 21 11 HOH HOH D . E 5 HOH 2 22 12 HOH HOH D . E 5 HOH 3 23 15 HOH HOH D . E 5 HOH 4 24 18 HOH HOH D . E 5 HOH 5 25 21 HOH HOH D . E 5 HOH 6 26 24 HOH HOH D . E 5 HOH 7 27 26 HOH HOH D . E 5 HOH 8 28 28 HOH HOH D . E 5 HOH 9 29 34 HOH HOH D . E 5 HOH 10 30 37 HOH HOH D . E 5 HOH 11 31 46 HOH HOH D . E 5 HOH 12 32 47 HOH HOH D . E 5 HOH 13 33 53 HOH HOH D . E 5 HOH 14 34 58 HOH HOH D . E 5 HOH 15 35 59 HOH HOH D . E 5 HOH 16 36 60 HOH HOH D . E 5 HOH 17 37 65 HOH HOH D . E 5 HOH 18 38 69 HOH HOH D . E 5 HOH 19 39 70 HOH HOH D . E 5 HOH 20 40 75 HOH HOH D . E 5 HOH 21 41 76 HOH HOH D . E 5 HOH 22 42 99 HOH HOH D . E 5 HOH 23 43 105 HOH HOH D . E 5 HOH 24 44 112 HOH HOH D . E 5 HOH 25 45 116 HOH HOH D . E 5 HOH 26 46 120 HOH HOH D . E 5 HOH 27 47 121 HOH HOH D . E 5 HOH 28 48 126 HOH HOH D . E 5 HOH 29 49 137 HOH HOH D . E 5 HOH 30 50 143 HOH HOH D . E 5 HOH 31 51 182 HOH HOH D . E 5 HOH 32 52 188 HOH HOH D . E 5 HOH 33 53 189 HOH HOH D . E 5 HOH 34 54 205 HOH HOH D . E 5 HOH 35 55 219 HOH HOH D . E 5 HOH 36 56 221 HOH HOH D . E 5 HOH 37 57 227 HOH HOH D . E 5 HOH 38 58 229 HOH HOH D . E 5 HOH 39 59 230 HOH HOH D . E 5 HOH 40 60 233 HOH HOH D . E 5 HOH 41 61 241 HOH HOH D . E 5 HOH 42 62 242 HOH HOH D . E 5 HOH 43 63 243 HOH HOH D . F 5 HOH 1 41 2 HOH HOH E . F 5 HOH 2 42 3 HOH HOH E . F 5 HOH 3 43 5 HOH HOH E . F 5 HOH 4 44 6 HOH HOH E . F 5 HOH 5 45 7 HOH HOH E . F 5 HOH 6 46 8 HOH HOH E . F 5 HOH 7 47 13 HOH HOH E . F 5 HOH 8 48 16 HOH HOH E . F 5 HOH 9 49 20 HOH HOH E . F 5 HOH 10 50 22 HOH HOH E . F 5 HOH 11 51 23 HOH HOH E . F 5 HOH 12 52 29 HOH HOH E . F 5 HOH 13 53 30 HOH HOH E . F 5 HOH 14 54 33 HOH HOH E . F 5 HOH 15 55 35 HOH HOH E . F 5 HOH 16 56 36 HOH HOH E . F 5 HOH 17 57 38 HOH HOH E . F 5 HOH 18 58 39 HOH HOH E . F 5 HOH 19 59 40 HOH HOH E . F 5 HOH 20 60 50 HOH HOH E . F 5 HOH 21 61 56 HOH HOH E . F 5 HOH 22 62 66 HOH HOH E . F 5 HOH 23 63 67 HOH HOH E . F 5 HOH 24 64 77 HOH HOH E . F 5 HOH 25 65 80 HOH HOH E . F 5 HOH 26 66 89 HOH HOH E . F 5 HOH 27 67 95 HOH HOH E . F 5 HOH 28 68 100 HOH HOH E . F 5 HOH 29 69 102 HOH HOH E . F 5 HOH 30 70 104 HOH HOH E . F 5 HOH 31 71 107 HOH HOH E . F 5 HOH 32 72 113 HOH HOH E . F 5 HOH 33 73 115 HOH HOH E . F 5 HOH 34 74 118 HOH HOH E . F 5 HOH 35 75 122 HOH HOH E . F 5 HOH 36 76 125 HOH HOH E . F 5 HOH 37 77 136 HOH HOH E . F 5 HOH 38 78 141 HOH HOH E . F 5 HOH 39 79 148 HOH HOH E . F 5 HOH 40 80 150 HOH HOH E . F 5 HOH 41 81 155 HOH HOH E . F 5 HOH 42 82 161 HOH HOH E . F 5 HOH 43 83 163 HOH HOH E . F 5 HOH 44 84 168 HOH HOH E . F 5 HOH 45 85 174 HOH HOH E . F 5 HOH 46 86 177 HOH HOH E . F 5 HOH 47 87 178 HOH HOH E . F 5 HOH 48 88 180 HOH HOH E . F 5 HOH 49 89 185 HOH HOH E . F 5 HOH 50 90 191 HOH HOH E . F 5 HOH 51 91 193 HOH HOH E . F 5 HOH 52 92 196 HOH HOH E . F 5 HOH 53 93 200 HOH HOH E . F 5 HOH 54 94 208 HOH HOH E . F 5 HOH 55 95 213 HOH HOH E . F 5 HOH 56 96 218 HOH HOH E . F 5 HOH 57 97 224 HOH HOH E . F 5 HOH 58 98 225 HOH HOH E . F 5 HOH 59 99 245 HOH HOH E . F 5 HOH 60 100 247 HOH HOH E . G 5 HOH 1 270 1 HOH HOH A . G 5 HOH 2 271 9 HOH HOH A . G 5 HOH 3 272 10 HOH HOH A . G 5 HOH 4 273 14 HOH HOH A . G 5 HOH 5 274 19 HOH HOH A . G 5 HOH 6 275 25 HOH HOH A . G 5 HOH 7 276 31 HOH HOH A . G 5 HOH 8 277 42 HOH HOH A . G 5 HOH 9 278 43 HOH HOH A . G 5 HOH 10 279 44 HOH HOH A . G 5 HOH 11 280 61 HOH HOH A . G 5 HOH 12 281 63 HOH HOH A . G 5 HOH 13 282 64 HOH HOH A . G 5 HOH 14 283 71 HOH HOH A . G 5 HOH 15 284 72 HOH HOH A . G 5 HOH 16 285 73 HOH HOH A . G 5 HOH 17 286 74 HOH HOH A . G 5 HOH 18 287 79 HOH HOH A . G 5 HOH 19 288 86 HOH HOH A . G 5 HOH 20 289 87 HOH HOH A . G 5 HOH 21 290 90 HOH HOH A . G 5 HOH 22 291 93 HOH HOH A . G 5 HOH 23 292 94 HOH HOH A . G 5 HOH 24 293 98 HOH HOH A . G 5 HOH 25 294 101 HOH HOH A . G 5 HOH 26 295 108 HOH HOH A . G 5 HOH 27 296 109 HOH HOH A . G 5 HOH 28 297 110 HOH HOH A . G 5 HOH 29 298 123 HOH HOH A . G 5 HOH 30 299 124 HOH HOH A . G 5 HOH 31 300 127 HOH HOH A . G 5 HOH 32 301 130 HOH HOH A . G 5 HOH 33 302 131 HOH HOH A . G 5 HOH 34 303 132 HOH HOH A . G 5 HOH 35 304 135 HOH HOH A . G 5 HOH 36 305 138 HOH HOH A . G 5 HOH 37 306 139 HOH HOH A . G 5 HOH 38 307 140 HOH HOH A . G 5 HOH 39 308 142 HOH HOH A . G 5 HOH 40 309 145 HOH HOH A . G 5 HOH 41 310 151 HOH HOH A . G 5 HOH 42 311 154 HOH HOH A . G 5 HOH 43 312 156 HOH HOH A . G 5 HOH 44 313 157 HOH HOH A . G 5 HOH 45 314 158 HOH HOH A . G 5 HOH 46 315 159 HOH HOH A . G 5 HOH 47 316 162 HOH HOH A . G 5 HOH 48 317 169 HOH HOH A . G 5 HOH 49 318 170 HOH HOH A . G 5 HOH 50 319 172 HOH HOH A . G 5 HOH 51 320 173 HOH HOH A . G 5 HOH 52 321 179 HOH HOH A . G 5 HOH 53 322 181 HOH HOH A . G 5 HOH 54 323 183 HOH HOH A . G 5 HOH 55 324 184 HOH HOH A . G 5 HOH 56 325 186 HOH HOH A . G 5 HOH 57 326 187 HOH HOH A . G 5 HOH 58 327 190 HOH HOH A . G 5 HOH 59 328 195 HOH HOH A . G 5 HOH 60 329 202 HOH HOH A . G 5 HOH 61 330 204 HOH HOH A . G 5 HOH 62 331 207 HOH HOH A . G 5 HOH 63 332 209 HOH HOH A . G 5 HOH 64 333 214 HOH HOH A . G 5 HOH 65 334 215 HOH HOH A . G 5 HOH 66 335 217 HOH HOH A . G 5 HOH 67 336 222 HOH HOH A . G 5 HOH 68 337 223 HOH HOH A . G 5 HOH 69 338 231 HOH HOH A . G 5 HOH 70 339 235 HOH HOH A . G 5 HOH 71 340 236 HOH HOH A . G 5 HOH 72 341 237 HOH HOH A . G 5 HOH 73 342 239 HOH HOH A . G 5 HOH 74 343 240 HOH HOH A . G 5 HOH 75 344 244 HOH HOH A . G 5 HOH 76 345 246 HOH HOH A . H 5 HOH 1 306 4 HOH HOH B . H 5 HOH 2 307 17 HOH HOH B . H 5 HOH 3 308 27 HOH HOH B . H 5 HOH 4 309 32 HOH HOH B . H 5 HOH 5 310 41 HOH HOH B . H 5 HOH 6 311 45 HOH HOH B . H 5 HOH 7 312 48 HOH HOH B . H 5 HOH 8 313 49 HOH HOH B . H 5 HOH 9 314 51 HOH HOH B . H 5 HOH 10 315 52 HOH HOH B . H 5 HOH 11 316 54 HOH HOH B . H 5 HOH 12 317 55 HOH HOH B . H 5 HOH 13 318 57 HOH HOH B . H 5 HOH 14 319 62 HOH HOH B . H 5 HOH 15 320 68 HOH HOH B . H 5 HOH 16 321 78 HOH HOH B . H 5 HOH 17 322 81 HOH HOH B . H 5 HOH 18 323 82 HOH HOH B . H 5 HOH 19 324 83 HOH HOH B . H 5 HOH 20 325 84 HOH HOH B . H 5 HOH 21 326 85 HOH HOH B . H 5 HOH 22 327 88 HOH HOH B . H 5 HOH 23 328 91 HOH HOH B . H 5 HOH 24 329 92 HOH HOH B . H 5 HOH 25 330 96 HOH HOH B . H 5 HOH 26 331 97 HOH HOH B . H 5 HOH 27 332 103 HOH HOH B . H 5 HOH 28 333 106 HOH HOH B . H 5 HOH 29 334 111 HOH HOH B . H 5 HOH 30 335 114 HOH HOH B . H 5 HOH 31 336 117 HOH HOH B . H 5 HOH 32 337 119 HOH HOH B . H 5 HOH 33 338 128 HOH HOH B . H 5 HOH 34 339 129 HOH HOH B . H 5 HOH 35 340 133 HOH HOH B . H 5 HOH 36 341 134 HOH HOH B . H 5 HOH 37 342 144 HOH HOH B . H 5 HOH 38 343 146 HOH HOH B . H 5 HOH 39 344 147 HOH HOH B . H 5 HOH 40 345 149 HOH HOH B . H 5 HOH 41 346 152 HOH HOH B . H 5 HOH 42 347 153 HOH HOH B . H 5 HOH 43 348 160 HOH HOH B . H 5 HOH 44 349 164 HOH HOH B . H 5 HOH 45 350 165 HOH HOH B . H 5 HOH 46 351 166 HOH HOH B . H 5 HOH 47 352 167 HOH HOH B . H 5 HOH 48 353 171 HOH HOH B . H 5 HOH 49 354 175 HOH HOH B . H 5 HOH 50 355 176 HOH HOH B . H 5 HOH 51 356 192 HOH HOH B . H 5 HOH 52 357 194 HOH HOH B . H 5 HOH 53 358 197 HOH HOH B . H 5 HOH 54 359 198 HOH HOH B . H 5 HOH 55 360 199 HOH HOH B . H 5 HOH 56 361 201 HOH HOH B . H 5 HOH 57 362 203 HOH HOH B . H 5 HOH 58 363 206 HOH HOH B . H 5 HOH 59 364 210 HOH HOH B . H 5 HOH 60 365 211 HOH HOH B . H 5 HOH 61 366 212 HOH HOH B . H 5 HOH 62 367 216 HOH HOH B . H 5 HOH 63 368 220 HOH HOH B . H 5 HOH 64 369 226 HOH HOH B . H 5 HOH 65 370 228 HOH HOH B . H 5 HOH 66 371 232 HOH HOH B . H 5 HOH 67 372 234 HOH HOH B . H 5 HOH 68 373 238 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2003-09-02 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-08-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 AMoRE phasing . ? 3 CNS refinement 1.0 ? 4 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OE1 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 GLU _pdbx_validate_close_contact.auth_seq_id_1 221 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 320 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.19 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 317 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 317 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 3_555 _pdbx_validate_symm_contact.dist 2.14 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O3'" D DT 11 ? ? P D DT 12 ? ? OP2 D DT 12 ? ? 119.11 110.50 8.61 1.10 Y 2 1 "O3'" D DA 13 ? ? P D DC 14 ? ? OP2 D DC 14 ? ? 118.14 110.50 7.64 1.10 Y 3 1 "O4'" D DC 17 ? ? "C1'" D DC 17 ? ? N1 D DC 17 ? ? 110.35 108.30 2.05 0.30 N 4 1 "C5'" E DA 37 ? ? "C4'" E DA 37 ? ? "C3'" E DA 37 ? ? 101.10 114.10 -13.00 1.80 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 204 ? ? -52.48 -2.23 2 1 ASN B 258 ? ? -172.29 73.44 3 1 GLU B 300 ? ? 85.10 -44.50 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DT D 11 ? ? 0.076 'SIDE CHAIN' 2 1 DC D 17 ? ? 0.103 'SIDE CHAIN' 3 1 DC E 24 ? ? 0.083 'SIDE CHAIN' 4 1 DA E 37 ? ? 0.093 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASN 227 ? CG ? C ASN 35 CG 2 1 Y 1 A ASN 227 ? OD1 ? C ASN 35 OD1 3 1 Y 1 A ASN 227 ? ND2 ? C ASN 35 ND2 4 1 Y 1 A TYR 236 ? CG ? C TYR 44 CG 5 1 Y 1 A TYR 236 ? CD1 ? C TYR 44 CD1 6 1 Y 1 A TYR 236 ? CD2 ? C TYR 44 CD2 7 1 Y 1 A TYR 236 ? CE1 ? C TYR 44 CE1 8 1 Y 1 A TYR 236 ? CE2 ? C TYR 44 CE2 9 1 Y 1 A TYR 236 ? CZ ? C TYR 44 CZ 10 1 Y 1 A TYR 236 ? OH ? C TYR 44 OH 11 1 Y 1 A GLU 237 ? CG ? C GLU 45 CG 12 1 Y 1 A GLU 237 ? CD ? C GLU 45 CD 13 1 Y 1 A GLU 237 ? OE1 ? C GLU 45 OE1 14 1 Y 1 A GLU 237 ? OE2 ? C GLU 45 OE2 15 1 Y 1 A ARG 240 ? CG ? C ARG 48 CG 16 1 Y 1 A ARG 240 ? CD ? C ARG 48 CD 17 1 Y 1 A ARG 240 ? NE ? C ARG 48 NE 18 1 Y 1 A ARG 240 ? CZ ? C ARG 48 CZ 19 1 Y 1 A ARG 240 ? NH1 ? C ARG 48 NH1 20 1 Y 1 A ARG 240 ? NH2 ? C ARG 48 NH2 21 1 Y 1 A LYS 265 ? CG ? C LYS 73 CG 22 1 Y 1 A LYS 265 ? CD ? C LYS 73 CD 23 1 Y 1 A LYS 265 ? CE ? C LYS 73 CE 24 1 Y 1 A LYS 265 ? NZ ? C LYS 73 NZ 25 1 Y 1 A ASP 266 ? CG ? C ASP 74 CG 26 1 Y 1 A ASP 266 ? OD1 ? C ASP 74 OD1 27 1 Y 1 A ASP 266 ? OD2 ? C ASP 74 OD2 28 1 Y 1 A LYS 269 ? CG ? C LYS 77 CG 29 1 Y 1 A LYS 269 ? CD ? C LYS 77 CD 30 1 Y 1 A LYS 269 ? CE ? C LYS 77 CE 31 1 Y 1 A LYS 269 ? NZ ? C LYS 77 NZ 32 1 Y 1 B GLU 246 ? CG ? D GLU 14 CG 33 1 Y 1 B GLU 246 ? CD ? D GLU 14 CD 34 1 Y 1 B GLU 246 ? OE1 ? D GLU 14 OE1 35 1 Y 1 B GLU 246 ? OE2 ? D GLU 14 OE2 36 1 Y 1 B GLU 250 ? CG ? D GLU 18 CG 37 1 Y 1 B GLU 250 ? CD ? D GLU 18 CD 38 1 Y 1 B GLU 250 ? OE1 ? D GLU 18 OE1 39 1 Y 1 B GLU 250 ? OE2 ? D GLU 18 OE2 40 1 Y 1 B GLU 263 ? CG ? D GLU 31 CG 41 1 Y 1 B GLU 263 ? CD ? D GLU 31 CD 42 1 Y 1 B GLU 263 ? OE1 ? D GLU 31 OE1 43 1 Y 1 B GLU 263 ? OE2 ? D GLU 31 OE2 44 1 Y 1 B LYS 297 ? CG ? D LYS 65 CG 45 1 Y 1 B LYS 297 ? CD ? D LYS 65 CD 46 1 Y 1 B LYS 297 ? CE ? D LYS 65 CE 47 1 Y 1 B LYS 297 ? NZ ? D LYS 65 NZ 48 1 Y 1 B GLU 300 ? CB ? D GLU 68 CB 49 1 Y 1 B GLU 300 ? CG ? D GLU 68 CG 50 1 Y 1 B GLU 300 ? CD ? D GLU 68 CD 51 1 Y 1 B GLU 300 ? OE1 ? D GLU 68 OE1 52 1 Y 1 B GLU 300 ? OE2 ? D GLU 68 OE2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HIS N N N N 280 HIS CA C N S 281 HIS C C N N 282 HIS O O N N 283 HIS CB C N N 284 HIS CG C Y N 285 HIS ND1 N Y N 286 HIS CD2 C Y N 287 HIS CE1 C Y N 288 HIS NE2 N Y N 289 HIS OXT O N N 290 HIS H H N N 291 HIS H2 H N N 292 HIS HA H N N 293 HIS HB2 H N N 294 HIS HB3 H N N 295 HIS HD1 H N N 296 HIS HD2 H N N 297 HIS HE1 H N N 298 HIS HE2 H N N 299 HIS HXT H N N 300 HOH O O N N 301 HOH H1 H N N 302 HOH H2 H N N 303 ILE N N N N 304 ILE CA C N S 305 ILE C C N N 306 ILE O O N N 307 ILE CB C N S 308 ILE CG1 C N N 309 ILE CG2 C N N 310 ILE CD1 C N N 311 ILE OXT O N N 312 ILE H H N N 313 ILE H2 H N N 314 ILE HA H N N 315 ILE HB H N N 316 ILE HG12 H N N 317 ILE HG13 H N N 318 ILE HG21 H N N 319 ILE HG22 H N N 320 ILE HG23 H N N 321 ILE HD11 H N N 322 ILE HD12 H N N 323 ILE HD13 H N N 324 ILE HXT H N N 325 LEU N N N N 326 LEU CA C N S 327 LEU C C N N 328 LEU O O N N 329 LEU CB C N N 330 LEU CG C N N 331 LEU CD1 C N N 332 LEU CD2 C N N 333 LEU OXT O N N 334 LEU H H N N 335 LEU H2 H N N 336 LEU HA H N N 337 LEU HB2 H N N 338 LEU HB3 H N N 339 LEU HG H N N 340 LEU HD11 H N N 341 LEU HD12 H N N 342 LEU HD13 H N N 343 LEU HD21 H N N 344 LEU HD22 H N N 345 LEU HD23 H N N 346 LEU HXT H N N 347 LYS N N N N 348 LYS CA C N S 349 LYS C C N N 350 LYS O O N N 351 LYS CB C N N 352 LYS CG C N N 353 LYS CD C N N 354 LYS CE C N N 355 LYS NZ N N N 356 LYS OXT O N N 357 LYS H H N N 358 LYS H2 H N N 359 LYS HA H N N 360 LYS HB2 H N N 361 LYS HB3 H N N 362 LYS HG2 H N N 363 LYS HG3 H N N 364 LYS HD2 H N N 365 LYS HD3 H N N 366 LYS HE2 H N N 367 LYS HE3 H N N 368 LYS HZ1 H N N 369 LYS HZ2 H N N 370 LYS HZ3 H N N 371 LYS HXT H N N 372 MET N N N N 373 MET CA C N S 374 MET C C N N 375 MET O O N N 376 MET CB C N N 377 MET CG C N N 378 MET SD S N N 379 MET CE C N N 380 MET OXT O N N 381 MET H H N N 382 MET H2 H N N 383 MET HA H N N 384 MET HB2 H N N 385 MET HB3 H N N 386 MET HG2 H N N 387 MET HG3 H N N 388 MET HE1 H N N 389 MET HE2 H N N 390 MET HE3 H N N 391 MET HXT H N N 392 PHE N N N N 393 PHE CA C N S 394 PHE C C N N 395 PHE O O N N 396 PHE CB C N N 397 PHE CG C Y N 398 PHE CD1 C Y N 399 PHE CD2 C Y N 400 PHE CE1 C Y N 401 PHE CE2 C Y N 402 PHE CZ C Y N 403 PHE OXT O N N 404 PHE H H N N 405 PHE H2 H N N 406 PHE HA H N N 407 PHE HB2 H N N 408 PHE HB3 H N N 409 PHE HD1 H N N 410 PHE HD2 H N N 411 PHE HE1 H N N 412 PHE HE2 H N N 413 PHE HZ H N N 414 PHE HXT H N N 415 PRO N N N N 416 PRO CA C N S 417 PRO C C N N 418 PRO O O N N 419 PRO CB C N N 420 PRO CG C N N 421 PRO CD C N N 422 PRO OXT O N N 423 PRO H H N N 424 PRO HA H N N 425 PRO HB2 H N N 426 PRO HB3 H N N 427 PRO HG2 H N N 428 PRO HG3 H N N 429 PRO HD2 H N N 430 PRO HD3 H N N 431 PRO HXT H N N 432 SER N N N N 433 SER CA C N S 434 SER C C N N 435 SER O O N N 436 SER CB C N N 437 SER OG O N N 438 SER OXT O N N 439 SER H H N N 440 SER H2 H N N 441 SER HA H N N 442 SER HB2 H N N 443 SER HB3 H N N 444 SER HG H N N 445 SER HXT H N N 446 THR N N N N 447 THR CA C N S 448 THR C C N N 449 THR O O N N 450 THR CB C N R 451 THR OG1 O N N 452 THR CG2 C N N 453 THR OXT O N N 454 THR H H N N 455 THR H2 H N N 456 THR HA H N N 457 THR HB H N N 458 THR HG1 H N N 459 THR HG21 H N N 460 THR HG22 H N N 461 THR HG23 H N N 462 THR HXT H N N 463 TRP N N N N 464 TRP CA C N S 465 TRP C C N N 466 TRP O O N N 467 TRP CB C N N 468 TRP CG C Y N 469 TRP CD1 C Y N 470 TRP CD2 C Y N 471 TRP NE1 N Y N 472 TRP CE2 C Y N 473 TRP CE3 C Y N 474 TRP CZ2 C Y N 475 TRP CZ3 C Y N 476 TRP CH2 C Y N 477 TRP OXT O N N 478 TRP H H N N 479 TRP H2 H N N 480 TRP HA H N N 481 TRP HB2 H N N 482 TRP HB3 H N N 483 TRP HD1 H N N 484 TRP HE1 H N N 485 TRP HE3 H N N 486 TRP HZ2 H N N 487 TRP HZ3 H N N 488 TRP HH2 H N N 489 TRP HXT H N N 490 TYR N N N N 491 TYR CA C N S 492 TYR C C N N 493 TYR O O N N 494 TYR CB C N N 495 TYR CG C Y N 496 TYR CD1 C Y N 497 TYR CD2 C Y N 498 TYR CE1 C Y N 499 TYR CE2 C Y N 500 TYR CZ C Y N 501 TYR OH O N N 502 TYR OXT O N N 503 TYR H H N N 504 TYR H2 H N N 505 TYR HA H N N 506 TYR HB2 H N N 507 TYR HB3 H N N 508 TYR HD1 H N N 509 TYR HD2 H N N 510 TYR HE1 H N N 511 TYR HE2 H N N 512 TYR HH H N N 513 TYR HXT H N N 514 VAL N N N N 515 VAL CA C N S 516 VAL C C N N 517 VAL O O N N 518 VAL CB C N N 519 VAL CG1 C N N 520 VAL CG2 C N N 521 VAL OXT O N N 522 VAL H H N N 523 VAL H2 H N N 524 VAL HA H N N 525 VAL HB H N N 526 VAL HG11 H N N 527 VAL HG12 H N N 528 VAL HG13 H N N 529 VAL HG21 H N N 530 VAL HG22 H N N 531 VAL HG23 H N N 532 VAL HXT H N N 533 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 HOH O H1 sing N N 299 HOH O H2 sing N N 300 ILE N CA sing N N 301 ILE N H sing N N 302 ILE N H2 sing N N 303 ILE CA C sing N N 304 ILE CA CB sing N N 305 ILE CA HA sing N N 306 ILE C O doub N N 307 ILE C OXT sing N N 308 ILE CB CG1 sing N N 309 ILE CB CG2 sing N N 310 ILE CB HB sing N N 311 ILE CG1 CD1 sing N N 312 ILE CG1 HG12 sing N N 313 ILE CG1 HG13 sing N N 314 ILE CG2 HG21 sing N N 315 ILE CG2 HG22 sing N N 316 ILE CG2 HG23 sing N N 317 ILE CD1 HD11 sing N N 318 ILE CD1 HD12 sing N N 319 ILE CD1 HD13 sing N N 320 ILE OXT HXT sing N N 321 LEU N CA sing N N 322 LEU N H sing N N 323 LEU N H2 sing N N 324 LEU CA C sing N N 325 LEU CA CB sing N N 326 LEU CA HA sing N N 327 LEU C O doub N N 328 LEU C OXT sing N N 329 LEU CB CG sing N N 330 LEU CB HB2 sing N N 331 LEU CB HB3 sing N N 332 LEU CG CD1 sing N N 333 LEU CG CD2 sing N N 334 LEU CG HG sing N N 335 LEU CD1 HD11 sing N N 336 LEU CD1 HD12 sing N N 337 LEU CD1 HD13 sing N N 338 LEU CD2 HD21 sing N N 339 LEU CD2 HD22 sing N N 340 LEU CD2 HD23 sing N N 341 LEU OXT HXT sing N N 342 LYS N CA sing N N 343 LYS N H sing N N 344 LYS N H2 sing N N 345 LYS CA C sing N N 346 LYS CA CB sing N N 347 LYS CA HA sing N N 348 LYS C O doub N N 349 LYS C OXT sing N N 350 LYS CB CG sing N N 351 LYS CB HB2 sing N N 352 LYS CB HB3 sing N N 353 LYS CG CD sing N N 354 LYS CG HG2 sing N N 355 LYS CG HG3 sing N N 356 LYS CD CE sing N N 357 LYS CD HD2 sing N N 358 LYS CD HD3 sing N N 359 LYS CE NZ sing N N 360 LYS CE HE2 sing N N 361 LYS CE HE3 sing N N 362 LYS NZ HZ1 sing N N 363 LYS NZ HZ2 sing N N 364 LYS NZ HZ3 sing N N 365 LYS OXT HXT sing N N 366 MET N CA sing N N 367 MET N H sing N N 368 MET N H2 sing N N 369 MET CA C sing N N 370 MET CA CB sing N N 371 MET CA HA sing N N 372 MET C O doub N N 373 MET C OXT sing N N 374 MET CB CG sing N N 375 MET CB HB2 sing N N 376 MET CB HB3 sing N N 377 MET CG SD sing N N 378 MET CG HG2 sing N N 379 MET CG HG3 sing N N 380 MET SD CE sing N N 381 MET CE HE1 sing N N 382 MET CE HE2 sing N N 383 MET CE HE3 sing N N 384 MET OXT HXT sing N N 385 PHE N CA sing N N 386 PHE N H sing N N 387 PHE N H2 sing N N 388 PHE CA C sing N N 389 PHE CA CB sing N N 390 PHE CA HA sing N N 391 PHE C O doub N N 392 PHE C OXT sing N N 393 PHE CB CG sing N N 394 PHE CB HB2 sing N N 395 PHE CB HB3 sing N N 396 PHE CG CD1 doub Y N 397 PHE CG CD2 sing Y N 398 PHE CD1 CE1 sing Y N 399 PHE CD1 HD1 sing N N 400 PHE CD2 CE2 doub Y N 401 PHE CD2 HD2 sing N N 402 PHE CE1 CZ doub Y N 403 PHE CE1 HE1 sing N N 404 PHE CE2 CZ sing Y N 405 PHE CE2 HE2 sing N N 406 PHE CZ HZ sing N N 407 PHE OXT HXT sing N N 408 PRO N CA sing N N 409 PRO N CD sing N N 410 PRO N H sing N N 411 PRO CA C sing N N 412 PRO CA CB sing N N 413 PRO CA HA sing N N 414 PRO C O doub N N 415 PRO C OXT sing N N 416 PRO CB CG sing N N 417 PRO CB HB2 sing N N 418 PRO CB HB3 sing N N 419 PRO CG CD sing N N 420 PRO CG HG2 sing N N 421 PRO CG HG3 sing N N 422 PRO CD HD2 sing N N 423 PRO CD HD3 sing N N 424 PRO OXT HXT sing N N 425 SER N CA sing N N 426 SER N H sing N N 427 SER N H2 sing N N 428 SER CA C sing N N 429 SER CA CB sing N N 430 SER CA HA sing N N 431 SER C O doub N N 432 SER C OXT sing N N 433 SER CB OG sing N N 434 SER CB HB2 sing N N 435 SER CB HB3 sing N N 436 SER OG HG sing N N 437 SER OXT HXT sing N N 438 THR N CA sing N N 439 THR N H sing N N 440 THR N H2 sing N N 441 THR CA C sing N N 442 THR CA CB sing N N 443 THR CA HA sing N N 444 THR C O doub N N 445 THR C OXT sing N N 446 THR CB OG1 sing N N 447 THR CB CG2 sing N N 448 THR CB HB sing N N 449 THR OG1 HG1 sing N N 450 THR CG2 HG21 sing N N 451 THR CG2 HG22 sing N N 452 THR CG2 HG23 sing N N 453 THR OXT HXT sing N N 454 TRP N CA sing N N 455 TRP N H sing N N 456 TRP N H2 sing N N 457 TRP CA C sing N N 458 TRP CA CB sing N N 459 TRP CA HA sing N N 460 TRP C O doub N N 461 TRP C OXT sing N N 462 TRP CB CG sing N N 463 TRP CB HB2 sing N N 464 TRP CB HB3 sing N N 465 TRP CG CD1 doub Y N 466 TRP CG CD2 sing Y N 467 TRP CD1 NE1 sing Y N 468 TRP CD1 HD1 sing N N 469 TRP CD2 CE2 doub Y N 470 TRP CD2 CE3 sing Y N 471 TRP NE1 CE2 sing Y N 472 TRP NE1 HE1 sing N N 473 TRP CE2 CZ2 sing Y N 474 TRP CE3 CZ3 doub Y N 475 TRP CE3 HE3 sing N N 476 TRP CZ2 CH2 doub Y N 477 TRP CZ2 HZ2 sing N N 478 TRP CZ3 CH2 sing Y N 479 TRP CZ3 HZ3 sing N N 480 TRP CH2 HH2 sing N N 481 TRP OXT HXT sing N N 482 TYR N CA sing N N 483 TYR N H sing N N 484 TYR N H2 sing N N 485 TYR CA C sing N N 486 TYR CA CB sing N N 487 TYR CA HA sing N N 488 TYR C O doub N N 489 TYR C OXT sing N N 490 TYR CB CG sing N N 491 TYR CB HB2 sing N N 492 TYR CB HB3 sing N N 493 TYR CG CD1 doub Y N 494 TYR CG CD2 sing Y N 495 TYR CD1 CE1 sing Y N 496 TYR CD1 HD1 sing N N 497 TYR CD2 CE2 doub Y N 498 TYR CD2 HD2 sing N N 499 TYR CE1 CZ doub Y N 500 TYR CE1 HE1 sing N N 501 TYR CE2 CZ sing Y N 502 TYR CE2 HE2 sing N N 503 TYR CZ OH sing N N 504 TYR OH HH sing N N 505 TYR OXT HXT sing N N 506 VAL N CA sing N N 507 VAL N H sing N N 508 VAL N H2 sing N N 509 VAL CA C sing N N 510 VAL CA CB sing N N 511 VAL CA HA sing N N 512 VAL C O doub N N 513 VAL C OXT sing N N 514 VAL CB CG1 sing N N 515 VAL CB CG2 sing N N 516 VAL CB HB sing N N 517 VAL CG1 HG11 sing N N 518 VAL CG1 HG12 sing N N 519 VAL CG1 HG13 sing N N 520 VAL CG2 HG21 sing N N 521 VAL CG2 HG22 sing N N 522 VAL CG2 HG23 sing N N 523 VAL OXT HXT sing N N 524 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1PUF 'double helix' 1PUF 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 2 1_555 B DG 20 1_555 -0.056 -0.472 0.160 4.192 -10.210 -4.204 1 D_DC2:DG40_E D 2 ? E 40 ? 19 1 1 A DT 3 1_555 B DA 19 1_555 -0.641 -0.364 0.204 5.641 -18.984 -8.823 2 D_DT3:DA39_E D 3 ? E 39 ? 20 1 1 A DC 4 1_555 B DG 18 1_555 -0.178 -0.126 0.145 0.635 -10.437 6.655 3 D_DC4:DG38_E D 4 ? E 38 ? 19 1 1 A DT 5 1_555 B DA 17 1_555 0.366 0.002 0.175 5.149 -20.058 4.325 4 D_DT5:DA37_E D 5 ? E 37 ? 20 1 1 A DA 6 1_555 B DT 16 1_555 0.030 0.039 -0.095 -8.973 -4.865 2.061 5 D_DA6:DT36_E D 6 ? E 36 ? 20 1 1 A DT 7 1_555 B DA 15 1_555 -0.171 -0.064 0.052 5.059 -6.542 3.652 6 D_DT7:DA35_E D 7 ? E 35 ? 20 1 1 A DG 8 1_555 B DC 14 1_555 -0.334 -0.125 -0.077 2.110 -11.498 2.324 7 D_DG8:DC34_E D 8 ? E 34 ? 19 1 1 A DA 9 1_555 B DT 13 1_555 0.116 -0.050 -0.053 -5.569 -12.176 6.732 8 D_DA9:DT33_E D 9 ? E 33 ? 20 1 1 A DT 10 1_555 B DA 12 1_555 0.006 -0.103 0.214 -9.162 -18.328 0.304 9 D_DT10:DA32_E D 10 ? E 32 ? 20 1 1 A DT 11 1_555 B DA 11 1_555 -0.048 -0.056 0.266 -14.312 -21.587 2.277 10 D_DT11:DA31_E D 11 ? E 31 ? 20 1 1 A DT 12 1_555 B DA 10 1_555 0.075 -0.167 -0.079 -11.304 -14.841 5.241 11 D_DT12:DA30_E D 12 ? E 30 ? 20 1 1 A DA 13 1_555 B DT 9 1_555 -0.093 -0.105 0.190 -4.081 -7.698 0.109 12 D_DA13:DT29_E D 13 ? E 29 ? 20 1 1 A DC 14 1_555 B DG 8 1_555 0.373 -0.234 0.040 3.252 -10.130 -1.677 13 D_DC14:DG28_E D 14 ? E 28 ? 19 1 1 A DG 15 1_555 B DC 7 1_555 -0.158 -0.233 0.130 7.386 -6.979 -2.195 14 D_DG15:DC27_E D 15 ? E 27 ? 19 1 1 A DA 16 1_555 B DT 6 1_555 0.224 0.005 -0.048 6.908 -9.471 -3.116 15 D_DA16:DT26_E D 16 ? E 26 ? 20 1 1 A DC 17 1_555 B DG 5 1_555 0.182 -0.009 -0.073 15.514 -18.598 0.756 16 D_DC17:DG25_E D 17 ? E 25 ? 19 1 1 A DG 18 1_555 B DC 4 1_555 -0.266 -0.165 -0.264 -19.457 -11.262 -3.375 17 D_DG18:DC24_E D 18 ? E 24 ? 19 1 1 A DC 19 1_555 B DG 3 1_555 -0.068 -0.200 0.054 -10.331 0.849 -3.803 18 D_DC19:DG23_E D 19 ? E 23 ? 19 1 1 A DT 20 1_555 B DA 2 1_555 0.483 0.147 0.002 0.938 0.814 3.109 19 D_DT20:DA22_E D 20 ? E 22 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 2 1_555 B DG 20 1_555 A DT 3 1_555 B DA 19 1_555 -0.349 0.014 3.192 -0.309 3.822 30.558 -0.702 0.598 3.173 7.215 0.584 30.792 1 DD_DC2DT3:DA39DG40_EE D 2 ? E 40 ? D 3 ? E 39 ? 1 A DT 3 1_555 B DA 19 1_555 A DC 4 1_555 B DG 18 1_555 0.963 0.445 3.393 4.855 1.375 42.848 0.462 -0.806 3.489 1.874 -6.618 43.131 2 DD_DT3DC4:DG38DA39_EE D 3 ? E 39 ? D 4 ? E 38 ? 1 A DC 4 1_555 B DG 18 1_555 A DT 5 1_555 B DA 17 1_555 -0.379 0.490 3.250 2.374 3.056 31.406 0.335 1.133 3.246 5.618 -4.365 31.637 3 DD_DC4DT5:DA37DG38_EE D 4 ? E 38 ? D 5 ? E 37 ? 1 A DT 5 1_555 B DA 17 1_555 A DA 6 1_555 B DT 16 1_555 0.139 1.525 3.549 0.561 -5.529 49.349 2.248 -0.122 3.371 -6.598 -0.670 49.641 4 DD_DT5DA6:DT36DA37_EE D 5 ? E 37 ? D 6 ? E 36 ? 1 A DA 6 1_555 B DT 16 1_555 A DT 7 1_555 B DA 15 1_555 -0.136 0.058 3.087 -1.124 0.686 24.547 -0.063 -0.007 3.090 1.611 2.641 24.582 5 DD_DA6DT7:DA35DT36_EE D 6 ? E 36 ? D 7 ? E 35 ? 1 A DT 7 1_555 B DA 15 1_555 A DG 8 1_555 B DC 14 1_555 -0.321 0.554 3.332 -1.907 8.479 37.041 -0.273 0.240 3.385 13.126 2.953 38.012 6 DD_DT7DG8:DC34DA35_EE D 7 ? E 35 ? D 8 ? E 34 ? 1 A DG 8 1_555 B DC 14 1_555 A DA 9 1_555 B DT 13 1_555 0.124 -0.587 3.450 0.603 1.870 39.665 -1.093 -0.109 3.422 2.754 -0.888 39.712 7 DD_DG8DA9:DT33DC34_EE D 8 ? E 34 ? D 9 ? E 33 ? 1 A DA 9 1_555 B DT 13 1_555 A DT 10 1_555 B DA 12 1_555 -0.716 -0.701 3.349 -3.830 -0.793 33.521 -1.074 0.588 3.422 -1.370 6.612 33.742 8 DD_DA9DT10:DA32DT33_EE D 9 ? E 33 ? D 10 ? E 32 ? 1 A DT 10 1_555 B DA 12 1_555 A DT 11 1_555 B DA 11 1_555 -0.129 -0.141 3.299 -0.785 0.269 36.664 -0.261 0.097 3.299 0.428 1.248 36.673 9 DD_DT10DT11:DA31DA32_EE D 10 ? E 32 ? D 11 ? E 31 ? 1 A DT 11 1_555 B DA 11 1_555 A DT 12 1_555 B DA 10 1_555 -0.463 0.350 3.143 1.586 8.213 33.968 -0.622 1.004 3.116 13.799 -2.664 34.953 10 DD_DT11DT12:DA30DA31_EE D 11 ? E 31 ? D 12 ? E 30 ? 1 A DT 12 1_555 B DA 10 1_555 A DA 13 1_555 B DT 9 1_555 0.548 0.135 3.265 -2.450 4.959 36.771 -0.446 -1.185 3.213 7.807 3.856 37.171 11 DD_DT12DA13:DT29DA30_EE D 12 ? E 30 ? D 13 ? E 29 ? 1 A DA 13 1_555 B DT 9 1_555 A DC 14 1_555 B DG 8 1_555 -0.175 -0.623 3.136 1.898 -0.551 28.200 -1.154 0.781 3.129 -1.129 -3.890 28.268 12 DD_DA13DC14:DG28DT29_EE D 13 ? E 29 ? D 14 ? E 28 ? 1 A DC 14 1_555 B DG 8 1_555 A DG 15 1_555 B DC 7 1_555 -0.692 0.205 3.223 -0.797 7.630 32.868 -0.881 1.064 3.204 13.260 1.385 33.727 13 DD_DC14DG15:DC27DG28_EE D 14 ? E 28 ? D 15 ? E 27 ? 1 A DG 15 1_555 B DC 7 1_555 A DA 16 1_555 B DT 6 1_555 0.197 -0.251 3.358 0.505 4.346 34.905 -1.078 -0.250 3.306 7.210 -0.839 35.170 14 DD_DG15DA16:DT26DC27_EE D 15 ? E 27 ? D 16 ? E 26 ? 1 A DA 16 1_555 B DT 6 1_555 A DC 17 1_555 B DG 5 1_555 0.766 -0.784 3.016 -2.339 4.005 30.728 -2.154 -1.834 2.829 7.503 4.382 31.068 15 DD_DA16DC17:DG25DT26_EE D 16 ? E 26 ? D 17 ? E 25 ? 1 A DC 17 1_555 B DG 5 1_555 A DG 18 1_555 B DC 4 1_555 -0.125 -1.103 4.016 3.425 11.101 39.939 -2.953 0.607 3.576 15.850 -4.890 41.528 16 DD_DC17DG18:DC24DG25_EE D 17 ? E 25 ? D 18 ? E 24 ? 1 A DG 18 1_555 B DC 4 1_555 A DC 19 1_555 B DG 3 1_555 0.360 -0.476 3.156 0.662 3.489 31.058 -1.517 -0.548 3.092 6.488 -1.232 31.256 17 DD_DG18DC19:DG23DC24_EE D 18 ? E 24 ? D 19 ? E 23 ? 1 A DC 19 1_555 B DG 3 1_555 A DT 20 1_555 B DA 2 1_555 -0.253 -0.434 3.110 1.543 4.576 28.359 -1.838 0.834 2.987 9.256 -3.120 28.759 18 DD_DC19DT20:DA22DG23_EE D 19 ? E 23 ? D 20 ? E 22 ? # _pdbx_entity_nonpoly.entity_id 5 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1B72 _pdbx_initial_refinement_model.details 'PDB ENTRY 1B72' #