data_1R77 # _entry.id 1R77 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1R77 pdb_00001r77 10.2210/pdb1r77/pdb RCSB RCSB020521 ? ? WWPDB D_1000020521 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-04-12 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-14 5 'Structure model' 1 4 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1R77 _pdbx_database_status.recvd_initial_deposition_date 2003-10-20 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lu, J.Z.' 1 'Fujiwara, T.' 2 'Komatsuzawa, H.' 3 'Sugai, M.' 4 'Sakon, J.' 5 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Cell Wall-targeting Domain of Glycylglycine Endopeptidase Distinguishes among Peptidoglycan Cross-bridges.' J.Biol.Chem. 281 549 558 2006 JBCHA3 US 0021-9258 0071 ? 16257954 10.1074/jbc.M509691200 1 'Purification and molecular characterization of glycylglycine endopeptidase produced by Staphylococcus capitis EPK1.' J.Bacteriol. 4 1193 1202 1997 JOBAAY US 0021-9193 0767 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lu, J.Z.' 1 ? primary 'Fujiwara, T.' 2 ? primary 'Komatsuzawa, H.' 3 ? primary 'Sugai, M.' 4 ? primary 'Sakon, J.' 5 ? 1 'Sugai, M.' 6 ? 1 'Fujiwara, T.' 7 ? 1 'Akiyama, T.' 8 ? 1 'Ohara, M.' 9 ? 1 'Komatsuzawa, H.' 10 ? 1 'Inoue, S.' 11 ? 1 'Suginaka, H.' 12 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Cell Wall Targeting Domain of Glycylglycine Endopeptidase ALE-1' 11759.253 2 3.4.24.7 'FLAG-tag added at N-terminus' 'Cell Wall Targeting Domain' ? 2 water nat water 18.015 221 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;DYKDDDDKVKLYKTNKYGTLYKSESASFTANTDIITRLTGPFRSMPQSGVLRKGLTIKYDEVMKQDGHVWVGYNTNSGKR VYLPVRTWNESTGELGPLWGTIK ; _entity_poly.pdbx_seq_one_letter_code_can ;DYKDDDDKVKLYKTNKYGTLYKSESASFTANTDIITRLTGPFRSMPQSGVLRKGLTIKYDEVMKQDGHVWVGYNTNSGKR VYLPVRTWNESTGELGPLWGTIK ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 TYR n 1 3 LYS n 1 4 ASP n 1 5 ASP n 1 6 ASP n 1 7 ASP n 1 8 LYS n 1 9 VAL n 1 10 LYS n 1 11 LEU n 1 12 TYR n 1 13 LYS n 1 14 THR n 1 15 ASN n 1 16 LYS n 1 17 TYR n 1 18 GLY n 1 19 THR n 1 20 LEU n 1 21 TYR n 1 22 LYS n 1 23 SER n 1 24 GLU n 1 25 SER n 1 26 ALA n 1 27 SER n 1 28 PHE n 1 29 THR n 1 30 ALA n 1 31 ASN n 1 32 THR n 1 33 ASP n 1 34 ILE n 1 35 ILE n 1 36 THR n 1 37 ARG n 1 38 LEU n 1 39 THR n 1 40 GLY n 1 41 PRO n 1 42 PHE n 1 43 ARG n 1 44 SER n 1 45 MET n 1 46 PRO n 1 47 GLN n 1 48 SER n 1 49 GLY n 1 50 VAL n 1 51 LEU n 1 52 ARG n 1 53 LYS n 1 54 GLY n 1 55 LEU n 1 56 THR n 1 57 ILE n 1 58 LYS n 1 59 TYR n 1 60 ASP n 1 61 GLU n 1 62 VAL n 1 63 MET n 1 64 LYS n 1 65 GLN n 1 66 ASP n 1 67 GLY n 1 68 HIS n 1 69 VAL n 1 70 TRP n 1 71 VAL n 1 72 GLY n 1 73 TYR n 1 74 ASN n 1 75 THR n 1 76 ASN n 1 77 SER n 1 78 GLY n 1 79 LYS n 1 80 ARG n 1 81 VAL n 1 82 TYR n 1 83 LEU n 1 84 PRO n 1 85 VAL n 1 86 ARG n 1 87 THR n 1 88 TRP n 1 89 ASN n 1 90 GLU n 1 91 SER n 1 92 THR n 1 93 GLY n 1 94 GLU n 1 95 LEU n 1 96 GLY n 1 97 PRO n 1 98 LEU n 1 99 TRP n 1 100 GLY n 1 101 THR n 1 102 ILE n 1 103 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Staphylococcus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain EPK1 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Staphylococcus capitis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 29388 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pTF479 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 260 ? ? ? A . n A 1 2 TYR 2 261 ? ? ? A . n A 1 3 LYS 3 262 ? ? ? A . n A 1 4 ASP 4 263 ? ? ? A . n A 1 5 ASP 5 264 264 ASP ASP A . n A 1 6 ASP 6 265 265 ASP ASP A . n A 1 7 ASP 7 266 266 ASP ASP A . n A 1 8 LYS 8 267 267 LYS LYS A . n A 1 9 VAL 9 268 268 VAL VAL A . n A 1 10 LYS 10 269 269 LYS LYS A . n A 1 11 LEU 11 270 270 LEU LEU A . n A 1 12 TYR 12 271 271 TYR TYR A . n A 1 13 LYS 13 272 272 LYS LYS A . n A 1 14 THR 14 273 273 THR THR A . n A 1 15 ASN 15 274 274 ASN ASN A . n A 1 16 LYS 16 275 275 LYS LYS A . n A 1 17 TYR 17 276 276 TYR TYR A . n A 1 18 GLY 18 277 277 GLY GLY A . n A 1 19 THR 19 278 278 THR THR A . n A 1 20 LEU 20 279 279 LEU LEU A . n A 1 21 TYR 21 280 280 TYR TYR A . n A 1 22 LYS 22 281 281 LYS LYS A . n A 1 23 SER 23 282 282 SER SER A . n A 1 24 GLU 24 283 283 GLU GLU A . n A 1 25 SER 25 284 284 SER SER A . n A 1 26 ALA 26 285 285 ALA ALA A . n A 1 27 SER 27 286 286 SER SER A . n A 1 28 PHE 28 287 287 PHE PHE A . n A 1 29 THR 29 288 288 THR THR A . n A 1 30 ALA 30 289 289 ALA ALA A . n A 1 31 ASN 31 290 290 ASN ASN A . n A 1 32 THR 32 291 291 THR THR A . n A 1 33 ASP 33 292 292 ASP ASP A . n A 1 34 ILE 34 293 293 ILE ILE A . n A 1 35 ILE 35 294 294 ILE ILE A . n A 1 36 THR 36 295 295 THR THR A . n A 1 37 ARG 37 296 296 ARG ARG A . n A 1 38 LEU 38 297 297 LEU LEU A . n A 1 39 THR 39 298 298 THR THR A . n A 1 40 GLY 40 299 299 GLY GLY A . n A 1 41 PRO 41 300 300 PRO PRO A . n A 1 42 PHE 42 301 301 PHE PHE A . n A 1 43 ARG 43 302 302 ARG ARG A . n A 1 44 SER 44 303 303 SER SER A . n A 1 45 MET 45 304 304 MET MET A . n A 1 46 PRO 46 305 305 PRO PRO A . n A 1 47 GLN 47 306 306 GLN GLN A . n A 1 48 SER 48 307 307 SER SER A . n A 1 49 GLY 49 308 308 GLY GLY A . n A 1 50 VAL 50 309 309 VAL VAL A . n A 1 51 LEU 51 310 310 LEU LEU A . n A 1 52 ARG 52 311 311 ARG ARG A . n A 1 53 LYS 53 312 312 LYS LYS A . n A 1 54 GLY 54 313 313 GLY GLY A . n A 1 55 LEU 55 314 314 LEU LEU A . n A 1 56 THR 56 315 315 THR THR A . n A 1 57 ILE 57 316 316 ILE ILE A . n A 1 58 LYS 58 317 317 LYS LYS A . n A 1 59 TYR 59 318 318 TYR TYR A . n A 1 60 ASP 60 319 319 ASP ASP A . n A 1 61 GLU 61 320 320 GLU GLU A . n A 1 62 VAL 62 321 321 VAL VAL A . n A 1 63 MET 63 322 322 MET MET A . n A 1 64 LYS 64 323 323 LYS LYS A . n A 1 65 GLN 65 324 324 GLN GLN A . n A 1 66 ASP 66 325 325 ASP ASP A . n A 1 67 GLY 67 326 326 GLY GLY A . n A 1 68 HIS 68 327 327 HIS HIS A . n A 1 69 VAL 69 328 328 VAL VAL A . n A 1 70 TRP 70 329 329 TRP TRP A . n A 1 71 VAL 71 330 330 VAL VAL A . n A 1 72 GLY 72 331 331 GLY GLY A . n A 1 73 TYR 73 332 332 TYR TYR A . n A 1 74 ASN 74 333 333 ASN ASN A . n A 1 75 THR 75 334 334 THR THR A . n A 1 76 ASN 76 335 335 ASN ASN A . n A 1 77 SER 77 336 336 SER SER A . n A 1 78 GLY 78 337 337 GLY GLY A . n A 1 79 LYS 79 338 338 LYS LYS A . n A 1 80 ARG 80 339 339 ARG ARG A . n A 1 81 VAL 81 340 340 VAL VAL A . n A 1 82 TYR 82 341 341 TYR TYR A . n A 1 83 LEU 83 342 342 LEU LEU A . n A 1 84 PRO 84 343 343 PRO PRO A . n A 1 85 VAL 85 344 344 VAL VAL A . n A 1 86 ARG 86 345 345 ARG ARG A . n A 1 87 THR 87 346 346 THR THR A . n A 1 88 TRP 88 347 347 TRP TRP A . n A 1 89 ASN 89 348 348 ASN ASN A . n A 1 90 GLU 90 349 349 GLU GLU A . n A 1 91 SER 91 350 350 SER SER A . n A 1 92 THR 92 351 351 THR THR A . n A 1 93 GLY 93 352 352 GLY GLY A . n A 1 94 GLU 94 353 353 GLU GLU A . n A 1 95 LEU 95 354 354 LEU LEU A . n A 1 96 GLY 96 355 355 GLY GLY A . n A 1 97 PRO 97 356 356 PRO PRO A . n A 1 98 LEU 98 357 357 LEU LEU A . n A 1 99 TRP 99 358 358 TRP TRP A . n A 1 100 GLY 100 359 359 GLY GLY A . n A 1 101 THR 101 360 360 THR THR A . n A 1 102 ILE 102 361 361 ILE ILE A . n A 1 103 LYS 103 362 362 LYS LYS A . n B 1 1 ASP 1 260 260 ASP ASP B . n B 1 2 TYR 2 261 261 TYR TYR B . n B 1 3 LYS 3 262 262 LYS LYS B . n B 1 4 ASP 4 263 263 ASP ASP B . n B 1 5 ASP 5 264 264 ASP ASP B . n B 1 6 ASP 6 265 265 ASP ASP B . n B 1 7 ASP 7 266 266 ASP ASP B . n B 1 8 LYS 8 267 267 LYS LYS B . n B 1 9 VAL 9 268 268 VAL VAL B . n B 1 10 LYS 10 269 269 LYS LYS B . n B 1 11 LEU 11 270 270 LEU LEU B . n B 1 12 TYR 12 271 271 TYR TYR B . n B 1 13 LYS 13 272 272 LYS LYS B . n B 1 14 THR 14 273 273 THR THR B . n B 1 15 ASN 15 274 274 ASN ASN B . n B 1 16 LYS 16 275 275 LYS LYS B . n B 1 17 TYR 17 276 276 TYR TYR B . n B 1 18 GLY 18 277 277 GLY GLY B . n B 1 19 THR 19 278 278 THR THR B . n B 1 20 LEU 20 279 279 LEU LEU B . n B 1 21 TYR 21 280 280 TYR TYR B . n B 1 22 LYS 22 281 281 LYS LYS B . n B 1 23 SER 23 282 282 SER SER B . n B 1 24 GLU 24 283 283 GLU GLU B . n B 1 25 SER 25 284 284 SER SER B . n B 1 26 ALA 26 285 285 ALA ALA B . n B 1 27 SER 27 286 286 SER SER B . n B 1 28 PHE 28 287 287 PHE PHE B . n B 1 29 THR 29 288 288 THR THR B . n B 1 30 ALA 30 289 289 ALA ALA B . n B 1 31 ASN 31 290 290 ASN ASN B . n B 1 32 THR 32 291 291 THR THR B . n B 1 33 ASP 33 292 292 ASP ASP B . n B 1 34 ILE 34 293 293 ILE ILE B . n B 1 35 ILE 35 294 294 ILE ILE B . n B 1 36 THR 36 295 295 THR THR B . n B 1 37 ARG 37 296 296 ARG ARG B . n B 1 38 LEU 38 297 297 LEU LEU B . n B 1 39 THR 39 298 298 THR THR B . n B 1 40 GLY 40 299 299 GLY GLY B . n B 1 41 PRO 41 300 300 PRO PRO B . n B 1 42 PHE 42 301 301 PHE PHE B . n B 1 43 ARG 43 302 302 ARG ARG B . n B 1 44 SER 44 303 303 SER SER B . n B 1 45 MET 45 304 304 MET MET B . n B 1 46 PRO 46 305 305 PRO PRO B . n B 1 47 GLN 47 306 306 GLN GLN B . n B 1 48 SER 48 307 307 SER SER B . n B 1 49 GLY 49 308 308 GLY GLY B . n B 1 50 VAL 50 309 309 VAL VAL B . n B 1 51 LEU 51 310 310 LEU LEU B . n B 1 52 ARG 52 311 311 ARG ARG B . n B 1 53 LYS 53 312 312 LYS LYS B . n B 1 54 GLY 54 313 313 GLY GLY B . n B 1 55 LEU 55 314 314 LEU LEU B . n B 1 56 THR 56 315 315 THR THR B . n B 1 57 ILE 57 316 316 ILE ILE B . n B 1 58 LYS 58 317 317 LYS LYS B . n B 1 59 TYR 59 318 318 TYR TYR B . n B 1 60 ASP 60 319 319 ASP ASP B . n B 1 61 GLU 61 320 320 GLU GLU B . n B 1 62 VAL 62 321 321 VAL VAL B . n B 1 63 MET 63 322 322 MET MET B . n B 1 64 LYS 64 323 323 LYS LYS B . n B 1 65 GLN 65 324 324 GLN GLN B . n B 1 66 ASP 66 325 325 ASP ASP B . n B 1 67 GLY 67 326 326 GLY GLY B . n B 1 68 HIS 68 327 327 HIS HIS B . n B 1 69 VAL 69 328 328 VAL VAL B . n B 1 70 TRP 70 329 329 TRP TRP B . n B 1 71 VAL 71 330 330 VAL VAL B . n B 1 72 GLY 72 331 331 GLY GLY B . n B 1 73 TYR 73 332 332 TYR TYR B . n B 1 74 ASN 74 333 333 ASN ASN B . n B 1 75 THR 75 334 334 THR THR B . n B 1 76 ASN 76 335 335 ASN ASN B . n B 1 77 SER 77 336 336 SER SER B . n B 1 78 GLY 78 337 337 GLY GLY B . n B 1 79 LYS 79 338 338 LYS LYS B . n B 1 80 ARG 80 339 339 ARG ARG B . n B 1 81 VAL 81 340 340 VAL VAL B . n B 1 82 TYR 82 341 341 TYR TYR B . n B 1 83 LEU 83 342 342 LEU LEU B . n B 1 84 PRO 84 343 343 PRO PRO B . n B 1 85 VAL 85 344 344 VAL VAL B . n B 1 86 ARG 86 345 345 ARG ARG B . n B 1 87 THR 87 346 346 THR THR B . n B 1 88 TRP 88 347 347 TRP TRP B . n B 1 89 ASN 89 348 348 ASN ASN B . n B 1 90 GLU 90 349 349 GLU GLU B . n B 1 91 SER 91 350 350 SER SER B . n B 1 92 THR 92 351 351 THR THR B . n B 1 93 GLY 93 352 352 GLY GLY B . n B 1 94 GLU 94 353 353 GLU GLU B . n B 1 95 LEU 95 354 354 LEU LEU B . n B 1 96 GLY 96 355 355 GLY GLY B . n B 1 97 PRO 97 356 356 PRO PRO B . n B 1 98 LEU 98 357 357 LEU LEU B . n B 1 99 TRP 99 358 358 TRP TRP B . n B 1 100 GLY 100 359 359 GLY GLY B . n B 1 101 THR 101 360 360 THR THR B . n B 1 102 ILE 102 361 361 ILE ILE B . n B 1 103 LYS 103 362 362 LYS LYS B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 1001 1001 HOH HOH A . C 2 HOH 2 1008 1008 HOH HOH A . C 2 HOH 3 1010 1010 HOH HOH A . C 2 HOH 4 1011 1011 HOH HOH A . C 2 HOH 5 1012 1012 HOH HOH A . C 2 HOH 6 1013 1013 HOH HOH A . C 2 HOH 7 1014 1014 HOH HOH A . C 2 HOH 8 1016 1016 HOH HOH A . C 2 HOH 9 1017 1017 HOH HOH A . C 2 HOH 10 1024 1024 HOH HOH A . C 2 HOH 11 1026 1026 HOH HOH A . C 2 HOH 12 1027 1027 HOH HOH A . C 2 HOH 13 1031 1031 HOH HOH A . C 2 HOH 14 1032 1032 HOH HOH A . C 2 HOH 15 1036 1036 HOH HOH A . C 2 HOH 16 1038 1038 HOH HOH A . C 2 HOH 17 1040 1040 HOH HOH A . C 2 HOH 18 1042 1042 HOH HOH A . C 2 HOH 19 1048 1048 HOH HOH A . C 2 HOH 20 1050 1050 HOH HOH A . C 2 HOH 21 1052 1052 HOH HOH A . C 2 HOH 22 1053 1053 HOH HOH A . C 2 HOH 23 1057 1057 HOH HOH A . C 2 HOH 24 1058 1058 HOH HOH A . C 2 HOH 25 1059 1059 HOH HOH A . C 2 HOH 26 1066 1066 HOH HOH A . C 2 HOH 27 1067 1067 HOH HOH A . C 2 HOH 28 1068 1068 HOH HOH A . C 2 HOH 29 1069 1069 HOH HOH A . C 2 HOH 30 1072 1072 HOH HOH A . C 2 HOH 31 1075 1075 HOH HOH A . C 2 HOH 32 1078 1078 HOH HOH A . C 2 HOH 33 1079 1079 HOH HOH A . C 2 HOH 34 1082 1082 HOH HOH A . C 2 HOH 35 1083 1083 HOH HOH A . C 2 HOH 36 1084 1084 HOH HOH A . C 2 HOH 37 1085 1085 HOH HOH A . C 2 HOH 38 1086 1086 HOH HOH A . C 2 HOH 39 1087 1087 HOH HOH A . C 2 HOH 40 1092 1092 HOH HOH A . C 2 HOH 41 1096 1096 HOH HOH A . C 2 HOH 42 1097 1097 HOH HOH A . C 2 HOH 43 1099 1099 HOH HOH A . C 2 HOH 44 1101 1101 HOH HOH A . C 2 HOH 45 1104 1104 HOH HOH A . C 2 HOH 46 1107 1107 HOH HOH A . C 2 HOH 47 1109 1109 HOH HOH A . C 2 HOH 48 1112 1112 HOH HOH A . C 2 HOH 49 1113 1113 HOH HOH A . C 2 HOH 50 1114 1114 HOH HOH A . C 2 HOH 51 1116 1116 HOH HOH A . C 2 HOH 52 1118 1118 HOH HOH A . C 2 HOH 53 1119 1119 HOH HOH A . C 2 HOH 54 1122 1122 HOH HOH A . C 2 HOH 55 1124 1124 HOH HOH A . C 2 HOH 56 1127 1127 HOH HOH A . C 2 HOH 57 1130 1130 HOH HOH A . C 2 HOH 58 1131 1131 HOH HOH A . C 2 HOH 59 1132 1132 HOH HOH A . C 2 HOH 60 1134 1134 HOH HOH A . C 2 HOH 61 1136 1136 HOH HOH A . C 2 HOH 62 1138 1138 HOH HOH A . C 2 HOH 63 1139 1139 HOH HOH A . C 2 HOH 64 1143 1143 HOH HOH A . C 2 HOH 65 1144 1144 HOH HOH A . C 2 HOH 66 1147 1147 HOH HOH A . C 2 HOH 67 1149 1149 HOH HOH A . C 2 HOH 68 1150 1150 HOH HOH A . C 2 HOH 69 1151 1151 HOH HOH A . C 2 HOH 70 1152 1152 HOH HOH A . C 2 HOH 71 1157 1157 HOH HOH A . C 2 HOH 72 1159 1159 HOH HOH A . C 2 HOH 73 1161 1161 HOH HOH A . C 2 HOH 74 1165 1165 HOH HOH A . C 2 HOH 75 1166 1166 HOH HOH A . C 2 HOH 76 1171 1171 HOH HOH A . C 2 HOH 77 1173 1173 HOH HOH A . C 2 HOH 78 1174 1174 HOH HOH A . C 2 HOH 79 1175 1175 HOH HOH A . C 2 HOH 80 1177 1177 HOH HOH A . C 2 HOH 81 1178 1178 HOH HOH A . C 2 HOH 82 1179 1179 HOH HOH A . C 2 HOH 83 1181 1181 HOH HOH A . C 2 HOH 84 1188 1188 HOH HOH A . C 2 HOH 85 1189 1189 HOH HOH A . C 2 HOH 86 1190 1190 HOH HOH A . C 2 HOH 87 1191 1191 HOH HOH A . C 2 HOH 88 1192 1192 HOH HOH A . C 2 HOH 89 1193 1193 HOH HOH A . C 2 HOH 90 1196 1196 HOH HOH A . C 2 HOH 91 1198 1198 HOH HOH A . C 2 HOH 92 1199 1199 HOH HOH A . C 2 HOH 93 1200 1200 HOH HOH A . C 2 HOH 94 1202 1202 HOH HOH A . C 2 HOH 95 1206 1206 HOH HOH A . C 2 HOH 96 1207 1207 HOH HOH A . C 2 HOH 97 1208 1208 HOH HOH A . C 2 HOH 98 1211 1211 HOH HOH A . C 2 HOH 99 1213 1213 HOH HOH A . C 2 HOH 100 1214 1214 HOH HOH A . C 2 HOH 101 1217 1217 HOH HOH A . C 2 HOH 102 1218 1218 HOH HOH A . C 2 HOH 103 1220 1220 HOH HOH A . C 2 HOH 104 1221 1221 HOH HOH A . D 2 HOH 1 1002 1002 HOH HOH B . D 2 HOH 2 1003 1003 HOH HOH B . D 2 HOH 3 1004 1004 HOH HOH B . D 2 HOH 4 1005 1005 HOH HOH B . D 2 HOH 5 1006 1006 HOH HOH B . D 2 HOH 6 1007 1007 HOH HOH B . D 2 HOH 7 1009 1009 HOH HOH B . D 2 HOH 8 1015 1015 HOH HOH B . D 2 HOH 9 1018 1018 HOH HOH B . D 2 HOH 10 1019 1019 HOH HOH B . D 2 HOH 11 1020 1020 HOH HOH B . D 2 HOH 12 1021 1021 HOH HOH B . D 2 HOH 13 1022 1022 HOH HOH B . D 2 HOH 14 1023 1023 HOH HOH B . D 2 HOH 15 1025 1025 HOH HOH B . D 2 HOH 16 1028 1028 HOH HOH B . D 2 HOH 17 1029 1029 HOH HOH B . D 2 HOH 18 1030 1030 HOH HOH B . D 2 HOH 19 1033 1033 HOH HOH B . D 2 HOH 20 1034 1034 HOH HOH B . D 2 HOH 21 1035 1035 HOH HOH B . D 2 HOH 22 1037 1037 HOH HOH B . D 2 HOH 23 1039 1039 HOH HOH B . D 2 HOH 24 1041 1041 HOH HOH B . D 2 HOH 25 1043 1043 HOH HOH B . D 2 HOH 26 1044 1044 HOH HOH B . D 2 HOH 27 1045 1045 HOH HOH B . D 2 HOH 28 1046 1046 HOH HOH B . D 2 HOH 29 1047 1047 HOH HOH B . D 2 HOH 30 1049 1049 HOH HOH B . D 2 HOH 31 1051 1051 HOH HOH B . D 2 HOH 32 1054 1054 HOH HOH B . D 2 HOH 33 1055 1055 HOH HOH B . D 2 HOH 34 1056 1056 HOH HOH B . D 2 HOH 35 1060 1060 HOH HOH B . D 2 HOH 36 1061 1061 HOH HOH B . D 2 HOH 37 1062 1062 HOH HOH B . D 2 HOH 38 1063 1063 HOH HOH B . D 2 HOH 39 1064 1064 HOH HOH B . D 2 HOH 40 1065 1065 HOH HOH B . D 2 HOH 41 1070 1070 HOH HOH B . D 2 HOH 42 1071 1071 HOH HOH B . D 2 HOH 43 1073 1073 HOH HOH B . D 2 HOH 44 1074 1074 HOH HOH B . D 2 HOH 45 1076 1076 HOH HOH B . D 2 HOH 46 1077 1077 HOH HOH B . D 2 HOH 47 1080 1080 HOH HOH B . D 2 HOH 48 1081 1081 HOH HOH B . D 2 HOH 49 1088 1088 HOH HOH B . D 2 HOH 50 1089 1089 HOH HOH B . D 2 HOH 51 1090 1090 HOH HOH B . D 2 HOH 52 1091 1091 HOH HOH B . D 2 HOH 53 1093 1093 HOH HOH B . D 2 HOH 54 1094 1094 HOH HOH B . D 2 HOH 55 1095 1095 HOH HOH B . D 2 HOH 56 1098 1098 HOH HOH B . D 2 HOH 57 1100 1100 HOH HOH B . D 2 HOH 58 1102 1102 HOH HOH B . D 2 HOH 59 1103 1103 HOH HOH B . D 2 HOH 60 1105 1105 HOH HOH B . D 2 HOH 61 1106 1106 HOH HOH B . D 2 HOH 62 1108 1108 HOH HOH B . D 2 HOH 63 1110 1110 HOH HOH B . D 2 HOH 64 1111 1111 HOH HOH B . D 2 HOH 65 1115 1115 HOH HOH B . D 2 HOH 66 1117 1117 HOH HOH B . D 2 HOH 67 1120 1120 HOH HOH B . D 2 HOH 68 1121 1121 HOH HOH B . D 2 HOH 69 1123 1123 HOH HOH B . D 2 HOH 70 1125 1125 HOH HOH B . D 2 HOH 71 1126 1126 HOH HOH B . D 2 HOH 72 1128 1128 HOH HOH B . D 2 HOH 73 1129 1129 HOH HOH B . D 2 HOH 74 1133 1133 HOH HOH B . D 2 HOH 75 1135 1135 HOH HOH B . D 2 HOH 76 1137 1137 HOH HOH B . D 2 HOH 77 1140 1140 HOH HOH B . D 2 HOH 78 1141 1141 HOH HOH B . D 2 HOH 79 1142 1142 HOH HOH B . D 2 HOH 80 1145 1145 HOH HOH B . D 2 HOH 81 1146 1146 HOH HOH B . D 2 HOH 82 1148 1148 HOH HOH B . D 2 HOH 83 1153 1153 HOH HOH B . D 2 HOH 84 1154 1154 HOH HOH B . D 2 HOH 85 1155 1155 HOH HOH B . D 2 HOH 86 1156 1156 HOH HOH B . D 2 HOH 87 1158 1158 HOH HOH B . D 2 HOH 88 1160 1160 HOH HOH B . D 2 HOH 89 1162 1162 HOH HOH B . D 2 HOH 90 1163 1163 HOH HOH B . D 2 HOH 91 1164 1164 HOH HOH B . D 2 HOH 92 1167 1167 HOH HOH B . D 2 HOH 93 1168 1168 HOH HOH B . D 2 HOH 94 1169 1169 HOH HOH B . D 2 HOH 95 1170 1170 HOH HOH B . D 2 HOH 96 1172 1172 HOH HOH B . D 2 HOH 97 1176 1176 HOH HOH B . D 2 HOH 98 1180 1180 HOH HOH B . D 2 HOH 99 1182 1182 HOH HOH B . D 2 HOH 100 1183 1183 HOH HOH B . D 2 HOH 101 1184 1184 HOH HOH B . D 2 HOH 102 1185 1185 HOH HOH B . D 2 HOH 103 1186 1186 HOH HOH B . D 2 HOH 104 1187 1187 HOH HOH B . D 2 HOH 105 1194 1194 HOH HOH B . D 2 HOH 106 1195 1195 HOH HOH B . D 2 HOH 107 1197 1197 HOH HOH B . D 2 HOH 108 1201 1201 HOH HOH B . D 2 HOH 109 1203 1203 HOH HOH B . D 2 HOH 110 1204 1204 HOH HOH B . D 2 HOH 111 1205 1205 HOH HOH B . D 2 HOH 112 1209 1209 HOH HOH B . D 2 HOH 113 1210 1210 HOH HOH B . D 2 HOH 114 1212 1212 HOH HOH B . D 2 HOH 115 1215 1215 HOH HOH B . D 2 HOH 116 1216 1216 HOH HOH B . D 2 HOH 117 1219 1219 HOH HOH B . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.0 ? 1 HKL-2000 'data reduction' . ? 2 HKL-2000 'data scaling' . ? 3 CNS phasing . ? 4 # _cell.entry_id 1R77 _cell.length_a 45.199 _cell.length_b 58.521 _cell.length_c 85.081 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1R77 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # _exptl.entry_id 1R77 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 4 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.39 _exptl_crystal.density_percent_sol 48.58 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 297 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details 'PEG 3350, sodium acetate, MES pH 6.5 or HEPES pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 297K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _diffrn.id _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.crystal_id 1 100 ? 1 2 ? ? 1 # loop_ _diffrn_detector.diffrn_id _diffrn_detector.detector _diffrn_detector.type _diffrn_detector.pdbx_collection_date _diffrn_detector.details 1 CCD MARRESEARCH 2001-06-30 ? 2 CCD MARRESEARCH 2000-08-18 ? # loop_ _diffrn_radiation.diffrn_id _diffrn_radiation.wavelength_id _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.monochromator _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.pdbx_scattering_type 1 1 M 'Si (111)' MAD x-ray 2 1 M 'Si (111)' 'SINGLE WAVELENGTH' x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.97931 1.0 2 0.97917 1.0 3 0.95370 1.0 4 1.000 1.0 # loop_ _diffrn_source.diffrn_id _diffrn_source.source _diffrn_source.type _diffrn_source.pdbx_synchrotron_site _diffrn_source.pdbx_synchrotron_beamline _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_wavelength_list 1 SYNCHROTRON 'APS BEAMLINE 17-ID' APS 17-ID ? '0.97931, 0.97917, 0.95370' 2 SYNCHROTRON 'APS BEAMLINE 17-ID' APS 17-ID 1.000 ? # _reflns.entry_id 1R77 _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F 2.0 _reflns.d_resolution_low 20 _reflns.d_resolution_high 1.75 _reflns.number_obs 22012 _reflns.number_all 23430 _reflns.percent_possible_obs 93.9 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 13.5 _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1,2 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.75 _reflns_shell.d_res_low 1.81 _reflns_shell.percent_possible_all 98.9 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1R77 _refine.ls_number_reflns_obs 22012 _refine.ls_number_reflns_all 23430 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 250222.27 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 17.5 _refine.ls_d_res_high 1.75 _refine.ls_percent_reflns_obs 94.6 _refine.ls_R_factor_obs 0.202 _refine.ls_R_factor_all 0.202 _refine.ls_R_factor_R_work 0.202 _refine.ls_R_factor_R_free 0.232 _refine.ls_R_factor_R_free_error 0.007 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.9 _refine.ls_number_reflns_R_free 1073 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 19.5 _refine.aniso_B[1][1] -0.33 _refine.aniso_B[2][2] 4.28 _refine.aniso_B[3][3] -3.95 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.389424 _refine.solvent_model_param_bsol 53.2203 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'N-terminus truncated SeMet MAD structure' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1R77 _refine_analyze.Luzzati_coordinate_error_obs 0.20 _refine_analyze.Luzzati_sigma_a_obs 0.12 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.24 _refine_analyze.Luzzati_sigma_a_free 0.12 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1621 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 221 _refine_hist.number_atoms_total 1842 _refine_hist.d_res_high 1.75 _refine_hist.d_res_low 17.5 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.006 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.2 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 25.8 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.67 ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.20 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 1.77 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 1.96 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 2.89 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 1.75 _refine_ls_shell.d_res_low 1.86 _refine_ls_shell.number_reflns_R_work 2974 _refine_ls_shell.R_factor_R_work 0.254 _refine_ls_shell.percent_reflns_obs 81.8 _refine_ls_shell.R_factor_R_free 0.289 _refine_ls_shell.R_factor_R_free_error 0.023 _refine_ls_shell.percent_reflns_R_free 4.9 _refine_ls_shell.number_reflns_R_free 153 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 WATER_REP.PARAM CBS_TOPPAR:WATER.TOP 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 1R77 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1R77 _struct.title 'Crystal structure of the cell wall targeting domain of peptidylglycan hydrolase ALE-1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1R77 _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'SH3b Domain, Cell Wall Targeting Domain, Lysostaphin, Peptidoglycan Hydrolase, Glycylglycine Endopeptidase, HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code ALE1_STACP _struct_ref.pdbx_db_accession O05156 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;YKTNKYGTLYKSESASFTANTDIITRLTGPFRSMPQSGVLRKGLTIKYDEVMKQDGHVWVGYNTNSGKRVYLPVRTWNES TGELGPLWGTIK ; _struct_ref.pdbx_align_begin 271 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1R77 A 12 ? 103 ? O05156 271 ? 362 ? 271 362 2 1 1R77 B 12 ? 103 ? O05156 271 ? 362 ? 271 362 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1R77 ASP A 1 ? UNP O05156 ? ? 'SEE REMARK 999' 260 1 1 1R77 TYR A 2 ? UNP O05156 ? ? 'SEE REMARK 999' 261 2 1 1R77 LYS A 3 ? UNP O05156 ? ? 'SEE REMARK 999' 262 3 1 1R77 ASP A 4 ? UNP O05156 ? ? 'SEE REMARK 999' 263 4 1 1R77 ASP A 5 ? UNP O05156 ? ? 'SEE REMARK 999' 264 5 1 1R77 ASP A 6 ? UNP O05156 ? ? 'SEE REMARK 999' 265 6 1 1R77 ASP A 7 ? UNP O05156 ? ? 'SEE REMARK 999' 266 7 1 1R77 LYS A 8 ? UNP O05156 ? ? 'SEE REMARK 999' 267 8 1 1R77 VAL A 9 ? UNP O05156 ? ? 'SEE REMARK 999' 268 9 1 1R77 LYS A 10 ? UNP O05156 ? ? 'SEE REMARK 999' 269 10 1 1R77 LEU A 11 ? UNP O05156 ? ? 'SEE REMARK 999' 270 11 2 1R77 ASP B 1 ? UNP O05156 ? ? 'SEE REMARK 999' 260 12 2 1R77 TYR B 2 ? UNP O05156 ? ? 'SEE REMARK 999' 261 13 2 1R77 LYS B 3 ? UNP O05156 ? ? 'SEE REMARK 999' 262 14 2 1R77 ASP B 4 ? UNP O05156 ? ? 'SEE REMARK 999' 263 15 2 1R77 ASP B 5 ? UNP O05156 ? ? 'SEE REMARK 999' 264 16 2 1R77 ASP B 6 ? UNP O05156 ? ? 'SEE REMARK 999' 265 17 2 1R77 ASP B 7 ? UNP O05156 ? ? 'SEE REMARK 999' 266 18 2 1R77 LYS B 8 ? UNP O05156 ? ? 'SEE REMARK 999' 267 19 2 1R77 VAL B 9 ? UNP O05156 ? ? 'SEE REMARK 999' 268 20 2 1R77 LYS B 10 ? UNP O05156 ? ? 'SEE REMARK 999' 269 21 2 1R77 LEU B 11 ? UNP O05156 ? ? 'SEE REMARK 999' 270 22 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C 2 1 B,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_biol.id _struct_biol.details _struct_biol.pdbx_parent_biol_id 1 ? ? 2 ? ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 5 ? VAL A 9 ? ASP A 264 VAL A 268 5 ? 5 HELX_P HELX_P2 2 ASP B 5 ? VAL B 9 ? ASP B 264 VAL B 268 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 3 ? C ? 2 ? D ? 5 ? E ? 3 ? F ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel D 4 5 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel F 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 13 ? THR A 14 ? LYS A 272 THR A 273 A 2 LEU A 20 ? ALA A 30 ? LEU A 279 ALA A 289 A 3 THR A 56 ? GLN A 65 ? THR A 315 GLN A 324 A 4 HIS A 68 ? ASN A 74 ? HIS A 327 ASN A 333 A 5 ARG A 80 ? THR A 87 ? ARG A 339 THR A 346 B 1 LYS A 13 ? THR A 14 ? LYS A 272 THR A 273 B 2 LEU A 20 ? ALA A 30 ? LEU A 279 ALA A 289 B 3 GLY A 100 ? LYS A 103 ? GLY A 359 LYS A 362 C 1 ILE A 34 ? ARG A 37 ? ILE A 293 ARG A 296 C 2 GLN A 47 ? LEU A 51 ? GLN A 306 LEU A 310 D 1 LYS B 13 ? THR B 14 ? LYS B 272 THR B 273 D 2 LEU B 20 ? ALA B 30 ? LEU B 279 ALA B 289 D 3 THR B 56 ? GLN B 65 ? THR B 315 GLN B 324 D 4 HIS B 68 ? ASN B 74 ? HIS B 327 ASN B 333 D 5 ARG B 80 ? THR B 87 ? ARG B 339 THR B 346 E 1 LYS B 13 ? THR B 14 ? LYS B 272 THR B 273 E 2 LEU B 20 ? ALA B 30 ? LEU B 279 ALA B 289 E 3 GLY B 100 ? ILE B 102 ? GLY B 359 ILE B 361 F 1 ILE B 34 ? ARG B 37 ? ILE B 293 ARG B 296 F 2 GLN B 47 ? LEU B 51 ? GLN B 306 LEU B 310 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LYS A 13 ? N LYS A 272 O TYR A 21 ? O TYR A 280 A 2 3 N LEU A 20 ? N LEU A 279 O LYS A 64 ? O LYS A 323 A 3 4 N MET A 63 ? N MET A 322 O TRP A 70 ? O TRP A 329 A 4 5 N TYR A 73 ? N TYR A 332 O VAL A 81 ? O VAL A 340 B 1 2 N LYS A 13 ? N LYS A 272 O TYR A 21 ? O TYR A 280 B 2 3 N THR A 29 ? N THR A 288 O THR A 101 ? O THR A 360 C 1 2 N ILE A 34 ? N ILE A 293 O LEU A 51 ? O LEU A 310 D 1 2 N LYS B 13 ? N LYS B 272 O TYR B 21 ? O TYR B 280 D 2 3 N PHE B 28 ? N PHE B 287 O ILE B 57 ? O ILE B 316 D 3 4 N MET B 63 ? N MET B 322 O TRP B 70 ? O TRP B 329 D 4 5 N TYR B 73 ? N TYR B 332 O VAL B 81 ? O VAL B 340 E 1 2 N LYS B 13 ? N LYS B 272 O TYR B 21 ? O TYR B 280 E 2 3 N THR B 29 ? N THR B 288 O THR B 101 ? O THR B 360 F 1 2 N ILE B 34 ? N ILE B 293 O LEU B 51 ? O LEU B 310 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 298 ? ? 63.36 -42.85 2 1 THR A 351 ? ? -146.97 -21.10 3 1 TRP A 358 ? ? -86.93 43.42 4 1 THR B 298 ? ? 68.39 -54.30 5 1 TRP B 358 ? ? -84.87 44.61 # _pdbx_database_remark.id 999 _pdbx_database_remark.text ;SEQUENCE FLAG-tag was added to the N-terminus ; # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ASP 260 ? A ASP 1 2 1 Y 1 A TYR 261 ? A TYR 2 3 1 Y 1 A LYS 262 ? A LYS 3 4 1 Y 1 A ASP 263 ? A ASP 4 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 ILE N N N N 147 ILE CA C N S 148 ILE C C N N 149 ILE O O N N 150 ILE CB C N S 151 ILE CG1 C N N 152 ILE CG2 C N N 153 ILE CD1 C N N 154 ILE OXT O N N 155 ILE H H N N 156 ILE H2 H N N 157 ILE HA H N N 158 ILE HB H N N 159 ILE HG12 H N N 160 ILE HG13 H N N 161 ILE HG21 H N N 162 ILE HG22 H N N 163 ILE HG23 H N N 164 ILE HD11 H N N 165 ILE HD12 H N N 166 ILE HD13 H N N 167 ILE HXT H N N 168 LEU N N N N 169 LEU CA C N S 170 LEU C C N N 171 LEU O O N N 172 LEU CB C N N 173 LEU CG C N N 174 LEU CD1 C N N 175 LEU CD2 C N N 176 LEU OXT O N N 177 LEU H H N N 178 LEU H2 H N N 179 LEU HA H N N 180 LEU HB2 H N N 181 LEU HB3 H N N 182 LEU HG H N N 183 LEU HD11 H N N 184 LEU HD12 H N N 185 LEU HD13 H N N 186 LEU HD21 H N N 187 LEU HD22 H N N 188 LEU HD23 H N N 189 LEU HXT H N N 190 LYS N N N N 191 LYS CA C N S 192 LYS C C N N 193 LYS O O N N 194 LYS CB C N N 195 LYS CG C N N 196 LYS CD C N N 197 LYS CE C N N 198 LYS NZ N N N 199 LYS OXT O N N 200 LYS H H N N 201 LYS H2 H N N 202 LYS HA H N N 203 LYS HB2 H N N 204 LYS HB3 H N N 205 LYS HG2 H N N 206 LYS HG3 H N N 207 LYS HD2 H N N 208 LYS HD3 H N N 209 LYS HE2 H N N 210 LYS HE3 H N N 211 LYS HZ1 H N N 212 LYS HZ2 H N N 213 LYS HZ3 H N N 214 LYS HXT H N N 215 MET N N N N 216 MET CA C N S 217 MET C C N N 218 MET O O N N 219 MET CB C N N 220 MET CG C N N 221 MET SD S N N 222 MET CE C N N 223 MET OXT O N N 224 MET H H N N 225 MET H2 H N N 226 MET HA H N N 227 MET HB2 H N N 228 MET HB3 H N N 229 MET HG2 H N N 230 MET HG3 H N N 231 MET HE1 H N N 232 MET HE2 H N N 233 MET HE3 H N N 234 MET HXT H N N 235 PHE N N N N 236 PHE CA C N S 237 PHE C C N N 238 PHE O O N N 239 PHE CB C N N 240 PHE CG C Y N 241 PHE CD1 C Y N 242 PHE CD2 C Y N 243 PHE CE1 C Y N 244 PHE CE2 C Y N 245 PHE CZ C Y N 246 PHE OXT O N N 247 PHE H H N N 248 PHE H2 H N N 249 PHE HA H N N 250 PHE HB2 H N N 251 PHE HB3 H N N 252 PHE HD1 H N N 253 PHE HD2 H N N 254 PHE HE1 H N N 255 PHE HE2 H N N 256 PHE HZ H N N 257 PHE HXT H N N 258 PRO N N N N 259 PRO CA C N S 260 PRO C C N N 261 PRO O O N N 262 PRO CB C N N 263 PRO CG C N N 264 PRO CD C N N 265 PRO OXT O N N 266 PRO H H N N 267 PRO HA H N N 268 PRO HB2 H N N 269 PRO HB3 H N N 270 PRO HG2 H N N 271 PRO HG3 H N N 272 PRO HD2 H N N 273 PRO HD3 H N N 274 PRO HXT H N N 275 SER N N N N 276 SER CA C N S 277 SER C C N N 278 SER O O N N 279 SER CB C N N 280 SER OG O N N 281 SER OXT O N N 282 SER H H N N 283 SER H2 H N N 284 SER HA H N N 285 SER HB2 H N N 286 SER HB3 H N N 287 SER HG H N N 288 SER HXT H N N 289 THR N N N N 290 THR CA C N S 291 THR C C N N 292 THR O O N N 293 THR CB C N R 294 THR OG1 O N N 295 THR CG2 C N N 296 THR OXT O N N 297 THR H H N N 298 THR H2 H N N 299 THR HA H N N 300 THR HB H N N 301 THR HG1 H N N 302 THR HG21 H N N 303 THR HG22 H N N 304 THR HG23 H N N 305 THR HXT H N N 306 TRP N N N N 307 TRP CA C N S 308 TRP C C N N 309 TRP O O N N 310 TRP CB C N N 311 TRP CG C Y N 312 TRP CD1 C Y N 313 TRP CD2 C Y N 314 TRP NE1 N Y N 315 TRP CE2 C Y N 316 TRP CE3 C Y N 317 TRP CZ2 C Y N 318 TRP CZ3 C Y N 319 TRP CH2 C Y N 320 TRP OXT O N N 321 TRP H H N N 322 TRP H2 H N N 323 TRP HA H N N 324 TRP HB2 H N N 325 TRP HB3 H N N 326 TRP HD1 H N N 327 TRP HE1 H N N 328 TRP HE3 H N N 329 TRP HZ2 H N N 330 TRP HZ3 H N N 331 TRP HH2 H N N 332 TRP HXT H N N 333 TYR N N N N 334 TYR CA C N S 335 TYR C C N N 336 TYR O O N N 337 TYR CB C N N 338 TYR CG C Y N 339 TYR CD1 C Y N 340 TYR CD2 C Y N 341 TYR CE1 C Y N 342 TYR CE2 C Y N 343 TYR CZ C Y N 344 TYR OH O N N 345 TYR OXT O N N 346 TYR H H N N 347 TYR H2 H N N 348 TYR HA H N N 349 TYR HB2 H N N 350 TYR HB3 H N N 351 TYR HD1 H N N 352 TYR HD2 H N N 353 TYR HE1 H N N 354 TYR HE2 H N N 355 TYR HH H N N 356 TYR HXT H N N 357 VAL N N N N 358 VAL CA C N S 359 VAL C C N N 360 VAL O O N N 361 VAL CB C N N 362 VAL CG1 C N N 363 VAL CG2 C N N 364 VAL OXT O N N 365 VAL H H N N 366 VAL H2 H N N 367 VAL HA H N N 368 VAL HB H N N 369 VAL HG11 H N N 370 VAL HG12 H N N 371 VAL HG13 H N N 372 VAL HG21 H N N 373 VAL HG22 H N N 374 VAL HG23 H N N 375 VAL HXT H N N 376 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 HOH O H1 sing N N 137 HOH O H2 sing N N 138 ILE N CA sing N N 139 ILE N H sing N N 140 ILE N H2 sing N N 141 ILE CA C sing N N 142 ILE CA CB sing N N 143 ILE CA HA sing N N 144 ILE C O doub N N 145 ILE C OXT sing N N 146 ILE CB CG1 sing N N 147 ILE CB CG2 sing N N 148 ILE CB HB sing N N 149 ILE CG1 CD1 sing N N 150 ILE CG1 HG12 sing N N 151 ILE CG1 HG13 sing N N 152 ILE CG2 HG21 sing N N 153 ILE CG2 HG22 sing N N 154 ILE CG2 HG23 sing N N 155 ILE CD1 HD11 sing N N 156 ILE CD1 HD12 sing N N 157 ILE CD1 HD13 sing N N 158 ILE OXT HXT sing N N 159 LEU N CA sing N N 160 LEU N H sing N N 161 LEU N H2 sing N N 162 LEU CA C sing N N 163 LEU CA CB sing N N 164 LEU CA HA sing N N 165 LEU C O doub N N 166 LEU C OXT sing N N 167 LEU CB CG sing N N 168 LEU CB HB2 sing N N 169 LEU CB HB3 sing N N 170 LEU CG CD1 sing N N 171 LEU CG CD2 sing N N 172 LEU CG HG sing N N 173 LEU CD1 HD11 sing N N 174 LEU CD1 HD12 sing N N 175 LEU CD1 HD13 sing N N 176 LEU CD2 HD21 sing N N 177 LEU CD2 HD22 sing N N 178 LEU CD2 HD23 sing N N 179 LEU OXT HXT sing N N 180 LYS N CA sing N N 181 LYS N H sing N N 182 LYS N H2 sing N N 183 LYS CA C sing N N 184 LYS CA CB sing N N 185 LYS CA HA sing N N 186 LYS C O doub N N 187 LYS C OXT sing N N 188 LYS CB CG sing N N 189 LYS CB HB2 sing N N 190 LYS CB HB3 sing N N 191 LYS CG CD sing N N 192 LYS CG HG2 sing N N 193 LYS CG HG3 sing N N 194 LYS CD CE sing N N 195 LYS CD HD2 sing N N 196 LYS CD HD3 sing N N 197 LYS CE NZ sing N N 198 LYS CE HE2 sing N N 199 LYS CE HE3 sing N N 200 LYS NZ HZ1 sing N N 201 LYS NZ HZ2 sing N N 202 LYS NZ HZ3 sing N N 203 LYS OXT HXT sing N N 204 MET N CA sing N N 205 MET N H sing N N 206 MET N H2 sing N N 207 MET CA C sing N N 208 MET CA CB sing N N 209 MET CA HA sing N N 210 MET C O doub N N 211 MET C OXT sing N N 212 MET CB CG sing N N 213 MET CB HB2 sing N N 214 MET CB HB3 sing N N 215 MET CG SD sing N N 216 MET CG HG2 sing N N 217 MET CG HG3 sing N N 218 MET SD CE sing N N 219 MET CE HE1 sing N N 220 MET CE HE2 sing N N 221 MET CE HE3 sing N N 222 MET OXT HXT sing N N 223 PHE N CA sing N N 224 PHE N H sing N N 225 PHE N H2 sing N N 226 PHE CA C sing N N 227 PHE CA CB sing N N 228 PHE CA HA sing N N 229 PHE C O doub N N 230 PHE C OXT sing N N 231 PHE CB CG sing N N 232 PHE CB HB2 sing N N 233 PHE CB HB3 sing N N 234 PHE CG CD1 doub Y N 235 PHE CG CD2 sing Y N 236 PHE CD1 CE1 sing Y N 237 PHE CD1 HD1 sing N N 238 PHE CD2 CE2 doub Y N 239 PHE CD2 HD2 sing N N 240 PHE CE1 CZ doub Y N 241 PHE CE1 HE1 sing N N 242 PHE CE2 CZ sing Y N 243 PHE CE2 HE2 sing N N 244 PHE CZ HZ sing N N 245 PHE OXT HXT sing N N 246 PRO N CA sing N N 247 PRO N CD sing N N 248 PRO N H sing N N 249 PRO CA C sing N N 250 PRO CA CB sing N N 251 PRO CA HA sing N N 252 PRO C O doub N N 253 PRO C OXT sing N N 254 PRO CB CG sing N N 255 PRO CB HB2 sing N N 256 PRO CB HB3 sing N N 257 PRO CG CD sing N N 258 PRO CG HG2 sing N N 259 PRO CG HG3 sing N N 260 PRO CD HD2 sing N N 261 PRO CD HD3 sing N N 262 PRO OXT HXT sing N N 263 SER N CA sing N N 264 SER N H sing N N 265 SER N H2 sing N N 266 SER CA C sing N N 267 SER CA CB sing N N 268 SER CA HA sing N N 269 SER C O doub N N 270 SER C OXT sing N N 271 SER CB OG sing N N 272 SER CB HB2 sing N N 273 SER CB HB3 sing N N 274 SER OG HG sing N N 275 SER OXT HXT sing N N 276 THR N CA sing N N 277 THR N H sing N N 278 THR N H2 sing N N 279 THR CA C sing N N 280 THR CA CB sing N N 281 THR CA HA sing N N 282 THR C O doub N N 283 THR C OXT sing N N 284 THR CB OG1 sing N N 285 THR CB CG2 sing N N 286 THR CB HB sing N N 287 THR OG1 HG1 sing N N 288 THR CG2 HG21 sing N N 289 THR CG2 HG22 sing N N 290 THR CG2 HG23 sing N N 291 THR OXT HXT sing N N 292 TRP N CA sing N N 293 TRP N H sing N N 294 TRP N H2 sing N N 295 TRP CA C sing N N 296 TRP CA CB sing N N 297 TRP CA HA sing N N 298 TRP C O doub N N 299 TRP C OXT sing N N 300 TRP CB CG sing N N 301 TRP CB HB2 sing N N 302 TRP CB HB3 sing N N 303 TRP CG CD1 doub Y N 304 TRP CG CD2 sing Y N 305 TRP CD1 NE1 sing Y N 306 TRP CD1 HD1 sing N N 307 TRP CD2 CE2 doub Y N 308 TRP CD2 CE3 sing Y N 309 TRP NE1 CE2 sing Y N 310 TRP NE1 HE1 sing N N 311 TRP CE2 CZ2 sing Y N 312 TRP CE3 CZ3 doub Y N 313 TRP CE3 HE3 sing N N 314 TRP CZ2 CH2 doub Y N 315 TRP CZ2 HZ2 sing N N 316 TRP CZ3 CH2 sing Y N 317 TRP CZ3 HZ3 sing N N 318 TRP CH2 HH2 sing N N 319 TRP OXT HXT sing N N 320 TYR N CA sing N N 321 TYR N H sing N N 322 TYR N H2 sing N N 323 TYR CA C sing N N 324 TYR CA CB sing N N 325 TYR CA HA sing N N 326 TYR C O doub N N 327 TYR C OXT sing N N 328 TYR CB CG sing N N 329 TYR CB HB2 sing N N 330 TYR CB HB3 sing N N 331 TYR CG CD1 doub Y N 332 TYR CG CD2 sing Y N 333 TYR CD1 CE1 sing Y N 334 TYR CD1 HD1 sing N N 335 TYR CD2 CE2 doub Y N 336 TYR CD2 HD2 sing N N 337 TYR CE1 CZ doub Y N 338 TYR CE1 HE1 sing N N 339 TYR CE2 CZ sing Y N 340 TYR CE2 HE2 sing N N 341 TYR CZ OH sing N N 342 TYR OH HH sing N N 343 TYR OXT HXT sing N N 344 VAL N CA sing N N 345 VAL N H sing N N 346 VAL N H2 sing N N 347 VAL CA C sing N N 348 VAL CA CB sing N N 349 VAL CA HA sing N N 350 VAL C O doub N N 351 VAL C OXT sing N N 352 VAL CB CG1 sing N N 353 VAL CB CG2 sing N N 354 VAL CB HB sing N N 355 VAL CG1 HG11 sing N N 356 VAL CG1 HG12 sing N N 357 VAL CG1 HG13 sing N N 358 VAL CG2 HG21 sing N N 359 VAL CG2 HG22 sing N N 360 VAL CG2 HG23 sing N N 361 VAL OXT HXT sing N N 362 # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name Other _pdbx_initial_refinement_model.details 'N-terminus truncated SeMet MAD structure' # _atom_sites.entry_id 1R77 _atom_sites.fract_transf_matrix[1][1] 0.022124 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017088 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011754 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_