data_1SDR # _entry.id 1SDR # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.386 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1SDR pdb_00001sdr 10.2210/pdb1sdr/pdb RCSB ARL062 ? ? WWPDB D_1000176335 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1995-02-27 2 'Structure model' 1 1 2008-05-22 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1SDR _pdbx_database_status.recvd_initial_deposition_date 1994-12-11 _pdbx_database_status.deposit_site BNL _pdbx_database_status.process_site BNL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Schindelin, H.' 1 'Zhang, M.' 2 'Bald, R.' 3 'Fuerste, J.-P.' 4 'Erdmann, V.A.' 5 'Heinemann, U.' 6 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Crystal structure of an RNA dodecamer containing the Escherichia coli Shine-Dalgarno sequence.' J.Mol.Biol. 249 595 603 1995 JMOBAK UK 0022-2836 0070 ? 7540215 10.1006/jmbi.1995.0321 1 'A Single Base Change in the Shine-Dalgarno Region of 16s RRNA of Escherichia Coli Affects Translation of Many Proteins' Proc.Natl.Acad.Sci.USA 84 4757 ? 1987 PNASA6 US 0027-8424 0040 ? ? ? 2 ;Specialized Ribosome Systems: Preferential Translation of a Single MRNA Species by a Subpopulation of Mutated Ribosomes in Escherichia Coli ; Proc.Natl.Acad.Sci.USA 84 4762 ? 1987 PNASA6 US 0027-8424 0040 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Schindelin, H.' 1 ? primary 'Zhang, M.' 2 ? primary 'Bald, R.' 3 ? primary 'Furste, J.P.' 4 ? primary 'Erdmann, V.A.' 5 ? primary 'Heinemann, U.' 6 ? 1 'Jacobs, W.F.' 7 ? 1 'Santer, M.' 8 ? 1 'Dahlberg, A.E.' 9 ? 2 'Hui, A.' 10 ? 2 'De Boer, H.A.' 11 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;RNA (5'-R(*UP*AP*AP*GP*GP*AP*GP*GP*UP*GP*AP*U)-3') ; 3916.392 2 ? ? ? ? 2 polymer syn ;RNA (5'-R(*AP*UP*CP*AP*CP*CP*UP*CP*CP*UP*UP*A)-3') ; 3693.232 2 ? ? ? ? 3 water nat water 18.015 39 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no UAAGGAGGUGAU UAAGGAGGUGAU A,C ? 2 polyribonucleotide no no AUCACCUCCUUA AUCACCUCCUUA B,D ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 U n 1 2 A n 1 3 A n 1 4 G n 1 5 G n 1 6 A n 1 7 G n 1 8 G n 1 9 U n 1 10 G n 1 11 A n 1 12 U n 2 1 A n 2 2 U n 2 3 C n 2 4 A n 2 5 C n 2 6 C n 2 7 U n 2 8 C n 2 9 C n 2 10 U n 2 11 U n 2 12 A n # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 HOH non-polymer . WATER ? 'H2 O' 18.015 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 U 1 1 1 U U A . n A 1 2 A 2 2 2 A A A . n A 1 3 A 3 3 3 A A A . n A 1 4 G 4 4 4 G G A . n A 1 5 G 5 5 5 G G A . n A 1 6 A 6 6 6 A A A . n A 1 7 G 7 7 7 G G A . n A 1 8 G 8 8 8 G G A . n A 1 9 U 9 9 9 U U A . n A 1 10 G 10 10 10 G G A . n A 1 11 A 11 11 11 A A A . n A 1 12 U 12 12 12 U U A . n B 2 1 A 1 13 13 A A B . n B 2 2 U 2 14 14 U U B . n B 2 3 C 3 15 15 C C B . n B 2 4 A 4 16 16 A A B . n B 2 5 C 5 17 17 C C B . n B 2 6 C 6 18 18 C C B . n B 2 7 U 7 19 19 U U B . n B 2 8 C 8 20 20 C C B . n B 2 9 C 9 21 21 C C B . n B 2 10 U 10 22 22 U U B . n B 2 11 U 11 23 23 U U B . n B 2 12 A 12 24 24 A A B . n C 1 1 U 1 25 25 U U C . n C 1 2 A 2 26 26 A A C . n C 1 3 A 3 27 27 A A C . n C 1 4 G 4 28 28 G G C . n C 1 5 G 5 29 29 G G C . n C 1 6 A 6 30 30 A A C . n C 1 7 G 7 31 31 G G C . n C 1 8 G 8 32 32 G G C . n C 1 9 U 9 33 33 U U C . n C 1 10 G 10 34 34 G G C . n C 1 11 A 11 35 35 A A C . n C 1 12 U 12 36 36 U U C . n D 2 1 A 1 37 37 A A D . n D 2 2 U 2 38 38 U U D . n D 2 3 C 3 39 39 C C D . n D 2 4 A 4 40 40 A A D . n D 2 5 C 5 41 41 C C D . n D 2 6 C 6 42 42 C C D . n D 2 7 U 7 43 43 U U D . n D 2 8 C 8 44 44 C C D . n D 2 9 C 9 45 45 C C D . n D 2 10 U 10 46 46 U U D . n D 2 11 U 11 47 47 U U D . n D 2 12 A 12 48 48 A A D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 HOH 1 49 49 HOH HOH A . E 3 HOH 2 62 62 HOH HOH A . E 3 HOH 3 65 65 HOH HOH A . E 3 HOH 4 69 69 HOH HOH A . E 3 HOH 5 72 72 HOH HOH A . E 3 HOH 6 82 82 HOH HOH A . E 3 HOH 7 83 83 HOH HOH A . F 3 HOH 1 50 50 HOH HOH B . F 3 HOH 2 52 52 HOH HOH B . F 3 HOH 3 57 57 HOH HOH B . F 3 HOH 4 58 58 HOH HOH B . F 3 HOH 5 64 64 HOH HOH B . F 3 HOH 6 67 67 HOH HOH B . F 3 HOH 7 68 68 HOH HOH B . F 3 HOH 8 71 71 HOH HOH B . F 3 HOH 9 74 74 HOH HOH B . F 3 HOH 10 79 79 HOH HOH B . F 3 HOH 11 81 81 HOH HOH B . F 3 HOH 12 87 87 HOH HOH B . G 3 HOH 1 53 53 HOH HOH C . G 3 HOH 2 54 54 HOH HOH C . G 3 HOH 3 55 55 HOH HOH C . G 3 HOH 4 56 56 HOH HOH C . G 3 HOH 5 59 59 HOH HOH C . G 3 HOH 6 60 60 HOH HOH C . G 3 HOH 7 66 66 HOH HOH C . G 3 HOH 8 75 75 HOH HOH C . G 3 HOH 9 77 77 HOH HOH C . G 3 HOH 10 78 78 HOH HOH C . G 3 HOH 11 80 80 HOH HOH C . G 3 HOH 12 84 84 HOH HOH C . G 3 HOH 13 85 85 HOH HOH C . H 3 HOH 1 51 51 HOH HOH D . H 3 HOH 2 61 61 HOH HOH D . H 3 HOH 3 63 63 HOH HOH D . H 3 HOH 4 70 70 HOH HOH D . H 3 HOH 5 73 73 HOH HOH D . H 3 HOH 6 76 76 HOH HOH D . H 3 HOH 7 86 86 HOH HOH D . # _software.name X-PLOR _software.classification refinement _software.version . _software.citation_id ? _software.pdbx_ordinal 1 # _cell.entry_id 1SDR _cell.length_a 27.690 _cell.length_b 30.900 _cell.length_c 41.980 _cell.angle_alpha 90.92 _cell.angle_beta 103.63 _cell.angle_gamma 113.81 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1SDR _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # _exptl.entry_id 1SDR _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.95 _exptl_crystal.density_percent_sol 36.9000 _exptl_crystal.description ? # _diffrn.id 1 _diffrn.crystal_id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source ? _diffrn_source.type ? _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1SDR _reflns.observed_criterion_sigma_I 0.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 8.000 _reflns.d_resolution_high 2.600 _reflns.number_obs 3050 _reflns.number_all ? _reflns.percent_possible_obs 83.600 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 1SDR _refine.ls_number_reflns_obs 2957 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 8.000 _refine.ls_d_res_high 2.600 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.1950000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1950000 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 13.85 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 1006 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 39 _refine_hist.number_atoms_total 1045 _refine_hist.d_res_high 2.600 _refine_hist.d_res_low 8.000 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.019 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 2.82 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d 28.7 ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _struct_ncs_oper.id 1 _struct_ncs_oper.code given _struct_ncs_oper.details ? _struct_ncs_oper.matrix[1][1] 0.728590 _struct_ncs_oper.matrix[1][2] -0.123710 _struct_ncs_oper.matrix[1][3] -0.673680 _struct_ncs_oper.matrix[2][1] 0.093910 _struct_ncs_oper.matrix[2][2] -0.956220 _struct_ncs_oper.matrix[2][3] 0.277170 _struct_ncs_oper.matrix[3][1] -0.678480 _struct_ncs_oper.matrix[3][2] -0.265210 _struct_ncs_oper.matrix[3][3] -0.685080 _struct_ncs_oper.vector[1] 9.00667 _struct_ncs_oper.vector[2] -8.99483 _struct_ncs_oper.vector[3] 17.76623 # _database_PDB_matrix.entry_id 1SDR _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1SDR _struct.title 'CRYSTAL STRUCTURE OF AN RNA DODECAMER CONTAINING THE ESCHERICHIA COLI SHINE-DALGARNO SEQUENCE' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1SDR _struct_keywords.pdbx_keywords RNA _struct_keywords.text 'A-RNA, DOUBLE HELIX, RNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 1 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? # loop_ _struct_ref.id _struct_ref.entity_id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 1 PDB 1SDR 1SDR ? ? ? 2 2 PDB 1SDR 1SDR ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1SDR A 1 ? 12 ? 1SDR 1 ? 12 ? 1 12 2 2 1SDR B 1 ? 12 ? 1SDR 13 ? 24 ? 13 24 3 1 1SDR C 1 ? 12 ? 1SDR 25 ? 36 ? 25 36 4 2 1SDR D 1 ? 12 ? 1SDR 37 ? 48 ? 37 48 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? dimeric 2 2 author_defined_assembly ? dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,E,F 2 1 C,D,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_biol.id 1 2 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A U 1 N3 ? ? ? 1_555 B A 12 N1 ? ? A U 1 B A 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A U 1 O4 ? ? ? 1_555 B A 12 N6 ? ? A U 1 B A 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A A 2 N1 ? ? ? 1_555 B U 11 N3 ? ? A A 2 B U 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A A 2 N6 ? ? ? 1_555 B U 11 O4 ? ? A A 2 B U 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A A 3 N1 ? ? ? 1_555 B U 10 N3 ? ? A A 3 B U 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A A 3 N6 ? ? ? 1_555 B U 10 O4 ? ? A A 3 B U 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A G 4 N1 ? ? ? 1_555 B C 9 N3 ? ? A G 4 B C 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A G 4 N2 ? ? ? 1_555 B C 9 O2 ? ? A G 4 B C 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A G 4 O6 ? ? ? 1_555 B C 9 N4 ? ? A G 4 B C 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A G 5 N1 ? ? ? 1_555 B C 8 N3 ? ? A G 5 B C 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A G 5 N2 ? ? ? 1_555 B C 8 O2 ? ? A G 5 B C 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A G 5 O6 ? ? ? 1_555 B C 8 N4 ? ? A G 5 B C 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A A 6 N1 ? ? ? 1_555 B U 7 N3 ? ? A A 6 B U 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A A 6 N6 ? ? ? 1_555 B U 7 O4 ? ? A A 6 B U 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A G 7 N1 ? ? ? 1_555 B C 6 N3 ? ? A G 7 B C 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A G 7 N2 ? ? ? 1_555 B C 6 O2 ? ? A G 7 B C 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A G 7 O6 ? ? ? 1_555 B C 6 N4 ? ? A G 7 B C 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A G 8 N1 ? ? ? 1_555 B C 5 N3 ? ? A G 8 B C 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A G 8 N2 ? ? ? 1_555 B C 5 O2 ? ? A G 8 B C 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A G 8 O6 ? ? ? 1_555 B C 5 N4 ? ? A G 8 B C 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A U 9 N3 ? ? ? 1_555 B A 4 N1 ? ? A U 9 B A 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A U 9 O4 ? ? ? 1_555 B A 4 N6 ? ? A U 9 B A 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A G 10 N1 ? ? ? 1_555 B C 3 N3 ? ? A G 10 B C 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A G 10 N2 ? ? ? 1_555 B C 3 O2 ? ? A G 10 B C 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A G 10 O6 ? ? ? 1_555 B C 3 N4 ? ? A G 10 B C 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A A 11 N1 ? ? ? 1_555 B U 2 N3 ? ? A A 11 B U 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A A 11 N6 ? ? ? 1_555 B U 2 O4 ? ? A A 11 B U 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A U 12 N3 ? ? ? 1_555 B A 1 N1 ? ? A U 12 B A 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A U 12 O4 ? ? ? 1_555 B A 1 N6 ? ? A U 12 B A 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C U 1 N3 ? ? ? 1_555 D A 12 N1 ? ? C U 25 D A 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C U 1 O4 ? ? ? 1_555 D A 12 N6 ? ? C U 25 D A 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C A 2 N1 ? ? ? 1_555 D U 11 N3 ? ? C A 26 D U 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C A 2 N6 ? ? ? 1_555 D U 11 O4 ? ? C A 26 D U 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C A 3 N1 ? ? ? 1_555 D U 10 N3 ? ? C A 27 D U 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C A 3 N6 ? ? ? 1_555 D U 10 O4 ? ? C A 27 D U 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C G 4 N1 ? ? ? 1_555 D C 9 N3 ? ? C G 28 D C 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? C G 4 N2 ? ? ? 1_555 D C 9 O2 ? ? C G 28 D C 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? C G 4 O6 ? ? ? 1_555 D C 9 N4 ? ? C G 28 D C 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? C G 5 N1 ? ? ? 1_555 D C 8 N3 ? ? C G 29 D C 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? C G 5 N2 ? ? ? 1_555 D C 8 O2 ? ? C G 29 D C 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? C G 5 O6 ? ? ? 1_555 D C 8 N4 ? ? C G 29 D C 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? C A 6 N1 ? ? ? 1_555 D U 7 N3 ? ? C A 30 D U 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? C A 6 N6 ? ? ? 1_555 D U 7 O4 ? ? C A 30 D U 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? C G 7 N1 ? ? ? 1_555 D C 6 N3 ? ? C G 31 D C 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? C G 7 N2 ? ? ? 1_555 D C 6 O2 ? ? C G 31 D C 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? C G 7 O6 ? ? ? 1_555 D C 6 N4 ? ? C G 31 D C 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? C G 8 N1 ? ? ? 1_555 D C 5 N3 ? ? C G 32 D C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? C G 8 N2 ? ? ? 1_555 D C 5 O2 ? ? C G 32 D C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? C G 8 O6 ? ? ? 1_555 D C 5 N4 ? ? C G 32 D C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? C U 9 N3 ? ? ? 1_555 D A 4 N1 ? ? C U 33 D A 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? C U 9 O4 ? ? ? 1_555 D A 4 N6 ? ? C U 33 D A 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? C G 10 N1 ? ? ? 1_555 D C 3 N3 ? ? C G 34 D C 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? C G 10 N2 ? ? ? 1_555 D C 3 O2 ? ? C G 34 D C 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? C G 10 O6 ? ? ? 1_555 D C 3 N4 ? ? C G 34 D C 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? C A 11 N1 ? ? ? 1_555 D U 2 N3 ? ? C A 35 D U 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? C A 11 N6 ? ? ? 1_555 D U 2 O4 ? ? C A 35 D U 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? C U 12 N3 ? ? ? 1_555 D A 1 N1 ? ? C U 36 D A 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? C U 12 O4 ? ? ? 1_555 D A 1 N6 ? ? C U 36 D A 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "C2'" A A 6 ? ? "C1'" A A 6 ? ? 1.478 1.526 -0.048 0.008 N 2 1 "C5'" A U 9 ? ? "C4'" A U 9 ? ? 1.583 1.509 0.074 0.012 N 3 1 "C2'" A U 12 ? ? "C1'" A U 12 ? ? 1.472 1.526 -0.054 0.008 N 4 1 P B U 14 ? ? "O5'" B U 14 ? ? 1.657 1.593 0.064 0.010 N 5 1 "C2'" B U 14 ? ? "C1'" B U 14 ? ? 1.477 1.526 -0.049 0.008 N 6 1 "C2'" C U 36 ? ? "C1'" C U 36 ? ? 1.473 1.526 -0.053 0.008 N 7 1 "C4'" D U 47 ? ? "C3'" D U 47 ? ? 1.454 1.521 -0.067 0.010 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C3'" A A 2 ? ? "O3'" A A 2 ? ? P A A 3 ? ? 127.54 119.70 7.84 1.20 Y 2 1 "C3'" A A 3 ? ? "C2'" A A 3 ? ? "C1'" A A 3 ? ? 96.59 101.30 -4.71 0.70 N 3 1 "O4'" A G 5 ? ? "C1'" A G 5 ? ? N9 A G 5 ? ? 114.30 108.50 5.80 0.70 N 4 1 N1 A G 5 ? ? C6 A G 5 ? ? O6 A G 5 ? ? 124.08 119.90 4.18 0.60 N 5 1 C5 A G 5 ? ? C6 A G 5 ? ? O6 A G 5 ? ? 124.98 128.60 -3.62 0.60 N 6 1 "O4'" A G 7 ? ? "C1'" A G 7 ? ? N9 A G 7 ? ? 114.16 108.50 5.66 0.70 N 7 1 C5 A G 7 ? ? C6 A G 7 ? ? O6 A G 7 ? ? 124.86 128.60 -3.74 0.60 N 8 1 P A U 9 ? ? "O5'" A U 9 ? ? "C5'" A U 9 ? ? 132.27 120.90 11.37 1.60 N 9 1 "O4'" A A 11 ? ? "C1'" A A 11 ? ? N9 A A 11 ? ? 115.81 108.50 7.31 0.70 N 10 1 "O4'" B U 14 ? ? "C1'" B U 14 ? ? N1 B U 14 ? ? 113.16 108.50 4.66 0.70 N 11 1 "O4'" B C 15 ? ? "C1'" B C 15 ? ? N1 B C 15 ? ? 113.96 108.50 5.46 0.70 N 12 1 "O4'" B C 17 ? ? "C1'" B C 17 ? ? N1 B C 17 ? ? 114.03 108.50 5.53 0.70 N 13 1 "C5'" B C 18 ? ? "C4'" B C 18 ? ? "O4'" B C 18 ? ? 116.87 109.80 7.07 0.90 N 14 1 N1 B C 18 ? ? C2 B C 18 ? ? O2 B C 18 ? ? 123.57 118.90 4.67 0.60 N 15 1 N3 B C 18 ? ? C4 B C 18 ? ? N4 B C 18 ? ? 122.91 118.00 4.91 0.70 N 16 1 C5 B C 18 ? ? C4 B C 18 ? ? N4 B C 18 ? ? 114.39 120.20 -5.81 0.70 N 17 1 "C3'" B U 19 ? ? "O3'" B U 19 ? ? P B C 20 ? ? 128.64 119.70 8.94 1.20 Y 18 1 "O4'" B C 20 ? ? "C1'" B C 20 ? ? N1 B C 20 ? ? 115.71 108.50 7.21 0.70 N 19 1 N1 B C 21 ? ? C2 B C 21 ? ? O2 B C 21 ? ? 123.32 118.90 4.42 0.60 N 20 1 N3 B C 21 ? ? C2 B C 21 ? ? O2 B C 21 ? ? 117.46 121.90 -4.44 0.70 N 21 1 "O4'" B U 22 ? ? "C1'" B U 22 ? ? N1 B U 22 ? ? 116.66 108.50 8.16 0.70 N 22 1 "O4'" C A 27 ? ? "C4'" C A 27 ? ? "C3'" C A 27 ? ? 96.84 104.00 -7.16 1.00 N 23 1 "O4'" C G 28 ? ? "C1'" C G 28 ? ? N9 C G 28 ? ? 112.84 108.50 4.34 0.70 N 24 1 C5 C G 28 ? ? C6 C G 28 ? ? O6 C G 28 ? ? 124.80 128.60 -3.80 0.60 N 25 1 "C3'" C G 29 ? ? "O3'" C G 29 ? ? P C A 30 ? ? 127.59 119.70 7.89 1.20 Y 26 1 "O4'" C U 33 ? ? "C1'" C U 33 ? ? N1 C U 33 ? ? 117.36 108.50 8.86 0.70 N 27 1 "C1'" C G 34 ? ? "O4'" C G 34 ? ? "C4'" C G 34 ? ? 105.12 109.70 -4.58 0.70 N 28 1 "C5'" D A 37 ? ? "C4'" D A 37 ? ? "C3'" D A 37 ? ? 106.18 115.20 -9.02 1.40 N 29 1 "C5'" D C 39 ? ? "C4'" D C 39 ? ? "O4'" D C 39 ? ? 117.77 109.80 7.97 0.90 N 30 1 "C4'" D C 39 ? ? "C3'" D C 39 ? ? "C2'" D C 39 ? ? 94.59 102.60 -8.01 1.00 N 31 1 "O4'" D C 39 ? ? "C1'" D C 39 ? ? N1 D C 39 ? ? 113.63 108.50 5.13 0.70 N 32 1 "C3'" D C 39 ? ? "O3'" D C 39 ? ? P D A 40 ? ? 132.60 119.70 12.90 1.20 Y 33 1 N1 D C 41 ? ? C2 D C 41 ? ? O2 D C 41 ? ? 123.57 118.90 4.67 0.60 N 34 1 N3 D C 41 ? ? C2 D C 41 ? ? O2 D C 41 ? ? 117.43 121.90 -4.47 0.70 N 35 1 "O4'" D C 42 ? ? "C1'" D C 42 ? ? N1 D C 42 ? ? 113.45 108.50 4.95 0.70 N 36 1 N1 D C 42 ? ? C2 D C 42 ? ? O2 D C 42 ? ? 122.56 118.90 3.66 0.60 N 37 1 N3 D C 42 ? ? C2 D C 42 ? ? O2 D C 42 ? ? 117.01 121.90 -4.89 0.70 N 38 1 "O4'" D U 43 ? ? "C1'" D U 43 ? ? N1 D U 43 ? ? 112.87 108.50 4.37 0.70 N 39 1 N3 D U 43 ? ? C2 D U 43 ? ? O2 D U 43 ? ? 117.45 122.20 -4.75 0.70 N 40 1 P D C 44 ? ? "O5'" D C 44 ? ? "C5'" D C 44 ? ? 109.88 120.90 -11.02 1.60 N 41 1 "C4'" D C 44 ? ? "C3'" D C 44 ? ? "C2'" D C 44 ? ? 95.84 102.60 -6.76 1.00 N 42 1 N1 D C 44 ? ? C2 D C 44 ? ? O2 D C 44 ? ? 122.95 118.90 4.05 0.60 N 43 1 "O4'" D U 46 ? ? "C4'" D U 46 ? ? "C3'" D U 46 ? ? 97.26 104.00 -6.74 1.00 N 44 1 "O4'" D U 47 ? ? "C1'" D U 47 ? ? N1 D U 47 ? ? 115.67 108.50 7.17 0.70 N 45 1 N3 D U 47 ? ? C2 D U 47 ? ? O2 D U 47 ? ? 117.67 122.20 -4.53 0.70 N 46 1 N1 D A 48 ? ? C6 D A 48 ? ? N6 D A 48 ? ? 122.92 118.60 4.32 0.60 N # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 C OP3 O N N 38 C P P N N 39 C OP1 O N N 40 C OP2 O N N 41 C "O5'" O N N 42 C "C5'" C N N 43 C "C4'" C N R 44 C "O4'" O N N 45 C "C3'" C N S 46 C "O3'" O N N 47 C "C2'" C N R 48 C "O2'" O N N 49 C "C1'" C N R 50 C N1 N N N 51 C C2 C N N 52 C O2 O N N 53 C N3 N N N 54 C C4 C N N 55 C N4 N N N 56 C C5 C N N 57 C C6 C N N 58 C HOP3 H N N 59 C HOP2 H N N 60 C "H5'" H N N 61 C "H5''" H N N 62 C "H4'" H N N 63 C "H3'" H N N 64 C "HO3'" H N N 65 C "H2'" H N N 66 C "HO2'" H N N 67 C "H1'" H N N 68 C H41 H N N 69 C H42 H N N 70 C H5 H N N 71 C H6 H N N 72 G OP3 O N N 73 G P P N N 74 G OP1 O N N 75 G OP2 O N N 76 G "O5'" O N N 77 G "C5'" C N N 78 G "C4'" C N R 79 G "O4'" O N N 80 G "C3'" C N S 81 G "O3'" O N N 82 G "C2'" C N R 83 G "O2'" O N N 84 G "C1'" C N R 85 G N9 N Y N 86 G C8 C Y N 87 G N7 N Y N 88 G C5 C Y N 89 G C6 C N N 90 G O6 O N N 91 G N1 N N N 92 G C2 C N N 93 G N2 N N N 94 G N3 N N N 95 G C4 C Y N 96 G HOP3 H N N 97 G HOP2 H N N 98 G "H5'" H N N 99 G "H5''" H N N 100 G "H4'" H N N 101 G "H3'" H N N 102 G "HO3'" H N N 103 G "H2'" H N N 104 G "HO2'" H N N 105 G "H1'" H N N 106 G H8 H N N 107 G H1 H N N 108 G H21 H N N 109 G H22 H N N 110 HOH O O N N 111 HOH H1 H N N 112 HOH H2 H N N 113 U OP3 O N N 114 U P P N N 115 U OP1 O N N 116 U OP2 O N N 117 U "O5'" O N N 118 U "C5'" C N N 119 U "C4'" C N R 120 U "O4'" O N N 121 U "C3'" C N S 122 U "O3'" O N N 123 U "C2'" C N R 124 U "O2'" O N N 125 U "C1'" C N R 126 U N1 N N N 127 U C2 C N N 128 U O2 O N N 129 U N3 N N N 130 U C4 C N N 131 U O4 O N N 132 U C5 C N N 133 U C6 C N N 134 U HOP3 H N N 135 U HOP2 H N N 136 U "H5'" H N N 137 U "H5''" H N N 138 U "H4'" H N N 139 U "H3'" H N N 140 U "HO3'" H N N 141 U "H2'" H N N 142 U "HO2'" H N N 143 U "H1'" H N N 144 U H3 H N N 145 U H5 H N N 146 U H6 H N N 147 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 C OP3 P sing N N 40 C OP3 HOP3 sing N N 41 C P OP1 doub N N 42 C P OP2 sing N N 43 C P "O5'" sing N N 44 C OP2 HOP2 sing N N 45 C "O5'" "C5'" sing N N 46 C "C5'" "C4'" sing N N 47 C "C5'" "H5'" sing N N 48 C "C5'" "H5''" sing N N 49 C "C4'" "O4'" sing N N 50 C "C4'" "C3'" sing N N 51 C "C4'" "H4'" sing N N 52 C "O4'" "C1'" sing N N 53 C "C3'" "O3'" sing N N 54 C "C3'" "C2'" sing N N 55 C "C3'" "H3'" sing N N 56 C "O3'" "HO3'" sing N N 57 C "C2'" "O2'" sing N N 58 C "C2'" "C1'" sing N N 59 C "C2'" "H2'" sing N N 60 C "O2'" "HO2'" sing N N 61 C "C1'" N1 sing N N 62 C "C1'" "H1'" sing N N 63 C N1 C2 sing N N 64 C N1 C6 sing N N 65 C C2 O2 doub N N 66 C C2 N3 sing N N 67 C N3 C4 doub N N 68 C C4 N4 sing N N 69 C C4 C5 sing N N 70 C N4 H41 sing N N 71 C N4 H42 sing N N 72 C C5 C6 doub N N 73 C C5 H5 sing N N 74 C C6 H6 sing N N 75 G OP3 P sing N N 76 G OP3 HOP3 sing N N 77 G P OP1 doub N N 78 G P OP2 sing N N 79 G P "O5'" sing N N 80 G OP2 HOP2 sing N N 81 G "O5'" "C5'" sing N N 82 G "C5'" "C4'" sing N N 83 G "C5'" "H5'" sing N N 84 G "C5'" "H5''" sing N N 85 G "C4'" "O4'" sing N N 86 G "C4'" "C3'" sing N N 87 G "C4'" "H4'" sing N N 88 G "O4'" "C1'" sing N N 89 G "C3'" "O3'" sing N N 90 G "C3'" "C2'" sing N N 91 G "C3'" "H3'" sing N N 92 G "O3'" "HO3'" sing N N 93 G "C2'" "O2'" sing N N 94 G "C2'" "C1'" sing N N 95 G "C2'" "H2'" sing N N 96 G "O2'" "HO2'" sing N N 97 G "C1'" N9 sing N N 98 G "C1'" "H1'" sing N N 99 G N9 C8 sing Y N 100 G N9 C4 sing Y N 101 G C8 N7 doub Y N 102 G C8 H8 sing N N 103 G N7 C5 sing Y N 104 G C5 C6 sing N N 105 G C5 C4 doub Y N 106 G C6 O6 doub N N 107 G C6 N1 sing N N 108 G N1 C2 sing N N 109 G N1 H1 sing N N 110 G C2 N2 sing N N 111 G C2 N3 doub N N 112 G N2 H21 sing N N 113 G N2 H22 sing N N 114 G N3 C4 sing N N 115 HOH O H1 sing N N 116 HOH O H2 sing N N 117 U OP3 P sing N N 118 U OP3 HOP3 sing N N 119 U P OP1 doub N N 120 U P OP2 sing N N 121 U P "O5'" sing N N 122 U OP2 HOP2 sing N N 123 U "O5'" "C5'" sing N N 124 U "C5'" "C4'" sing N N 125 U "C5'" "H5'" sing N N 126 U "C5'" "H5''" sing N N 127 U "C4'" "O4'" sing N N 128 U "C4'" "C3'" sing N N 129 U "C4'" "H4'" sing N N 130 U "O4'" "C1'" sing N N 131 U "C3'" "O3'" sing N N 132 U "C3'" "C2'" sing N N 133 U "C3'" "H3'" sing N N 134 U "O3'" "HO3'" sing N N 135 U "C2'" "O2'" sing N N 136 U "C2'" "C1'" sing N N 137 U "C2'" "H2'" sing N N 138 U "O2'" "HO2'" sing N N 139 U "C1'" N1 sing N N 140 U "C1'" "H1'" sing N N 141 U N1 C2 sing N N 142 U N1 C6 sing N N 143 U C2 O2 doub N N 144 U C2 N3 sing N N 145 U N3 C4 sing N N 146 U N3 H3 sing N N 147 U C4 O4 doub N N 148 U C4 C5 sing N N 149 U C5 C6 doub N N 150 U C5 H5 sing N N 151 U C6 H6 sing N N 152 # _ndb_struct_conf_na.entry_id 1SDR _ndb_struct_conf_na.feature 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A U 1 1_555 B A 12 1_555 0.083 -0.293 -0.115 -9.992 -8.698 -2.005 1 A_U1:A24_B A 1 ? B 24 ? 20 1 1 A A 2 1_555 B U 11 1_555 0.479 -0.485 -0.253 0.811 -9.907 -1.760 2 A_A2:U23_B A 2 ? B 23 ? 20 1 1 A A 3 1_555 B U 10 1_555 0.500 -0.270 0.438 17.812 -9.339 -4.644 3 A_A3:U22_B A 3 ? B 22 ? 20 1 1 A G 4 1_555 B C 9 1_555 -0.159 -0.467 0.581 10.361 -12.003 -0.937 4 A_G4:C21_B A 4 ? B 21 ? 19 1 1 A G 5 1_555 B C 8 1_555 0.050 -0.391 0.236 -1.363 -10.320 1.273 5 A_G5:C20_B A 5 ? B 20 ? 19 1 1 A A 6 1_555 B U 7 1_555 -0.604 -0.389 0.131 -4.270 -5.463 -6.859 6 A_A6:U19_B A 6 ? B 19 ? 20 1 1 A G 7 1_555 B C 6 1_555 -0.127 -0.318 -0.261 -8.447 -9.812 -8.469 7 A_G7:C18_B A 7 ? B 18 ? 19 1 1 A G 8 1_555 B C 5 1_555 -0.333 -0.604 0.335 -4.058 -19.478 -4.278 8 A_G8:C17_B A 8 ? B 17 ? 19 1 1 A U 9 1_555 B A 4 1_555 -0.156 -0.437 0.552 -8.544 -11.791 2.712 9 A_U9:A16_B A 9 ? B 16 ? 20 1 1 A G 10 1_555 B C 3 1_555 0.258 -0.296 0.180 -8.094 -9.728 -5.827 10 A_G10:C15_B A 10 ? B 15 ? 19 1 1 A A 11 1_555 B U 2 1_555 0.289 -0.229 0.069 -7.333 -16.115 -9.687 11 A_A11:U14_B A 11 ? B 14 ? 20 1 1 A U 12 1_555 B A 1 1_555 -0.083 -0.350 -0.067 -11.680 -12.881 -8.086 12 A_U12:A13_B A 12 ? B 13 ? 20 1 1 C U 1 1_555 D A 12 1_555 -0.067 -0.364 0.111 1.258 -11.730 -6.056 13 C_U25:A48_D C 25 ? D 48 ? 20 1 1 C A 2 1_555 D U 11 1_555 0.068 -0.211 0.375 1.480 -13.201 -0.276 14 C_A26:U47_D C 26 ? D 47 ? 20 1 1 C A 3 1_555 D U 10 1_555 -0.231 -0.528 0.456 7.316 -11.229 0.756 15 C_A27:U46_D C 27 ? D 46 ? 20 1 1 C G 4 1_555 D C 9 1_555 -0.527 -0.407 0.244 1.844 -11.200 -1.264 16 C_G28:C45_D C 28 ? D 45 ? 19 1 1 C G 5 1_555 D C 8 1_555 0.384 -0.288 0.077 -2.841 -9.968 -5.453 17 C_G29:C44_D C 29 ? D 44 ? 19 1 1 C A 6 1_555 D U 7 1_555 -0.035 -0.339 0.096 -1.191 -3.709 -0.295 18 C_A30:U43_D C 30 ? D 43 ? 20 1 1 C G 7 1_555 D C 6 1_555 0.485 -0.244 0.328 4.417 -8.769 0.734 19 C_G31:C42_D C 31 ? D 42 ? 19 1 1 C G 8 1_555 D C 5 1_555 -0.127 -0.448 0.197 -8.029 -15.643 -4.454 20 C_G32:C41_D C 32 ? D 41 ? 19 1 1 C U 9 1_555 D A 4 1_555 0.284 -0.271 0.464 -14.353 -21.266 -2.500 21 C_U33:A40_D C 33 ? D 40 ? 20 1 1 C G 10 1_555 D C 3 1_555 -0.186 -0.454 0.347 -5.349 -13.186 -7.156 22 C_G34:C39_D C 34 ? D 39 ? 19 1 1 C A 11 1_555 D U 2 1_555 0.131 -0.296 -0.397 -6.972 -15.387 -2.802 23 C_A35:U38_D C 35 ? D 38 ? 20 1 1 C U 12 1_555 D A 1 1_555 0.471 -0.635 -0.076 -5.680 -17.133 1.605 24 C_U36:A37_D C 36 ? D 37 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A U 1 1_555 B A 12 1_555 A A 2 1_555 B U 11 1_555 -0.502 -1.037 3.146 0.234 13.354 27.959 -4.257 0.981 2.407 25.854 -0.453 30.927 1 AA_U1A2:U23A24_BB A 1 ? B 24 ? A 2 ? B 23 ? 1 A A 2 1_555 B U 11 1_555 A A 3 1_555 B U 10 1_555 0.029 -1.225 2.934 -2.531 3.422 32.415 -2.696 -0.436 2.783 6.097 4.510 32.686 2 AA_A2A3:U22U23_BB A 2 ? B 23 ? A 3 ? B 22 ? 1 A A 3 1_555 B U 10 1_555 A G 4 1_555 B C 9 1_555 0.243 -1.737 3.485 1.169 10.389 27.293 -5.647 -0.235 2.666 21.063 -2.371 29.191 3 AA_A3G4:C21U22_BB A 3 ? B 22 ? A 4 ? B 21 ? 1 A G 4 1_555 B C 9 1_555 A G 5 1_555 B C 8 1_555 0.389 -2.029 3.479 1.333 11.705 34.890 -4.764 -0.440 2.695 18.868 -2.148 36.766 4 AA_G4G5:C20C21_BB A 4 ? B 21 ? A 5 ? B 20 ? 1 A G 5 1_555 B C 8 1_555 A A 6 1_555 B U 7 1_555 -0.708 -2.232 3.211 -0.942 13.792 26.864 -6.614 1.201 1.888 27.495 1.878 30.154 5 AA_G5A6:U19C20_BB A 5 ? B 20 ? A 6 ? B 19 ? 1 A A 6 1_555 B U 7 1_555 A G 7 1_555 B C 6 1_555 -0.184 -1.405 3.589 3.059 10.108 34.552 -3.753 0.746 3.045 16.546 -5.007 36.082 6 AA_A6G7:C18U19_BB A 6 ? B 19 ? A 7 ? B 18 ? 1 A G 7 1_555 B C 6 1_555 A G 8 1_555 B C 5 1_555 0.690 -2.004 3.133 -2.981 11.773 28.167 -5.723 -1.794 2.067 22.892 5.796 30.625 7 AA_G7G8:C17C18_BB A 7 ? B 18 ? A 8 ? B 17 ? 1 A G 8 1_555 B C 5 1_555 A U 9 1_555 B A 4 1_555 0.486 -1.438 3.464 -1.171 5.084 34.926 -3.143 -0.979 3.212 8.412 1.937 35.301 8 AA_G8U9:A16C17_BB A 8 ? B 17 ? A 9 ? B 16 ? 1 A U 9 1_555 B A 4 1_555 A G 10 1_555 B C 3 1_555 -0.257 -1.183 3.173 1.925 10.724 35.991 -3.124 0.630 2.706 16.886 -3.031 37.552 9 AA_U9G10:C15A16_BB A 9 ? B 16 ? A 10 ? B 15 ? 1 A G 10 1_555 B C 3 1_555 A A 11 1_555 B U 2 1_555 0.082 -2.135 3.429 4.313 4.718 28.522 -5.257 0.773 3.023 9.426 -8.618 29.215 10 AA_G10A11:U14C15_BB A 10 ? B 15 ? A 11 ? B 14 ? 1 A A 11 1_555 B U 2 1_555 A U 12 1_555 B A 1 1_555 0.121 -1.790 3.440 4.807 7.282 37.490 -3.628 0.417 3.045 11.145 -7.357 38.456 11 AA_A11U12:A13U14_BB A 11 ? B 14 ? A 12 ? B 13 ? 1 C U 1 1_555 D A 12 1_555 C A 2 1_555 D U 11 1_555 0.119 -1.137 3.258 -3.529 10.458 36.274 -3.027 -0.613 2.812 16.338 5.512 37.862 12 CC_U25A26:U47A48_DD C 25 ? D 48 ? C 26 ? D 47 ? 1 C A 2 1_555 D U 11 1_555 C A 3 1_555 D U 10 1_555 -0.239 -1.423 3.136 0.079 6.431 28.651 -4.071 0.488 2.757 12.793 -0.157 29.349 13 CC_A26A27:U46U47_DD C 26 ? D 47 ? C 27 ? D 46 ? 1 C A 3 1_555 D U 10 1_555 C G 4 1_555 D C 9 1_555 -0.506 -1.790 3.302 -1.029 15.249 32.091 -4.945 0.696 2.262 25.834 1.744 35.458 14 CC_A27G28:C45U46_DD C 27 ? D 46 ? C 28 ? D 45 ? 1 C G 4 1_555 D C 9 1_555 C G 5 1_555 D C 8 1_555 -0.296 -1.699 3.423 0.271 9.468 31.856 -4.521 0.562 2.814 16.792 -0.480 33.199 15 CC_G28G29:C44C45_DD C 28 ? D 45 ? C 29 ? D 44 ? 1 C G 5 1_555 D C 8 1_555 C A 6 1_555 D U 7 1_555 0.199 -1.763 3.291 -0.341 8.232 30.278 -4.714 -0.429 2.727 15.405 0.637 31.354 16 CC_G29A30:U43C44_DD C 29 ? D 44 ? C 30 ? D 43 ? 1 C A 6 1_555 D U 7 1_555 C G 7 1_555 D C 6 1_555 -0.129 -1.870 3.103 -1.357 9.510 33.196 -4.438 0.033 2.492 16.227 2.315 34.520 17 CC_A30G31:C42U43_DD C 30 ? D 43 ? C 31 ? D 42 ? 1 C G 7 1_555 D C 6 1_555 C G 8 1_555 D C 5 1_555 -0.231 -2.056 3.446 -0.739 13.771 31.554 -5.482 0.284 2.374 23.943 1.285 34.366 18 CC_G31G32:C41C42_DD C 31 ? D 42 ? C 32 ? D 41 ? 1 C G 8 1_555 D C 5 1_555 C U 9 1_555 D A 4 1_555 0.243 -1.599 3.442 -0.508 6.861 32.270 -3.987 -0.514 3.043 12.171 0.901 32.976 19 CC_G32U33:A40C41_DD C 32 ? D 41 ? C 33 ? D 40 ? 1 C U 9 1_555 D A 4 1_555 C G 10 1_555 D C 3 1_555 0.020 -1.273 2.957 -0.979 10.136 29.445 -4.005 -0.194 2.396 19.231 1.857 31.119 20 CC_U33G34:C39A40_DD C 33 ? D 40 ? C 34 ? D 39 ? 1 C G 10 1_555 D C 3 1_555 C A 11 1_555 D U 2 1_555 0.015 -2.138 3.426 6.093 13.349 27.534 -6.295 1.026 2.142 25.851 -11.799 31.133 21 CC_G34A35:U38C39_DD C 34 ? D 39 ? C 35 ? D 38 ? 1 C A 11 1_555 D U 2 1_555 C U 12 1_555 D A 1 1_555 0.579 -1.414 3.374 -0.293 3.069 38.009 -2.559 -0.924 3.249 4.702 0.448 38.129 22 CC_A35U36:A37U38_DD C 35 ? D 38 ? C 36 ? D 37 ? # _atom_sites.entry_id 1SDR _atom_sites.fract_transf_matrix[1][1] 0.036114 _atom_sites.fract_transf_matrix[1][2] 0.015936 _atom_sites.fract_transf_matrix[1][3] 0.010835 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.035373 _atom_sites.fract_transf_matrix[2][3] 0.004459 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.024705 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P # loop_