data_1RH6 # _entry.id 1RH6 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.386 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1RH6 pdb_00001rh6 10.2210/pdb1rh6/pdb NDB PD0494 ? ? RCSB RCSB020742 ? ? WWPDB D_1000020742 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-06-29 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2012-05-09 5 'Structure model' 1 4 2021-10-27 6 'Structure model' 1 5 2024-02-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Derived calculations' 4 5 'Structure model' Advisory 5 5 'Structure model' 'Database references' 6 6 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' database_2 2 5 'Structure model' pdbx_validate_close_contact 3 5 'Structure model' struct_ref_seq_dif 4 6 'Structure model' chem_comp_atom 5 6 'Structure model' chem_comp_bond # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_pdbx_validate_close_contact.auth_asym_id_1' 4 5 'Structure model' '_pdbx_validate_close_contact.auth_asym_id_2' 5 5 'Structure model' '_pdbx_validate_close_contact.auth_seq_id_1' 6 5 'Structure model' '_pdbx_validate_close_contact.auth_seq_id_2' 7 5 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1RH6 _pdbx_database_status.recvd_initial_deposition_date 2003-11-13 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Sam, M.D.' 1 'Cascio, D.' 2 'Johnson, R.C.' 3 'Clubb, R.T.' 4 # _citation.id primary _citation.title 'Crystal structure of the excisionase-DNA complex from bacteriophage lambda.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 338 _citation.page_first 229 _citation.page_last 240 _citation.year 2004 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15066428 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2004.02.053 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Sam, M.D.' 1 ? primary 'Cascio, D.' 2 ? primary 'Johnson, R.C.' 3 ? primary 'Clubb, R.T.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*CP*TP*AP*TP*GP*TP*AP*GP*TP*CP*TP*GP*TP*TP*G)-3'" 4605.992 1 ? ? ? ? 2 polymer syn "5'-D(P*CP*AP*AP*CP*AP*GP*AP*CP*TP*AP*CP*AP*TP*AP*G)-3'" 4571.015 1 ? ? ? ? 3 polymer man Excisionase 6793.799 2 ? C28S 'Xis DBD (residues 1-55)' ? 4 water nat water 18.015 152 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DC)(DT)(DA)(DT)(DG)(DT)(DA)(DG)(DT)(DC)(DT)(DG)(DT)(DT)(DG)' CTATGTAGTCTGTTG C ? 2 polydeoxyribonucleotide no no '(DC)(DA)(DA)(DC)(DA)(DG)(DA)(DC)(DT)(DA)(DC)(DA)(DT)(DA)(DG)' CAACAGACTACATAG D ? 3 'polypeptide(L)' no no MYLTLQEWNARQRRPRSLETVRRWVRESRIFPPPVKDGREYLFHESAVKVDLNRP MYLTLQEWNARQRRPRSLETVRRWVRESRIFPPPVKDGREYLFHESAVKVDLNRP A,B ? # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DT n 1 3 DA n 1 4 DT n 1 5 DG n 1 6 DT n 1 7 DA n 1 8 DG n 1 9 DT n 1 10 DC n 1 11 DT n 1 12 DG n 1 13 DT n 1 14 DT n 1 15 DG n 2 1 DC n 2 2 DA n 2 3 DA n 2 4 DC n 2 5 DA n 2 6 DG n 2 7 DA n 2 8 DC n 2 9 DT n 2 10 DA n 2 11 DC n 2 12 DA n 2 13 DT n 2 14 DA n 2 15 DG n 3 1 MET n 3 2 TYR n 3 3 LEU n 3 4 THR n 3 5 LEU n 3 6 GLN n 3 7 GLU n 3 8 TRP n 3 9 ASN n 3 10 ALA n 3 11 ARG n 3 12 GLN n 3 13 ARG n 3 14 ARG n 3 15 PRO n 3 16 ARG n 3 17 SER n 3 18 LEU n 3 19 GLU n 3 20 THR n 3 21 VAL n 3 22 ARG n 3 23 ARG n 3 24 TRP n 3 25 VAL n 3 26 ARG n 3 27 GLU n 3 28 SER n 3 29 ARG n 3 30 ILE n 3 31 PHE n 3 32 PRO n 3 33 PRO n 3 34 PRO n 3 35 VAL n 3 36 LYS n 3 37 ASP n 3 38 GLY n 3 39 ARG n 3 40 GLU n 3 41 TYR n 3 42 LEU n 3 43 PHE n 3 44 HIS n 3 45 GLU n 3 46 SER n 3 47 ALA n 3 48 VAL n 3 49 LYS n 3 50 VAL n 3 51 ASP n 3 52 LEU n 3 53 ASN n 3 54 ARG n 3 55 PRO n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus 'Lambda-like viruses' _entity_src_gen.pdbx_gene_src_gene xis _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Enterobacteria phage lambda' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10710 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'RJ3386 (BL21-DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pet11a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 ? ? ? C . n A 1 2 DT 2 2 2 DT T C . n A 1 3 DA 3 3 3 DA A C . n A 1 4 DT 4 4 4 DT T C . n A 1 5 DG 5 5 5 DG G C . n A 1 6 DT 6 6 6 DT T C . n A 1 7 DA 7 7 7 DA A C . n A 1 8 DG 8 8 8 DG G C . n A 1 9 DT 9 9 9 DT T C . n A 1 10 DC 10 10 10 DC C C . n A 1 11 DT 11 11 11 DT T C . n A 1 12 DG 12 12 12 DG G C . n A 1 13 DT 13 13 13 DT T C . n A 1 14 DT 14 14 14 DT T C . n A 1 15 DG 15 15 15 DG G C . n B 2 1 DC 1 16 16 DC C D . n B 2 2 DA 2 17 17 DA A D . n B 2 3 DA 3 18 18 DA A D . n B 2 4 DC 4 19 19 DC C D . n B 2 5 DA 5 20 20 DA A D . n B 2 6 DG 6 21 21 DG G D . n B 2 7 DA 7 22 22 DA A D . n B 2 8 DC 8 23 23 DC C D . n B 2 9 DT 9 24 24 DT T D . n B 2 10 DA 10 25 25 DA A D . n B 2 11 DC 11 26 26 DC C D . n B 2 12 DA 12 27 27 DA A D . n B 2 13 DT 13 28 28 DT T D . n B 2 14 DA 14 29 29 DA A D . n B 2 15 DG 15 30 ? ? ? D . n C 3 1 MET 1 1 1 MET MET A . n C 3 2 TYR 2 2 2 TYR TYR A . n C 3 3 LEU 3 3 3 LEU LEU A . n C 3 4 THR 4 4 4 THR THR A . n C 3 5 LEU 5 5 5 LEU LEU A . n C 3 6 GLN 6 6 6 GLN GLN A . n C 3 7 GLU 7 7 7 GLU GLU A . n C 3 8 TRP 8 8 8 TRP TRP A . n C 3 9 ASN 9 9 9 ASN ASN A . n C 3 10 ALA 10 10 10 ALA ALA A . n C 3 11 ARG 11 11 11 ARG ARG A . n C 3 12 GLN 12 12 12 GLN GLN A . n C 3 13 ARG 13 13 13 ARG ARG A . n C 3 14 ARG 14 14 14 ARG ARG A . n C 3 15 PRO 15 15 15 PRO PRO A . n C 3 16 ARG 16 16 16 ARG ARG A . n C 3 17 SER 17 17 17 SER SER A . n C 3 18 LEU 18 18 18 LEU LEU A . n C 3 19 GLU 19 19 19 GLU GLU A . n C 3 20 THR 20 20 20 THR THR A . n C 3 21 VAL 21 21 21 VAL VAL A . n C 3 22 ARG 22 22 22 ARG ARG A . n C 3 23 ARG 23 23 23 ARG ARG A . n C 3 24 TRP 24 24 24 TRP TRP A . n C 3 25 VAL 25 25 25 VAL VAL A . n C 3 26 ARG 26 26 26 ARG ARG A . n C 3 27 GLU 27 27 27 GLU GLU A . n C 3 28 SER 28 28 28 SER SER A . n C 3 29 ARG 29 29 29 ARG ARG A . n C 3 30 ILE 30 30 30 ILE ILE A . n C 3 31 PHE 31 31 31 PHE PHE A . n C 3 32 PRO 32 32 32 PRO PRO A . n C 3 33 PRO 33 33 33 PRO PRO A . n C 3 34 PRO 34 34 34 PRO PRO A . n C 3 35 VAL 35 35 35 VAL VAL A . n C 3 36 LYS 36 36 36 LYS LYS A . n C 3 37 ASP 37 37 37 ASP ASP A . n C 3 38 GLY 38 38 38 GLY GLY A . n C 3 39 ARG 39 39 39 ARG ARG A . n C 3 40 GLU 40 40 40 GLU GLU A . n C 3 41 TYR 41 41 41 TYR TYR A . n C 3 42 LEU 42 42 42 LEU LEU A . n C 3 43 PHE 43 43 43 PHE PHE A . n C 3 44 HIS 44 44 44 HIS HIS A . n C 3 45 GLU 45 45 45 GLU GLU A . n C 3 46 SER 46 46 46 SER SER A . n C 3 47 ALA 47 47 47 ALA ALA A . n C 3 48 VAL 48 48 48 VAL VAL A . n C 3 49 LYS 49 49 49 LYS LYS A . n C 3 50 VAL 50 50 50 VAL VAL A . n C 3 51 ASP 51 51 51 ASP ASP A . n C 3 52 LEU 52 52 52 LEU LEU A . n C 3 53 ASN 53 53 53 ASN ASN A . n C 3 54 ARG 54 54 54 ARG ARG A . n C 3 55 PRO 55 55 55 PRO PRO A . n D 3 1 MET 1 1 1 MET MET B . n D 3 2 TYR 2 2 2 TYR TYR B . n D 3 3 LEU 3 3 3 LEU LEU B . n D 3 4 THR 4 4 4 THR THR B . n D 3 5 LEU 5 5 5 LEU LEU B . n D 3 6 GLN 6 6 6 GLN GLN B . n D 3 7 GLU 7 7 7 GLU GLU B . n D 3 8 TRP 8 8 8 TRP TRP B . n D 3 9 ASN 9 9 9 ASN ASN B . n D 3 10 ALA 10 10 10 ALA ALA B . n D 3 11 ARG 11 11 11 ARG ARG B . n D 3 12 GLN 12 12 12 GLN GLN B . n D 3 13 ARG 13 13 13 ARG ARG B . n D 3 14 ARG 14 14 14 ARG ARG B . n D 3 15 PRO 15 15 15 PRO PRO B . n D 3 16 ARG 16 16 16 ARG ARG B . n D 3 17 SER 17 17 17 SER SER B . n D 3 18 LEU 18 18 18 LEU LEU B . n D 3 19 GLU 19 19 19 GLU GLU B . n D 3 20 THR 20 20 20 THR THR B . n D 3 21 VAL 21 21 21 VAL VAL B . n D 3 22 ARG 22 22 22 ARG ARG B . n D 3 23 ARG 23 23 23 ARG ARG B . n D 3 24 TRP 24 24 24 TRP TRP B . n D 3 25 VAL 25 25 25 VAL VAL B . n D 3 26 ARG 26 26 26 ARG ARG B . n D 3 27 GLU 27 27 27 GLU GLU B . n D 3 28 SER 28 28 28 SER SER B . n D 3 29 ARG 29 29 29 ARG ARG B . n D 3 30 ILE 30 30 30 ILE ILE B . n D 3 31 PHE 31 31 31 PHE PHE B . n D 3 32 PRO 32 32 32 PRO PRO B . n D 3 33 PRO 33 33 33 PRO PRO B . n D 3 34 PRO 34 34 34 PRO PRO B . n D 3 35 VAL 35 35 35 VAL VAL B . n D 3 36 LYS 36 36 36 LYS LYS B . n D 3 37 ASP 37 37 37 ASP ASP B . n D 3 38 GLY 38 38 38 GLY GLY B . n D 3 39 ARG 39 39 39 ARG ARG B . n D 3 40 GLU 40 40 40 GLU GLU B . n D 3 41 TYR 41 41 41 TYR TYR B . n D 3 42 LEU 42 42 42 LEU LEU B . n D 3 43 PHE 43 43 43 PHE PHE B . n D 3 44 HIS 44 44 44 HIS HIS B . n D 3 45 GLU 45 45 45 GLU GLU B . n D 3 46 SER 46 46 46 SER SER B . n D 3 47 ALA 47 47 47 ALA ALA B . n D 3 48 VAL 48 48 48 VAL VAL B . n D 3 49 LYS 49 49 49 LYS LYS B . n D 3 50 VAL 50 50 50 VAL VAL B . n D 3 51 ASP 51 51 51 ASP ASP B . n D 3 52 LEU 52 52 52 LEU LEU B . n D 3 53 ASN 53 53 ? ? ? B . n D 3 54 ARG 54 54 ? ? ? B . n D 3 55 PRO 55 55 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 HOH 1 16 8 HOH HOH C . E 4 HOH 2 17 14 HOH HOH C . E 4 HOH 3 18 21 HOH HOH C . E 4 HOH 4 19 26 HOH HOH C . E 4 HOH 5 20 28 HOH HOH C . E 4 HOH 6 21 29 HOH HOH C . E 4 HOH 7 22 30 HOH HOH C . E 4 HOH 8 23 33 HOH HOH C . E 4 HOH 9 24 36 HOH HOH C . E 4 HOH 10 25 37 HOH HOH C . E 4 HOH 11 26 42 HOH HOH C . E 4 HOH 12 27 46 HOH HOH C . E 4 HOH 13 28 47 HOH HOH C . E 4 HOH 14 29 49 HOH HOH C . E 4 HOH 15 30 52 HOH HOH C . E 4 HOH 16 31 54 HOH HOH C . E 4 HOH 17 32 58 HOH HOH C . E 4 HOH 18 33 62 HOH HOH C . E 4 HOH 19 34 63 HOH HOH C . E 4 HOH 20 35 68 HOH HOH C . E 4 HOH 21 36 69 HOH HOH C . E 4 HOH 22 37 70 HOH HOH C . E 4 HOH 23 38 73 HOH HOH C . E 4 HOH 24 39 74 HOH HOH C . E 4 HOH 25 40 76 HOH HOH C . E 4 HOH 26 41 77 HOH HOH C . E 4 HOH 27 42 78 HOH HOH C . E 4 HOH 28 43 79 HOH HOH C . E 4 HOH 29 44 81 HOH HOH C . E 4 HOH 30 45 86 HOH HOH C . E 4 HOH 31 46 92 HOH HOH C . E 4 HOH 32 47 96 HOH HOH C . E 4 HOH 33 48 101 HOH HOH C . E 4 HOH 34 49 105 HOH HOH C . E 4 HOH 35 50 107 HOH HOH C . E 4 HOH 36 51 108 HOH HOH C . E 4 HOH 37 52 109 HOH HOH C . E 4 HOH 38 53 111 HOH HOH C . E 4 HOH 39 54 112 HOH HOH C . E 4 HOH 40 55 115 HOH HOH C . E 4 HOH 41 56 118 HOH HOH C . E 4 HOH 42 57 120 HOH HOH C . E 4 HOH 43 58 125 HOH HOH C . E 4 HOH 44 59 126 HOH HOH C . E 4 HOH 45 60 133 HOH HOH C . E 4 HOH 46 61 143 HOH HOH C . E 4 HOH 47 62 151 HOH HOH C . F 4 HOH 1 9 9 HOH HOH D . F 4 HOH 2 31 31 HOH HOH D . F 4 HOH 3 41 41 HOH HOH D . F 4 HOH 4 51 51 HOH HOH D . F 4 HOH 5 53 53 HOH HOH D . F 4 HOH 6 56 56 HOH HOH D . F 4 HOH 7 67 67 HOH HOH D . F 4 HOH 8 71 71 HOH HOH D . F 4 HOH 9 80 80 HOH HOH D . F 4 HOH 10 82 82 HOH HOH D . F 4 HOH 11 83 83 HOH HOH D . F 4 HOH 12 87 87 HOH HOH D . F 4 HOH 13 91 91 HOH HOH D . F 4 HOH 14 117 117 HOH HOH D . F 4 HOH 15 122 122 HOH HOH D . F 4 HOH 16 128 128 HOH HOH D . F 4 HOH 17 130 130 HOH HOH D . F 4 HOH 18 146 146 HOH HOH D . F 4 HOH 19 152 152 HOH HOH D . G 4 HOH 1 56 16 HOH HOH A . G 4 HOH 2 57 25 HOH HOH A . G 4 HOH 3 58 32 HOH HOH A . G 4 HOH 4 59 119 HOH HOH A . G 4 HOH 5 60 134 HOH HOH A . G 4 HOH 6 61 135 HOH HOH A . G 4 HOH 7 62 137 HOH HOH A . G 4 HOH 8 63 139 HOH HOH A . G 4 HOH 9 64 141 HOH HOH A . G 4 HOH 10 65 142 HOH HOH A . G 4 HOH 11 66 144 HOH HOH A . G 4 HOH 12 67 147 HOH HOH A . G 4 HOH 13 68 148 HOH HOH A . G 4 HOH 14 69 150 HOH HOH A . H 4 HOH 1 56 1 HOH HOH B . H 4 HOH 2 57 2 HOH HOH B . H 4 HOH 3 58 3 HOH HOH B . H 4 HOH 4 59 4 HOH HOH B . H 4 HOH 5 60 5 HOH HOH B . H 4 HOH 6 61 6 HOH HOH B . H 4 HOH 7 62 7 HOH HOH B . H 4 HOH 8 63 10 HOH HOH B . H 4 HOH 9 64 11 HOH HOH B . H 4 HOH 10 65 12 HOH HOH B . H 4 HOH 11 66 13 HOH HOH B . H 4 HOH 12 67 15 HOH HOH B . H 4 HOH 13 68 17 HOH HOH B . H 4 HOH 14 69 18 HOH HOH B . H 4 HOH 15 70 19 HOH HOH B . H 4 HOH 16 71 20 HOH HOH B . H 4 HOH 17 72 22 HOH HOH B . H 4 HOH 18 73 23 HOH HOH B . H 4 HOH 19 74 24 HOH HOH B . H 4 HOH 20 75 27 HOH HOH B . H 4 HOH 21 76 34 HOH HOH B . H 4 HOH 22 77 35 HOH HOH B . H 4 HOH 23 78 38 HOH HOH B . H 4 HOH 24 79 39 HOH HOH B . H 4 HOH 25 80 40 HOH HOH B . H 4 HOH 26 81 43 HOH HOH B . H 4 HOH 27 82 44 HOH HOH B . H 4 HOH 28 83 45 HOH HOH B . H 4 HOH 29 84 48 HOH HOH B . H 4 HOH 30 85 50 HOH HOH B . H 4 HOH 31 86 55 HOH HOH B . H 4 HOH 32 87 57 HOH HOH B . H 4 HOH 33 88 59 HOH HOH B . H 4 HOH 34 89 60 HOH HOH B . H 4 HOH 35 90 61 HOH HOH B . H 4 HOH 36 91 64 HOH HOH B . H 4 HOH 37 92 65 HOH HOH B . H 4 HOH 38 93 66 HOH HOH B . H 4 HOH 39 94 72 HOH HOH B . H 4 HOH 40 95 75 HOH HOH B . H 4 HOH 41 96 84 HOH HOH B . H 4 HOH 42 97 85 HOH HOH B . H 4 HOH 43 98 88 HOH HOH B . H 4 HOH 44 99 89 HOH HOH B . H 4 HOH 45 100 90 HOH HOH B . H 4 HOH 46 101 93 HOH HOH B . H 4 HOH 47 102 94 HOH HOH B . H 4 HOH 48 103 95 HOH HOH B . H 4 HOH 49 104 97 HOH HOH B . H 4 HOH 50 105 98 HOH HOH B . H 4 HOH 51 106 99 HOH HOH B . H 4 HOH 52 107 100 HOH HOH B . H 4 HOH 53 108 102 HOH HOH B . H 4 HOH 54 109 103 HOH HOH B . H 4 HOH 55 110 104 HOH HOH B . H 4 HOH 56 111 106 HOH HOH B . H 4 HOH 57 112 110 HOH HOH B . H 4 HOH 58 113 113 HOH HOH B . H 4 HOH 59 114 114 HOH HOH B . H 4 HOH 60 115 116 HOH HOH B . H 4 HOH 61 116 121 HOH HOH B . H 4 HOH 62 117 123 HOH HOH B . H 4 HOH 63 118 124 HOH HOH B . H 4 HOH 64 119 127 HOH HOH B . H 4 HOH 65 120 129 HOH HOH B . H 4 HOH 66 121 131 HOH HOH B . H 4 HOH 67 122 132 HOH HOH B . H 4 HOH 68 123 136 HOH HOH B . H 4 HOH 69 124 138 HOH HOH B . H 4 HOH 70 125 140 HOH HOH B . H 4 HOH 71 126 145 HOH HOH B . H 4 HOH 72 127 149 HOH HOH B . # _pdbx_unobs_or_zero_occ_atoms.id 1 _pdbx_unobs_or_zero_occ_atoms.PDB_model_num 1 _pdbx_unobs_or_zero_occ_atoms.polymer_flag Y _pdbx_unobs_or_zero_occ_atoms.occupancy_flag 1 _pdbx_unobs_or_zero_occ_atoms.auth_asym_id A _pdbx_unobs_or_zero_occ_atoms.auth_comp_id PRO _pdbx_unobs_or_zero_occ_atoms.auth_seq_id 55 _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code ? _pdbx_unobs_or_zero_occ_atoms.auth_atom_id O _pdbx_unobs_or_zero_occ_atoms.label_alt_id ? _pdbx_unobs_or_zero_occ_atoms.label_asym_id C _pdbx_unobs_or_zero_occ_atoms.label_comp_id PRO _pdbx_unobs_or_zero_occ_atoms.label_seq_id 55 _pdbx_unobs_or_zero_occ_atoms.label_atom_id O # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.1.19 ? 1 DENZO 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 MLPHARE phasing . ? 4 # _cell.entry_id 1RH6 _cell.length_a 80.215 _cell.length_b 72.691 _cell.length_c 38.801 _cell.angle_alpha 90.00 _cell.angle_beta 104.11 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1RH6 _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # _exptl.entry_id 1RH6 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 3 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 52.38 _exptl_crystal.description ? _exptl_crystal.density_Matthews 2.60 _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details 'NaOAc, imidazole, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 NaOAc ? ? ? 1 2 1 imidazole ? ? ? 1 3 1 H2O ? ? ? 1 4 2 NaOAc ? ? ? 1 5 2 imidazole ? ? ? 1 6 2 H2O ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2002-03-07 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.10 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X8C' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X8C _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.10 # _reflns.entry_id 1RH6 _reflns.observed_criterion_sigma_F 3.0 _reflns.observed_criterion_sigma_I 3.0 _reflns.d_resolution_high 1.70 _reflns.d_resolution_low 100 _reflns.number_all ? _reflns.number_obs 32190 _reflns.percent_possible_obs 93.1 _reflns.pdbx_Rmerge_I_obs 0.05 _reflns.pdbx_Rsym_value 0.05 _reflns.pdbx_netI_over_sigmaI 19.8 _reflns.B_iso_Wilson_estimate 24.125 _reflns.pdbx_redundancy 93.1 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.70 _reflns_shell.d_res_low 1.78 _reflns_shell.percent_possible_all 95.8 _reflns_shell.Rmerge_I_obs 0.135 _reflns_shell.pdbx_Rsym_value 0.152 _reflns_shell.meanI_over_sigI_obs 8.2 _reflns_shell.pdbx_redundancy 95.8 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 3280 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1RH6 _refine.ls_number_reflns_obs 21990 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I 3.0 _refine.pdbx_ls_sigma_F 3.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.00 _refine.ls_d_res_high 1.70 _refine.ls_percent_reflns_obs 97.27 _refine.ls_R_factor_obs 0.19293 _refine.ls_R_factor_all 0.19293 _refine.ls_R_factor_R_work 0.19117 _refine.ls_R_factor_R_free 0.22553 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 1161 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.964 _refine.correlation_coeff_Fo_to_Fc_free 0.947 _refine.B_iso_mean 31.551 _refine.aniso_B[1][1] 3.63 _refine.aniso_B[2][2] -1.23 _refine.aniso_B[3][3] -1.82 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 1.19 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MIR _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.110 _refine.pdbx_overall_ESU_R_Free 0.108 _refine.overall_SU_ML 0.086 _refine.overall_SU_B 2.618 _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1RH6 _refine_analyze.Luzzati_coordinate_error_obs 0.110 _refine_analyze.Luzzati_sigma_a_obs 0.086 _refine_analyze.Luzzati_d_res_low_obs 20 _refine_analyze.Luzzati_coordinate_error_free 0.108 _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 931 _refine_hist.pdbx_number_atoms_nucleic_acid 574 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 152 _refine_hist.number_atoms_total 1657 _refine_hist.d_res_high 1.70 _refine_hist.d_res_low 20.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.025 0.021 ? 1598 'X-RAY DIFFRACTION' ? r_bond_other_d 0.002 0.020 ? 1173 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.582 2.397 ? 2278 'X-RAY DIFFRACTION' ? r_angle_other_deg 1.202 3.000 ? 2752 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.203 5.000 ? 105 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_chiral_restr 0.138 0.200 ? 215 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.013 0.020 ? 1329 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.009 0.020 ? 241 'X-RAY DIFFRACTION' ? r_nbd_refined 0.223 0.200 ? 239 'X-RAY DIFFRACTION' ? r_nbd_other 0.250 0.200 ? 1286 'X-RAY DIFFRACTION' ? r_nbtor_other 0.092 0.200 ? 773 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.238 0.200 ? 95 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.297 0.200 ? 19 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.420 0.200 ? 95 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.247 0.200 ? 35 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.471 1.500 ? 539 'X-RAY DIFFRACTION' ? r_mcangle_it 2.464 2.000 ? 882 'X-RAY DIFFRACTION' ? r_scbond_it 3.102 3.000 ? 1059 'X-RAY DIFFRACTION' ? r_scangle_it 4.492 4.500 ? 1396 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.700 _refine_ls_shell.d_res_low 1.744 _refine_ls_shell.number_reflns_R_work 1613 _refine_ls_shell.R_factor_R_work 0.23 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.271 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 78 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.R_factor_all ? # _database_PDB_matrix.entry_id 1RH6 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1RH6 _struct.title 'Bacteriophage Lambda Excisionase (Xis)-DNA Complex' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1RH6 _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN/DNA' _struct_keywords.text ;Protein-DNA complex, DNA architectural protein, 'winged'-helix protein, phage excision, site-specific DNA recombination, DNA BINDING PROTEIN-DNA COMPLEX ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP VXIS_LAMBD P03699 3 MYLTLQEWNARQRRPRSLETVRRWVRECRIFPPPVKDGREYLFHESAVKVDLNRP 1 ? 2 PDB 1RH6 1RH6 1 ? ? ? 3 PDB 1RH6 1RH6 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1RH6 A 1 ? 55 ? P03699 1 ? 55 ? 1 55 2 1 1RH6 B 1 ? 55 ? P03699 1 ? 55 ? 1 55 3 2 1RH6 C 1 ? 15 ? 1RH6 1 ? 15 ? 1 15 4 3 1RH6 D 1 ? 15 ? 1RH6 16 ? 30 ? 16 30 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1RH6 SER A 28 ? UNP P03699 CYS 28 'engineered mutation' 28 1 2 1RH6 SER B 28 ? UNP P03699 CYS 28 'engineered mutation' 28 2 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? trimeric 3 2 author_defined_assembly ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,D,E,F,H 2 1 C,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_biol.id _struct_biol.pdbx_parent_biol_id _struct_biol.details 1 ? ? 2 ? ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR C 4 ? ARG C 11 ? THR A 4 ARG A 11 1 ? 8 HELX_P HELX_P2 2 SER C 17 ? GLU C 27 ? SER A 17 GLU A 27 1 ? 11 HELX_P HELX_P3 3 LEU D 5 ? GLN D 12 ? LEU B 5 GLN B 12 1 ? 8 HELX_P HELX_P4 4 SER D 17 ? GLU D 27 ? SER B 17 GLU B 27 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DT 2 N3 ? ? ? 1_555 B DA 14 N1 ? ? C DT 2 D DA 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DT 2 O4 ? ? ? 1_555 B DA 14 N6 ? ? C DT 2 D DA 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DA 3 N1 ? ? ? 1_555 B DT 13 N3 ? ? C DA 3 D DT 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DA 3 N6 ? ? ? 1_555 B DT 13 O4 ? ? C DA 3 D DT 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DT 4 N3 ? ? ? 1_555 B DA 12 N1 ? ? C DT 4 D DA 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DT 4 O4 ? ? ? 1_555 B DA 12 N6 ? ? C DT 4 D DA 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 5 N1 ? ? ? 1_555 B DC 11 N3 ? ? C DG 5 D DC 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 5 N2 ? ? ? 1_555 B DC 11 O2 ? ? C DG 5 D DC 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 5 O6 ? ? ? 1_555 B DC 11 N4 ? ? C DG 5 D DC 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DT 6 N3 ? ? ? 1_555 B DA 10 N1 ? ? C DT 6 D DA 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DT 6 O4 ? ? ? 1_555 B DA 10 N6 ? ? C DT 6 D DA 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DA 7 N1 ? ? ? 1_555 B DT 9 N3 ? ? C DA 7 D DT 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DA 7 N6 ? ? ? 1_555 B DT 9 O4 ? ? C DA 7 D DT 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DG 8 N1 ? ? ? 1_555 B DC 8 N3 ? ? C DG 8 D DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DG 8 N2 ? ? ? 1_555 B DC 8 O2 ? ? C DG 8 D DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DG 8 O6 ? ? ? 1_555 B DC 8 N4 ? ? C DG 8 D DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DT 9 N3 ? ? ? 1_555 B DA 7 N1 ? ? C DT 9 D DA 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DT 9 O4 ? ? ? 1_555 B DA 7 N6 ? ? C DT 9 D DA 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DC 10 N3 ? ? ? 1_555 B DG 6 N1 ? ? C DC 10 D DG 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DC 10 N4 ? ? ? 1_555 B DG 6 O6 ? ? C DC 10 D DG 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DC 10 O2 ? ? ? 1_555 B DG 6 N2 ? ? C DC 10 D DG 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DT 11 N3 ? ? ? 1_555 B DA 5 N1 ? ? C DT 11 D DA 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DT 11 O4 ? ? ? 1_555 B DA 5 N6 ? ? C DT 11 D DA 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DG 12 N1 ? ? ? 1_555 B DC 4 N3 ? ? C DG 12 D DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DG 12 N2 ? ? ? 1_555 B DC 4 O2 ? ? C DG 12 D DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DG 12 O6 ? ? ? 1_555 B DC 4 N4 ? ? C DG 12 D DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DT 13 N3 ? ? ? 1_555 B DA 3 N1 ? ? C DT 13 D DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DT 13 O4 ? ? ? 1_555 B DA 3 N6 ? ? C DT 13 D DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DT 14 N3 ? ? ? 1_555 B DA 2 N1 ? ? C DT 14 D DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DT 14 O4 ? ? ? 1_555 B DA 2 N6 ? ? C DT 14 D DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DG 15 N1 ? ? ? 1_555 B DC 1 N3 ? ? C DG 15 D DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DG 15 N2 ? ? ? 1_555 B DC 1 O2 ? ? C DG 15 D DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DG 15 O6 ? ? ? 1_555 B DC 1 N4 ? ? C DG 15 D DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 PHE 31 C . ? PHE 31 A PRO 32 C ? PRO 32 A 1 -7.30 2 PHE 31 D . ? PHE 31 B PRO 32 D ? PRO 32 B 1 -0.78 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 2 ? C ? 3 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel D 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR C 2 ? LEU C 3 ? TYR A 2 LEU A 3 A 2 GLU C 40 ? HIS C 44 ? GLU A 40 HIS A 44 A 3 VAL C 35 ? ASP C 37 ? VAL A 35 ASP A 37 B 1 ILE C 30 ? PHE C 31 ? ILE A 30 PHE A 31 B 2 VAL C 48 ? LYS C 49 ? VAL A 48 LYS A 49 C 1 TYR D 2 ? THR D 4 ? TYR B 2 THR B 4 C 2 GLU D 40 ? HIS D 44 ? GLU B 40 HIS B 44 C 3 VAL D 35 ? ASP D 37 ? VAL B 35 ASP B 37 D 1 ILE D 30 ? PHE D 31 ? ILE B 30 PHE B 31 D 2 VAL D 48 ? LYS D 49 ? VAL B 48 LYS B 49 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU C 3 ? N LEU A 3 O PHE C 43 ? O PHE A 43 A 2 3 O LEU C 42 ? O LEU A 42 N VAL C 35 ? N VAL A 35 B 1 2 N PHE C 31 ? N PHE A 31 O VAL C 48 ? O VAL A 48 C 1 2 N LEU D 3 ? N LEU B 3 O PHE D 43 ? O PHE B 43 C 2 3 O GLU D 40 ? O GLU B 40 N ASP D 37 ? N ASP B 37 D 1 2 N PHE D 31 ? N PHE B 31 O VAL D 48 ? O VAL B 48 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OP1 D DC 19 ? ? O D HOH 51 ? ? 1.69 2 1 OP2 D DA 20 ? ? O D HOH 122 ? ? 1.84 3 1 NH2 B ARG 26 ? ? O B HOH 100 ? ? 2.02 4 1 O D HOH 31 ? ? O D HOH 117 ? ? 2.16 5 1 O C HOH 23 ? ? O B HOH 115 ? ? 2.17 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 NH2 B ARG 13 ? ? 1_555 O C HOH 36 ? ? 4_545 1.81 2 1 OE2 A GLU 27 ? ? 1_555 O B HOH 122 ? ? 4_556 1.96 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "O3'" C DT 4 ? ? P C DG 5 ? ? 1.532 1.607 -0.075 0.012 Y 2 1 C8 C DG 5 ? ? N9 C DG 5 ? ? 1.425 1.374 0.051 0.007 N 3 1 "O3'" C DA 7 ? ? "C3'" C DA 7 ? ? 1.378 1.419 -0.041 0.006 N 4 1 C2 C DG 8 ? ? N3 C DG 8 ? ? 1.382 1.323 0.059 0.008 N 5 1 C6 C DG 12 ? ? O6 C DG 12 ? ? 1.308 1.237 0.071 0.009 N 6 1 C6 C DT 14 ? ? N1 C DT 14 ? ? 1.329 1.378 -0.049 0.007 N 7 1 "O3'" D DC 16 ? ? "C3'" D DC 16 ? ? 1.368 1.419 -0.051 0.006 N 8 1 P D DC 19 ? ? "O5'" D DC 19 ? ? 1.669 1.593 0.076 0.010 N 9 1 C6 D DG 21 ? ? N1 D DG 21 ? ? 1.347 1.391 -0.044 0.007 N 10 1 "O3'" D DA 22 ? ? "C3'" D DA 22 ? ? 1.363 1.419 -0.056 0.006 N 11 1 C4 D DA 22 ? ? C5 D DA 22 ? ? 1.332 1.383 -0.051 0.007 N 12 1 P D DT 24 ? ? "O5'" D DT 24 ? ? 1.699 1.593 0.106 0.010 N 13 1 P D DA 25 ? ? "O5'" D DA 25 ? ? 1.660 1.593 0.067 0.010 N 14 1 "C5'" D DA 25 ? ? "C4'" D DA 25 ? ? 1.560 1.512 0.048 0.007 N 15 1 CB A VAL 21 ? ? CG1 A VAL 21 ? ? 1.670 1.524 0.146 0.021 N 16 1 CD A GLU 40 ? ? OE2 A GLU 40 ? ? 1.328 1.252 0.076 0.011 N 17 1 CG B ARG 13 ? ? CD B ARG 13 ? ? 1.276 1.515 -0.239 0.025 N 18 1 CD B GLU 40 ? ? OE2 B GLU 40 ? ? 1.352 1.252 0.100 0.011 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 N1 C DT 2 ? ? "C1'" C DT 2 ? ? "C2'" C DT 2 ? ? 123.18 114.30 8.88 1.40 N 2 1 N9 C DA 3 ? ? C4 C DA 3 ? ? C5 C DA 3 ? ? 102.48 105.80 -3.32 0.40 N 3 1 N1 C DA 3 ? ? C6 C DA 3 ? ? N6 C DA 3 ? ? 123.61 118.60 5.01 0.60 N 4 1 C5 C DA 3 ? ? C6 C DA 3 ? ? N6 C DA 3 ? ? 117.49 123.70 -6.21 0.80 N 5 1 "O5'" C DT 4 ? ? P C DT 4 ? ? OP2 C DT 4 ? ? 99.05 105.70 -6.65 0.90 N 6 1 "O4'" C DT 4 ? ? "C1'" C DT 4 ? ? N1 C DT 4 ? ? 111.12 108.30 2.82 0.30 N 7 1 C5 C DG 5 ? ? C6 C DG 5 ? ? N1 C DG 5 ? ? 115.24 111.50 3.74 0.50 N 8 1 N1 C DG 5 ? ? C6 C DG 5 ? ? O6 C DG 5 ? ? 115.81 119.90 -4.09 0.60 N 9 1 "O3'" C DG 5 ? ? P C DT 6 ? ? OP2 C DT 6 ? ? 117.42 110.50 6.92 1.10 Y 10 1 "O4'" C DT 6 ? ? "C1'" C DT 6 ? ? N1 C DT 6 ? ? 102.81 108.00 -5.19 0.70 N 11 1 "O4'" C DA 7 ? ? "C1'" C DA 7 ? ? N9 C DA 7 ? ? 116.40 108.30 8.10 0.30 N 12 1 C6 C DA 7 ? ? N1 C DA 7 ? ? C2 C DA 7 ? ? 122.80 118.60 4.20 0.60 N 13 1 "O4'" C DG 8 ? ? "C4'" C DG 8 ? ? "C3'" C DG 8 ? ? 100.05 104.50 -4.45 0.40 N 14 1 "C1'" C DG 8 ? ? "O4'" C DG 8 ? ? "C4'" C DG 8 ? ? 103.86 110.10 -6.24 1.00 N 15 1 "C4'" C DG 8 ? ? "C3'" C DG 8 ? ? "C2'" C DG 8 ? ? 97.15 102.20 -5.05 0.70 N 16 1 C6 C DG 8 ? ? N1 C DG 8 ? ? C2 C DG 8 ? ? 129.63 125.10 4.53 0.60 N 17 1 N1 C DG 8 ? ? C2 C DG 8 ? ? N3 C DG 8 ? ? 119.84 123.90 -4.06 0.60 N 18 1 N3 C DG 8 ? ? C4 C DG 8 ? ? C5 C DG 8 ? ? 132.04 128.60 3.44 0.50 N 19 1 C4 C DG 8 ? ? C5 C DG 8 ? ? N7 C DG 8 ? ? 113.29 110.80 2.49 0.40 N 20 1 N3 C DG 8 ? ? C2 C DG 8 ? ? N2 C DG 8 ? ? 124.52 119.90 4.62 0.70 N 21 1 N1 C DG 8 ? ? C6 C DG 8 ? ? O6 C DG 8 ? ? 125.34 119.90 5.44 0.60 N 22 1 C5 C DG 8 ? ? C6 C DG 8 ? ? O6 C DG 8 ? ? 123.94 128.60 -4.66 0.60 N 23 1 C2 C DC 10 ? ? N3 C DC 10 ? ? C4 C DC 10 ? ? 123.77 119.90 3.87 0.50 N 24 1 N3 C DT 11 ? ? C4 C DT 11 ? ? O4 C DT 11 ? ? 123.65 119.90 3.75 0.60 N 25 1 OP1 C DG 12 ? ? P C DG 12 ? ? OP2 C DG 12 ? ? 129.93 119.60 10.33 1.50 N 26 1 "O5'" C DG 12 ? ? P C DG 12 ? ? OP2 C DG 12 ? ? 96.34 105.70 -9.36 0.90 N 27 1 "O4'" C DG 12 ? ? "C1'" C DG 12 ? ? N9 C DG 12 ? ? 103.79 108.00 -4.21 0.70 N 28 1 C2 C DG 12 ? ? N3 C DG 12 ? ? C4 C DG 12 ? ? 114.96 111.90 3.06 0.50 N 29 1 N1 C DG 12 ? ? C6 C DG 12 ? ? O6 C DG 12 ? ? 115.58 119.90 -4.32 0.60 N 30 1 "O4'" C DT 13 ? ? "C1'" C DT 13 ? ? "C2'" C DT 13 ? ? 100.65 105.90 -5.25 0.80 N 31 1 "O4'" C DT 13 ? ? "C1'" C DT 13 ? ? N1 C DT 13 ? ? 103.70 108.00 -4.30 0.70 N 32 1 C5 C DT 13 ? ? C4 C DT 13 ? ? O4 C DT 13 ? ? 120.34 124.90 -4.56 0.70 N 33 1 C4 C DT 13 ? ? C5 C DT 13 ? ? C7 C DT 13 ? ? 123.06 119.00 4.06 0.60 N 34 1 C6 C DT 14 ? ? N1 C DT 14 ? ? C2 C DT 14 ? ? 118.21 121.30 -3.09 0.50 N 35 1 N1 C DT 14 ? ? C2 C DT 14 ? ? N3 C DT 14 ? ? 110.92 114.60 -3.68 0.60 N 36 1 C2 C DT 14 ? ? N3 C DT 14 ? ? C4 C DT 14 ? ? 134.27 127.20 7.07 0.60 N 37 1 C4 C DT 14 ? ? C5 C DT 14 ? ? C6 C DT 14 ? ? 113.91 118.00 -4.09 0.60 N 38 1 C5 C DT 14 ? ? C6 C DT 14 ? ? N1 C DT 14 ? ? 129.87 123.70 6.17 0.60 N 39 1 N3 C DT 14 ? ? C2 C DT 14 ? ? O2 C DT 14 ? ? 127.24 122.30 4.94 0.60 N 40 1 N3 C DT 14 ? ? C4 C DT 14 ? ? O4 C DT 14 ? ? 129.42 119.90 9.52 0.60 N 41 1 C5 C DT 14 ? ? C4 C DT 14 ? ? O4 C DT 14 ? ? 117.97 124.90 -6.93 0.70 N 42 1 C6 C DG 15 ? ? N1 C DG 15 ? ? C2 C DG 15 ? ? 121.37 125.10 -3.73 0.60 N 43 1 N1 C DG 15 ? ? C2 C DG 15 ? ? N3 C DG 15 ? ? 131.02 123.90 7.12 0.60 N 44 1 C2 C DG 15 ? ? N3 C DG 15 ? ? C4 C DG 15 ? ? 105.64 111.90 -6.26 0.50 N 45 1 C5 C DG 15 ? ? N7 C DG 15 ? ? C8 C DG 15 ? ? 101.20 104.30 -3.10 0.50 N 46 1 N3 C DG 15 ? ? C4 C DG 15 ? ? N9 C DG 15 ? ? 122.26 126.00 -3.74 0.60 N 47 1 N3 C DG 15 ? ? C2 C DG 15 ? ? N2 C DG 15 ? ? 112.78 119.90 -7.12 0.70 N 48 1 "O4'" D DC 16 ? ? "C1'" D DC 16 ? ? N1 D DC 16 ? ? 110.19 108.30 1.89 0.30 N 49 1 "O4'" D DA 17 ? ? "C1'" D DA 17 ? ? N9 D DA 17 ? ? 103.49 108.00 -4.51 0.70 N 50 1 "O4'" D DA 18 ? ? "C1'" D DA 18 ? ? N9 D DA 18 ? ? 111.73 108.30 3.43 0.30 N 51 1 N1 D DA 18 ? ? C2 D DA 18 ? ? N3 D DA 18 ? ? 132.78 129.30 3.48 0.50 N 52 1 C2 D DA 18 ? ? N3 D DA 18 ? ? C4 D DA 18 ? ? 106.98 110.60 -3.62 0.50 N 53 1 C4 D DA 18 ? ? C5 D DA 18 ? ? C6 D DA 18 ? ? 120.19 117.00 3.19 0.50 N 54 1 "C1'" D DG 21 ? ? "O4'" D DG 21 ? ? "C4'" D DG 21 ? ? 100.72 110.10 -9.38 1.00 N 55 1 C6 D DA 22 ? ? N1 D DA 22 ? ? C2 D DA 22 ? ? 122.86 118.60 4.26 0.60 N 56 1 N1 D DA 22 ? ? C2 D DA 22 ? ? N3 D DA 22 ? ? 125.11 129.30 -4.19 0.50 N 57 1 N3 D DA 22 ? ? C4 D DA 22 ? ? C5 D DA 22 ? ? 131.53 126.80 4.73 0.70 N 58 1 C4 D DA 22 ? ? C5 D DA 22 ? ? N7 D DA 22 ? ? 115.03 110.70 4.33 0.50 N 59 1 C5 D DA 22 ? ? N7 D DA 22 ? ? C8 D DA 22 ? ? 100.73 103.90 -3.17 0.50 N 60 1 "O5'" D DC 23 ? ? P D DC 23 ? ? OP2 D DC 23 ? ? 99.00 105.70 -6.70 0.90 N 61 1 "O4'" D DC 23 ? ? "C4'" D DC 23 ? ? "C3'" D DC 23 ? ? 97.22 104.50 -7.28 0.40 N 62 1 "C5'" D DC 23 ? ? "C4'" D DC 23 ? ? "C3'" D DC 23 ? ? 128.54 115.70 12.84 1.20 N 63 1 "C1'" D DC 23 ? ? "O4'" D DC 23 ? ? "C4'" D DC 23 ? ? 101.33 110.10 -8.77 1.00 N 64 1 "C4'" D DC 23 ? ? "C3'" D DC 23 ? ? "C2'" D DC 23 ? ? 93.10 102.20 -9.10 0.70 N 65 1 "O4'" D DC 23 ? ? "C1'" D DC 23 ? ? N1 D DC 23 ? ? 110.13 108.30 1.83 0.30 N 66 1 N1 D DC 23 ? ? C2 D DC 23 ? ? N3 D DC 23 ? ? 114.62 119.20 -4.58 0.70 N 67 1 C2 D DC 23 ? ? N3 D DC 23 ? ? C4 D DC 23 ? ? 125.83 119.90 5.93 0.50 N 68 1 C4 D DC 23 ? ? C5 D DC 23 ? ? C6 D DC 23 ? ? 112.16 117.40 -5.24 0.50 N 69 1 C5 D DC 23 ? ? C6 D DC 23 ? ? N1 D DC 23 ? ? 126.91 121.00 5.91 0.50 N 70 1 N3 D DC 23 ? ? C2 D DC 23 ? ? O2 D DC 23 ? ? 126.85 121.90 4.95 0.70 N 71 1 C6 D DC 23 ? ? N1 D DC 23 ? ? "C1'" D DC 23 ? ? 128.18 120.80 7.38 1.20 N 72 1 C2 D DC 23 ? ? N1 D DC 23 ? ? "C1'" D DC 23 ? ? 111.89 118.80 -6.91 1.10 N 73 1 "O4'" D DT 24 ? ? "C4'" D DT 24 ? ? "C3'" D DT 24 ? ? 100.03 104.50 -4.47 0.40 N 74 1 C6 D DT 24 ? ? N1 D DT 24 ? ? C2 D DT 24 ? ? 117.69 121.30 -3.61 0.50 N 75 1 "O3'" D DT 24 ? ? P D DA 25 ? ? OP2 D DA 25 ? ? 121.83 110.50 11.33 1.10 Y 76 1 "O5'" D DA 25 ? ? "C5'" D DA 25 ? ? "C4'" D DA 25 ? ? 104.33 109.40 -5.07 0.80 N 77 1 "O4'" D DC 26 ? ? "C1'" D DC 26 ? ? N1 D DC 26 ? ? 112.32 108.30 4.02 0.30 N 78 1 "O5'" D DA 27 ? ? "C5'" D DA 27 ? ? "C4'" D DA 27 ? ? 104.59 109.40 -4.81 0.80 N 79 1 "O4'" D DA 27 ? ? "C1'" D DA 27 ? ? N9 D DA 27 ? ? 117.39 108.30 9.09 0.30 N 80 1 "C1'" D DT 28 ? ? "O4'" D DT 28 ? ? "C4'" D DT 28 ? ? 103.64 110.10 -6.46 1.00 N 81 1 "C3'" D DT 28 ? ? "C2'" D DT 28 ? ? "C1'" D DT 28 ? ? 94.68 102.40 -7.72 0.80 N 82 1 "O4'" D DT 28 ? ? "C1'" D DT 28 ? ? N1 D DT 28 ? ? 117.63 108.30 9.33 0.30 N 83 1 NE B ARG 11 ? ? CZ B ARG 11 ? ? NH1 B ARG 11 ? ? 123.34 120.30 3.04 0.50 N 84 1 NE B ARG 26 ? ? CZ B ARG 26 ? ? NH1 B ARG 26 ? ? 127.46 120.30 7.16 0.50 N 85 1 NE B ARG 26 ? ? CZ B ARG 26 ? ? NH2 B ARG 26 ? ? 113.09 120.30 -7.21 0.50 N # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 C DC 1 ? A DC 1 2 1 Y 1 D DG 30 ? B DG 15 3 1 Y 1 B ASN 53 ? D ASN 53 4 1 Y 1 B ARG 54 ? D ARG 54 5 1 Y 1 B PRO 55 ? D PRO 55 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HIS N N N N 280 HIS CA C N S 281 HIS C C N N 282 HIS O O N N 283 HIS CB C N N 284 HIS CG C Y N 285 HIS ND1 N Y N 286 HIS CD2 C Y N 287 HIS CE1 C Y N 288 HIS NE2 N Y N 289 HIS OXT O N N 290 HIS H H N N 291 HIS H2 H N N 292 HIS HA H N N 293 HIS HB2 H N N 294 HIS HB3 H N N 295 HIS HD1 H N N 296 HIS HD2 H N N 297 HIS HE1 H N N 298 HIS HE2 H N N 299 HIS HXT H N N 300 HOH O O N N 301 HOH H1 H N N 302 HOH H2 H N N 303 ILE N N N N 304 ILE CA C N S 305 ILE C C N N 306 ILE O O N N 307 ILE CB C N S 308 ILE CG1 C N N 309 ILE CG2 C N N 310 ILE CD1 C N N 311 ILE OXT O N N 312 ILE H H N N 313 ILE H2 H N N 314 ILE HA H N N 315 ILE HB H N N 316 ILE HG12 H N N 317 ILE HG13 H N N 318 ILE HG21 H N N 319 ILE HG22 H N N 320 ILE HG23 H N N 321 ILE HD11 H N N 322 ILE HD12 H N N 323 ILE HD13 H N N 324 ILE HXT H N N 325 LEU N N N N 326 LEU CA C N S 327 LEU C C N N 328 LEU O O N N 329 LEU CB C N N 330 LEU CG C N N 331 LEU CD1 C N N 332 LEU CD2 C N N 333 LEU OXT O N N 334 LEU H H N N 335 LEU H2 H N N 336 LEU HA H N N 337 LEU HB2 H N N 338 LEU HB3 H N N 339 LEU HG H N N 340 LEU HD11 H N N 341 LEU HD12 H N N 342 LEU HD13 H N N 343 LEU HD21 H N N 344 LEU HD22 H N N 345 LEU HD23 H N N 346 LEU HXT H N N 347 LYS N N N N 348 LYS CA C N S 349 LYS C C N N 350 LYS O O N N 351 LYS CB C N N 352 LYS CG C N N 353 LYS CD C N N 354 LYS CE C N N 355 LYS NZ N N N 356 LYS OXT O N N 357 LYS H H N N 358 LYS H2 H N N 359 LYS HA H N N 360 LYS HB2 H N N 361 LYS HB3 H N N 362 LYS HG2 H N N 363 LYS HG3 H N N 364 LYS HD2 H N N 365 LYS HD3 H N N 366 LYS HE2 H N N 367 LYS HE3 H N N 368 LYS HZ1 H N N 369 LYS HZ2 H N N 370 LYS HZ3 H N N 371 LYS HXT H N N 372 MET N N N N 373 MET CA C N S 374 MET C C N N 375 MET O O N N 376 MET CB C N N 377 MET CG C N N 378 MET SD S N N 379 MET CE C N N 380 MET OXT O N N 381 MET H H N N 382 MET H2 H N N 383 MET HA H N N 384 MET HB2 H N N 385 MET HB3 H N N 386 MET HG2 H N N 387 MET HG3 H N N 388 MET HE1 H N N 389 MET HE2 H N N 390 MET HE3 H N N 391 MET HXT H N N 392 PHE N N N N 393 PHE CA C N S 394 PHE C C N N 395 PHE O O N N 396 PHE CB C N N 397 PHE CG C Y N 398 PHE CD1 C Y N 399 PHE CD2 C Y N 400 PHE CE1 C Y N 401 PHE CE2 C Y N 402 PHE CZ C Y N 403 PHE OXT O N N 404 PHE H H N N 405 PHE H2 H N N 406 PHE HA H N N 407 PHE HB2 H N N 408 PHE HB3 H N N 409 PHE HD1 H N N 410 PHE HD2 H N N 411 PHE HE1 H N N 412 PHE HE2 H N N 413 PHE HZ H N N 414 PHE HXT H N N 415 PRO N N N N 416 PRO CA C N S 417 PRO C C N N 418 PRO O O N N 419 PRO CB C N N 420 PRO CG C N N 421 PRO CD C N N 422 PRO OXT O N N 423 PRO H H N N 424 PRO HA H N N 425 PRO HB2 H N N 426 PRO HB3 H N N 427 PRO HG2 H N N 428 PRO HG3 H N N 429 PRO HD2 H N N 430 PRO HD3 H N N 431 PRO HXT H N N 432 SER N N N N 433 SER CA C N S 434 SER C C N N 435 SER O O N N 436 SER CB C N N 437 SER OG O N N 438 SER OXT O N N 439 SER H H N N 440 SER H2 H N N 441 SER HA H N N 442 SER HB2 H N N 443 SER HB3 H N N 444 SER HG H N N 445 SER HXT H N N 446 THR N N N N 447 THR CA C N S 448 THR C C N N 449 THR O O N N 450 THR CB C N R 451 THR OG1 O N N 452 THR CG2 C N N 453 THR OXT O N N 454 THR H H N N 455 THR H2 H N N 456 THR HA H N N 457 THR HB H N N 458 THR HG1 H N N 459 THR HG21 H N N 460 THR HG22 H N N 461 THR HG23 H N N 462 THR HXT H N N 463 TRP N N N N 464 TRP CA C N S 465 TRP C C N N 466 TRP O O N N 467 TRP CB C N N 468 TRP CG C Y N 469 TRP CD1 C Y N 470 TRP CD2 C Y N 471 TRP NE1 N Y N 472 TRP CE2 C Y N 473 TRP CE3 C Y N 474 TRP CZ2 C Y N 475 TRP CZ3 C Y N 476 TRP CH2 C Y N 477 TRP OXT O N N 478 TRP H H N N 479 TRP H2 H N N 480 TRP HA H N N 481 TRP HB2 H N N 482 TRP HB3 H N N 483 TRP HD1 H N N 484 TRP HE1 H N N 485 TRP HE3 H N N 486 TRP HZ2 H N N 487 TRP HZ3 H N N 488 TRP HH2 H N N 489 TRP HXT H N N 490 TYR N N N N 491 TYR CA C N S 492 TYR C C N N 493 TYR O O N N 494 TYR CB C N N 495 TYR CG C Y N 496 TYR CD1 C Y N 497 TYR CD2 C Y N 498 TYR CE1 C Y N 499 TYR CE2 C Y N 500 TYR CZ C Y N 501 TYR OH O N N 502 TYR OXT O N N 503 TYR H H N N 504 TYR H2 H N N 505 TYR HA H N N 506 TYR HB2 H N N 507 TYR HB3 H N N 508 TYR HD1 H N N 509 TYR HD2 H N N 510 TYR HE1 H N N 511 TYR HE2 H N N 512 TYR HH H N N 513 TYR HXT H N N 514 VAL N N N N 515 VAL CA C N S 516 VAL C C N N 517 VAL O O N N 518 VAL CB C N N 519 VAL CG1 C N N 520 VAL CG2 C N N 521 VAL OXT O N N 522 VAL H H N N 523 VAL H2 H N N 524 VAL HA H N N 525 VAL HB H N N 526 VAL HG11 H N N 527 VAL HG12 H N N 528 VAL HG13 H N N 529 VAL HG21 H N N 530 VAL HG22 H N N 531 VAL HG23 H N N 532 VAL HXT H N N 533 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 HOH O H1 sing N N 299 HOH O H2 sing N N 300 ILE N CA sing N N 301 ILE N H sing N N 302 ILE N H2 sing N N 303 ILE CA C sing N N 304 ILE CA CB sing N N 305 ILE CA HA sing N N 306 ILE C O doub N N 307 ILE C OXT sing N N 308 ILE CB CG1 sing N N 309 ILE CB CG2 sing N N 310 ILE CB HB sing N N 311 ILE CG1 CD1 sing N N 312 ILE CG1 HG12 sing N N 313 ILE CG1 HG13 sing N N 314 ILE CG2 HG21 sing N N 315 ILE CG2 HG22 sing N N 316 ILE CG2 HG23 sing N N 317 ILE CD1 HD11 sing N N 318 ILE CD1 HD12 sing N N 319 ILE CD1 HD13 sing N N 320 ILE OXT HXT sing N N 321 LEU N CA sing N N 322 LEU N H sing N N 323 LEU N H2 sing N N 324 LEU CA C sing N N 325 LEU CA CB sing N N 326 LEU CA HA sing N N 327 LEU C O doub N N 328 LEU C OXT sing N N 329 LEU CB CG sing N N 330 LEU CB HB2 sing N N 331 LEU CB HB3 sing N N 332 LEU CG CD1 sing N N 333 LEU CG CD2 sing N N 334 LEU CG HG sing N N 335 LEU CD1 HD11 sing N N 336 LEU CD1 HD12 sing N N 337 LEU CD1 HD13 sing N N 338 LEU CD2 HD21 sing N N 339 LEU CD2 HD22 sing N N 340 LEU CD2 HD23 sing N N 341 LEU OXT HXT sing N N 342 LYS N CA sing N N 343 LYS N H sing N N 344 LYS N H2 sing N N 345 LYS CA C sing N N 346 LYS CA CB sing N N 347 LYS CA HA sing N N 348 LYS C O doub N N 349 LYS C OXT sing N N 350 LYS CB CG sing N N 351 LYS CB HB2 sing N N 352 LYS CB HB3 sing N N 353 LYS CG CD sing N N 354 LYS CG HG2 sing N N 355 LYS CG HG3 sing N N 356 LYS CD CE sing N N 357 LYS CD HD2 sing N N 358 LYS CD HD3 sing N N 359 LYS CE NZ sing N N 360 LYS CE HE2 sing N N 361 LYS CE HE3 sing N N 362 LYS NZ HZ1 sing N N 363 LYS NZ HZ2 sing N N 364 LYS NZ HZ3 sing N N 365 LYS OXT HXT sing N N 366 MET N CA sing N N 367 MET N H sing N N 368 MET N H2 sing N N 369 MET CA C sing N N 370 MET CA CB sing N N 371 MET CA HA sing N N 372 MET C O doub N N 373 MET C OXT sing N N 374 MET CB CG sing N N 375 MET CB HB2 sing N N 376 MET CB HB3 sing N N 377 MET CG SD sing N N 378 MET CG HG2 sing N N 379 MET CG HG3 sing N N 380 MET SD CE sing N N 381 MET CE HE1 sing N N 382 MET CE HE2 sing N N 383 MET CE HE3 sing N N 384 MET OXT HXT sing N N 385 PHE N CA sing N N 386 PHE N H sing N N 387 PHE N H2 sing N N 388 PHE CA C sing N N 389 PHE CA CB sing N N 390 PHE CA HA sing N N 391 PHE C O doub N N 392 PHE C OXT sing N N 393 PHE CB CG sing N N 394 PHE CB HB2 sing N N 395 PHE CB HB3 sing N N 396 PHE CG CD1 doub Y N 397 PHE CG CD2 sing Y N 398 PHE CD1 CE1 sing Y N 399 PHE CD1 HD1 sing N N 400 PHE CD2 CE2 doub Y N 401 PHE CD2 HD2 sing N N 402 PHE CE1 CZ doub Y N 403 PHE CE1 HE1 sing N N 404 PHE CE2 CZ sing Y N 405 PHE CE2 HE2 sing N N 406 PHE CZ HZ sing N N 407 PHE OXT HXT sing N N 408 PRO N CA sing N N 409 PRO N CD sing N N 410 PRO N H sing N N 411 PRO CA C sing N N 412 PRO CA CB sing N N 413 PRO CA HA sing N N 414 PRO C O doub N N 415 PRO C OXT sing N N 416 PRO CB CG sing N N 417 PRO CB HB2 sing N N 418 PRO CB HB3 sing N N 419 PRO CG CD sing N N 420 PRO CG HG2 sing N N 421 PRO CG HG3 sing N N 422 PRO CD HD2 sing N N 423 PRO CD HD3 sing N N 424 PRO OXT HXT sing N N 425 SER N CA sing N N 426 SER N H sing N N 427 SER N H2 sing N N 428 SER CA C sing N N 429 SER CA CB sing N N 430 SER CA HA sing N N 431 SER C O doub N N 432 SER C OXT sing N N 433 SER CB OG sing N N 434 SER CB HB2 sing N N 435 SER CB HB3 sing N N 436 SER OG HG sing N N 437 SER OXT HXT sing N N 438 THR N CA sing N N 439 THR N H sing N N 440 THR N H2 sing N N 441 THR CA C sing N N 442 THR CA CB sing N N 443 THR CA HA sing N N 444 THR C O doub N N 445 THR C OXT sing N N 446 THR CB OG1 sing N N 447 THR CB CG2 sing N N 448 THR CB HB sing N N 449 THR OG1 HG1 sing N N 450 THR CG2 HG21 sing N N 451 THR CG2 HG22 sing N N 452 THR CG2 HG23 sing N N 453 THR OXT HXT sing N N 454 TRP N CA sing N N 455 TRP N H sing N N 456 TRP N H2 sing N N 457 TRP CA C sing N N 458 TRP CA CB sing N N 459 TRP CA HA sing N N 460 TRP C O doub N N 461 TRP C OXT sing N N 462 TRP CB CG sing N N 463 TRP CB HB2 sing N N 464 TRP CB HB3 sing N N 465 TRP CG CD1 doub Y N 466 TRP CG CD2 sing Y N 467 TRP CD1 NE1 sing Y N 468 TRP CD1 HD1 sing N N 469 TRP CD2 CE2 doub Y N 470 TRP CD2 CE3 sing Y N 471 TRP NE1 CE2 sing Y N 472 TRP NE1 HE1 sing N N 473 TRP CE2 CZ2 sing Y N 474 TRP CE3 CZ3 doub Y N 475 TRP CE3 HE3 sing N N 476 TRP CZ2 CH2 doub Y N 477 TRP CZ2 HZ2 sing N N 478 TRP CZ3 CH2 sing Y N 479 TRP CZ3 HZ3 sing N N 480 TRP CH2 HH2 sing N N 481 TRP OXT HXT sing N N 482 TYR N CA sing N N 483 TYR N H sing N N 484 TYR N H2 sing N N 485 TYR CA C sing N N 486 TYR CA CB sing N N 487 TYR CA HA sing N N 488 TYR C O doub N N 489 TYR C OXT sing N N 490 TYR CB CG sing N N 491 TYR CB HB2 sing N N 492 TYR CB HB3 sing N N 493 TYR CG CD1 doub Y N 494 TYR CG CD2 sing Y N 495 TYR CD1 CE1 sing Y N 496 TYR CD1 HD1 sing N N 497 TYR CD2 CE2 doub Y N 498 TYR CD2 HD2 sing N N 499 TYR CE1 CZ doub Y N 500 TYR CE1 HE1 sing N N 501 TYR CE2 CZ sing Y N 502 TYR CE2 HE2 sing N N 503 TYR CZ OH sing N N 504 TYR OH HH sing N N 505 TYR OXT HXT sing N N 506 VAL N CA sing N N 507 VAL N H sing N N 508 VAL N H2 sing N N 509 VAL CA C sing N N 510 VAL CA CB sing N N 511 VAL CA HA sing N N 512 VAL C O doub N N 513 VAL C OXT sing N N 514 VAL CB CG1 sing N N 515 VAL CB CG2 sing N N 516 VAL CB HB sing N N 517 VAL CG1 HG11 sing N N 518 VAL CG1 HG12 sing N N 519 VAL CG1 HG13 sing N N 520 VAL CG2 HG21 sing N N 521 VAL CG2 HG22 sing N N 522 VAL CG2 HG23 sing N N 523 VAL OXT HXT sing N N 524 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1RH6 'double helix' 1RH6 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DT 2 1_555 B DA 14 1_555 0.598 -0.747 1.587 39.548 12.826 -6.288 1 C_DT2:DA29_D C 2 ? D 29 ? 20 1 1 A DA 3 1_555 B DT 13 1_555 0.552 -0.235 -0.559 -15.249 -11.416 -9.439 2 C_DA3:DT28_D C 3 ? D 28 ? 20 1 1 A DT 4 1_555 B DA 12 1_555 -0.073 0.011 0.206 -1.246 -14.169 4.267 3 C_DT4:DA27_D C 4 ? D 27 ? 20 1 1 A DG 5 1_555 B DC 11 1_555 -0.289 -0.011 0.011 -8.784 -8.784 1.072 4 C_DG5:DC26_D C 5 ? D 26 ? 19 1 1 A DT 6 1_555 B DA 10 1_555 -0.193 -0.057 -0.285 -4.027 -7.355 -2.206 5 C_DT6:DA25_D C 6 ? D 25 ? 20 1 1 A DA 7 1_555 B DT 9 1_555 -0.153 -0.238 0.198 1.621 -14.484 6.220 6 C_DA7:DT24_D C 7 ? D 24 ? 20 1 1 A DG 8 1_555 B DC 8 1_555 -0.119 -0.115 0.227 -5.676 -15.083 -4.966 7 C_DG8:DC23_D C 8 ? D 23 ? 19 1 1 A DT 9 1_555 B DA 7 1_555 -0.074 -0.008 0.071 0.624 -10.125 0.557 8 C_DT9:DA22_D C 9 ? D 22 ? 20 1 1 A DC 10 1_555 B DG 6 1_555 0.221 -0.106 0.093 -0.945 -14.312 0.852 9 C_DC10:DG21_D C 10 ? D 21 ? 19 1 1 A DT 11 1_555 B DA 5 1_555 -0.040 -0.153 -0.012 -2.869 -4.604 -3.147 10 C_DT11:DA20_D C 11 ? D 20 ? 20 1 1 A DG 12 1_555 B DC 4 1_555 -0.243 -0.133 -0.006 -1.695 -11.041 1.254 11 C_DG12:DC19_D C 12 ? D 19 ? 19 1 1 A DT 13 1_555 B DA 3 1_555 -0.261 -0.106 -0.035 -1.572 -12.526 2.354 12 C_DT13:DA18_D C 13 ? D 18 ? 20 1 1 A DT 14 1_555 B DA 2 1_555 -0.082 -0.173 -0.085 -5.185 -14.380 3.895 13 C_DT14:DA17_D C 14 ? D 17 ? 20 1 1 A DG 15 1_555 B DC 1 1_555 -0.046 -0.135 0.094 9.162 -5.201 1.128 14 C_DG15:DC16_D C 15 ? D 16 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DT 2 1_555 B DA 14 1_555 A DA 3 1_555 B DT 13 1_555 -0.115 -1.279 4.728 25.588 12.880 39.870 -2.936 2.895 3.524 16.558 -32.896 48.752 1 CC_DT2DA3:DT28DA29_DD C 2 ? D 29 ? C 3 ? D 28 ? 1 A DA 3 1_555 B DT 13 1_555 A DT 4 1_555 B DA 12 1_555 0.100 -0.774 2.950 -6.474 -1.107 19.099 -1.751 -2.965 2.803 -3.217 18.806 20.187 2 CC_DA3DT4:DA27DT28_DD C 3 ? D 28 ? C 4 ? D 27 ? 1 A DT 4 1_555 B DA 12 1_555 A DG 5 1_555 B DC 11 1_555 -0.252 -0.453 3.340 -0.848 5.978 36.248 -1.544 0.283 3.232 9.527 1.351 36.730 3 CC_DT4DG5:DC26DA27_DD C 4 ? D 27 ? C 5 ? D 26 ? 1 A DG 5 1_555 B DC 11 1_555 A DT 6 1_555 B DA 10 1_555 -0.847 -0.582 3.080 2.187 4.707 31.125 -1.877 1.933 2.898 8.696 -4.040 31.544 4 CC_DG5DT6:DA25DC26_DD C 5 ? D 26 ? C 6 ? D 25 ? 1 A DT 6 1_555 B DA 10 1_555 A DA 7 1_555 B DT 9 1_555 0.812 0.824 3.227 -6.420 8.645 31.730 0.008 -2.467 3.120 15.271 11.340 33.462 5 CC_DT6DA7:DT24DA25_DD C 6 ? D 25 ? C 7 ? D 24 ? 1 A DA 7 1_555 B DT 9 1_555 A DG 8 1_555 B DC 8 1_555 -0.837 -0.683 3.366 -5.454 4.940 36.613 -1.743 0.563 3.335 7.767 8.575 37.321 6 CC_DA7DG8:DC23DT24_DD C 7 ? D 24 ? C 8 ? D 23 ? 1 A DG 8 1_555 B DC 8 1_555 A DT 9 1_555 B DA 7 1_555 -0.725 -0.915 3.101 2.766 4.695 27.577 -2.893 2.089 2.825 9.729 -5.732 28.100 7 CC_DG8DT9:DA22DC23_DD C 8 ? D 23 ? C 9 ? D 22 ? 1 A DT 9 1_555 B DA 7 1_555 A DC 10 1_555 B DG 6 1_555 0.688 -0.551 3.280 0.500 1.974 39.313 -1.052 -0.963 3.258 2.932 -0.743 39.363 8 CC_DT9DC10:DG21DA22_DD C 9 ? D 22 ? C 10 ? D 21 ? 1 A DC 10 1_555 B DG 6 1_555 A DT 11 1_555 B DA 5 1_555 -0.725 -0.717 3.399 1.989 4.252 29.039 -2.338 1.862 3.208 8.410 -3.935 29.408 9 CC_DC10DT11:DA20DG21_DD C 10 ? D 21 ? C 11 ? D 20 ? 1 A DT 11 1_555 B DA 5 1_555 A DG 12 1_555 B DC 4 1_555 0.119 0.456 3.288 -1.059 7.413 37.377 -0.258 -0.319 3.311 11.427 1.632 38.093 10 CC_DT11DG12:DC19DA20_DD C 11 ? D 20 ? C 12 ? D 19 ? 1 A DG 12 1_555 B DC 4 1_555 A DT 13 1_555 B DA 3 1_555 -0.193 -0.434 3.277 0.360 0.116 35.548 -0.728 0.369 3.274 0.189 -0.589 35.550 11 CC_DG12DT13:DA18DC19_DD C 12 ? D 19 ? C 13 ? D 18 ? 1 A DT 13 1_555 B DA 3 1_555 A DT 14 1_555 B DA 2 1_555 0.419 0.024 3.273 1.632 -0.010 37.292 0.040 -0.438 3.288 -0.016 -2.551 37.326 12 CC_DT13DT14:DA17DA18_DD C 13 ? D 18 ? C 14 ? D 17 ? 1 A DT 14 1_555 B DA 2 1_555 A DG 15 1_555 B DC 1 1_555 0.408 1.273 3.056 1.154 7.744 36.302 0.989 -0.490 3.260 12.254 -1.827 37.109 13 CC_DT14DG15:DC16DA17_DD C 14 ? D 17 ? C 15 ? D 16 ? # _atom_sites.entry_id 1RH6 _atom_sites.fract_transf_matrix[1][1] 0.012466 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.003134 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013757 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.026575 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_