data_1SER # _entry.id 1SER # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.386 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1SER pdb_00001ser 10.2210/pdb1ser/pdb RCSB PTR004 ? ? WWPDB D_1000176349 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1994-04-30 2 'Structure model' 1 1 2008-05-22 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-11-29 5 'Structure model' 1 4 2024-02-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' Advisory 4 4 'Structure model' 'Derived calculations' 5 5 'Structure model' Advisory 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Database references' 8 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' pdbx_unobs_or_zero_occ_atoms 2 4 'Structure model' pdbx_unobs_or_zero_occ_residues 3 4 'Structure model' struct_conf 4 4 'Structure model' struct_conf_type 5 5 'Structure model' chem_comp_atom 6 5 'Structure model' chem_comp_bond 7 5 'Structure model' database_2 8 5 'Structure model' pdbx_unobs_or_zero_occ_atoms 9 5 'Structure model' pdbx_unobs_or_zero_occ_residues 10 5 'Structure model' struct_conn 11 5 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_struct_conn.pdbx_dist_value' 4 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 5 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 6 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 7 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 8 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 9 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 10 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 11 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 12 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 13 5 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1SER _pdbx_database_status.recvd_initial_deposition_date 1994-02-21 _pdbx_database_status.deposit_site BNL _pdbx_database_status.process_site BNL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Biou, S.' 1 'Cusack, V.' 2 'Yaremchuk, A.' 3 'Tukalo, M.' 4 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'The 2.9 A crystal structure of T. thermophilus seryl-tRNA synthetase complexed with tRNA(Ser).' Science 263 1404 1410 1994 SCIEAS US 0036-8075 0038 ? 8128220 ? 1 'Crystal Structures at 2.5 Angstroms Resolution of Seryl-tRNA Synthetase Complexed with Two Different Analogues of Seryl-Adenylate' Science 263 1432 1436 1994 SCIEAS US 0036-8075 0038 ? ? ? 2 'Refined Crystal Structure of the Seryl-tRNA Synthetase from Thermus Thermophilus at 2.5 Angstroms Resolution' J.Mol.Biol. 234 222 233 1993 JMOBAK UK 0022-2836 0070 ? ? ? 3 'Crystallization of the Seryl-tRNA Synthetase: TRNA(Ser) Complex of Escherichia Coli' 'FEBS Lett.' 324 167 170 1993 FEBLAL NE 0014-5793 0165 ? ? ? 4 ;A New Crystal Form of the Complex between Seryl-tRNA Synthetase and tRNA(Ser) from Thermus Thermophilus that Diffracts to 2.8 Angstroms Resolution ; 'FEBS Lett.' 310 157 161 1992 FEBLAL NE 0014-5793 0165 ? ? ? 5 'Crystallization of the Seryl-tRNA Synthetase-tRNA(Ser) Complex from Thermus Thermophilus' J.Mol.Biol. 224 519 522 1992 JMOBAK UK 0022-2836 0070 ? ? ? 6 'Sequence, Structural and Evolutionary Relationships between Class 2 Aminoacyl- tRNA Synthetases' 'Nucleic Acids Res.' 19 3489 3498 1991 NARHAD UK 0305-1048 0389 ? ? ? 7 'Seryl-tRNA Synthetase from Escherichia Coli at 2.5 Angstroms Resolution: A Second Class of Synthetase Structure' Nature 347 249 255 1990 NATUAS UK 0028-0836 0006 ? ? ? 8 'Crystals of Seryl-tRNA Synthetase from Thermus Thermophilus. Preliminary Crystallographic Data.' J.Mol.Biol. 213 631 632 1990 JMOBAK UK 0022-2836 0070 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Biou, V.' 1 ? primary 'Yaremchuk, A.' 2 ? primary 'Tukalo, M.' 3 ? primary 'Cusack, S.' 4 ? 1 'Belrhali, H.' 5 ? 1 'Yaremchuk, A.D.' 6 ? 1 'Tukalo, M.A.' 7 ? 1 'Larsen, K.' 8 ? 1 'Berthet-Colominas, C.' 9 ? 1 'Leberman, R.' 10 ? 1 'Beijer, B.' 11 ? 1 'Sproat, B.' 12 ? 1 'Als-Nielsen, J.' 13 ? 1 'Grubel, G.' 14 ? 1 'Legrand, J.-F.' 15 ? 1 'Lehmann, M.' 16 ? 1 'Cusack, S.' 17 ? 2 'Fujinaga, M.' 18 ? 2 'Berthet-Colominas, C.' 19 ? 2 'Yaremchuk, A.D.' 20 ? 2 'Tukalo, M.A.' 21 ? 2 'Cusack, S.' 22 ? 3 'Price, S.' 23 ? 3 'Cusack, S.' 24 ? 3 'Borel, F.' 25 ? 3 'Berthet-Colominas, C.' 26 ? 3 'Leberman, R.' 27 ? 4 'Yaremchuk, A.D.' 28 ? 4 'Tukalo, M.A.' 29 ? 4 'Krikliviy, I.' 30 ? 4 'Malchenko, N.' 31 ? 4 'Biou, V.' 32 ? 4 'Berthet- Colominas, C.' 33 ? 4 'Cusack, S.' 34 ? 5 'Yaremchuk, A.D.' 35 ? 5 'Tukalo, M.A.' 36 ? 5 'Krikliviy, I.' 37 ? 5 ;Mel'nik, V.N. ; 38 ? 5 'Berthet-Colominas, C.' 39 ? 5 'Cusack, S.' 40 ? 5 'Leberman, R.' 41 ? 6 'Cusack, S.' 42 ? 6 'Hartlein, M.' 43 ? 6 'Leberman, R.' 44 ? 7 'Cusack, S.' 45 ? 7 'Berthet-Colominas, C.' 46 ? 7 'Hartlein, M.' 47 ? 7 'Nassar, N.' 48 ? 7 'Leberman, R.' 49 ? 8 'Garber, M.B.' 50 ? 8 'Yaremchuk, A.D.' 51 ? 8 'Tukalo, M.A.' 52 ? 8 'Egorova, S.P.' 53 ? 8 'Berthet-Colominas, C.' 54 ? 8 'Leberman, R.' 55 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat TRNASER 30387.119 1 ? ? ? ? 2 polymer nat 'PROTEIN (SERYL-TRNA SYNTHETASE (E.C.6.1.1.11))' 47878.832 2 ? ? ? ? 3 water nat water 18.015 44 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no yes ;GGAGAGGUGCCCGAGUGGC(H2U)GAAGGGACACGACUGGAAAUCGUGUAGGGGGGCUUAAACCUCCCUCGCGGG(5MU) (PSU)CGAAUCCCGCCCUCUCCGCCA ; ;GGAGAGGUGCCCGAGUGGCUGAAGGGACACGACUGGAAAUCGUGUAGGGGGGCUUAAACCUCCCUCGCGGGUUCGAAUCC CGCCCUCUCCGCCA ; T ? 2 'polypeptide(L)' no no ;MVDLKRLRQEPEVFHRAIREKGVALDLEALLALDREVQELKKRLQEVQTERNQVAKRVPKAPPEEKEALIARGKALGEEA KRLEEALREKEARLEALLLQVPLPPWPGAPVGGEEANREIKRVGGPPEFSFPPLDHVALMEKNGWWEPRISQVSGSRSYA LKGDLALYELALLRFAMDFMARRGFLPMTLPSYAREKAFLGTGHFPAYRDQVWAIAETDLYLTGTAEVVLNALHSGEILP YEALPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDRAFQELLENAEEILRLLELPYRLVEVAT GDMGPGKWRQVDIEVYLPSEGRYRETHSCSALLDWQARRANLRYRDPEGRVRYAYTLNNTALATPRILAMLLENHQLQDG RVRVPQALIPYMGKEVLEPCG ; ;MVDLKRLRQEPEVFHRAIREKGVALDLEALLALDREVQELKKRLQEVQTERNQVAKRVPKAPPEEKEALIARGKALGEEA KRLEEALREKEARLEALLLQVPLPPWPGAPVGGEEANREIKRVGGPPEFSFPPLDHVALMEKNGWWEPRISQVSGSRSYA LKGDLALYELALLRFAMDFMARRGFLPMTLPSYAREKAFLGTGHFPAYRDQVWAIAETDLYLTGTAEVVLNALHSGEILP YEALPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDRAFQELLENAEEILRLLELPYRLVEVAT GDMGPGKWRQVDIEVYLPSEGRYRETHSCSALLDWQARRANLRYRDPEGRVRYAYTLNNTALATPRILAMLLENHQLQDG RVRVPQALIPYMGKEVLEPCG ; A,B ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 G n 1 3 A n 1 4 G n 1 5 A n 1 6 G n 1 7 G n 1 8 U n 1 9 G n 1 10 C n 1 11 C n 1 12 C n 1 13 G n 1 14 A n 1 15 G n 1 16 U n 1 17 G n 1 18 G n 1 19 C n 1 20 H2U n 1 21 G n 1 22 A n 1 23 A n 1 24 G n 1 25 G n 1 26 G n 1 27 A n 1 28 C n 1 29 A n 1 30 C n 1 31 G n 1 32 A n 1 33 C n 1 34 U n 1 35 G n 1 36 G n 1 37 A n 1 38 A n 1 39 A n 1 40 U n 1 41 C n 1 42 G n 1 43 U n 1 44 G n 1 45 U n 1 46 A n 1 47 G n 1 48 G n 1 49 G n 1 50 G n 1 51 G n 1 52 G n 1 53 C n 1 54 U n 1 55 U n 1 56 A n 1 57 A n 1 58 A n 1 59 C n 1 60 C n 1 61 U n 1 62 C n 1 63 C n 1 64 C n 1 65 U n 1 66 C n 1 67 G n 1 68 C n 1 69 G n 1 70 G n 1 71 G n 1 72 5MU n 1 73 PSU n 1 74 C n 1 75 G n 1 76 A n 1 77 A n 1 78 U n 1 79 C n 1 80 C n 1 81 C n 1 82 G n 1 83 C n 1 84 C n 1 85 C n 1 86 U n 1 87 C n 1 88 U n 1 89 C n 1 90 C n 1 91 G n 1 92 C n 1 93 C n 1 94 A n 2 1 MET n 2 2 VAL n 2 3 ASP n 2 4 LEU n 2 5 LYS n 2 6 ARG n 2 7 LEU n 2 8 ARG n 2 9 GLN n 2 10 GLU n 2 11 PRO n 2 12 GLU n 2 13 VAL n 2 14 PHE n 2 15 HIS n 2 16 ARG n 2 17 ALA n 2 18 ILE n 2 19 ARG n 2 20 GLU n 2 21 LYS n 2 22 GLY n 2 23 VAL n 2 24 ALA n 2 25 LEU n 2 26 ASP n 2 27 LEU n 2 28 GLU n 2 29 ALA n 2 30 LEU n 2 31 LEU n 2 32 ALA n 2 33 LEU n 2 34 ASP n 2 35 ARG n 2 36 GLU n 2 37 VAL n 2 38 GLN n 2 39 GLU n 2 40 LEU n 2 41 LYS n 2 42 LYS n 2 43 ARG n 2 44 LEU n 2 45 GLN n 2 46 GLU n 2 47 VAL n 2 48 GLN n 2 49 THR n 2 50 GLU n 2 51 ARG n 2 52 ASN n 2 53 GLN n 2 54 VAL n 2 55 ALA n 2 56 LYS n 2 57 ARG n 2 58 VAL n 2 59 PRO n 2 60 LYS n 2 61 ALA n 2 62 PRO n 2 63 PRO n 2 64 GLU n 2 65 GLU n 2 66 LYS n 2 67 GLU n 2 68 ALA n 2 69 LEU n 2 70 ILE n 2 71 ALA n 2 72 ARG n 2 73 GLY n 2 74 LYS n 2 75 ALA n 2 76 LEU n 2 77 GLY n 2 78 GLU n 2 79 GLU n 2 80 ALA n 2 81 LYS n 2 82 ARG n 2 83 LEU n 2 84 GLU n 2 85 GLU n 2 86 ALA n 2 87 LEU n 2 88 ARG n 2 89 GLU n 2 90 LYS n 2 91 GLU n 2 92 ALA n 2 93 ARG n 2 94 LEU n 2 95 GLU n 2 96 ALA n 2 97 LEU n 2 98 LEU n 2 99 LEU n 2 100 GLN n 2 101 VAL n 2 102 PRO n 2 103 LEU n 2 104 PRO n 2 105 PRO n 2 106 TRP n 2 107 PRO n 2 108 GLY n 2 109 ALA n 2 110 PRO n 2 111 VAL n 2 112 GLY n 2 113 GLY n 2 114 GLU n 2 115 GLU n 2 116 ALA n 2 117 ASN n 2 118 ARG n 2 119 GLU n 2 120 ILE n 2 121 LYS n 2 122 ARG n 2 123 VAL n 2 124 GLY n 2 125 GLY n 2 126 PRO n 2 127 PRO n 2 128 GLU n 2 129 PHE n 2 130 SER n 2 131 PHE n 2 132 PRO n 2 133 PRO n 2 134 LEU n 2 135 ASP n 2 136 HIS n 2 137 VAL n 2 138 ALA n 2 139 LEU n 2 140 MET n 2 141 GLU n 2 142 LYS n 2 143 ASN n 2 144 GLY n 2 145 TRP n 2 146 TRP n 2 147 GLU n 2 148 PRO n 2 149 ARG n 2 150 ILE n 2 151 SER n 2 152 GLN n 2 153 VAL n 2 154 SER n 2 155 GLY n 2 156 SER n 2 157 ARG n 2 158 SER n 2 159 TYR n 2 160 ALA n 2 161 LEU n 2 162 LYS n 2 163 GLY n 2 164 ASP n 2 165 LEU n 2 166 ALA n 2 167 LEU n 2 168 TYR n 2 169 GLU n 2 170 LEU n 2 171 ALA n 2 172 LEU n 2 173 LEU n 2 174 ARG n 2 175 PHE n 2 176 ALA n 2 177 MET n 2 178 ASP n 2 179 PHE n 2 180 MET n 2 181 ALA n 2 182 ARG n 2 183 ARG n 2 184 GLY n 2 185 PHE n 2 186 LEU n 2 187 PRO n 2 188 MET n 2 189 THR n 2 190 LEU n 2 191 PRO n 2 192 SER n 2 193 TYR n 2 194 ALA n 2 195 ARG n 2 196 GLU n 2 197 LYS n 2 198 ALA n 2 199 PHE n 2 200 LEU n 2 201 GLY n 2 202 THR n 2 203 GLY n 2 204 HIS n 2 205 PHE n 2 206 PRO n 2 207 ALA n 2 208 TYR n 2 209 ARG n 2 210 ASP n 2 211 GLN n 2 212 VAL n 2 213 TRP n 2 214 ALA n 2 215 ILE n 2 216 ALA n 2 217 GLU n 2 218 THR n 2 219 ASP n 2 220 LEU n 2 221 TYR n 2 222 LEU n 2 223 THR n 2 224 GLY n 2 225 THR n 2 226 ALA n 2 227 GLU n 2 228 VAL n 2 229 VAL n 2 230 LEU n 2 231 ASN n 2 232 ALA n 2 233 LEU n 2 234 HIS n 2 235 SER n 2 236 GLY n 2 237 GLU n 2 238 ILE n 2 239 LEU n 2 240 PRO n 2 241 TYR n 2 242 GLU n 2 243 ALA n 2 244 LEU n 2 245 PRO n 2 246 LEU n 2 247 ARG n 2 248 TYR n 2 249 ALA n 2 250 GLY n 2 251 TYR n 2 252 ALA n 2 253 PRO n 2 254 ALA n 2 255 PHE n 2 256 ARG n 2 257 SER n 2 258 GLU n 2 259 ALA n 2 260 GLY n 2 261 SER n 2 262 PHE n 2 263 GLY n 2 264 LYS n 2 265 ASP n 2 266 VAL n 2 267 ARG n 2 268 GLY n 2 269 LEU n 2 270 MET n 2 271 ARG n 2 272 VAL n 2 273 HIS n 2 274 GLN n 2 275 PHE n 2 276 HIS n 2 277 LYS n 2 278 VAL n 2 279 GLU n 2 280 GLN n 2 281 TYR n 2 282 VAL n 2 283 LEU n 2 284 THR n 2 285 GLU n 2 286 ALA n 2 287 SER n 2 288 LEU n 2 289 GLU n 2 290 ALA n 2 291 SER n 2 292 ASP n 2 293 ARG n 2 294 ALA n 2 295 PHE n 2 296 GLN n 2 297 GLU n 2 298 LEU n 2 299 LEU n 2 300 GLU n 2 301 ASN n 2 302 ALA n 2 303 GLU n 2 304 GLU n 2 305 ILE n 2 306 LEU n 2 307 ARG n 2 308 LEU n 2 309 LEU n 2 310 GLU n 2 311 LEU n 2 312 PRO n 2 313 TYR n 2 314 ARG n 2 315 LEU n 2 316 VAL n 2 317 GLU n 2 318 VAL n 2 319 ALA n 2 320 THR n 2 321 GLY n 2 322 ASP n 2 323 MET n 2 324 GLY n 2 325 PRO n 2 326 GLY n 2 327 LYS n 2 328 TRP n 2 329 ARG n 2 330 GLN n 2 331 VAL n 2 332 ASP n 2 333 ILE n 2 334 GLU n 2 335 VAL n 2 336 TYR n 2 337 LEU n 2 338 PRO n 2 339 SER n 2 340 GLU n 2 341 GLY n 2 342 ARG n 2 343 TYR n 2 344 ARG n 2 345 GLU n 2 346 THR n 2 347 HIS n 2 348 SER n 2 349 CYS n 2 350 SER n 2 351 ALA n 2 352 LEU n 2 353 LEU n 2 354 ASP n 2 355 TRP n 2 356 GLN n 2 357 ALA n 2 358 ARG n 2 359 ARG n 2 360 ALA n 2 361 ASN n 2 362 LEU n 2 363 ARG n 2 364 TYR n 2 365 ARG n 2 366 ASP n 2 367 PRO n 2 368 GLU n 2 369 GLY n 2 370 ARG n 2 371 VAL n 2 372 ARG n 2 373 TYR n 2 374 ALA n 2 375 TYR n 2 376 THR n 2 377 LEU n 2 378 ASN n 2 379 ASN n 2 380 THR n 2 381 ALA n 2 382 LEU n 2 383 ALA n 2 384 THR n 2 385 PRO n 2 386 ARG n 2 387 ILE n 2 388 LEU n 2 389 ALA n 2 390 MET n 2 391 LEU n 2 392 LEU n 2 393 GLU n 2 394 ASN n 2 395 HIS n 2 396 GLN n 2 397 LEU n 2 398 GLN n 2 399 ASP n 2 400 GLY n 2 401 ARG n 2 402 VAL n 2 403 ARG n 2 404 VAL n 2 405 PRO n 2 406 GLN n 2 407 ALA n 2 408 LEU n 2 409 ILE n 2 410 PRO n 2 411 TYR n 2 412 MET n 2 413 GLY n 2 414 LYS n 2 415 GLU n 2 416 VAL n 2 417 LEU n 2 418 GLU n 2 419 PRO n 2 420 CYS n 2 421 GLY n # loop_ _entity_src_nat.entity_id _entity_src_nat.pdbx_src_id _entity_src_nat.pdbx_alt_source_flag _entity_src_nat.pdbx_beg_seq_num _entity_src_nat.pdbx_end_seq_num _entity_src_nat.common_name _entity_src_nat.pdbx_organism_scientific _entity_src_nat.pdbx_ncbi_taxonomy_id _entity_src_nat.genus _entity_src_nat.species _entity_src_nat.strain _entity_src_nat.tissue _entity_src_nat.tissue_fraction _entity_src_nat.pdbx_secretion _entity_src_nat.pdbx_fragment _entity_src_nat.pdbx_variant _entity_src_nat.pdbx_cell_line _entity_src_nat.pdbx_atcc _entity_src_nat.pdbx_cellular_location _entity_src_nat.pdbx_organ _entity_src_nat.pdbx_organelle _entity_src_nat.pdbx_cell _entity_src_nat.pdbx_plasmid_name _entity_src_nat.pdbx_plasmid_details _entity_src_nat.details 1 1 sample ? ? ? 'Thermus thermophilus' 274 Thermus ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample ? ? ? 'Thermus thermophilus' 274 Thermus ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 5MU 'RNA linking' n ;5-METHYLURIDINE 5'-MONOPHOSPHATE ; ? 'C10 H15 N2 O9 P' 338.208 A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 H2U 'RNA linking' n "5,6-DIHYDROURIDINE-5'-MONOPHOSPHATE" ? 'C9 H15 N2 O9 P' 326.197 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 PSU 'RNA linking' n "PSEUDOURIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 ? ? ? T . n A 1 2 G 2 2 ? ? ? T . n A 1 3 A 3 3 ? ? ? T . n A 1 4 G 4 4 4 G G T . n A 1 5 A 5 5 5 A A T . n A 1 6 G 6 6 6 G G T . n A 1 7 G 7 7 7 G G T . n A 1 8 U 8 8 8 U U T . n A 1 9 G 9 9 9 G G T . n A 1 10 C 10 10 10 C C T . n A 1 11 C 11 11 11 C C T . n A 1 12 C 12 12 12 C C T . n A 1 13 G 13 13 13 G G T . n A 1 14 A 14 14 14 A A T . n A 1 15 G 15 15 15 G G T . n A 1 16 U 16 16 16 U U T . n A 1 17 G 17 18 18 G G T . n A 1 18 G 18 19 19 G G T . n A 1 19 C 19 20 20 C C T . n A 1 20 H2U 20 20 20 H2U DHU T A n A 1 21 G 21 20 20 G G T B n A 1 22 A 22 21 21 A A T . n A 1 23 A 23 22 22 A A T . n A 1 24 G 24 23 23 G G T . n A 1 25 G 25 24 24 G G T . n A 1 26 G 26 25 25 G G T . n A 1 27 A 27 26 26 A A T . n A 1 28 C 28 28 ? ? ? T . n A 1 29 A 29 29 ? ? ? T . n A 1 30 C 30 30 ? ? ? T . n A 1 31 G 31 31 ? ? ? T . n A 1 32 A 32 32 ? ? ? T . n A 1 33 C 33 33 ? ? ? T . n A 1 34 U 34 34 ? ? ? T . n A 1 35 G 35 35 ? ? ? T . n A 1 36 G 36 36 ? ? ? T . n A 1 37 A 37 37 ? ? ? T . n A 1 38 A 38 38 ? ? ? T . n A 1 39 A 39 39 ? ? ? T . n A 1 40 U 40 40 ? ? ? T . n A 1 41 C 41 41 ? ? ? T . n A 1 42 G 42 42 42 G G T . n A 1 43 U 43 42 ? ? ? T A n A 1 44 G 44 43 43 G G T . n A 1 45 U 45 44 44 U U T . n A 1 46 A 46 45 45 A A T . n A 1 47 G 47 46 46 G G T . n A 1 48 G 48 47 47 G G T . n A 1 49 G 49 47 47 G G T A n A 1 50 G 50 47 47 G G T B n A 1 51 G 51 47 47 G G T C n A 1 52 G 52 47 47 G G T D n A 1 53 C 53 47 ? ? ? T E n A 1 54 U 54 47 ? ? ? T F n A 1 55 U 55 47 ? ? ? T G n A 1 56 A 56 47 ? ? ? T H n A 1 57 A 57 47 ? ? ? T I n A 1 58 A 58 47 ? ? ? T J n A 1 59 C 59 47 47 C C T K n A 1 60 C 60 47 47 C C T L n A 1 61 U 61 47 47 U U T M n A 1 62 C 62 47 47 C C T N n A 1 63 C 63 47 47 C C T O n A 1 64 C 64 47 47 C C T P n A 1 65 U 65 47 47 U U T Q n A 1 66 C 66 48 48 C C T . n A 1 67 G 67 49 49 G G T . n A 1 68 C 68 50 50 C C T . n A 1 69 G 69 51 51 G G T . n A 1 70 G 70 52 52 G G T . n A 1 71 G 71 53 53 G G T . n A 1 72 5MU 72 54 54 5MU 5MU T . n A 1 73 PSU 73 55 55 PSU PSU T . n A 1 74 C 74 56 56 C C T . n A 1 75 G 75 57 57 G G T . n A 1 76 A 76 58 58 A A T . n A 1 77 A 77 59 59 A A T . n A 1 78 U 78 60 60 U U T . n A 1 79 C 79 61 61 C C T . n A 1 80 C 80 62 62 C C T . n A 1 81 C 81 63 63 C C T . n A 1 82 G 82 64 64 G G T . n A 1 83 C 83 65 65 C C T . n A 1 84 C 84 66 66 C C T . n A 1 85 C 85 67 67 C C T . n A 1 86 U 86 68 68 U U T . n A 1 87 C 87 69 69 C C T . n A 1 88 U 88 70 70 U U T . n A 1 89 C 89 71 71 C C T . n A 1 90 C 90 72 ? ? ? T . n A 1 91 G 91 73 ? ? ? T . n A 1 92 C 92 74 ? ? ? T . n A 1 93 C 93 75 ? ? ? T . n A 1 94 A 94 76 ? ? ? T . n B 2 1 MET 1 1 1 MET MET A . n B 2 2 VAL 2 2 2 VAL VAL A . n B 2 3 ASP 3 3 3 ASP ASP A . n B 2 4 LEU 4 4 4 LEU LEU A . n B 2 5 LYS 5 5 5 LYS LYS A . n B 2 6 ARG 6 6 6 ARG ARG A . n B 2 7 LEU 7 7 7 LEU LEU A . n B 2 8 ARG 8 8 8 ARG ARG A . n B 2 9 GLN 9 9 9 GLN GLN A . n B 2 10 GLU 10 10 10 GLU GLU A . n B 2 11 PRO 11 11 11 PRO PRO A . n B 2 12 GLU 12 12 12 GLU GLU A . n B 2 13 VAL 13 13 13 VAL VAL A . n B 2 14 PHE 14 14 14 PHE PHE A . n B 2 15 HIS 15 15 15 HIS HIS A . n B 2 16 ARG 16 16 16 ARG ARG A . n B 2 17 ALA 17 17 17 ALA ALA A . n B 2 18 ILE 18 18 18 ILE ILE A . n B 2 19 ARG 19 19 19 ARG ARG A . n B 2 20 GLU 20 20 20 GLU GLU A . n B 2 21 LYS 21 21 21 LYS LYS A . n B 2 22 GLY 22 22 22 GLY GLY A . n B 2 23 VAL 23 23 23 VAL VAL A . n B 2 24 ALA 24 24 24 ALA ALA A . n B 2 25 LEU 25 25 25 LEU LEU A . n B 2 26 ASP 26 26 26 ASP ASP A . n B 2 27 LEU 27 27 27 LEU LEU A . n B 2 28 GLU 28 28 28 GLU GLU A . n B 2 29 ALA 29 29 29 ALA ALA A . n B 2 30 LEU 30 30 30 LEU LEU A . n B 2 31 LEU 31 31 31 LEU LEU A . n B 2 32 ALA 32 32 32 ALA ALA A . n B 2 33 LEU 33 33 33 LEU LEU A . n B 2 34 ASP 34 34 34 ASP ASP A . n B 2 35 ARG 35 35 35 ARG ARG A . n B 2 36 GLU 36 36 36 GLU GLU A . n B 2 37 VAL 37 37 37 VAL VAL A . n B 2 38 GLN 38 38 38 GLN GLN A . n B 2 39 GLU 39 39 ? ? ? A . n B 2 40 LEU 40 40 ? ? ? A . n B 2 41 LYS 41 41 ? ? ? A . n B 2 42 LYS 42 42 ? ? ? A . n B 2 43 ARG 43 43 ? ? ? A . n B 2 44 LEU 44 44 ? ? ? A . n B 2 45 GLN 45 45 ? ? ? A . n B 2 46 GLU 46 46 ? ? ? A . n B 2 47 VAL 47 47 ? ? ? A . n B 2 48 GLN 48 48 ? ? ? A . n B 2 49 THR 49 49 ? ? ? A . n B 2 50 GLU 50 50 ? ? ? A . n B 2 51 ARG 51 51 ? ? ? A . n B 2 52 ASN 52 52 ? ? ? A . n B 2 53 GLN 53 53 ? ? ? A . n B 2 54 VAL 54 54 ? ? ? A . n B 2 55 ALA 55 55 ? ? ? A . n B 2 56 LYS 56 56 ? ? ? A . n B 2 57 ARG 57 57 ? ? ? A . n B 2 58 VAL 58 58 ? ? ? A . n B 2 59 PRO 59 59 ? ? ? A . n B 2 60 LYS 60 60 ? ? ? A . n B 2 61 ALA 61 61 ? ? ? A . n B 2 62 PRO 62 62 ? ? ? A . n B 2 63 PRO 63 63 ? ? ? A . n B 2 64 GLU 64 64 ? ? ? A . n B 2 65 GLU 65 65 ? ? ? A . n B 2 66 LYS 66 66 ? ? ? A . n B 2 67 GLU 67 67 ? ? ? A . n B 2 68 ALA 68 68 ? ? ? A . n B 2 69 LEU 69 69 ? ? ? A . n B 2 70 ILE 70 70 ? ? ? A . n B 2 71 ALA 71 71 ? ? ? A . n B 2 72 ARG 72 72 ? ? ? A . n B 2 73 GLY 73 73 ? ? ? A . n B 2 74 LYS 74 74 ? ? ? A . n B 2 75 ALA 75 75 ? ? ? A . n B 2 76 LEU 76 76 ? ? ? A . n B 2 77 GLY 77 77 ? ? ? A . n B 2 78 GLU 78 78 ? ? ? A . n B 2 79 GLU 79 79 ? ? ? A . n B 2 80 ALA 80 80 ? ? ? A . n B 2 81 LYS 81 81 ? ? ? A . n B 2 82 ARG 82 82 ? ? ? A . n B 2 83 LEU 83 83 ? ? ? A . n B 2 84 GLU 84 84 ? ? ? A . n B 2 85 GLU 85 85 ? ? ? A . n B 2 86 ALA 86 86 ? ? ? A . n B 2 87 LEU 87 87 ? ? ? A . n B 2 88 ARG 88 88 88 ARG ARG A . n B 2 89 GLU 89 89 89 GLU GLU A . n B 2 90 LYS 90 90 90 LYS LYS A . n B 2 91 GLU 91 91 91 GLU GLU A . n B 2 92 ALA 92 92 92 ALA ALA A . n B 2 93 ARG 93 93 93 ARG ARG A . n B 2 94 LEU 94 94 94 LEU LEU A . n B 2 95 GLU 95 95 95 GLU GLU A . n B 2 96 ALA 96 96 96 ALA ALA A . n B 2 97 LEU 97 97 97 LEU LEU A . n B 2 98 LEU 98 98 98 LEU LEU A . n B 2 99 LEU 99 99 99 LEU LEU A . n B 2 100 GLN 100 100 100 GLN GLN A . n B 2 101 VAL 101 101 101 VAL VAL A . n B 2 102 PRO 102 102 102 PRO PRO A . n B 2 103 LEU 103 103 103 LEU LEU A . n B 2 104 PRO 104 104 104 PRO PRO A . n B 2 105 PRO 105 105 105 PRO PRO A . n B 2 106 TRP 106 106 106 TRP TRP A . n B 2 107 PRO 107 107 107 PRO PRO A . n B 2 108 GLY 108 108 108 GLY GLY A . n B 2 109 ALA 109 109 109 ALA ALA A . n B 2 110 PRO 110 110 110 PRO PRO A . n B 2 111 VAL 111 111 111 VAL VAL A . n B 2 112 GLY 112 112 112 GLY GLY A . n B 2 113 GLY 113 113 113 GLY GLY A . n B 2 114 GLU 114 114 114 GLU GLU A . n B 2 115 GLU 115 115 115 GLU GLU A . n B 2 116 ALA 116 116 116 ALA ALA A . n B 2 117 ASN 117 117 117 ASN ASN A . n B 2 118 ARG 118 118 118 ARG ARG A . n B 2 119 GLU 119 119 119 GLU GLU A . n B 2 120 ILE 120 120 120 ILE ILE A . n B 2 121 LYS 121 121 121 LYS LYS A . n B 2 122 ARG 122 122 122 ARG ARG A . n B 2 123 VAL 123 123 123 VAL VAL A . n B 2 124 GLY 124 124 124 GLY GLY A . n B 2 125 GLY 125 125 125 GLY GLY A . n B 2 126 PRO 126 126 126 PRO PRO A . n B 2 127 PRO 127 127 127 PRO PRO A . n B 2 128 GLU 128 128 128 GLU GLU A . n B 2 129 PHE 129 129 129 PHE PHE A . n B 2 130 SER 130 130 130 SER SER A . n B 2 131 PHE 131 131 131 PHE PHE A . n B 2 132 PRO 132 132 132 PRO PRO A . n B 2 133 PRO 133 133 133 PRO PRO A . n B 2 134 LEU 134 134 134 LEU LEU A . n B 2 135 ASP 135 135 135 ASP ASP A . n B 2 136 HIS 136 136 136 HIS HIS A . n B 2 137 VAL 137 137 137 VAL VAL A . n B 2 138 ALA 138 138 138 ALA ALA A . n B 2 139 LEU 139 139 139 LEU LEU A . n B 2 140 MET 140 140 140 MET MET A . n B 2 141 GLU 141 141 141 GLU GLU A . n B 2 142 LYS 142 142 142 LYS LYS A . n B 2 143 ASN 143 143 143 ASN ASN A . n B 2 144 GLY 144 144 144 GLY GLY A . n B 2 145 TRP 145 145 145 TRP TRP A . n B 2 146 TRP 146 146 146 TRP TRP A . n B 2 147 GLU 147 147 147 GLU GLU A . n B 2 148 PRO 148 148 148 PRO PRO A . n B 2 149 ARG 149 149 149 ARG ARG A . n B 2 150 ILE 150 150 150 ILE ILE A . n B 2 151 SER 151 151 151 SER SER A . n B 2 152 GLN 152 152 152 GLN GLN A . n B 2 153 VAL 153 153 153 VAL VAL A . n B 2 154 SER 154 154 154 SER SER A . n B 2 155 GLY 155 155 155 GLY GLY A . n B 2 156 SER 156 156 156 SER SER A . n B 2 157 ARG 157 157 157 ARG ARG A . n B 2 158 SER 158 158 158 SER SER A . n B 2 159 TYR 159 159 159 TYR TYR A . n B 2 160 ALA 160 160 160 ALA ALA A . n B 2 161 LEU 161 161 161 LEU LEU A . n B 2 162 LYS 162 162 162 LYS LYS A . n B 2 163 GLY 163 163 163 GLY GLY A . n B 2 164 ASP 164 164 164 ASP ASP A . n B 2 165 LEU 165 165 165 LEU LEU A . n B 2 166 ALA 166 166 166 ALA ALA A . n B 2 167 LEU 167 167 167 LEU LEU A . n B 2 168 TYR 168 168 168 TYR TYR A . n B 2 169 GLU 169 169 169 GLU GLU A . n B 2 170 LEU 170 170 170 LEU LEU A . n B 2 171 ALA 171 171 171 ALA ALA A . n B 2 172 LEU 172 172 172 LEU LEU A . n B 2 173 LEU 173 173 173 LEU LEU A . n B 2 174 ARG 174 174 174 ARG ARG A . n B 2 175 PHE 175 175 175 PHE PHE A . n B 2 176 ALA 176 176 176 ALA ALA A . n B 2 177 MET 177 177 177 MET MET A . n B 2 178 ASP 178 178 178 ASP ASP A . n B 2 179 PHE 179 179 179 PHE PHE A . n B 2 180 MET 180 180 180 MET MET A . n B 2 181 ALA 181 181 181 ALA ALA A . n B 2 182 ARG 182 182 182 ARG ARG A . n B 2 183 ARG 183 183 183 ARG ARG A . n B 2 184 GLY 184 184 184 GLY GLY A . n B 2 185 PHE 185 185 185 PHE PHE A . n B 2 186 LEU 186 186 186 LEU LEU A . n B 2 187 PRO 187 187 187 PRO PRO A . n B 2 188 MET 188 188 188 MET MET A . n B 2 189 THR 189 189 189 THR THR A . n B 2 190 LEU 190 190 190 LEU LEU A . n B 2 191 PRO 191 191 191 PRO PRO A . n B 2 192 SER 192 192 192 SER SER A . n B 2 193 TYR 193 193 193 TYR TYR A . n B 2 194 ALA 194 194 194 ALA ALA A . n B 2 195 ARG 195 195 195 ARG ARG A . n B 2 196 GLU 196 196 196 GLU GLU A . n B 2 197 LYS 197 197 197 LYS LYS A . n B 2 198 ALA 198 198 198 ALA ALA A . n B 2 199 PHE 199 199 199 PHE PHE A . n B 2 200 LEU 200 200 200 LEU LEU A . n B 2 201 GLY 201 201 201 GLY GLY A . n B 2 202 THR 202 202 202 THR THR A . n B 2 203 GLY 203 203 203 GLY GLY A . n B 2 204 HIS 204 204 204 HIS HIS A . n B 2 205 PHE 205 205 205 PHE PHE A . n B 2 206 PRO 206 206 206 PRO PRO A . n B 2 207 ALA 207 207 207 ALA ALA A . n B 2 208 TYR 208 208 208 TYR TYR A . n B 2 209 ARG 209 209 209 ARG ARG A . n B 2 210 ASP 210 210 210 ASP ASP A . n B 2 211 GLN 211 211 211 GLN GLN A . n B 2 212 VAL 212 212 212 VAL VAL A . n B 2 213 TRP 213 213 213 TRP TRP A . n B 2 214 ALA 214 214 214 ALA ALA A . n B 2 215 ILE 215 215 215 ILE ILE A . n B 2 216 ALA 216 216 216 ALA ALA A . n B 2 217 GLU 217 217 217 GLU GLU A . n B 2 218 THR 218 218 218 THR THR A . n B 2 219 ASP 219 219 219 ASP ASP A . n B 2 220 LEU 220 220 220 LEU LEU A . n B 2 221 TYR 221 221 221 TYR TYR A . n B 2 222 LEU 222 222 222 LEU LEU A . n B 2 223 THR 223 223 223 THR THR A . n B 2 224 GLY 224 224 224 GLY GLY A . n B 2 225 THR 225 225 225 THR THR A . n B 2 226 ALA 226 226 226 ALA ALA A . n B 2 227 GLU 227 227 227 GLU GLU A . n B 2 228 VAL 228 228 228 VAL VAL A . n B 2 229 VAL 229 229 229 VAL VAL A . n B 2 230 LEU 230 230 230 LEU LEU A . n B 2 231 ASN 231 231 231 ASN ASN A . n B 2 232 ALA 232 232 232 ALA ALA A . n B 2 233 LEU 233 233 233 LEU LEU A . n B 2 234 HIS 234 234 234 HIS HIS A . n B 2 235 SER 235 235 235 SER SER A . n B 2 236 GLY 236 236 236 GLY GLY A . n B 2 237 GLU 237 237 237 GLU GLU A . n B 2 238 ILE 238 238 238 ILE ILE A . n B 2 239 LEU 239 239 239 LEU LEU A . n B 2 240 PRO 240 240 240 PRO PRO A . n B 2 241 TYR 241 241 241 TYR TYR A . n B 2 242 GLU 242 242 242 GLU GLU A . n B 2 243 ALA 243 243 243 ALA ALA A . n B 2 244 LEU 244 244 244 LEU LEU A . n B 2 245 PRO 245 245 245 PRO PRO A . n B 2 246 LEU 246 246 246 LEU LEU A . n B 2 247 ARG 247 247 247 ARG ARG A . n B 2 248 TYR 248 248 248 TYR TYR A . n B 2 249 ALA 249 249 249 ALA ALA A . n B 2 250 GLY 250 250 250 GLY GLY A . n B 2 251 TYR 251 251 251 TYR TYR A . n B 2 252 ALA 252 252 252 ALA ALA A . n B 2 253 PRO 253 253 253 PRO PRO A . n B 2 254 ALA 254 254 254 ALA ALA A . n B 2 255 PHE 255 255 255 PHE PHE A . n B 2 256 ARG 256 256 256 ARG ARG A . n B 2 257 SER 257 257 257 SER SER A . n B 2 258 GLU 258 258 258 GLU GLU A . n B 2 259 ALA 259 259 259 ALA ALA A . n B 2 260 GLY 260 260 260 GLY GLY A . n B 2 261 SER 261 261 261 SER SER A . n B 2 262 PHE 262 262 262 PHE PHE A . n B 2 263 GLY 263 263 263 GLY GLY A . n B 2 264 LYS 264 264 264 LYS LYS A . n B 2 265 ASP 265 265 265 ASP ASP A . n B 2 266 VAL 266 266 266 VAL VAL A . n B 2 267 ARG 267 267 267 ARG ARG A . n B 2 268 GLY 268 268 268 GLY GLY A . n B 2 269 LEU 269 269 269 LEU LEU A . n B 2 270 MET 270 270 270 MET MET A . n B 2 271 ARG 271 271 271 ARG ARG A . n B 2 272 VAL 272 272 272 VAL VAL A . n B 2 273 HIS 273 273 273 HIS HIS A . n B 2 274 GLN 274 274 274 GLN GLN A . n B 2 275 PHE 275 275 275 PHE PHE A . n B 2 276 HIS 276 276 276 HIS HIS A . n B 2 277 LYS 277 277 277 LYS LYS A . n B 2 278 VAL 278 278 278 VAL VAL A . n B 2 279 GLU 279 279 279 GLU GLU A . n B 2 280 GLN 280 280 280 GLN GLN A . n B 2 281 TYR 281 281 281 TYR TYR A . n B 2 282 VAL 282 282 282 VAL VAL A . n B 2 283 LEU 283 283 283 LEU LEU A . n B 2 284 THR 284 284 284 THR THR A . n B 2 285 GLU 285 285 285 GLU GLU A . n B 2 286 ALA 286 286 286 ALA ALA A . n B 2 287 SER 287 287 287 SER SER A . n B 2 288 LEU 288 288 288 LEU LEU A . n B 2 289 GLU 289 289 289 GLU GLU A . n B 2 290 ALA 290 290 290 ALA ALA A . n B 2 291 SER 291 291 291 SER SER A . n B 2 292 ASP 292 292 292 ASP ASP A . n B 2 293 ARG 293 293 293 ARG ARG A . n B 2 294 ALA 294 294 294 ALA ALA A . n B 2 295 PHE 295 295 295 PHE PHE A . n B 2 296 GLN 296 296 296 GLN GLN A . n B 2 297 GLU 297 297 297 GLU GLU A . n B 2 298 LEU 298 298 298 LEU LEU A . n B 2 299 LEU 299 299 299 LEU LEU A . n B 2 300 GLU 300 300 300 GLU GLU A . n B 2 301 ASN 301 301 301 ASN ASN A . n B 2 302 ALA 302 302 302 ALA ALA A . n B 2 303 GLU 303 303 303 GLU GLU A . n B 2 304 GLU 304 304 304 GLU GLU A . n B 2 305 ILE 305 305 305 ILE ILE A . n B 2 306 LEU 306 306 306 LEU LEU A . n B 2 307 ARG 307 307 307 ARG ARG A . n B 2 308 LEU 308 308 308 LEU LEU A . n B 2 309 LEU 309 309 309 LEU LEU A . n B 2 310 GLU 310 310 310 GLU GLU A . n B 2 311 LEU 311 311 311 LEU LEU A . n B 2 312 PRO 312 312 312 PRO PRO A . n B 2 313 TYR 313 313 313 TYR TYR A . n B 2 314 ARG 314 314 314 ARG ARG A . n B 2 315 LEU 315 315 315 LEU LEU A . n B 2 316 VAL 316 316 316 VAL VAL A . n B 2 317 GLU 317 317 317 GLU GLU A . n B 2 318 VAL 318 318 318 VAL VAL A . n B 2 319 ALA 319 319 319 ALA ALA A . n B 2 320 THR 320 320 320 THR THR A . n B 2 321 GLY 321 321 321 GLY GLY A . n B 2 322 ASP 322 322 322 ASP ASP A . n B 2 323 MET 323 323 323 MET MET A . n B 2 324 GLY 324 324 324 GLY GLY A . n B 2 325 PRO 325 325 325 PRO PRO A . n B 2 326 GLY 326 326 326 GLY GLY A . n B 2 327 LYS 327 327 327 LYS LYS A . n B 2 328 TRP 328 328 328 TRP TRP A . n B 2 329 ARG 329 329 329 ARG ARG A . n B 2 330 GLN 330 330 330 GLN GLN A . n B 2 331 VAL 331 331 331 VAL VAL A . n B 2 332 ASP 332 332 332 ASP ASP A . n B 2 333 ILE 333 333 333 ILE ILE A . n B 2 334 GLU 334 334 334 GLU GLU A . n B 2 335 VAL 335 335 335 VAL VAL A . n B 2 336 TYR 336 336 336 TYR TYR A . n B 2 337 LEU 337 337 337 LEU LEU A . n B 2 338 PRO 338 338 338 PRO PRO A . n B 2 339 SER 339 339 339 SER SER A . n B 2 340 GLU 340 340 340 GLU GLU A . n B 2 341 GLY 341 341 341 GLY GLY A . n B 2 342 ARG 342 342 342 ARG ARG A . n B 2 343 TYR 343 343 343 TYR TYR A . n B 2 344 ARG 344 344 344 ARG ARG A . n B 2 345 GLU 345 345 345 GLU GLU A . n B 2 346 THR 346 346 346 THR THR A . n B 2 347 HIS 347 347 347 HIS HIS A . n B 2 348 SER 348 348 348 SER SER A . n B 2 349 CYS 349 349 349 CYS CYS A . n B 2 350 SER 350 350 350 SER SER A . n B 2 351 ALA 351 351 351 ALA ALA A . n B 2 352 LEU 352 352 352 LEU LEU A . n B 2 353 LEU 353 353 353 LEU LEU A . n B 2 354 ASP 354 354 354 ASP ASP A . n B 2 355 TRP 355 355 355 TRP TRP A . n B 2 356 GLN 356 356 356 GLN GLN A . n B 2 357 ALA 357 357 357 ALA ALA A . n B 2 358 ARG 358 358 358 ARG ARG A . n B 2 359 ARG 359 359 359 ARG ARG A . n B 2 360 ALA 360 360 360 ALA ALA A . n B 2 361 ASN 361 361 361 ASN ASN A . n B 2 362 LEU 362 362 362 LEU LEU A . n B 2 363 ARG 363 363 363 ARG ARG A . n B 2 364 TYR 364 364 364 TYR TYR A . n B 2 365 ARG 365 365 365 ARG ARG A . n B 2 366 ASP 366 366 366 ASP ASP A . n B 2 367 PRO 367 367 367 PRO PRO A . n B 2 368 GLU 368 368 368 GLU GLU A . n B 2 369 GLY 369 369 369 GLY GLY A . n B 2 370 ARG 370 370 370 ARG ARG A . n B 2 371 VAL 371 371 371 VAL VAL A . n B 2 372 ARG 372 372 372 ARG ARG A . n B 2 373 TYR 373 373 373 TYR TYR A . n B 2 374 ALA 374 374 374 ALA ALA A . n B 2 375 TYR 375 375 375 TYR TYR A . n B 2 376 THR 376 376 376 THR THR A . n B 2 377 LEU 377 377 377 LEU LEU A . n B 2 378 ASN 378 378 378 ASN ASN A . n B 2 379 ASN 379 379 379 ASN ASN A . n B 2 380 THR 380 380 380 THR THR A . n B 2 381 ALA 381 381 381 ALA ALA A . n B 2 382 LEU 382 382 382 LEU LEU A . n B 2 383 ALA 383 383 383 ALA ALA A . n B 2 384 THR 384 384 384 THR THR A . n B 2 385 PRO 385 385 385 PRO PRO A . n B 2 386 ARG 386 386 386 ARG ARG A . n B 2 387 ILE 387 387 387 ILE ILE A . n B 2 388 LEU 388 388 388 LEU LEU A . n B 2 389 ALA 389 389 389 ALA ALA A . n B 2 390 MET 390 390 390 MET MET A . n B 2 391 LEU 391 391 391 LEU LEU A . n B 2 392 LEU 392 392 392 LEU LEU A . n B 2 393 GLU 393 393 393 GLU GLU A . n B 2 394 ASN 394 394 394 ASN ASN A . n B 2 395 HIS 395 395 395 HIS HIS A . n B 2 396 GLN 396 396 396 GLN GLN A . n B 2 397 LEU 397 397 397 LEU LEU A . n B 2 398 GLN 398 398 398 GLN GLN A . n B 2 399 ASP 399 399 399 ASP ASP A . n B 2 400 GLY 400 400 400 GLY GLY A . n B 2 401 ARG 401 401 401 ARG ARG A . n B 2 402 VAL 402 402 402 VAL VAL A . n B 2 403 ARG 403 403 403 ARG ARG A . n B 2 404 VAL 404 404 404 VAL VAL A . n B 2 405 PRO 405 405 405 PRO PRO A . n B 2 406 GLN 406 406 406 GLN GLN A . n B 2 407 ALA 407 407 407 ALA ALA A . n B 2 408 LEU 408 408 408 LEU LEU A . n B 2 409 ILE 409 409 409 ILE ILE A . n B 2 410 PRO 410 410 410 PRO PRO A . n B 2 411 TYR 411 411 411 TYR TYR A . n B 2 412 MET 412 412 412 MET MET A . n B 2 413 GLY 413 413 413 GLY GLY A . n B 2 414 LYS 414 414 414 LYS LYS A . n B 2 415 GLU 415 415 415 GLU GLU A . n B 2 416 VAL 416 416 416 VAL VAL A . n B 2 417 LEU 417 417 417 LEU LEU A . n B 2 418 GLU 418 418 418 GLU GLU A . n B 2 419 PRO 419 419 419 PRO PRO A . n B 2 420 CYS 420 420 420 CYS CYS A . n B 2 421 GLY 421 421 421 GLY GLY A . n C 2 1 MET 1 501 501 MET MET B . n C 2 2 VAL 2 502 502 VAL VAL B . n C 2 3 ASP 3 503 503 ASP ASP B . n C 2 4 LEU 4 504 504 LEU LEU B . n C 2 5 LYS 5 505 505 LYS LYS B . n C 2 6 ARG 6 506 506 ARG ARG B . n C 2 7 LEU 7 507 507 LEU LEU B . n C 2 8 ARG 8 508 508 ARG ARG B . n C 2 9 GLN 9 509 509 GLN GLN B . n C 2 10 GLU 10 510 510 GLU GLU B . n C 2 11 PRO 11 511 511 PRO PRO B . n C 2 12 GLU 12 512 512 GLU GLU B . n C 2 13 VAL 13 513 513 VAL VAL B . n C 2 14 PHE 14 514 514 PHE PHE B . n C 2 15 HIS 15 515 515 HIS HIS B . n C 2 16 ARG 16 516 516 ARG ARG B . n C 2 17 ALA 17 517 517 ALA ALA B . n C 2 18 ILE 18 518 518 ILE ILE B . n C 2 19 ARG 19 519 519 ARG ARG B . n C 2 20 GLU 20 520 520 GLU GLU B . n C 2 21 LYS 21 521 521 LYS LYS B . n C 2 22 GLY 22 522 522 GLY GLY B . n C 2 23 VAL 23 523 523 VAL VAL B . n C 2 24 ALA 24 524 524 ALA ALA B . n C 2 25 LEU 25 525 525 LEU LEU B . n C 2 26 ASP 26 526 526 ASP ASP B . n C 2 27 LEU 27 527 527 LEU LEU B . n C 2 28 GLU 28 528 528 GLU GLU B . n C 2 29 ALA 29 529 529 ALA ALA B . n C 2 30 LEU 30 530 530 LEU LEU B . n C 2 31 LEU 31 531 531 LEU LEU B . n C 2 32 ALA 32 532 532 ALA ALA B . n C 2 33 LEU 33 533 533 LEU LEU B . n C 2 34 ASP 34 534 534 ASP ASP B . n C 2 35 ARG 35 535 535 ARG ARG B . n C 2 36 GLU 36 536 536 GLU GLU B . n C 2 37 VAL 37 537 537 VAL VAL B . n C 2 38 GLN 38 538 538 GLN GLN B . n C 2 39 GLU 39 539 539 GLU GLU B . n C 2 40 LEU 40 540 540 LEU LEU B . n C 2 41 LYS 41 541 541 LYS LYS B . n C 2 42 LYS 42 542 542 LYS LYS B . n C 2 43 ARG 43 543 543 ARG ARG B . n C 2 44 LEU 44 544 544 LEU LEU B . n C 2 45 GLN 45 545 545 GLN GLN B . n C 2 46 GLU 46 546 546 GLU GLU B . n C 2 47 VAL 47 547 547 VAL VAL B . n C 2 48 GLN 48 548 548 GLN GLN B . n C 2 49 THR 49 549 549 THR THR B . n C 2 50 GLU 50 550 550 GLU GLU B . n C 2 51 ARG 51 551 551 ARG ARG B . n C 2 52 ASN 52 552 552 ASN ASN B . n C 2 53 GLN 53 553 553 GLN GLN B . n C 2 54 VAL 54 554 554 VAL VAL B . n C 2 55 ALA 55 555 555 ALA ALA B . n C 2 56 LYS 56 556 556 LYS LYS B . n C 2 57 ARG 57 557 557 ARG ARG B . n C 2 58 VAL 58 558 558 VAL VAL B . n C 2 59 PRO 59 559 559 PRO PRO B . n C 2 60 LYS 60 560 560 LYS LYS B . n C 2 61 ALA 61 561 561 ALA ALA B . n C 2 62 PRO 62 562 562 PRO PRO B . n C 2 63 PRO 63 563 563 PRO PRO B . n C 2 64 GLU 64 564 564 GLU GLU B . n C 2 65 GLU 65 565 565 GLU GLU B . n C 2 66 LYS 66 566 566 LYS LYS B . n C 2 67 GLU 67 567 567 GLU GLU B . n C 2 68 ALA 68 568 568 ALA ALA B . n C 2 69 LEU 69 569 569 LEU LEU B . n C 2 70 ILE 70 570 570 ILE ILE B . n C 2 71 ALA 71 571 571 ALA ALA B . n C 2 72 ARG 72 572 572 ARG ARG B . n C 2 73 GLY 73 573 573 GLY GLY B . n C 2 74 LYS 74 574 574 LYS LYS B . n C 2 75 ALA 75 575 575 ALA ALA B . n C 2 76 LEU 76 576 576 LEU LEU B . n C 2 77 GLY 77 577 577 GLY GLY B . n C 2 78 GLU 78 578 578 GLU GLU B . n C 2 79 GLU 79 579 579 GLU GLU B . n C 2 80 ALA 80 580 580 ALA ALA B . n C 2 81 LYS 81 581 581 LYS LYS B . n C 2 82 ARG 82 582 582 ARG ARG B . n C 2 83 LEU 83 583 583 LEU LEU B . n C 2 84 GLU 84 584 584 GLU GLU B . n C 2 85 GLU 85 585 585 GLU GLU B . n C 2 86 ALA 86 586 586 ALA ALA B . n C 2 87 LEU 87 587 587 LEU LEU B . n C 2 88 ARG 88 588 588 ARG ARG B . n C 2 89 GLU 89 589 589 GLU GLU B . n C 2 90 LYS 90 590 590 LYS LYS B . n C 2 91 GLU 91 591 591 GLU GLU B . n C 2 92 ALA 92 592 592 ALA ALA B . n C 2 93 ARG 93 593 593 ARG ARG B . n C 2 94 LEU 94 594 594 LEU LEU B . n C 2 95 GLU 95 595 595 GLU GLU B . n C 2 96 ALA 96 596 596 ALA ALA B . n C 2 97 LEU 97 597 597 LEU LEU B . n C 2 98 LEU 98 598 598 LEU LEU B . n C 2 99 LEU 99 599 599 LEU LEU B . n C 2 100 GLN 100 600 600 GLN GLN B . n C 2 101 VAL 101 601 601 VAL VAL B . n C 2 102 PRO 102 602 602 PRO PRO B . n C 2 103 LEU 103 603 603 LEU LEU B . n C 2 104 PRO 104 604 604 PRO PRO B . n C 2 105 PRO 105 605 605 PRO PRO B . n C 2 106 TRP 106 606 606 TRP TRP B . n C 2 107 PRO 107 607 607 PRO PRO B . n C 2 108 GLY 108 608 608 GLY GLY B . n C 2 109 ALA 109 609 609 ALA ALA B . n C 2 110 PRO 110 610 610 PRO PRO B . n C 2 111 VAL 111 611 611 VAL VAL B . n C 2 112 GLY 112 612 612 GLY GLY B . n C 2 113 GLY 113 613 613 GLY GLY B . n C 2 114 GLU 114 614 614 GLU GLU B . n C 2 115 GLU 115 615 615 GLU GLU B . n C 2 116 ALA 116 616 616 ALA ALA B . n C 2 117 ASN 117 617 617 ASN ASN B . n C 2 118 ARG 118 618 618 ARG ARG B . n C 2 119 GLU 119 619 619 GLU GLU B . n C 2 120 ILE 120 620 620 ILE ILE B . n C 2 121 LYS 121 621 621 LYS LYS B . n C 2 122 ARG 122 622 622 ARG ARG B . n C 2 123 VAL 123 623 623 VAL VAL B . n C 2 124 GLY 124 624 624 GLY GLY B . n C 2 125 GLY 125 625 625 GLY GLY B . n C 2 126 PRO 126 626 626 PRO PRO B . n C 2 127 PRO 127 627 627 PRO PRO B . n C 2 128 GLU 128 628 628 GLU GLU B . n C 2 129 PHE 129 629 629 PHE PHE B . n C 2 130 SER 130 630 630 SER SER B . n C 2 131 PHE 131 631 631 PHE PHE B . n C 2 132 PRO 132 632 632 PRO PRO B . n C 2 133 PRO 133 633 633 PRO PRO B . n C 2 134 LEU 134 634 634 LEU LEU B . n C 2 135 ASP 135 635 635 ASP ASP B . n C 2 136 HIS 136 636 636 HIS HIS B . n C 2 137 VAL 137 637 637 VAL VAL B . n C 2 138 ALA 138 638 638 ALA ALA B . n C 2 139 LEU 139 639 639 LEU LEU B . n C 2 140 MET 140 640 640 MET MET B . n C 2 141 GLU 141 641 641 GLU GLU B . n C 2 142 LYS 142 642 642 LYS LYS B . n C 2 143 ASN 143 643 643 ASN ASN B . n C 2 144 GLY 144 644 644 GLY GLY B . n C 2 145 TRP 145 645 645 TRP TRP B . n C 2 146 TRP 146 646 646 TRP TRP B . n C 2 147 GLU 147 647 647 GLU GLU B . n C 2 148 PRO 148 648 648 PRO PRO B . n C 2 149 ARG 149 649 649 ARG ARG B . n C 2 150 ILE 150 650 650 ILE ILE B . n C 2 151 SER 151 651 651 SER SER B . n C 2 152 GLN 152 652 652 GLN GLN B . n C 2 153 VAL 153 653 653 VAL VAL B . n C 2 154 SER 154 654 654 SER SER B . n C 2 155 GLY 155 655 655 GLY GLY B . n C 2 156 SER 156 656 656 SER SER B . n C 2 157 ARG 157 657 657 ARG ARG B . n C 2 158 SER 158 658 658 SER SER B . n C 2 159 TYR 159 659 659 TYR TYR B . n C 2 160 ALA 160 660 660 ALA ALA B . n C 2 161 LEU 161 661 661 LEU LEU B . n C 2 162 LYS 162 662 662 LYS LYS B . n C 2 163 GLY 163 663 663 GLY GLY B . n C 2 164 ASP 164 664 664 ASP ASP B . n C 2 165 LEU 165 665 665 LEU LEU B . n C 2 166 ALA 166 666 666 ALA ALA B . n C 2 167 LEU 167 667 667 LEU LEU B . n C 2 168 TYR 168 668 668 TYR TYR B . n C 2 169 GLU 169 669 669 GLU GLU B . n C 2 170 LEU 170 670 670 LEU LEU B . n C 2 171 ALA 171 671 671 ALA ALA B . n C 2 172 LEU 172 672 672 LEU LEU B . n C 2 173 LEU 173 673 673 LEU LEU B . n C 2 174 ARG 174 674 674 ARG ARG B . n C 2 175 PHE 175 675 675 PHE PHE B . n C 2 176 ALA 176 676 676 ALA ALA B . n C 2 177 MET 177 677 677 MET MET B . n C 2 178 ASP 178 678 678 ASP ASP B . n C 2 179 PHE 179 679 679 PHE PHE B . n C 2 180 MET 180 680 680 MET MET B . n C 2 181 ALA 181 681 681 ALA ALA B . n C 2 182 ARG 182 682 682 ARG ARG B . n C 2 183 ARG 183 683 683 ARG ARG B . n C 2 184 GLY 184 684 684 GLY GLY B . n C 2 185 PHE 185 685 685 PHE PHE B . n C 2 186 LEU 186 686 686 LEU LEU B . n C 2 187 PRO 187 687 687 PRO PRO B . n C 2 188 MET 188 688 688 MET MET B . n C 2 189 THR 189 689 689 THR THR B . n C 2 190 LEU 190 690 690 LEU LEU B . n C 2 191 PRO 191 691 691 PRO PRO B . n C 2 192 SER 192 692 692 SER SER B . n C 2 193 TYR 193 693 693 TYR TYR B . n C 2 194 ALA 194 694 694 ALA ALA B . n C 2 195 ARG 195 695 695 ARG ARG B . n C 2 196 GLU 196 696 696 GLU GLU B . n C 2 197 LYS 197 697 697 LYS LYS B . n C 2 198 ALA 198 698 698 ALA ALA B . n C 2 199 PHE 199 699 699 PHE PHE B . n C 2 200 LEU 200 700 700 LEU LEU B . n C 2 201 GLY 201 701 701 GLY GLY B . n C 2 202 THR 202 702 702 THR THR B . n C 2 203 GLY 203 703 703 GLY GLY B . n C 2 204 HIS 204 704 704 HIS HIS B . n C 2 205 PHE 205 705 705 PHE PHE B . n C 2 206 PRO 206 706 706 PRO PRO B . n C 2 207 ALA 207 707 707 ALA ALA B . n C 2 208 TYR 208 708 708 TYR TYR B . n C 2 209 ARG 209 709 709 ARG ARG B . n C 2 210 ASP 210 710 710 ASP ASP B . n C 2 211 GLN 211 711 711 GLN GLN B . n C 2 212 VAL 212 712 712 VAL VAL B . n C 2 213 TRP 213 713 713 TRP TRP B . n C 2 214 ALA 214 714 714 ALA ALA B . n C 2 215 ILE 215 715 715 ILE ILE B . n C 2 216 ALA 216 716 716 ALA ALA B . n C 2 217 GLU 217 717 717 GLU GLU B . n C 2 218 THR 218 718 718 THR THR B . n C 2 219 ASP 219 719 719 ASP ASP B . n C 2 220 LEU 220 720 720 LEU LEU B . n C 2 221 TYR 221 721 721 TYR TYR B . n C 2 222 LEU 222 722 722 LEU LEU B . n C 2 223 THR 223 723 723 THR THR B . n C 2 224 GLY 224 724 724 GLY GLY B . n C 2 225 THR 225 725 725 THR THR B . n C 2 226 ALA 226 726 726 ALA ALA B . n C 2 227 GLU 227 727 727 GLU GLU B . n C 2 228 VAL 228 728 728 VAL VAL B . n C 2 229 VAL 229 729 729 VAL VAL B . n C 2 230 LEU 230 730 730 LEU LEU B . n C 2 231 ASN 231 731 731 ASN ASN B . n C 2 232 ALA 232 732 732 ALA ALA B . n C 2 233 LEU 233 733 733 LEU LEU B . n C 2 234 HIS 234 734 734 HIS HIS B . n C 2 235 SER 235 735 735 SER SER B . n C 2 236 GLY 236 736 736 GLY GLY B . n C 2 237 GLU 237 737 737 GLU GLU B . n C 2 238 ILE 238 738 738 ILE ILE B . n C 2 239 LEU 239 739 739 LEU LEU B . n C 2 240 PRO 240 740 740 PRO PRO B . n C 2 241 TYR 241 741 741 TYR TYR B . n C 2 242 GLU 242 742 742 GLU GLU B . n C 2 243 ALA 243 743 743 ALA ALA B . n C 2 244 LEU 244 744 744 LEU LEU B . n C 2 245 PRO 245 745 745 PRO PRO B . n C 2 246 LEU 246 746 746 LEU LEU B . n C 2 247 ARG 247 747 747 ARG ARG B . n C 2 248 TYR 248 748 748 TYR TYR B . n C 2 249 ALA 249 749 749 ALA ALA B . n C 2 250 GLY 250 750 750 GLY GLY B . n C 2 251 TYR 251 751 751 TYR TYR B . n C 2 252 ALA 252 752 752 ALA ALA B . n C 2 253 PRO 253 753 753 PRO PRO B . n C 2 254 ALA 254 754 754 ALA ALA B . n C 2 255 PHE 255 755 755 PHE PHE B . n C 2 256 ARG 256 756 756 ARG ARG B . n C 2 257 SER 257 757 757 SER SER B . n C 2 258 GLU 258 758 758 GLU GLU B . n C 2 259 ALA 259 759 759 ALA ALA B . n C 2 260 GLY 260 760 760 GLY GLY B . n C 2 261 SER 261 761 761 SER SER B . n C 2 262 PHE 262 762 762 PHE PHE B . n C 2 263 GLY 263 763 763 GLY GLY B . n C 2 264 LYS 264 764 764 LYS LYS B . n C 2 265 ASP 265 765 765 ASP ASP B . n C 2 266 VAL 266 766 766 VAL VAL B . n C 2 267 ARG 267 767 767 ARG ARG B . n C 2 268 GLY 268 768 768 GLY GLY B . n C 2 269 LEU 269 769 769 LEU LEU B . n C 2 270 MET 270 770 770 MET MET B . n C 2 271 ARG 271 771 771 ARG ARG B . n C 2 272 VAL 272 772 772 VAL VAL B . n C 2 273 HIS 273 773 773 HIS HIS B . n C 2 274 GLN 274 774 774 GLN GLN B . n C 2 275 PHE 275 775 775 PHE PHE B . n C 2 276 HIS 276 776 776 HIS HIS B . n C 2 277 LYS 277 777 777 LYS LYS B . n C 2 278 VAL 278 778 778 VAL VAL B . n C 2 279 GLU 279 779 779 GLU GLU B . n C 2 280 GLN 280 780 780 GLN GLN B . n C 2 281 TYR 281 781 781 TYR TYR B . n C 2 282 VAL 282 782 782 VAL VAL B . n C 2 283 LEU 283 783 783 LEU LEU B . n C 2 284 THR 284 784 784 THR THR B . n C 2 285 GLU 285 785 785 GLU GLU B . n C 2 286 ALA 286 786 786 ALA ALA B . n C 2 287 SER 287 787 787 SER SER B . n C 2 288 LEU 288 788 788 LEU LEU B . n C 2 289 GLU 289 789 789 GLU GLU B . n C 2 290 ALA 290 790 790 ALA ALA B . n C 2 291 SER 291 791 791 SER SER B . n C 2 292 ASP 292 792 792 ASP ASP B . n C 2 293 ARG 293 793 793 ARG ARG B . n C 2 294 ALA 294 794 794 ALA ALA B . n C 2 295 PHE 295 795 795 PHE PHE B . n C 2 296 GLN 296 796 796 GLN GLN B . n C 2 297 GLU 297 797 797 GLU GLU B . n C 2 298 LEU 298 798 798 LEU LEU B . n C 2 299 LEU 299 799 799 LEU LEU B . n C 2 300 GLU 300 800 800 GLU GLU B . n C 2 301 ASN 301 801 801 ASN ASN B . n C 2 302 ALA 302 802 802 ALA ALA B . n C 2 303 GLU 303 803 803 GLU GLU B . n C 2 304 GLU 304 804 804 GLU GLU B . n C 2 305 ILE 305 805 805 ILE ILE B . n C 2 306 LEU 306 806 806 LEU LEU B . n C 2 307 ARG 307 807 807 ARG ARG B . n C 2 308 LEU 308 808 808 LEU LEU B . n C 2 309 LEU 309 809 809 LEU LEU B . n C 2 310 GLU 310 810 810 GLU GLU B . n C 2 311 LEU 311 811 811 LEU LEU B . n C 2 312 PRO 312 812 812 PRO PRO B . n C 2 313 TYR 313 813 813 TYR TYR B . n C 2 314 ARG 314 814 814 ARG ARG B . n C 2 315 LEU 315 815 815 LEU LEU B . n C 2 316 VAL 316 816 816 VAL VAL B . n C 2 317 GLU 317 817 817 GLU GLU B . n C 2 318 VAL 318 818 818 VAL VAL B . n C 2 319 ALA 319 819 819 ALA ALA B . n C 2 320 THR 320 820 820 THR THR B . n C 2 321 GLY 321 821 821 GLY GLY B . n C 2 322 ASP 322 822 822 ASP ASP B . n C 2 323 MET 323 823 823 MET MET B . n C 2 324 GLY 324 824 824 GLY GLY B . n C 2 325 PRO 325 825 825 PRO PRO B . n C 2 326 GLY 326 826 826 GLY GLY B . n C 2 327 LYS 327 827 827 LYS LYS B . n C 2 328 TRP 328 828 828 TRP TRP B . n C 2 329 ARG 329 829 829 ARG ARG B . n C 2 330 GLN 330 830 830 GLN GLN B . n C 2 331 VAL 331 831 831 VAL VAL B . n C 2 332 ASP 332 832 832 ASP ASP B . n C 2 333 ILE 333 833 833 ILE ILE B . n C 2 334 GLU 334 834 834 GLU GLU B . n C 2 335 VAL 335 835 835 VAL VAL B . n C 2 336 TYR 336 836 836 TYR TYR B . n C 2 337 LEU 337 837 837 LEU LEU B . n C 2 338 PRO 338 838 838 PRO PRO B . n C 2 339 SER 339 839 839 SER SER B . n C 2 340 GLU 340 840 840 GLU GLU B . n C 2 341 GLY 341 841 841 GLY GLY B . n C 2 342 ARG 342 842 842 ARG ARG B . n C 2 343 TYR 343 843 843 TYR TYR B . n C 2 344 ARG 344 844 844 ARG ARG B . n C 2 345 GLU 345 845 845 GLU GLU B . n C 2 346 THR 346 846 846 THR THR B . n C 2 347 HIS 347 847 847 HIS HIS B . n C 2 348 SER 348 848 848 SER SER B . n C 2 349 CYS 349 849 849 CYS CYS B . n C 2 350 SER 350 850 850 SER SER B . n C 2 351 ALA 351 851 851 ALA ALA B . n C 2 352 LEU 352 852 852 LEU LEU B . n C 2 353 LEU 353 853 853 LEU LEU B . n C 2 354 ASP 354 854 854 ASP ASP B . n C 2 355 TRP 355 855 855 TRP TRP B . n C 2 356 GLN 356 856 856 GLN GLN B . n C 2 357 ALA 357 857 857 ALA ALA B . n C 2 358 ARG 358 858 858 ARG ARG B . n C 2 359 ARG 359 859 859 ARG ARG B . n C 2 360 ALA 360 860 860 ALA ALA B . n C 2 361 ASN 361 861 861 ASN ASN B . n C 2 362 LEU 362 862 862 LEU LEU B . n C 2 363 ARG 363 863 863 ARG ARG B . n C 2 364 TYR 364 864 864 TYR TYR B . n C 2 365 ARG 365 865 865 ARG ARG B . n C 2 366 ASP 366 866 866 ASP ASP B . n C 2 367 PRO 367 867 867 PRO PRO B . n C 2 368 GLU 368 868 868 GLU GLU B . n C 2 369 GLY 369 869 869 GLY GLY B . n C 2 370 ARG 370 870 870 ARG ARG B . n C 2 371 VAL 371 871 871 VAL VAL B . n C 2 372 ARG 372 872 872 ARG ARG B . n C 2 373 TYR 373 873 873 TYR TYR B . n C 2 374 ALA 374 874 874 ALA ALA B . n C 2 375 TYR 375 875 875 TYR TYR B . n C 2 376 THR 376 876 876 THR THR B . n C 2 377 LEU 377 877 877 LEU LEU B . n C 2 378 ASN 378 878 878 ASN ASN B . n C 2 379 ASN 379 879 879 ASN ASN B . n C 2 380 THR 380 880 880 THR THR B . n C 2 381 ALA 381 881 881 ALA ALA B . n C 2 382 LEU 382 882 882 LEU LEU B . n C 2 383 ALA 383 883 883 ALA ALA B . n C 2 384 THR 384 884 884 THR THR B . n C 2 385 PRO 385 885 885 PRO PRO B . n C 2 386 ARG 386 886 886 ARG ARG B . n C 2 387 ILE 387 887 887 ILE ILE B . n C 2 388 LEU 388 888 888 LEU LEU B . n C 2 389 ALA 389 889 889 ALA ALA B . n C 2 390 MET 390 890 890 MET MET B . n C 2 391 LEU 391 891 891 LEU LEU B . n C 2 392 LEU 392 892 892 LEU LEU B . n C 2 393 GLU 393 893 893 GLU GLU B . n C 2 394 ASN 394 894 894 ASN ASN B . n C 2 395 HIS 395 895 895 HIS HIS B . n C 2 396 GLN 396 896 896 GLN GLN B . n C 2 397 LEU 397 897 897 LEU LEU B . n C 2 398 GLN 398 898 898 GLN GLN B . n C 2 399 ASP 399 899 899 ASP ASP B . n C 2 400 GLY 400 900 900 GLY GLY B . n C 2 401 ARG 401 901 901 ARG ARG B . n C 2 402 VAL 402 902 902 VAL VAL B . n C 2 403 ARG 403 903 903 ARG ARG B . n C 2 404 VAL 404 904 904 VAL VAL B . n C 2 405 PRO 405 905 905 PRO PRO B . n C 2 406 GLN 406 906 906 GLN GLN B . n C 2 407 ALA 407 907 907 ALA ALA B . n C 2 408 LEU 408 908 908 LEU LEU B . n C 2 409 ILE 409 909 909 ILE ILE B . n C 2 410 PRO 410 910 910 PRO PRO B . n C 2 411 TYR 411 911 911 TYR TYR B . n C 2 412 MET 412 912 912 MET MET B . n C 2 413 GLY 413 913 913 GLY GLY B . n C 2 414 LYS 414 914 914 LYS LYS B . n C 2 415 GLU 415 915 915 GLU GLU B . n C 2 416 VAL 416 916 916 VAL VAL B . n C 2 417 LEU 417 917 917 LEU LEU B . n C 2 418 GLU 418 918 918 GLU GLU B . n C 2 419 PRO 419 919 919 PRO PRO B . n C 2 420 CYS 420 920 920 CYS CYS B . n C 2 421 GLY 421 921 921 GLY GLY B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 HOH 1 936 936 HOH HOH T . E 3 HOH 1 925 925 HOH HOH A . E 3 HOH 2 933 933 HOH HOH A . E 3 HOH 3 935 935 HOH HOH A . E 3 HOH 4 937 937 HOH HOH A . E 3 HOH 5 944 944 HOH HOH A . E 3 HOH 6 945 945 HOH HOH A . E 3 HOH 7 949 949 HOH HOH A . E 3 HOH 8 951 951 HOH HOH A . E 3 HOH 9 955 955 HOH HOH A . E 3 HOH 10 958 958 HOH HOH A . E 3 HOH 11 963 963 HOH HOH A . E 3 HOH 12 966 966 HOH HOH A . E 3 HOH 13 970 970 HOH HOH A . E 3 HOH 14 971 971 HOH HOH A . F 3 HOH 1 923 923 HOH HOH B . F 3 HOH 2 924 924 HOH HOH B . F 3 HOH 3 926 926 HOH HOH B . F 3 HOH 4 927 927 HOH HOH B . F 3 HOH 5 928 928 HOH HOH B . F 3 HOH 6 929 929 HOH HOH B . F 3 HOH 7 930 930 HOH HOH B . F 3 HOH 8 931 931 HOH HOH B . F 3 HOH 9 932 932 HOH HOH B . F 3 HOH 10 940 940 HOH HOH B . F 3 HOH 11 941 941 HOH HOH B . F 3 HOH 12 943 943 HOH HOH B . F 3 HOH 13 946 946 HOH HOH B . F 3 HOH 14 947 947 HOH HOH B . F 3 HOH 15 948 948 HOH HOH B . F 3 HOH 16 953 953 HOH HOH B . F 3 HOH 17 954 954 HOH HOH B . F 3 HOH 18 957 957 HOH HOH B . F 3 HOH 19 959 959 HOH HOH B . F 3 HOH 20 960 960 HOH HOH B . F 3 HOH 21 962 962 HOH HOH B . F 3 HOH 22 964 964 HOH HOH B . F 3 HOH 23 967 967 HOH HOH B . F 3 HOH 24 969 969 HOH HOH B . F 3 HOH 25 972 972 HOH HOH B . F 3 HOH 26 974 974 HOH HOH B . F 3 HOH 27 976 976 HOH HOH B . F 3 HOH 28 977 977 HOH HOH B . F 3 HOH 29 978 978 HOH HOH B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 T U 16 ? N1 ? A U 16 N1 2 1 Y 0 T U 16 ? C2 ? A U 16 C2 3 1 Y 0 T U 16 ? O2 ? A U 16 O2 4 1 Y 0 T U 16 ? N3 ? A U 16 N3 5 1 Y 0 T U 16 ? C4 ? A U 16 C4 6 1 Y 0 T U 16 ? O4 ? A U 16 O4 7 1 Y 0 T U 16 ? C5 ? A U 16 C5 8 1 Y 0 T U 16 ? C6 ? A U 16 C6 9 1 Y 0 T G 24 ? N9 ? A G 25 N9 10 1 Y 0 T G 24 ? C8 ? A G 25 C8 11 1 Y 0 T G 24 ? N7 ? A G 25 N7 12 1 Y 0 T G 24 ? C5 ? A G 25 C5 13 1 Y 0 T G 24 ? C6 ? A G 25 C6 14 1 Y 0 T G 24 ? O6 ? A G 25 O6 15 1 Y 0 T G 24 ? N1 ? A G 25 N1 16 1 Y 0 T G 24 ? C2 ? A G 25 C2 17 1 Y 0 T G 24 ? N2 ? A G 25 N2 18 1 Y 0 T G 24 ? N3 ? A G 25 N3 19 1 Y 0 T G 24 ? C4 ? A G 25 C4 20 1 Y 0 T G 25 ? N9 ? A G 26 N9 21 1 Y 0 T G 25 ? C8 ? A G 26 C8 22 1 Y 0 T G 25 ? N7 ? A G 26 N7 23 1 Y 0 T G 25 ? C5 ? A G 26 C5 24 1 Y 0 T G 25 ? C6 ? A G 26 C6 25 1 Y 0 T G 25 ? O6 ? A G 26 O6 26 1 Y 0 T G 25 ? N1 ? A G 26 N1 27 1 Y 0 T G 25 ? C2 ? A G 26 C2 28 1 Y 0 T G 25 ? N2 ? A G 26 N2 29 1 Y 0 T G 25 ? N3 ? A G 26 N3 30 1 Y 0 T G 25 ? C4 ? A G 26 C4 31 1 Y 1 T A 26 ? "C3'" ? A A 27 "C3'" 32 1 Y 1 T A 26 ? "O3'" ? A A 27 "O3'" 33 1 Y 1 T A 26 ? "C2'" ? A A 27 "C2'" 34 1 Y 1 T A 26 ? "O2'" ? A A 27 "O2'" 35 1 Y 1 T A 26 ? N9 ? A A 27 N9 36 1 Y 1 T A 26 ? C8 ? A A 27 C8 37 1 Y 1 T A 26 ? N7 ? A A 27 N7 38 1 Y 1 T A 26 ? C5 ? A A 27 C5 39 1 Y 1 T A 26 ? C6 ? A A 27 C6 40 1 Y 1 T A 26 ? N6 ? A A 27 N6 41 1 Y 1 T A 26 ? N1 ? A A 27 N1 42 1 Y 1 T A 26 ? C2 ? A A 27 C2 43 1 Y 1 T A 26 ? N3 ? A A 27 N3 44 1 Y 1 T A 26 ? C4 ? A A 27 C4 45 1 Y 0 T G 42 ? N9 ? A G 42 N9 46 1 Y 0 T G 42 ? C8 ? A G 42 C8 47 1 Y 0 T G 42 ? N7 ? A G 42 N7 48 1 Y 0 T G 42 ? C5 ? A G 42 C5 49 1 Y 0 T G 42 ? C6 ? A G 42 C6 50 1 Y 0 T G 42 ? O6 ? A G 42 O6 51 1 Y 0 T G 42 ? N1 ? A G 42 N1 52 1 Y 0 T G 42 ? C2 ? A G 42 C2 53 1 Y 0 T G 42 ? N2 ? A G 42 N2 54 1 Y 0 T G 42 ? N3 ? A G 42 N3 55 1 Y 0 T G 42 ? C4 ? A G 42 C4 56 1 Y 0 T G 43 ? N9 ? A G 44 N9 57 1 Y 0 T G 43 ? C8 ? A G 44 C8 58 1 Y 0 T G 43 ? N7 ? A G 44 N7 59 1 Y 0 T G 43 ? C5 ? A G 44 C5 60 1 Y 0 T G 43 ? C6 ? A G 44 C6 61 1 Y 0 T G 43 ? O6 ? A G 44 O6 62 1 Y 0 T G 43 ? N1 ? A G 44 N1 63 1 Y 0 T G 43 ? C2 ? A G 44 C2 64 1 Y 0 T G 43 ? N2 ? A G 44 N2 65 1 Y 0 T G 43 ? N3 ? A G 44 N3 66 1 Y 0 T G 43 ? C4 ? A G 44 C4 67 1 Y 0 T C 47 K N1 ? A C 59 N1 68 1 Y 0 T C 47 K C2 ? A C 59 C2 69 1 Y 0 T C 47 K O2 ? A C 59 O2 70 1 Y 0 T C 47 K N3 ? A C 59 N3 71 1 Y 0 T C 47 K C4 ? A C 59 C4 72 1 Y 0 T C 47 K N4 ? A C 59 N4 73 1 Y 0 T C 47 K C5 ? A C 59 C5 74 1 Y 0 T C 47 K C6 ? A C 59 C6 # _software.name X-PLOR _software.classification refinement _software.version . _software.citation_id ? _software.pdbx_ordinal 1 # _cell.entry_id 1SER _cell.length_a 124.500 _cell.length_b 128.900 _cell.length_c 121.200 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1SER _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # _exptl.entry_id 1SER _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 68.08 _exptl_crystal.density_Matthews 3.85 _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _refine.entry_id 1SER _refine.ls_number_reflns_obs 39713 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.500 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 10.000 _refine.ls_d_res_high 2.900 _refine.ls_percent_reflns_obs 92.900 _refine.ls_R_factor_obs 0.1940000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1940000 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ;SERYL-TRNA SYNTHETASE IS A CLASS 2 AMINOACYL-TRNA SYNTHETASE. SERYL-TRNA SYNTHETASE FROM T. THERMOPHILUS IS AN HOMO-DIMER WITH 421 RESIDUES PER SUBUNIT. MONOMER 1 (IDENTIFIER SST1) HAS RESIDUES 1 - 421. RESIDUES 39 - 87 ARE ABSENT IN THE ELECTRON DENSITY OF THIS STRUCTURE DUE TO DISORDER. RESIDUES 261 - 264 ARE ABSENT FROM THE ELECTRON DENSITY BUT ARE INCLUDED IN THE MODEL WITZ ZERO OCCUPANCY MONOMER 2 (IDENTIFIER SST2) HAS RESIDUES 501 - 921. THE NON-CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATION PRESENTED ON *MTRIX* RECORDS BELOW WILL YIELD APPROXIMATE COORDINATES FOR CHAIN B (MONOMER 2) WHEN APPLIED TO CHAIN A (MONOMER 1). THERE IS ONLY ONE TRNA MOLECULE (IDENTIFIER TRN1) COMPLEXED WITH THE DIMERIC SYNTHETASE IN THIS STRUCTURE. THIS IS DESIGNATED TRNASER2 WITH ANTICODON GGA AND IT CONTAINS 94 NUCLEOTIDES. NUCLEOTIDES ARE NUMBERED 1 - 16, 18 - 20, 20A, 20B, 21 - 47, 47A - 47Q, 48 - 76. NUCLEOTIDES 45 - 47Q CONSTITUTE THE LONG VARIABLE ARM OF THE TRNA. THE SEQUENCE IS (APART FROM MODIFIED BASES): GUA 001 GUA 002 ADE 003 GUA 004 ADE 005 GUA 006 GUA 007 URI 008 GUA 009 CYT 010 CYT 011 CYT 012 GUA 013 ADE 014 GUA 015 URI 016 GUA 018 GUA 019 CYT 020 DHU 20A GUA 20B ADE 021 ADE 022 GUA 023 GUA 024 GUA 025 ADE 026 CYT 027 ADE 028 CYT 029 GUA 030 ADE 031 CYT 032 URI 033 GUA 034 GUA 035 ADE 036 ADE 037 ADE 038 URI 039 CYT 040 GUA 041 URI 042 GUA 043 URI 044 ADE 045 GUA 046 GUA 047 GUA 47A GUA 47B GUA 47C GUA 47D CYT 47E URI 47F URI 47G ADE 47H ADE 47I ADE 47J CYT 47K CYT 47L URI 47M CYT 47N CYT 47O CYT 47P URI 47Q CYT 048 GUA 049 CYT 050 GUA 051 GUA 052 GUA 053 THY 054 PSU 055 CYT 056 GUA 057 ADE 058 ADE 059 URI 060 CYT 061 CYT 062 CYT 063 GUA 064 CYT 065 CYT 066 CYT 067 URI 068 CYT 069 URI 070 CYT 071 CYT 072 GUA 073 CYT 074 CYT 075 ADE 076 IN THE CRYSTAL STRUCTURE SIGNIFICANT PARTS OF THE TRNA ARE MISSING FROM THE ELECTRON DENSITY DUE TO DISORDER. THEREFORE COORDINATES ARE NOT GIVEN FOR NUCLEOTIDES 1 - 3, 26 - 41, 47E - 47J, 72 - 76. TRNA RIBOSES G 7, G 9, G 18, G 19, C 20, D 20A, G 20B, C 48, A 58 AND U 60 HAVE BEEN CONSTRAINED TO 2'ENDO PUCKER. ALL OTHERS ARE 3' ENDO. ; _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 6355 _refine_hist.pdbx_number_atoms_nucleic_acid 1381 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 44 _refine_hist.number_atoms_total 7780 _refine_hist.d_res_high 2.900 _refine_hist.d_res_low 10.000 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.015 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 3.30 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _struct_ncs_oper.id 1 _struct_ncs_oper.code given _struct_ncs_oper.details ? _struct_ncs_oper.matrix[1][1] -0.630670 _struct_ncs_oper.matrix[1][2] -0.180360 _struct_ncs_oper.matrix[1][3] -0.754800 _struct_ncs_oper.matrix[2][1] -0.171680 _struct_ncs_oper.matrix[2][2] -0.916090 _struct_ncs_oper.matrix[2][3] 0.362350 _struct_ncs_oper.matrix[3][1] -0.756830 _struct_ncs_oper.matrix[3][2] 0.358110 _struct_ncs_oper.matrix[3][3] 0.546790 _struct_ncs_oper.vector[1] 232.72008 _struct_ncs_oper.vector[2] 88.27364 _struct_ncs_oper.vector[3] 93.03900 # _database_PDB_matrix.entry_id 1SER _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1SER _struct.title 'THE 2.9 ANGSTROMS CRYSTAL STRUCTURE OF T. THERMOPHILUS SERYL-TRNA SYNTHETASE COMPLEXED WITH TRNA SER' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1SER _struct_keywords.pdbx_keywords LIGASE/RNA _struct_keywords.text 'PROTEIN-T-RNA COMPLEX, LIGASE-RNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP SYS_THETH P34945 2 ;MVDLKRLRQEPEVFHRAIREKGVALDLEALLALDREVQELKKRLQEVQTERNQVAKRVPKAPPEEKEALIARGKALGEEA KRLEEALREKEARLEALLLQVPLPPWPGAPVGGEEANREIKRVGGPPEFSFPPLDHVALMEKNGWWEPRISQVSGSRSYA LKGDLALYELALLRFAMDFMARRGFLPMTLPSYAREKAFLGTGHFPATRDQVWAIAETDLYLTGTAEVVLNALHSGEILP YEALPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDRAFQELLENAEEILRLLELPYRLVEVAT GDMGPGKWRQVDIEVYLPSEGRYRETHSCSALLDWQARRANLRYRDPEGRVRYAYTLNNTALATPRILAMLLENHQLQDG RVRVPQALIPYMGKEVLEPCG ; 1 ? 2 PDB 1SER 1SER 1 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1SER A 1 ? 421 ? P34945 1 ? 421 ? 1 421 2 1 1SER B 1 ? 421 ? P34945 1 ? 421 ? 501 921 3 2 1SER T 1 ? 94 ? 1SER 1 ? 76 ? 1 76 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1SER TYR A 208 ? UNP P34945 THR 208 conflict 208 1 2 1SER TYR B 208 ? UNP P34945 THR 208 conflict 708 2 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ;THE MATRIX PRESENTED IN *MTRIX* RECORDS BELOW IS THE ORTHOGONAL TRANSFORMATION TO GO FROM MONOMER 1 TO MONOMER 2 OF THE SYNTHETASE BASED ON SIMULTANEOUS SUPERPOSITION OF C-ALPHAS OF RESIDUES A 100 - 258 ON B 600 - 758 AND A 270 - 419 ON B 770 - 919. ; # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 A1 LEU B 4 ? GLN B 9 ? LEU A 4 GLN A 9 1 'MONOMER #1' 6 HELX_P HELX_P2 A2 GLU B 12 ? LYS B 21 ? GLU A 12 LYS A 21 1 ? 10 HELX_P HELX_P3 A3 LEU B 27 ? GLU B 36 ? LEU A 27 GLU A 36 1 ? 10 HELX_P HELX_P4 A4 LYS B 90 ? LEU B 98 ? LYS A 90 LEU A 98 1 ? 9 HELX_P HELX_P5 G1 GLU B 114 ? ALA B 116 ? GLU A 114 ALA A 116 5 ? 3 HELX_P HELX_P6 A5 HIS B 136 ? ASN B 143 ? HIS A 136 ASN A 143 1 ? 8 HELX_P HELX_P7 A6 ILE B 150 ? VAL B 153 ? ILE A 150 VAL A 153 1 ? 4 HELX_P HELX_P8 A7 GLY B 163 ? ARG B 182 ? GLY A 163 ARG A 182 1 ? 20 HELX_P HELX_P9 A8 GLU B 196 ? THR B 202 ? GLU A 196 THR A 202 1 ? 7 HELX_P HELX_P10 G2 ARG B 209 ? GLN B 211 ? ARG A 209 GLN A 211 5 ? 3 HELX_P HELX_P11 A9 GLU B 227 ? ALA B 232 ? GLU A 227 ALA A 232 1 ? 6 HELX_P HELX_P12 A10 LEU B 288 ? LEU B 309 ? LEU A 288 LEU A 309 1 ? 22 HELX_P HELX_P13 A11 THR B 320 ? MET B 323 ? THR A 320 MET A 323 1 ? 4 HELX_P HELX_P14 G3 GLN B 406 ? LEU B 408 ? GLN A 406 LEU A 408 5 ? 3 HELX_P HELX_P15 A13 ILE B 409 ? MET B 412 ? ILE A 409 MET A 412 1 'END OF MONOMER #1' 4 HELX_P HELX_P16 B1 LEU C 4 ? GLN C 9 ? LEU B 504 GLN B 509 1 'MONOMER #2' 6 HELX_P HELX_P17 B2 PRO C 11 ? GLU C 20 ? PRO B 511 GLU B 520 1 ? 10 HELX_P HELX_P18 B3 LEU C 27 ? ARG C 57 ? LEU B 527 ARG B 557 1 ? 31 HELX_P HELX_P19 B4 GLU C 65 ? LEU C 98 ? GLU B 565 LEU B 598 1 ? 34 HELX_P HELX_P20 G1 GLU C 114 ? ALA C 116 ? GLU B 614 ALA B 616 5 ? 3 HELX_P HELX_P21 B5 HIS C 136 ? LYS C 142 ? HIS B 636 LYS B 642 1 ? 7 HELX_P HELX_P22 B6 ILE C 150 ? SER C 154 ? ILE B 650 SER B 654 1 ? 5 HELX_P HELX_P23 B7 ASP C 164 ? ARG C 182 ? ASP B 664 ARG B 682 1 ? 19 HELX_P HELX_P24 B8 GLU C 196 ? THR C 202 ? GLU B 696 THR B 702 1 ? 7 HELX_P HELX_P25 G2 ARG C 209 ? GLN C 211 ? ARG B 709 GLN B 711 5 ? 3 HELX_P HELX_P26 B9 GLU C 227 ? ALA C 232 ? GLU B 727 ALA B 732 1 ? 6 HELX_P HELX_P27 B10 LEU C 288 ? LEU C 309 ? LEU B 788 LEU B 809 1 ? 22 HELX_P HELX_P28 B11 THR C 320 ? MET C 323 ? THR B 820 MET B 823 1 ? 4 HELX_P HELX_P29 G3 PRO C 338 ? GLU C 340 ? PRO B 838 GLU B 840 5 ? 3 HELX_P HELX_P30 B12 ALA C 357 ? ALA C 360 ? ALA B 857 ALA B 860 1 ? 4 HELX_P HELX_P31 B13 ARG C 386 ? ASN C 394 ? ARG B 886 ASN B 894 1 ? 9 HELX_P HELX_P32 G4 GLN C 406 ? LEU C 408 ? GLN B 906 LEU B 908 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A H2U 20 P ? A ? 1_555 A C 19 "O3'" ? ? T H2U 20 T C 20 1_555 ? ? ? ? ? ? ? 1.615 ? ? covale2 covale both ? A H2U 20 "O3'" ? A ? 1_555 A G 21 P ? B T H2U 20 T G 20 1_555 ? ? ? ? ? ? ? 1.628 ? ? covale3 covale both ? A G 71 "O3'" ? ? ? 1_555 A 5MU 72 P ? ? T G 53 T 5MU 54 1_555 ? ? ? ? ? ? ? 1.640 ? ? covale4 covale both ? A 5MU 72 "O3'" ? ? ? 1_555 A PSU 73 P ? ? T 5MU 54 T PSU 55 1_555 ? ? ? ? ? ? ? 1.613 ? ? covale5 covale both ? A PSU 73 "O3'" ? ? ? 1_555 A C 74 P ? ? T PSU 55 T C 56 1_555 ? ? ? ? ? ? ? 1.639 ? ? hydrog1 hydrog ? ? A G 4 N1 ? ? ? 1_555 A C 87 N3 ? ? T G 4 T C 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 4 N2 ? ? ? 1_555 A C 87 O2 ? ? T G 4 T C 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 4 O6 ? ? ? 1_555 A C 87 N4 ? ? T G 4 T C 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A A 5 N1 ? ? ? 1_555 A U 86 N3 ? ? T A 5 T U 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A A 5 N6 ? ? ? 1_555 A U 86 O4 ? ? T A 5 T U 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 6 N1 ? ? ? 1_555 A C 85 N3 ? ? T G 6 T C 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A G 6 N2 ? ? ? 1_555 A C 85 O2 ? ? T G 6 T C 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A G 6 O6 ? ? ? 1_555 A C 85 N4 ? ? T G 6 T C 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A G 7 N1 ? ? ? 1_555 A C 84 N3 ? ? T G 7 T C 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A G 7 N2 ? ? ? 1_555 A C 84 O2 ? ? T G 7 T C 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A G 7 O6 ? ? ? 1_555 A C 84 N4 ? ? T G 7 T C 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A U 8 N3 ? ? ? 1_555 A A 14 N7 ? ? T U 8 T A 14 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog13 hydrog ? ? A U 8 O2 ? ? ? 1_555 A A 14 N6 ? ? T U 8 T A 14 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog14 hydrog ? ? A G 9 N7 ? ? ? 1_555 A G 13 N1 ? ? T G 9 T G 13 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog15 hydrog ? ? A G 9 O6 ? ? ? 1_555 A G 13 N2 ? ? T G 9 T G 13 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog16 hydrog ? ? A C 10 O2 ? ? ? 1_555 A G 26 N2 ? ? T C 10 T G 25 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog17 hydrog ? ? A C 11 O2 ? ? ? 1_555 A G 25 N1 ? ? T C 11 T G 24 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog18 hydrog ? ? A C 12 N3 ? ? ? 1_555 A G 24 N1 ? ? T C 12 T G 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A C 12 N4 ? ? ? 1_555 A G 24 O6 ? ? T C 12 T G 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A C 12 O2 ? ? ? 1_555 A G 24 N2 ? ? T C 12 T G 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A G 13 N2 ? ? ? 1_555 A A 23 N7 ? ? T G 13 T A 22 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog22 hydrog ? ? A G 13 N3 ? ? ? 1_555 A A 23 N6 ? ? T G 13 T A 22 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog23 hydrog ? ? A A 14 N6 ? ? ? 1_555 A A 22 N3 ? ? T A 14 T A 21 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog24 hydrog ? ? A G 15 N2 ? ? ? 1_555 A H2U 20 O2 ? A T G 15 T H2U 20 1_555 ? ? ? ? ? ? 'G-H2U MISPAIR' ? ? ? hydrog25 hydrog ? ? A G 15 N1 ? ? ? 1_555 A C 66 O2 ? ? T G 15 T C 48 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog26 hydrog ? ? A G 15 N2 ? ? ? 1_555 A C 66 N3 ? ? T G 15 T C 48 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog27 hydrog ? ? A G 17 N1 ? ? ? 1_555 A PSU 73 O4 ? ? T G 18 T PSU 55 1_555 ? ? ? ? ? ? 'G-PSU MISPAIR' ? ? ? hydrog28 hydrog ? ? A G 18 N1 ? ? ? 1_555 A C 74 N3 ? ? T G 19 T C 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A G 18 N2 ? ? ? 1_555 A C 74 O2 ? ? T G 19 T C 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A G 18 O6 ? ? ? 1_555 A C 74 N4 ? ? T G 19 T C 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A A 46 N1 ? ? ? 1_555 A U 65 N3 ? Q T A 45 T U 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A A 46 N6 ? ? ? 1_555 A U 65 O4 ? Q T A 45 T U 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A G 47 N1 ? ? ? 1_555 A C 64 N3 ? P T G 46 T C 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A G 47 N2 ? ? ? 1_555 A C 64 O2 ? P T G 46 T C 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A G 47 O6 ? ? ? 1_555 A C 64 N4 ? P T G 46 T C 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A G 48 N1 ? ? ? 1_555 A C 63 N3 ? O T G 47 T C 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A G 48 N2 ? ? ? 1_555 A C 63 O2 ? O T G 47 T C 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A G 48 O6 ? ? ? 1_555 A C 63 N4 ? O T G 47 T C 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A G 49 N1 ? A ? 1_555 A C 62 N3 ? N T G 47 T C 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A G 49 N2 ? A ? 1_555 A C 62 O2 ? N T G 47 T C 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A G 49 O6 ? A ? 1_555 A C 62 N4 ? N T G 47 T C 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A G 50 N1 ? B ? 1_555 A U 61 O2 ? M T G 47 T U 47 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog43 hydrog ? ? A G 50 O6 ? B ? 1_555 A U 61 N3 ? M T G 47 T U 47 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog44 hydrog ? ? A G 51 N1 ? C ? 1_555 A C 60 N3 ? L T G 47 T C 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A G 51 N2 ? C ? 1_555 A C 60 O2 ? L T G 47 T C 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A G 51 O6 ? C ? 1_555 A C 60 N4 ? L T G 47 T C 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A G 52 N1 ? D ? 1_555 A C 59 N3 ? K T G 47 T C 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A G 52 N2 ? D ? 1_555 A C 59 O2 ? K T G 47 T C 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A G 52 O6 ? D ? 1_555 A C 59 N4 ? K T G 47 T C 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A G 67 N1 ? ? ? 1_555 A C 83 N3 ? ? T G 49 T C 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A G 67 N2 ? ? ? 1_555 A C 83 O2 ? ? T G 49 T C 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A G 67 O6 ? ? ? 1_555 A C 83 N4 ? ? T G 49 T C 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? A C 68 N3 ? ? ? 1_555 A G 82 N1 ? ? T C 50 T G 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? A C 68 N4 ? ? ? 1_555 A G 82 O6 ? ? T C 50 T G 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? A C 68 O2 ? ? ? 1_555 A G 82 N2 ? ? T C 50 T G 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? A G 69 N1 ? ? ? 1_555 A C 81 N3 ? ? T G 51 T C 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? A G 69 N2 ? ? ? 1_555 A C 81 O2 ? ? T G 51 T C 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? A G 69 O6 ? ? ? 1_555 A C 81 N4 ? ? T G 51 T C 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? A G 70 N1 ? ? ? 1_555 A C 80 N3 ? ? T G 52 T C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? A G 70 N2 ? ? ? 1_555 A C 80 O2 ? ? T G 52 T C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? A G 70 O6 ? ? ? 1_555 A C 80 N4 ? ? T G 52 T C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? A G 71 N1 ? ? ? 1_555 A C 79 N3 ? ? T G 53 T C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? A G 71 N2 ? ? ? 1_555 A C 79 O2 ? ? T G 53 T C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? A G 71 O6 ? ? ? 1_555 A C 79 N4 ? ? T G 53 T C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? A 5MU 72 N3 ? ? ? 1_555 A A 76 N7 ? ? T 5MU 54 T A 58 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog66 hydrog ? ? A 5MU 72 O2 ? ? ? 1_555 A A 76 N6 ? ? T 5MU 54 T A 58 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 PHE 205 B . ? PHE 205 A PRO 206 B ? PRO 206 A 1 9.86 2 LEU 244 B . ? LEU 244 A PRO 245 B ? PRO 245 A 1 -3.74 3 THR 384 B . ? THR 384 A PRO 385 B ? PRO 385 A 1 4.06 4 PHE 205 C . ? PHE 705 B PRO 206 C ? PRO 706 B 1 -1.19 5 LEU 244 C . ? LEU 744 B PRO 245 C ? PRO 745 B 1 -15.80 6 THR 384 C . ? THR 884 B PRO 385 C ? PRO 885 B 1 3.13 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A1 ? 8 ? B1 ? 2 ? C1 ? 3 ? D1 ? 2 ? A2 ? 8 ? B2 ? 2 ? C2 ? 3 ? D2 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A1 1 2 ? anti-parallel A1 2 3 ? anti-parallel A1 3 4 ? anti-parallel A1 4 5 ? anti-parallel A1 5 6 ? anti-parallel A1 6 7 ? anti-parallel A1 7 8 ? parallel B1 1 2 ? anti-parallel C1 1 2 ? parallel C1 2 3 ? anti-parallel D1 1 2 ? anti-parallel A2 1 2 ? anti-parallel A2 2 3 ? anti-parallel A2 3 4 ? anti-parallel A2 4 5 ? anti-parallel A2 5 6 ? anti-parallel A2 6 7 ? anti-parallel A2 7 8 ? parallel B2 1 2 ? anti-parallel C2 1 2 ? parallel C2 2 3 ? anti-parallel D2 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A1 1 ARG B 118 ? VAL B 123 ? ARG A 118 VAL A 123 A1 2 TYR B 313 ? GLU B 317 ? TYR A 313 GLU A 317 A1 3 ARG B 329 ? LEU B 337 ? ARG A 329 LEU A 337 A1 4 ARG B 342 ? ALA B 351 ? ARG A 342 ALA A 351 A1 5 ALA B 374 ? THR B 384 ? ALA A 374 THR A 384 A1 6 GLN B 274 ? THR B 284 ? GLN A 274 THR A 284 A1 7 LEU B 246 ? PHE B 255 ? LEU A 246 PHE A 255 A1 8 LEU B 186 ? THR B 189 ? LEU A 186 THR A 189 B1 1 TYR B 193 ? ARG B 195 ? TYR A 193 ARG A 195 B1 2 LEU B 220 ? LEU B 222 ? LEU A 220 LEU A 222 C1 1 ILE B 238 ? PRO B 240 ? ILE A 238 PRO A 240 C1 2 ARG B 363 ? ARG B 365 ? ARG A 363 ARG A 365 C1 3 VAL B 371 ? TYR B 373 ? VAL A 371 TYR A 373 D1 1 VAL B 402 ? ARG B 403 ? VAL A 402 ARG A 403 D1 2 VAL B 416 ? LEU B 417 ? VAL A 416 LEU A 417 A2 1 ARG C 118 ? VAL C 123 ? ARG B 618 VAL B 623 A2 2 TYR C 313 ? GLU C 317 ? TYR B 813 GLU B 817 A2 3 ARG C 329 ? LEU C 337 ? ARG B 829 LEU B 837 A2 4 ARG C 342 ? ALA C 351 ? ARG B 842 ALA B 851 A2 5 ALA C 374 ? THR C 384 ? ALA B 874 THR B 884 A2 6 GLN C 274 ? THR C 284 ? GLN B 774 THR B 784 A2 7 LEU C 246 ? PHE C 255 ? LEU B 746 PHE B 755 A2 8 LEU C 186 ? THR C 189 ? LEU B 686 THR B 689 B2 1 TYR C 193 ? ARG C 195 ? TYR B 693 ARG B 695 B2 2 LEU C 220 ? LEU C 222 ? LEU B 720 LEU B 722 C2 1 ILE C 238 ? PRO C 240 ? ILE B 738 PRO B 740 C2 2 ARG C 363 ? ARG C 365 ? ARG B 863 ARG B 865 C2 3 VAL C 371 ? TYR C 373 ? VAL B 871 TYR B 873 D2 1 VAL C 402 ? ARG C 403 ? VAL B 902 ARG B 903 D2 2 VAL C 416 ? LEU C 417 ? VAL B 916 LEU B 917 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A1 1 2 O VAL B 123 ? O VAL A 123 N TYR B 313 ? N TYR A 313 A1 2 3 N ARG B 314 ? N ARG A 314 O GLU B 334 ? O GLU A 334 A1 3 4 N LEU B 337 ? N LEU A 337 O ARG B 342 ? O ARG A 342 A1 4 5 N SER B 350 ? N SER A 350 O ASN B 378 ? O ASN A 378 A1 5 6 N TYR B 375 ? N TYR A 375 O THR B 284 ? O THR A 284 A1 6 7 N LYS B 277 ? N LYS A 277 O ALA B 252 ? O ALA A 252 A1 7 8 O TYR B 251 ? O TYR A 251 N LEU B 190 ? N LEU A 190 B1 1 2 N ALA B 194 ? N ALA A 194 O TYR B 221 ? O TYR A 221 C1 1 2 N LEU B 239 ? N LEU A 239 O ARG B 363 ? O ARG A 363 C1 2 3 N TYR B 364 ? N TYR A 364 O ARG B 372 ? O ARG A 372 D1 1 2 O VAL B 402 ? O VAL A 402 N LEU B 417 ? N LEU A 417 A2 1 2 O VAL C 123 ? O VAL B 623 N TYR C 313 ? N TYR B 813 A2 2 3 N ARG C 314 ? N ARG B 814 O GLU C 334 ? O GLU B 834 A2 3 4 N LEU C 337 ? N LEU B 837 O ARG C 342 ? O ARG B 842 A2 4 5 N SER C 350 ? N SER B 850 O ASN C 378 ? O ASN B 878 A2 5 6 N TYR C 375 ? N TYR B 875 O THR C 284 ? O THR B 784 A2 6 7 N LYS C 277 ? N LYS B 777 O ALA C 252 ? O ALA B 752 A2 7 8 O TYR C 251 ? O TYR B 751 N LEU C 190 ? N LEU B 690 B2 1 2 N ALA C 194 ? N ALA B 694 O TYR C 221 ? O TYR B 721 C2 1 2 N LEU C 239 ? N LEU B 739 O ARG C 363 ? O ARG B 863 C2 2 3 N TYR C 364 ? N TYR B 864 O ARG C 372 ? O ARG B 872 D2 1 2 O VAL C 402 ? O VAL B 902 N LEU C 417 ? N LEU B 917 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 P T G 18 ? ? "O5'" T G 18 ? ? 1.655 1.593 0.062 0.010 N 2 1 "C2'" T G 18 ? ? "C1'" T G 18 ? ? 1.462 1.526 -0.064 0.008 N 3 1 "C5'" T G 47 ? ? "C4'" T G 47 ? ? 1.465 1.508 -0.043 0.007 N 4 1 P T C 50 ? ? "O5'" T C 50 ? ? 1.654 1.593 0.061 0.010 N 5 1 "C2'" T G 53 ? ? "C1'" T G 53 ? ? 1.477 1.526 -0.049 0.008 N 6 1 "C5'" T A 58 ? ? "C4'" T A 58 ? ? 1.585 1.509 0.076 0.012 N 7 1 NE2 A HIS 234 ? ? CD2 A HIS 234 ? ? 1.296 1.373 -0.077 0.011 N 8 1 NE2 A HIS 273 ? ? CD2 A HIS 273 ? ? 1.305 1.373 -0.068 0.011 N 9 1 NE2 A HIS 276 ? ? CD2 A HIS 276 ? ? 1.302 1.373 -0.071 0.011 N 10 1 NE2 A HIS 347 ? ? CD2 A HIS 347 ? ? 1.291 1.373 -0.082 0.011 N 11 1 NE2 B HIS 636 ? ? CD2 B HIS 636 ? ? 1.301 1.373 -0.072 0.011 N 12 1 NE2 B HIS 773 ? ? CD2 B HIS 773 ? ? 1.300 1.373 -0.073 0.011 N 13 1 NE2 B HIS 776 ? ? CD2 B HIS 776 ? ? 1.285 1.373 -0.088 0.011 N 14 1 NE2 B HIS 847 ? ? CD2 B HIS 847 ? ? 1.306 1.373 -0.067 0.011 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C5'" T G 4 ? ? "C4'" T G 4 ? ? "C3'" T G 4 ? ? 104.77 115.20 -10.43 1.40 N 2 1 "O5'" T G 6 ? ? "C5'" T G 6 ? ? "C4'" T G 6 ? ? 104.37 109.40 -5.03 0.80 N 3 1 "C5'" T G 7 ? ? "C4'" T G 7 ? ? "O4'" T G 7 ? ? 122.25 109.80 12.45 0.90 N 4 1 "O4'" T G 7 ? ? "C1'" T G 7 ? ? N9 T G 7 ? ? 114.13 108.50 5.63 0.70 N 5 1 N1 T C 10 ? ? C2 T C 10 ? ? O2 T C 10 ? ? 123.99 118.90 5.09 0.60 N 6 1 "C3'" T C 10 ? ? "O3'" T C 10 ? ? P T C 11 ? ? 127.33 119.70 7.63 1.20 Y 7 1 "O4'" T C 11 ? ? "C1'" T C 11 ? ? N1 T C 11 ? ? 112.75 108.50 4.25 0.70 N 8 1 N1 T C 11 ? ? C2 T C 11 ? ? O2 T C 11 ? ? 123.44 118.90 4.54 0.60 N 9 1 "O4'" T C 12 ? ? "C1'" T C 12 ? ? N1 T C 12 ? ? 112.96 108.50 4.46 0.70 N 10 1 "C5'" T G 13 ? ? "C4'" T G 13 ? ? "C3'" T G 13 ? ? 101.01 115.20 -14.19 1.40 N 11 1 "O4'" T A 14 ? ? "C1'" T A 14 ? ? N9 T A 14 ? ? 113.11 108.50 4.61 0.70 N 12 1 "O4'" T G 15 ? ? "C1'" T G 15 ? ? N9 T G 15 ? ? 116.62 108.50 8.12 0.70 N 13 1 N1 T U 16 ? ? "C1'" T U 16 ? ? "C2'" T U 16 ? ? 122.44 114.00 8.44 1.30 N 14 1 "O4'" T U 16 ? ? "C1'" T U 16 ? ? N1 T U 16 ? ? 96.58 108.20 -11.62 0.80 N 15 1 N1 T U 16 ? ? C2 T U 16 ? ? O2 T U 16 ? ? 127.01 122.80 4.21 0.70 N 16 1 N3 T U 16 ? ? C2 T U 16 ? ? O2 T U 16 ? ? 117.30 122.20 -4.90 0.70 N 17 1 C2 T U 16 ? ? N1 T U 16 ? ? "C1'" T U 16 ? ? 125.50 117.70 7.80 1.20 N 18 1 "C3'" T U 16 ? ? "O3'" T U 16 ? ? P T G 18 ? ? 127.75 119.70 8.05 1.20 Y 19 1 "C5'" T G 18 ? ? "C4'" T G 18 ? ? "O4'" T G 18 ? ? 120.20 109.80 10.40 0.90 N 20 1 "O4'" T G 18 ? ? "C1'" T G 18 ? ? N9 T G 18 ? ? 119.02 108.50 10.52 0.70 N 21 1 "O4'" T G 19 ? ? "C1'" T G 19 ? ? N9 T G 19 ? ? 100.64 108.20 -7.56 0.80 N 22 1 N1 T C 20 ? ? C2 T C 20 ? ? O2 T C 20 ? ? 124.34 118.90 5.44 0.60 N 23 1 N3 T C 20 ? ? C2 T C 20 ? ? O2 T C 20 ? ? 117.49 121.90 -4.41 0.70 N 24 1 "O4'" T G 20 B ? "C1'" T G 20 B ? N9 T G 20 B ? 101.83 108.20 -6.37 0.80 N 25 1 "O4'" T A 21 ? ? "C1'" T A 21 ? ? N9 T A 21 ? ? 113.51 108.50 5.01 0.70 N 26 1 "O4'" T A 22 ? ? "C1'" T A 22 ? ? N9 T A 22 ? ? 113.20 108.50 4.70 0.70 N 27 1 C8 T G 23 ? ? N9 T G 23 ? ? C4 T G 23 ? ? 103.93 106.40 -2.47 0.40 N 28 1 "C3'" T G 24 ? ? "O3'" T G 24 ? ? P T G 25 ? ? 130.15 119.70 10.45 1.20 Y 29 1 "C5'" T G 42 ? ? "C4'" T G 42 ? ? "O4'" T G 42 ? ? 115.79 109.80 5.99 0.90 N 30 1 "O4'" T G 42 ? ? "C1'" T G 42 ? ? N9 T G 42 ? ? 113.34 108.50 4.84 0.70 N 31 1 "C5'" T U 44 ? ? "C4'" T U 44 ? ? "C3'" T U 44 ? ? 103.86 115.20 -11.34 1.40 N 32 1 "C5'" T U 44 ? ? "C4'" T U 44 ? ? "O4'" T U 44 ? ? 116.71 109.80 6.91 0.90 N 33 1 "O3'" T U 44 ? ? P T A 45 ? ? "O5'" T A 45 ? ? 92.59 104.00 -11.41 1.90 Y 34 1 "C5'" T A 45 ? ? "C4'" T A 45 ? ? "O4'" T A 45 ? ? 116.52 109.80 6.72 0.90 N 35 1 C8 T A 45 ? ? N9 T A 45 ? ? C4 T A 45 ? ? 103.35 105.80 -2.45 0.40 N 36 1 "C3'" T A 45 ? ? "O3'" T A 45 ? ? P T G 46 ? ? 127.02 119.70 7.32 1.20 Y 37 1 "O4'" T G 46 ? ? "C1'" T G 46 ? ? N9 T G 46 ? ? 113.87 108.50 5.37 0.70 N 38 1 "O4'" T G 47 ? ? "C1'" T G 47 ? ? N9 T G 47 ? ? 113.75 108.50 5.25 0.70 N 39 1 "O4'" T G 47 C ? "C1'" T G 47 C ? N9 T G 47 C ? 116.35 108.50 7.85 0.70 N 40 1 N1 T C 47 K ? C2 T C 47 K ? O2 T C 47 K ? 122.65 118.90 3.75 0.60 N 41 1 N1 T C 47 L ? C2 T C 47 L ? O2 T C 47 L ? 122.74 118.90 3.84 0.60 N 42 1 N1 T C 47 O ? C2 T C 47 O ? O2 T C 47 O ? 124.06 118.90 5.16 0.60 N 43 1 N3 T C 47 O ? C2 T C 47 O ? O2 T C 47 O ? 116.75 121.90 -5.15 0.70 N 44 1 "C5'" T C 47 P ? "C4'" T C 47 P ? "O4'" T C 47 P ? 115.74 109.80 5.94 0.90 N 45 1 "O4'" T C 47 P ? "C1'" T C 47 P ? N1 T C 47 P ? 113.31 108.50 4.81 0.70 N 46 1 "O4'" T U 47 Q ? "C1'" T U 47 Q ? N1 T U 47 Q ? 116.73 108.50 8.23 0.70 N 47 1 N1 T C 50 ? ? C2 T C 50 ? ? O2 T C 50 ? ? 123.28 118.90 4.38 0.60 N 48 1 N3 T C 50 ? ? C2 T C 50 ? ? O2 T C 50 ? ? 117.66 121.90 -4.24 0.70 N 49 1 "C3'" T C 50 ? ? "O3'" T C 50 ? ? P T G 51 ? ? 127.17 119.70 7.47 1.20 Y 50 1 "O4'" T G 51 ? ? "C1'" T G 51 ? ? N9 T G 51 ? ? 113.27 108.50 4.77 0.70 N 51 1 "O4'" T G 52 ? ? "C1'" T G 52 ? ? N9 T G 52 ? ? 116.38 108.50 7.88 0.70 N 52 1 "O4'" T G 53 ? ? "C1'" T G 53 ? ? N9 T G 53 ? ? 113.04 108.50 4.54 0.70 N 53 1 N1 T C 56 ? ? C2 T C 56 ? ? O2 T C 56 ? ? 122.70 118.90 3.80 0.60 N 54 1 C8 T G 57 ? ? N9 T G 57 ? ? C4 T G 57 ? ? 103.88 106.40 -2.52 0.40 N 55 1 "O4'" T A 58 ? ? "C1'" T A 58 ? ? N9 T A 58 ? ? 113.45 108.50 4.95 0.70 N 56 1 "C3'" T A 59 ? ? "O3'" T A 59 ? ? P T U 60 ? ? 127.22 119.70 7.52 1.20 Y 57 1 "O4'" T C 61 ? ? "C1'" T C 61 ? ? N1 T C 61 ? ? 112.91 108.50 4.41 0.70 N 58 1 N1 T C 61 ? ? C2 T C 61 ? ? O2 T C 61 ? ? 123.03 118.90 4.13 0.60 N 59 1 N1 T C 63 ? ? C2 T C 63 ? ? O2 T C 63 ? ? 123.30 118.90 4.40 0.60 N 60 1 "O4'" T G 64 ? ? "C1'" T G 64 ? ? N9 T G 64 ? ? 114.58 108.50 6.08 0.70 N 61 1 N1 T C 65 ? ? C2 T C 65 ? ? O2 T C 65 ? ? 122.76 118.90 3.86 0.60 N 62 1 N1 T C 66 ? ? C2 T C 66 ? ? O2 T C 66 ? ? 123.33 118.90 4.43 0.60 N 63 1 N3 T C 66 ? ? C2 T C 66 ? ? O2 T C 66 ? ? 117.11 121.90 -4.79 0.70 N 64 1 "O4'" T C 69 ? ? "C1'" T C 69 ? ? N1 T C 69 ? ? 114.32 108.50 5.82 0.70 N 65 1 N1 T C 69 ? ? C2 T C 69 ? ? O2 T C 69 ? ? 124.32 118.90 5.42 0.60 N 66 1 N3 T C 69 ? ? C2 T C 69 ? ? O2 T C 69 ? ? 117.11 121.90 -4.79 0.70 N 67 1 "O4'" T C 71 ? ? "C1'" T C 71 ? ? N1 T C 71 ? ? 112.74 108.50 4.24 0.70 N 68 1 N1 T C 71 ? ? C2 T C 71 ? ? O2 T C 71 ? ? 123.97 118.90 5.07 0.60 N 69 1 CA A VAL 2 ? ? CB A VAL 2 ? ? CG2 A VAL 2 ? ? 101.87 110.90 -9.03 1.50 N 70 1 CD1 A TRP 106 ? ? CG A TRP 106 ? ? CD2 A TRP 106 ? ? 113.54 106.30 7.24 0.80 N 71 1 CE2 A TRP 106 ? ? CD2 A TRP 106 ? ? CG A TRP 106 ? ? 101.59 107.30 -5.71 0.80 N 72 1 NE A ARG 122 ? ? CZ A ARG 122 ? ? NH2 A ARG 122 ? ? 114.62 120.30 -5.68 0.50 N 73 1 CD1 A TRP 145 ? ? CG A TRP 145 ? ? CD2 A TRP 145 ? ? 113.04 106.30 6.74 0.80 N 74 1 CE2 A TRP 145 ? ? CD2 A TRP 145 ? ? CG A TRP 145 ? ? 101.58 107.30 -5.72 0.80 N 75 1 CD1 A TRP 146 ? ? CG A TRP 146 ? ? CD2 A TRP 146 ? ? 113.75 106.30 7.45 0.80 N 76 1 CE2 A TRP 146 ? ? CD2 A TRP 146 ? ? CG A TRP 146 ? ? 101.75 107.30 -5.55 0.80 N 77 1 NE A ARG 149 ? ? CZ A ARG 149 ? ? NH1 A ARG 149 ? ? 123.34 120.30 3.04 0.50 N 78 1 CB A TYR 168 ? ? CG A TYR 168 ? ? CD2 A TYR 168 ? ? 117.39 121.00 -3.61 0.60 N 79 1 CD1 A TRP 213 ? ? CG A TRP 213 ? ? CD2 A TRP 213 ? ? 111.38 106.30 5.08 0.80 N 80 1 CE2 A TRP 213 ? ? CD2 A TRP 213 ? ? CG A TRP 213 ? ? 101.84 107.30 -5.46 0.80 N 81 1 NE A ARG 247 ? ? CZ A ARG 247 ? ? NH2 A ARG 247 ? ? 116.83 120.30 -3.47 0.50 N 82 1 NE A ARG 307 ? ? CZ A ARG 307 ? ? NH2 A ARG 307 ? ? 116.99 120.30 -3.31 0.50 N 83 1 CD1 A TRP 328 ? ? CG A TRP 328 ? ? CD2 A TRP 328 ? ? 112.51 106.30 6.21 0.80 N 84 1 CE2 A TRP 328 ? ? CD2 A TRP 328 ? ? CG A TRP 328 ? ? 101.49 107.30 -5.81 0.80 N 85 1 NE A ARG 344 ? ? CZ A ARG 344 ? ? NH1 A ARG 344 ? ? 123.62 120.30 3.32 0.50 N 86 1 CA A CYS 349 ? ? CB A CYS 349 ? ? SG A CYS 349 ? ? 101.23 114.00 -12.77 1.80 N 87 1 CD1 A TRP 355 ? ? CG A TRP 355 ? ? CD2 A TRP 355 ? ? 112.87 106.30 6.57 0.80 N 88 1 CE2 A TRP 355 ? ? CD2 A TRP 355 ? ? CG A TRP 355 ? ? 101.21 107.30 -6.09 0.80 N 89 1 NE A ARG 359 ? ? CZ A ARG 359 ? ? NH2 A ARG 359 ? ? 117.27 120.30 -3.03 0.50 N 90 1 NE A ARG 363 ? ? CZ A ARG 363 ? ? NH1 A ARG 363 ? ? 123.97 120.30 3.67 0.50 N 91 1 NE A ARG 370 ? ? CZ A ARG 370 ? ? NH1 A ARG 370 ? ? 123.35 120.30 3.05 0.50 N 92 1 NE A ARG 403 ? ? CZ A ARG 403 ? ? NH2 A ARG 403 ? ? 116.95 120.30 -3.35 0.50 N 93 1 NE B ARG 508 ? ? CZ B ARG 508 ? ? NH1 B ARG 508 ? ? 123.85 120.30 3.55 0.50 N 94 1 N B GLU 520 ? ? CA B GLU 520 ? ? CB B GLU 520 ? ? 99.60 110.60 -11.00 1.80 N 95 1 CA B LEU 530 ? ? CB B LEU 530 ? ? CG B LEU 530 ? ? 131.66 115.30 16.36 2.30 N 96 1 NE B ARG 557 ? ? CZ B ARG 557 ? ? NH1 B ARG 557 ? ? 123.48 120.30 3.18 0.50 N 97 1 NE B ARG 588 ? ? CZ B ARG 588 ? ? NH1 B ARG 588 ? ? 124.13 120.30 3.83 0.50 N 98 1 NE B ARG 588 ? ? CZ B ARG 588 ? ? NH2 B ARG 588 ? ? 117.17 120.30 -3.13 0.50 N 99 1 CD1 B TRP 606 ? ? CG B TRP 606 ? ? CD2 B TRP 606 ? ? 113.58 106.30 7.28 0.80 N 100 1 CE2 B TRP 606 ? ? CD2 B TRP 606 ? ? CG B TRP 606 ? ? 101.09 107.30 -6.21 0.80 N 101 1 NE B ARG 622 ? ? CZ B ARG 622 ? ? NH1 B ARG 622 ? ? 123.95 120.30 3.65 0.50 N 102 1 CG B MET 640 ? ? SD B MET 640 ? ? CE B MET 640 ? ? 89.24 100.20 -10.96 1.60 N 103 1 CD1 B TRP 645 ? ? CG B TRP 645 ? ? CD2 B TRP 645 ? ? 111.59 106.30 5.29 0.80 N 104 1 CE2 B TRP 645 ? ? CD2 B TRP 645 ? ? CG B TRP 645 ? ? 102.13 107.30 -5.17 0.80 N 105 1 CD1 B TRP 646 ? ? CG B TRP 646 ? ? CD2 B TRP 646 ? ? 113.31 106.30 7.01 0.80 N 106 1 CE2 B TRP 646 ? ? CD2 B TRP 646 ? ? CG B TRP 646 ? ? 101.54 107.30 -5.76 0.80 N 107 1 NE B ARG 657 ? ? CZ B ARG 657 ? ? NH1 B ARG 657 ? ? 126.00 120.30 5.70 0.50 N 108 1 NE B ARG 657 ? ? CZ B ARG 657 ? ? NH2 B ARG 657 ? ? 113.89 120.30 -6.41 0.50 N 109 1 NE B ARG 674 ? ? CZ B ARG 674 ? ? NH1 B ARG 674 ? ? 124.29 120.30 3.99 0.50 N 110 1 NE B ARG 682 ? ? CZ B ARG 682 ? ? NH2 B ARG 682 ? ? 117.20 120.30 -3.10 0.50 N 111 1 NE B ARG 683 ? ? CZ B ARG 683 ? ? NH1 B ARG 683 ? ? 123.52 120.30 3.22 0.50 N 112 1 NE B ARG 695 ? ? CZ B ARG 695 ? ? NH2 B ARG 695 ? ? 116.01 120.30 -4.29 0.50 N 113 1 NE B ARG 709 ? ? CZ B ARG 709 ? ? NH1 B ARG 709 ? ? 123.42 120.30 3.12 0.50 N 114 1 NE B ARG 709 ? ? CZ B ARG 709 ? ? NH2 B ARG 709 ? ? 116.93 120.30 -3.37 0.50 N 115 1 CD1 B TRP 713 ? ? CG B TRP 713 ? ? CD2 B TRP 713 ? ? 112.27 106.30 5.97 0.80 N 116 1 CE2 B TRP 713 ? ? CD2 B TRP 713 ? ? CG B TRP 713 ? ? 101.85 107.30 -5.45 0.80 N 117 1 CB B TYR 721 ? ? CG B TYR 721 ? ? CD2 B TYR 721 ? ? 114.70 121.00 -6.30 0.60 N 118 1 N B GLU 737 ? ? CA B GLU 737 ? ? CB B GLU 737 ? ? 98.51 110.60 -12.09 1.80 N 119 1 NE B ARG 767 ? ? CZ B ARG 767 ? ? NH1 B ARG 767 ? ? 124.68 120.30 4.38 0.50 N 120 1 NE B ARG 767 ? ? CZ B ARG 767 ? ? NH2 B ARG 767 ? ? 116.11 120.30 -4.19 0.50 N 121 1 CA B LEU 783 ? ? CB B LEU 783 ? ? CG B LEU 783 ? ? 131.47 115.30 16.17 2.30 N 122 1 NE B ARG 807 ? ? CZ B ARG 807 ? ? NH1 B ARG 807 ? ? 123.39 120.30 3.09 0.50 N 123 1 CD1 B TRP 828 ? ? CG B TRP 828 ? ? CD2 B TRP 828 ? ? 111.68 106.30 5.38 0.80 N 124 1 CE2 B TRP 828 ? ? CD2 B TRP 828 ? ? CG B TRP 828 ? ? 101.54 107.30 -5.76 0.80 N 125 1 CB B TYR 843 ? ? CG B TYR 843 ? ? CD2 B TYR 843 ? ? 117.37 121.00 -3.63 0.60 N 126 1 NE B ARG 844 ? ? CZ B ARG 844 ? ? NH1 B ARG 844 ? ? 124.40 120.30 4.10 0.50 N 127 1 NE B ARG 844 ? ? CZ B ARG 844 ? ? NH2 B ARG 844 ? ? 114.90 120.30 -5.40 0.50 N 128 1 CD1 B TRP 855 ? ? CG B TRP 855 ? ? CD2 B TRP 855 ? ? 113.68 106.30 7.38 0.80 N 129 1 CE2 B TRP 855 ? ? CD2 B TRP 855 ? ? CG B TRP 855 ? ? 100.86 107.30 -6.44 0.80 N 130 1 CA B GLN 856 ? ? CB B GLN 856 ? ? CG B GLN 856 ? ? 127.48 113.40 14.08 2.20 N 131 1 NE B ARG 858 ? ? CZ B ARG 858 ? ? NH1 B ARG 858 ? ? 123.57 120.30 3.27 0.50 N 132 1 NE B ARG 865 ? ? CZ B ARG 865 ? ? NH2 B ARG 865 ? ? 115.30 120.30 -5.00 0.50 N 133 1 CA B MET 890 ? ? CB B MET 890 ? ? CG B MET 890 ? ? 100.49 113.30 -12.81 1.70 N 134 1 NE B ARG 901 ? ? CZ B ARG 901 ? ? NH2 B ARG 901 ? ? 116.03 120.30 -4.27 0.50 N 135 1 CG B ARG 903 ? ? CD B ARG 903 ? ? NE B ARG 903 ? ? 98.51 111.80 -13.29 2.10 N 136 1 NE B ARG 903 ? ? CZ B ARG 903 ? ? NH1 B ARG 903 ? ? 123.57 120.30 3.27 0.50 N 137 1 NE B ARG 903 ? ? CZ B ARG 903 ? ? NH2 B ARG 903 ? ? 113.07 120.30 -7.23 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 10 ? ? -142.75 48.56 2 1 ARG A 35 ? ? 178.28 -55.64 3 1 GLU A 115 ? ? -67.98 8.51 4 1 PRO A 126 ? ? -42.86 166.19 5 1 ALA A 252 ? ? -170.80 147.18 6 1 GLU A 258 ? ? 71.18 49.14 7 1 LYS A 264 ? ? -154.57 -152.90 8 1 PRO A 338 ? ? -27.32 -68.32 9 1 LEU A 353 ? ? 47.62 -123.64 10 1 CYS A 420 ? ? -137.79 -143.16 11 1 LYS B 560 ? ? 72.17 -37.59 12 1 PRO B 563 ? ? -62.27 81.62 13 1 GLU B 564 ? ? -179.78 -71.47 14 1 ALA B 726 ? ? -59.90 -9.23 15 1 SER B 761 ? ? -87.44 42.31 16 1 ASP B 765 ? ? 19.82 50.00 17 1 PRO B 838 ? ? -31.53 -72.67 18 1 LEU B 853 ? ? 46.76 -108.94 19 1 CYS B 920 ? ? -105.62 -131.81 # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A H2U 20 T H2U 20 A U "5,6-DIHYDROURIDINE-5'-MONOPHOSPHATE" 2 A 5MU 72 T 5MU 54 ? U ;5-METHYLURIDINE 5'-MONOPHOSPHATE ; 3 A PSU 73 T PSU 55 ? U "PSEUDOURIDINE-5'-MONOPHOSPHATE" # _pdbx_entry_details.entry_id 1SER _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE SEQUENCE OF T. THERMOPHILUS SERYL-TRNA SYNTHETASE IS REPORTED IN REFERENCE 2 (SEE ABOVE). ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 T G 1 ? A G 1 2 1 Y 1 T G 2 ? A G 2 3 1 Y 1 T A 3 ? A A 3 4 1 Y 1 T C 28 ? A C 28 5 1 Y 1 T A 29 ? A A 29 6 1 Y 1 T C 30 ? A C 30 7 1 Y 1 T G 31 ? A G 31 8 1 Y 1 T A 32 ? A A 32 9 1 Y 1 T C 33 ? A C 33 10 1 Y 1 T U 34 ? A U 34 11 1 Y 1 T G 35 ? A G 35 12 1 Y 1 T G 36 ? A G 36 13 1 Y 1 T A 37 ? A A 37 14 1 Y 1 T A 38 ? A A 38 15 1 Y 1 T A 39 ? A A 39 16 1 Y 1 T U 40 ? A U 40 17 1 Y 1 T C 41 ? A C 41 18 1 Y 1 T U 42 A A U 43 19 1 Y 1 T C 47 E A C 53 20 1 Y 1 T U 47 F A U 54 21 1 Y 1 T U 47 G A U 55 22 1 Y 1 T A 47 H A A 56 23 1 Y 1 T A 47 I A A 57 24 1 Y 1 T A 47 J A A 58 25 1 Y 1 T C 72 ? A C 90 26 1 Y 1 T G 73 ? A G 91 27 1 Y 1 T C 74 ? A C 92 28 1 Y 1 T C 75 ? A C 93 29 1 Y 1 T A 76 ? A A 94 30 1 Y 1 A GLU 39 ? B GLU 39 31 1 Y 1 A LEU 40 ? B LEU 40 32 1 Y 1 A LYS 41 ? B LYS 41 33 1 Y 1 A LYS 42 ? B LYS 42 34 1 Y 1 A ARG 43 ? B ARG 43 35 1 Y 1 A LEU 44 ? B LEU 44 36 1 Y 1 A GLN 45 ? B GLN 45 37 1 Y 1 A GLU 46 ? B GLU 46 38 1 Y 1 A VAL 47 ? B VAL 47 39 1 Y 1 A GLN 48 ? B GLN 48 40 1 Y 1 A THR 49 ? B THR 49 41 1 Y 1 A GLU 50 ? B GLU 50 42 1 Y 1 A ARG 51 ? B ARG 51 43 1 Y 1 A ASN 52 ? B ASN 52 44 1 Y 1 A GLN 53 ? B GLN 53 45 1 Y 1 A VAL 54 ? B VAL 54 46 1 Y 1 A ALA 55 ? B ALA 55 47 1 Y 1 A LYS 56 ? B LYS 56 48 1 Y 1 A ARG 57 ? B ARG 57 49 1 Y 1 A VAL 58 ? B VAL 58 50 1 Y 1 A PRO 59 ? B PRO 59 51 1 Y 1 A LYS 60 ? B LYS 60 52 1 Y 1 A ALA 61 ? B ALA 61 53 1 Y 1 A PRO 62 ? B PRO 62 54 1 Y 1 A PRO 63 ? B PRO 63 55 1 Y 1 A GLU 64 ? B GLU 64 56 1 Y 1 A GLU 65 ? B GLU 65 57 1 Y 1 A LYS 66 ? B LYS 66 58 1 Y 1 A GLU 67 ? B GLU 67 59 1 Y 1 A ALA 68 ? B ALA 68 60 1 Y 1 A LEU 69 ? B LEU 69 61 1 Y 1 A ILE 70 ? B ILE 70 62 1 Y 1 A ALA 71 ? B ALA 71 63 1 Y 1 A ARG 72 ? B ARG 72 64 1 Y 1 A GLY 73 ? B GLY 73 65 1 Y 1 A LYS 74 ? B LYS 74 66 1 Y 1 A ALA 75 ? B ALA 75 67 1 Y 1 A LEU 76 ? B LEU 76 68 1 Y 1 A GLY 77 ? B GLY 77 69 1 Y 1 A GLU 78 ? B GLU 78 70 1 Y 1 A GLU 79 ? B GLU 79 71 1 Y 1 A ALA 80 ? B ALA 80 72 1 Y 1 A LYS 81 ? B LYS 81 73 1 Y 1 A ARG 82 ? B ARG 82 74 1 Y 1 A LEU 83 ? B LEU 83 75 1 Y 1 A GLU 84 ? B GLU 84 76 1 Y 1 A GLU 85 ? B GLU 85 77 1 Y 1 A ALA 86 ? B ALA 86 78 1 Y 1 A LEU 87 ? B LEU 87 79 1 Y 0 A SER 261 ? B SER 261 80 1 Y 0 A PHE 262 ? B PHE 262 81 1 Y 0 A GLY 263 ? B GLY 263 82 1 Y 0 A LYS 264 ? B LYS 264 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 5MU N1 N N N 1 5MU C2 C N N 2 5MU N3 N N N 3 5MU C4 C N N 4 5MU C5 C N N 5 5MU C5M C N N 6 5MU C6 C N N 7 5MU O2 O N N 8 5MU O4 O N N 9 5MU "C1'" C N R 10 5MU "C2'" C N R 11 5MU "O2'" O N N 12 5MU "C3'" C N S 13 5MU "C4'" C N R 14 5MU "O3'" O N N 15 5MU "O4'" O N N 16 5MU "C5'" C N N 17 5MU "O5'" O N N 18 5MU P P N N 19 5MU OP1 O N N 20 5MU OP2 O N N 21 5MU OP3 O N N 22 5MU HN3 H N N 23 5MU H71 H N N 24 5MU H72 H N N 25 5MU H73 H N N 26 5MU H6 H N N 27 5MU "H1'" H N N 28 5MU "H2'" H N N 29 5MU "HO2'" H N N 30 5MU "H3'" H N N 31 5MU "H4'" H N N 32 5MU "HO3'" H N N 33 5MU "H5'" H N N 34 5MU "H5''" H N N 35 5MU HOP2 H N N 36 5MU HOP3 H N N 37 A OP3 O N N 38 A P P N N 39 A OP1 O N N 40 A OP2 O N N 41 A "O5'" O N N 42 A "C5'" C N N 43 A "C4'" C N R 44 A "O4'" O N N 45 A "C3'" C N S 46 A "O3'" O N N 47 A "C2'" C N R 48 A "O2'" O N N 49 A "C1'" C N R 50 A N9 N Y N 51 A C8 C Y N 52 A N7 N Y N 53 A C5 C Y N 54 A C6 C Y N 55 A N6 N N N 56 A N1 N Y N 57 A C2 C Y N 58 A N3 N Y N 59 A C4 C Y N 60 A HOP3 H N N 61 A HOP2 H N N 62 A "H5'" H N N 63 A "H5''" H N N 64 A "H4'" H N N 65 A "H3'" H N N 66 A "HO3'" H N N 67 A "H2'" H N N 68 A "HO2'" H N N 69 A "H1'" H N N 70 A H8 H N N 71 A H61 H N N 72 A H62 H N N 73 A H2 H N N 74 ALA N N N N 75 ALA CA C N S 76 ALA C C N N 77 ALA O O N N 78 ALA CB C N N 79 ALA OXT O N N 80 ALA H H N N 81 ALA H2 H N N 82 ALA HA H N N 83 ALA HB1 H N N 84 ALA HB2 H N N 85 ALA HB3 H N N 86 ALA HXT H N N 87 ARG N N N N 88 ARG CA C N S 89 ARG C C N N 90 ARG O O N N 91 ARG CB C N N 92 ARG CG C N N 93 ARG CD C N N 94 ARG NE N N N 95 ARG CZ C N N 96 ARG NH1 N N N 97 ARG NH2 N N N 98 ARG OXT O N N 99 ARG H H N N 100 ARG H2 H N N 101 ARG HA H N N 102 ARG HB2 H N N 103 ARG HB3 H N N 104 ARG HG2 H N N 105 ARG HG3 H N N 106 ARG HD2 H N N 107 ARG HD3 H N N 108 ARG HE H N N 109 ARG HH11 H N N 110 ARG HH12 H N N 111 ARG HH21 H N N 112 ARG HH22 H N N 113 ARG HXT H N N 114 ASN N N N N 115 ASN CA C N S 116 ASN C C N N 117 ASN O O N N 118 ASN CB C N N 119 ASN CG C N N 120 ASN OD1 O N N 121 ASN ND2 N N N 122 ASN OXT O N N 123 ASN H H N N 124 ASN H2 H N N 125 ASN HA H N N 126 ASN HB2 H N N 127 ASN HB3 H N N 128 ASN HD21 H N N 129 ASN HD22 H N N 130 ASN HXT H N N 131 ASP N N N N 132 ASP CA C N S 133 ASP C C N N 134 ASP O O N N 135 ASP CB C N N 136 ASP CG C N N 137 ASP OD1 O N N 138 ASP OD2 O N N 139 ASP OXT O N N 140 ASP H H N N 141 ASP H2 H N N 142 ASP HA H N N 143 ASP HB2 H N N 144 ASP HB3 H N N 145 ASP HD2 H N N 146 ASP HXT H N N 147 C OP3 O N N 148 C P P N N 149 C OP1 O N N 150 C OP2 O N N 151 C "O5'" O N N 152 C "C5'" C N N 153 C "C4'" C N R 154 C "O4'" O N N 155 C "C3'" C N S 156 C "O3'" O N N 157 C "C2'" C N R 158 C "O2'" O N N 159 C "C1'" C N R 160 C N1 N N N 161 C C2 C N N 162 C O2 O N N 163 C N3 N N N 164 C C4 C N N 165 C N4 N N N 166 C C5 C N N 167 C C6 C N N 168 C HOP3 H N N 169 C HOP2 H N N 170 C "H5'" H N N 171 C "H5''" H N N 172 C "H4'" H N N 173 C "H3'" H N N 174 C "HO3'" H N N 175 C "H2'" H N N 176 C "HO2'" H N N 177 C "H1'" H N N 178 C H41 H N N 179 C H42 H N N 180 C H5 H N N 181 C H6 H N N 182 CYS N N N N 183 CYS CA C N R 184 CYS C C N N 185 CYS O O N N 186 CYS CB C N N 187 CYS SG S N N 188 CYS OXT O N N 189 CYS H H N N 190 CYS H2 H N N 191 CYS HA H N N 192 CYS HB2 H N N 193 CYS HB3 H N N 194 CYS HG H N N 195 CYS HXT H N N 196 G OP3 O N N 197 G P P N N 198 G OP1 O N N 199 G OP2 O N N 200 G "O5'" O N N 201 G "C5'" C N N 202 G "C4'" C N R 203 G "O4'" O N N 204 G "C3'" C N S 205 G "O3'" O N N 206 G "C2'" C N R 207 G "O2'" O N N 208 G "C1'" C N R 209 G N9 N Y N 210 G C8 C Y N 211 G N7 N Y N 212 G C5 C Y N 213 G C6 C N N 214 G O6 O N N 215 G N1 N N N 216 G C2 C N N 217 G N2 N N N 218 G N3 N N N 219 G C4 C Y N 220 G HOP3 H N N 221 G HOP2 H N N 222 G "H5'" H N N 223 G "H5''" H N N 224 G "H4'" H N N 225 G "H3'" H N N 226 G "HO3'" H N N 227 G "H2'" H N N 228 G "HO2'" H N N 229 G "H1'" H N N 230 G H8 H N N 231 G H1 H N N 232 G H21 H N N 233 G H22 H N N 234 GLN N N N N 235 GLN CA C N S 236 GLN C C N N 237 GLN O O N N 238 GLN CB C N N 239 GLN CG C N N 240 GLN CD C N N 241 GLN OE1 O N N 242 GLN NE2 N N N 243 GLN OXT O N N 244 GLN H H N N 245 GLN H2 H N N 246 GLN HA H N N 247 GLN HB2 H N N 248 GLN HB3 H N N 249 GLN HG2 H N N 250 GLN HG3 H N N 251 GLN HE21 H N N 252 GLN HE22 H N N 253 GLN HXT H N N 254 GLU N N N N 255 GLU CA C N S 256 GLU C C N N 257 GLU O O N N 258 GLU CB C N N 259 GLU CG C N N 260 GLU CD C N N 261 GLU OE1 O N N 262 GLU OE2 O N N 263 GLU OXT O N N 264 GLU H H N N 265 GLU H2 H N N 266 GLU HA H N N 267 GLU HB2 H N N 268 GLU HB3 H N N 269 GLU HG2 H N N 270 GLU HG3 H N N 271 GLU HE2 H N N 272 GLU HXT H N N 273 GLY N N N N 274 GLY CA C N N 275 GLY C C N N 276 GLY O O N N 277 GLY OXT O N N 278 GLY H H N N 279 GLY H2 H N N 280 GLY HA2 H N N 281 GLY HA3 H N N 282 GLY HXT H N N 283 H2U P P N N 284 H2U OP1 O N N 285 H2U OP2 O N N 286 H2U OP3 O N N 287 H2U "O5'" O N N 288 H2U "C5'" C N N 289 H2U "C4'" C N R 290 H2U "O4'" O N N 291 H2U "C3'" C N S 292 H2U "O3'" O N N 293 H2U "C1'" C N R 294 H2U "C2'" C N R 295 H2U "O2'" O N N 296 H2U N1 N N N 297 H2U C2 C N N 298 H2U O2 O N N 299 H2U N3 N N N 300 H2U C4 C N N 301 H2U O4 O N N 302 H2U C5 C N N 303 H2U C6 C N N 304 H2U HOP2 H N N 305 H2U HOP3 H N N 306 H2U "H5'" H N N 307 H2U "H5''" H N N 308 H2U "H4'" H N N 309 H2U "H3'" H N N 310 H2U "HO3'" H N N 311 H2U "H1'" H N N 312 H2U "H2'" H N N 313 H2U "HO2'" H N N 314 H2U HN3 H N N 315 H2U H51 H N N 316 H2U H52 H N N 317 H2U H61 H N N 318 H2U H62 H N N 319 HIS N N N N 320 HIS CA C N S 321 HIS C C N N 322 HIS O O N N 323 HIS CB C N N 324 HIS CG C Y N 325 HIS ND1 N Y N 326 HIS CD2 C Y N 327 HIS CE1 C Y N 328 HIS NE2 N Y N 329 HIS OXT O N N 330 HIS H H N N 331 HIS H2 H N N 332 HIS HA H N N 333 HIS HB2 H N N 334 HIS HB3 H N N 335 HIS HD1 H N N 336 HIS HD2 H N N 337 HIS HE1 H N N 338 HIS HE2 H N N 339 HIS HXT H N N 340 HOH O O N N 341 HOH H1 H N N 342 HOH H2 H N N 343 ILE N N N N 344 ILE CA C N S 345 ILE C C N N 346 ILE O O N N 347 ILE CB C N S 348 ILE CG1 C N N 349 ILE CG2 C N N 350 ILE CD1 C N N 351 ILE OXT O N N 352 ILE H H N N 353 ILE H2 H N N 354 ILE HA H N N 355 ILE HB H N N 356 ILE HG12 H N N 357 ILE HG13 H N N 358 ILE HG21 H N N 359 ILE HG22 H N N 360 ILE HG23 H N N 361 ILE HD11 H N N 362 ILE HD12 H N N 363 ILE HD13 H N N 364 ILE HXT H N N 365 LEU N N N N 366 LEU CA C N S 367 LEU C C N N 368 LEU O O N N 369 LEU CB C N N 370 LEU CG C N N 371 LEU CD1 C N N 372 LEU CD2 C N N 373 LEU OXT O N N 374 LEU H H N N 375 LEU H2 H N N 376 LEU HA H N N 377 LEU HB2 H N N 378 LEU HB3 H N N 379 LEU HG H N N 380 LEU HD11 H N N 381 LEU HD12 H N N 382 LEU HD13 H N N 383 LEU HD21 H N N 384 LEU HD22 H N N 385 LEU HD23 H N N 386 LEU HXT H N N 387 LYS N N N N 388 LYS CA C N S 389 LYS C C N N 390 LYS O O N N 391 LYS CB C N N 392 LYS CG C N N 393 LYS CD C N N 394 LYS CE C N N 395 LYS NZ N N N 396 LYS OXT O N N 397 LYS H H N N 398 LYS H2 H N N 399 LYS HA H N N 400 LYS HB2 H N N 401 LYS HB3 H N N 402 LYS HG2 H N N 403 LYS HG3 H N N 404 LYS HD2 H N N 405 LYS HD3 H N N 406 LYS HE2 H N N 407 LYS HE3 H N N 408 LYS HZ1 H N N 409 LYS HZ2 H N N 410 LYS HZ3 H N N 411 LYS HXT H N N 412 MET N N N N 413 MET CA C N S 414 MET C C N N 415 MET O O N N 416 MET CB C N N 417 MET CG C N N 418 MET SD S N N 419 MET CE C N N 420 MET OXT O N N 421 MET H H N N 422 MET H2 H N N 423 MET HA H N N 424 MET HB2 H N N 425 MET HB3 H N N 426 MET HG2 H N N 427 MET HG3 H N N 428 MET HE1 H N N 429 MET HE2 H N N 430 MET HE3 H N N 431 MET HXT H N N 432 PHE N N N N 433 PHE CA C N S 434 PHE C C N N 435 PHE O O N N 436 PHE CB C N N 437 PHE CG C Y N 438 PHE CD1 C Y N 439 PHE CD2 C Y N 440 PHE CE1 C Y N 441 PHE CE2 C Y N 442 PHE CZ C Y N 443 PHE OXT O N N 444 PHE H H N N 445 PHE H2 H N N 446 PHE HA H N N 447 PHE HB2 H N N 448 PHE HB3 H N N 449 PHE HD1 H N N 450 PHE HD2 H N N 451 PHE HE1 H N N 452 PHE HE2 H N N 453 PHE HZ H N N 454 PHE HXT H N N 455 PRO N N N N 456 PRO CA C N S 457 PRO C C N N 458 PRO O O N N 459 PRO CB C N N 460 PRO CG C N N 461 PRO CD C N N 462 PRO OXT O N N 463 PRO H H N N 464 PRO HA H N N 465 PRO HB2 H N N 466 PRO HB3 H N N 467 PRO HG2 H N N 468 PRO HG3 H N N 469 PRO HD2 H N N 470 PRO HD3 H N N 471 PRO HXT H N N 472 PSU N1 N N N 473 PSU C2 C N N 474 PSU N3 N N N 475 PSU C4 C N N 476 PSU C5 C N N 477 PSU C6 C N N 478 PSU O2 O N N 479 PSU O4 O N N 480 PSU "C1'" C N S 481 PSU "C2'" C N R 482 PSU "O2'" O N N 483 PSU "C3'" C N S 484 PSU "C4'" C N R 485 PSU "O3'" O N N 486 PSU "O4'" O N N 487 PSU "C5'" C N N 488 PSU "O5'" O N N 489 PSU P P N N 490 PSU OP1 O N N 491 PSU OP2 O N N 492 PSU OP3 O N N 493 PSU HN1 H N N 494 PSU HN3 H N N 495 PSU H6 H N N 496 PSU "H1'" H N N 497 PSU "H2'" H N N 498 PSU "HO2'" H N N 499 PSU "H3'" H N N 500 PSU "H4'" H N N 501 PSU "HO3'" H N N 502 PSU "H5'" H N N 503 PSU "H5''" H N N 504 PSU HOP2 H N N 505 PSU HOP3 H N N 506 SER N N N N 507 SER CA C N S 508 SER C C N N 509 SER O O N N 510 SER CB C N N 511 SER OG O N N 512 SER OXT O N N 513 SER H H N N 514 SER H2 H N N 515 SER HA H N N 516 SER HB2 H N N 517 SER HB3 H N N 518 SER HG H N N 519 SER HXT H N N 520 THR N N N N 521 THR CA C N S 522 THR C C N N 523 THR O O N N 524 THR CB C N R 525 THR OG1 O N N 526 THR CG2 C N N 527 THR OXT O N N 528 THR H H N N 529 THR H2 H N N 530 THR HA H N N 531 THR HB H N N 532 THR HG1 H N N 533 THR HG21 H N N 534 THR HG22 H N N 535 THR HG23 H N N 536 THR HXT H N N 537 TRP N N N N 538 TRP CA C N S 539 TRP C C N N 540 TRP O O N N 541 TRP CB C N N 542 TRP CG C Y N 543 TRP CD1 C Y N 544 TRP CD2 C Y N 545 TRP NE1 N Y N 546 TRP CE2 C Y N 547 TRP CE3 C Y N 548 TRP CZ2 C Y N 549 TRP CZ3 C Y N 550 TRP CH2 C Y N 551 TRP OXT O N N 552 TRP H H N N 553 TRP H2 H N N 554 TRP HA H N N 555 TRP HB2 H N N 556 TRP HB3 H N N 557 TRP HD1 H N N 558 TRP HE1 H N N 559 TRP HE3 H N N 560 TRP HZ2 H N N 561 TRP HZ3 H N N 562 TRP HH2 H N N 563 TRP HXT H N N 564 TYR N N N N 565 TYR CA C N S 566 TYR C C N N 567 TYR O O N N 568 TYR CB C N N 569 TYR CG C Y N 570 TYR CD1 C Y N 571 TYR CD2 C Y N 572 TYR CE1 C Y N 573 TYR CE2 C Y N 574 TYR CZ C Y N 575 TYR OH O N N 576 TYR OXT O N N 577 TYR H H N N 578 TYR H2 H N N 579 TYR HA H N N 580 TYR HB2 H N N 581 TYR HB3 H N N 582 TYR HD1 H N N 583 TYR HD2 H N N 584 TYR HE1 H N N 585 TYR HE2 H N N 586 TYR HH H N N 587 TYR HXT H N N 588 U OP3 O N N 589 U P P N N 590 U OP1 O N N 591 U OP2 O N N 592 U "O5'" O N N 593 U "C5'" C N N 594 U "C4'" C N R 595 U "O4'" O N N 596 U "C3'" C N S 597 U "O3'" O N N 598 U "C2'" C N R 599 U "O2'" O N N 600 U "C1'" C N R 601 U N1 N N N 602 U C2 C N N 603 U O2 O N N 604 U N3 N N N 605 U C4 C N N 606 U O4 O N N 607 U C5 C N N 608 U C6 C N N 609 U HOP3 H N N 610 U HOP2 H N N 611 U "H5'" H N N 612 U "H5''" H N N 613 U "H4'" H N N 614 U "H3'" H N N 615 U "HO3'" H N N 616 U "H2'" H N N 617 U "HO2'" H N N 618 U "H1'" H N N 619 U H3 H N N 620 U H5 H N N 621 U H6 H N N 622 VAL N N N N 623 VAL CA C N S 624 VAL C C N N 625 VAL O O N N 626 VAL CB C N N 627 VAL CG1 C N N 628 VAL CG2 C N N 629 VAL OXT O N N 630 VAL H H N N 631 VAL H2 H N N 632 VAL HA H N N 633 VAL HB H N N 634 VAL HG11 H N N 635 VAL HG12 H N N 636 VAL HG13 H N N 637 VAL HG21 H N N 638 VAL HG22 H N N 639 VAL HG23 H N N 640 VAL HXT H N N 641 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5MU N1 C2 sing N N 1 5MU N1 C6 sing N N 2 5MU N1 "C1'" sing N N 3 5MU C2 N3 sing N N 4 5MU C2 O2 doub N N 5 5MU N3 C4 sing N N 6 5MU N3 HN3 sing N N 7 5MU C4 C5 sing N N 8 5MU C4 O4 doub N N 9 5MU C5 C5M sing N N 10 5MU C5 C6 doub N N 11 5MU C5M H71 sing N N 12 5MU C5M H72 sing N N 13 5MU C5M H73 sing N N 14 5MU C6 H6 sing N N 15 5MU "C1'" "C2'" sing N N 16 5MU "C1'" "O4'" sing N N 17 5MU "C1'" "H1'" sing N N 18 5MU "C2'" "O2'" sing N N 19 5MU "C2'" "C3'" sing N N 20 5MU "C2'" "H2'" sing N N 21 5MU "O2'" "HO2'" sing N N 22 5MU "C3'" "C4'" sing N N 23 5MU "C3'" "O3'" sing N N 24 5MU "C3'" "H3'" sing N N 25 5MU "C4'" "O4'" sing N N 26 5MU "C4'" "C5'" sing N N 27 5MU "C4'" "H4'" sing N N 28 5MU "O3'" "HO3'" sing N N 29 5MU "C5'" "O5'" sing N N 30 5MU "C5'" "H5'" sing N N 31 5MU "C5'" "H5''" sing N N 32 5MU "O5'" P sing N N 33 5MU P OP1 doub N N 34 5MU P OP2 sing N N 35 5MU P OP3 sing N N 36 5MU OP2 HOP2 sing N N 37 5MU OP3 HOP3 sing N N 38 A OP3 P sing N N 39 A OP3 HOP3 sing N N 40 A P OP1 doub N N 41 A P OP2 sing N N 42 A P "O5'" sing N N 43 A OP2 HOP2 sing N N 44 A "O5'" "C5'" sing N N 45 A "C5'" "C4'" sing N N 46 A "C5'" "H5'" sing N N 47 A "C5'" "H5''" sing N N 48 A "C4'" "O4'" sing N N 49 A "C4'" "C3'" sing N N 50 A "C4'" "H4'" sing N N 51 A "O4'" "C1'" sing N N 52 A "C3'" "O3'" sing N N 53 A "C3'" "C2'" sing N N 54 A "C3'" "H3'" sing N N 55 A "O3'" "HO3'" sing N N 56 A "C2'" "O2'" sing N N 57 A "C2'" "C1'" sing N N 58 A "C2'" "H2'" sing N N 59 A "O2'" "HO2'" sing N N 60 A "C1'" N9 sing N N 61 A "C1'" "H1'" sing N N 62 A N9 C8 sing Y N 63 A N9 C4 sing Y N 64 A C8 N7 doub Y N 65 A C8 H8 sing N N 66 A N7 C5 sing Y N 67 A C5 C6 sing Y N 68 A C5 C4 doub Y N 69 A C6 N6 sing N N 70 A C6 N1 doub Y N 71 A N6 H61 sing N N 72 A N6 H62 sing N N 73 A N1 C2 sing Y N 74 A C2 N3 doub Y N 75 A C2 H2 sing N N 76 A N3 C4 sing Y N 77 ALA N CA sing N N 78 ALA N H sing N N 79 ALA N H2 sing N N 80 ALA CA C sing N N 81 ALA CA CB sing N N 82 ALA CA HA sing N N 83 ALA C O doub N N 84 ALA C OXT sing N N 85 ALA CB HB1 sing N N 86 ALA CB HB2 sing N N 87 ALA CB HB3 sing N N 88 ALA OXT HXT sing N N 89 ARG N CA sing N N 90 ARG N H sing N N 91 ARG N H2 sing N N 92 ARG CA C sing N N 93 ARG CA CB sing N N 94 ARG CA HA sing N N 95 ARG C O doub N N 96 ARG C OXT sing N N 97 ARG CB CG sing N N 98 ARG CB HB2 sing N N 99 ARG CB HB3 sing N N 100 ARG CG CD sing N N 101 ARG CG HG2 sing N N 102 ARG CG HG3 sing N N 103 ARG CD NE sing N N 104 ARG CD HD2 sing N N 105 ARG CD HD3 sing N N 106 ARG NE CZ sing N N 107 ARG NE HE sing N N 108 ARG CZ NH1 sing N N 109 ARG CZ NH2 doub N N 110 ARG NH1 HH11 sing N N 111 ARG NH1 HH12 sing N N 112 ARG NH2 HH21 sing N N 113 ARG NH2 HH22 sing N N 114 ARG OXT HXT sing N N 115 ASN N CA sing N N 116 ASN N H sing N N 117 ASN N H2 sing N N 118 ASN CA C sing N N 119 ASN CA CB sing N N 120 ASN CA HA sing N N 121 ASN C O doub N N 122 ASN C OXT sing N N 123 ASN CB CG sing N N 124 ASN CB HB2 sing N N 125 ASN CB HB3 sing N N 126 ASN CG OD1 doub N N 127 ASN CG ND2 sing N N 128 ASN ND2 HD21 sing N N 129 ASN ND2 HD22 sing N N 130 ASN OXT HXT sing N N 131 ASP N CA sing N N 132 ASP N H sing N N 133 ASP N H2 sing N N 134 ASP CA C sing N N 135 ASP CA CB sing N N 136 ASP CA HA sing N N 137 ASP C O doub N N 138 ASP C OXT sing N N 139 ASP CB CG sing N N 140 ASP CB HB2 sing N N 141 ASP CB HB3 sing N N 142 ASP CG OD1 doub N N 143 ASP CG OD2 sing N N 144 ASP OD2 HD2 sing N N 145 ASP OXT HXT sing N N 146 C OP3 P sing N N 147 C OP3 HOP3 sing N N 148 C P OP1 doub N N 149 C P OP2 sing N N 150 C P "O5'" sing N N 151 C OP2 HOP2 sing N N 152 C "O5'" "C5'" sing N N 153 C "C5'" "C4'" sing N N 154 C "C5'" "H5'" sing N N 155 C "C5'" "H5''" sing N N 156 C "C4'" "O4'" sing N N 157 C "C4'" "C3'" sing N N 158 C "C4'" "H4'" sing N N 159 C "O4'" "C1'" sing N N 160 C "C3'" "O3'" sing N N 161 C "C3'" "C2'" sing N N 162 C "C3'" "H3'" sing N N 163 C "O3'" "HO3'" sing N N 164 C "C2'" "O2'" sing N N 165 C "C2'" "C1'" sing N N 166 C "C2'" "H2'" sing N N 167 C "O2'" "HO2'" sing N N 168 C "C1'" N1 sing N N 169 C "C1'" "H1'" sing N N 170 C N1 C2 sing N N 171 C N1 C6 sing N N 172 C C2 O2 doub N N 173 C C2 N3 sing N N 174 C N3 C4 doub N N 175 C C4 N4 sing N N 176 C C4 C5 sing N N 177 C N4 H41 sing N N 178 C N4 H42 sing N N 179 C C5 C6 doub N N 180 C C5 H5 sing N N 181 C C6 H6 sing N N 182 CYS N CA sing N N 183 CYS N H sing N N 184 CYS N H2 sing N N 185 CYS CA C sing N N 186 CYS CA CB sing N N 187 CYS CA HA sing N N 188 CYS C O doub N N 189 CYS C OXT sing N N 190 CYS CB SG sing N N 191 CYS CB HB2 sing N N 192 CYS CB HB3 sing N N 193 CYS SG HG sing N N 194 CYS OXT HXT sing N N 195 G OP3 P sing N N 196 G OP3 HOP3 sing N N 197 G P OP1 doub N N 198 G P OP2 sing N N 199 G P "O5'" sing N N 200 G OP2 HOP2 sing N N 201 G "O5'" "C5'" sing N N 202 G "C5'" "C4'" sing N N 203 G "C5'" "H5'" sing N N 204 G "C5'" "H5''" sing N N 205 G "C4'" "O4'" sing N N 206 G "C4'" "C3'" sing N N 207 G "C4'" "H4'" sing N N 208 G "O4'" "C1'" sing N N 209 G "C3'" "O3'" sing N N 210 G "C3'" "C2'" sing N N 211 G "C3'" "H3'" sing N N 212 G "O3'" "HO3'" sing N N 213 G "C2'" "O2'" sing N N 214 G "C2'" "C1'" sing N N 215 G "C2'" "H2'" sing N N 216 G "O2'" "HO2'" sing N N 217 G "C1'" N9 sing N N 218 G "C1'" "H1'" sing N N 219 G N9 C8 sing Y N 220 G N9 C4 sing Y N 221 G C8 N7 doub Y N 222 G C8 H8 sing N N 223 G N7 C5 sing Y N 224 G C5 C6 sing N N 225 G C5 C4 doub Y N 226 G C6 O6 doub N N 227 G C6 N1 sing N N 228 G N1 C2 sing N N 229 G N1 H1 sing N N 230 G C2 N2 sing N N 231 G C2 N3 doub N N 232 G N2 H21 sing N N 233 G N2 H22 sing N N 234 G N3 C4 sing N N 235 GLN N CA sing N N 236 GLN N H sing N N 237 GLN N H2 sing N N 238 GLN CA C sing N N 239 GLN CA CB sing N N 240 GLN CA HA sing N N 241 GLN C O doub N N 242 GLN C OXT sing N N 243 GLN CB CG sing N N 244 GLN CB HB2 sing N N 245 GLN CB HB3 sing N N 246 GLN CG CD sing N N 247 GLN CG HG2 sing N N 248 GLN CG HG3 sing N N 249 GLN CD OE1 doub N N 250 GLN CD NE2 sing N N 251 GLN NE2 HE21 sing N N 252 GLN NE2 HE22 sing N N 253 GLN OXT HXT sing N N 254 GLU N CA sing N N 255 GLU N H sing N N 256 GLU N H2 sing N N 257 GLU CA C sing N N 258 GLU CA CB sing N N 259 GLU CA HA sing N N 260 GLU C O doub N N 261 GLU C OXT sing N N 262 GLU CB CG sing N N 263 GLU CB HB2 sing N N 264 GLU CB HB3 sing N N 265 GLU CG CD sing N N 266 GLU CG HG2 sing N N 267 GLU CG HG3 sing N N 268 GLU CD OE1 doub N N 269 GLU CD OE2 sing N N 270 GLU OE2 HE2 sing N N 271 GLU OXT HXT sing N N 272 GLY N CA sing N N 273 GLY N H sing N N 274 GLY N H2 sing N N 275 GLY CA C sing N N 276 GLY CA HA2 sing N N 277 GLY CA HA3 sing N N 278 GLY C O doub N N 279 GLY C OXT sing N N 280 GLY OXT HXT sing N N 281 H2U P OP1 doub N N 282 H2U P OP2 sing N N 283 H2U P OP3 sing N N 284 H2U P "O5'" sing N N 285 H2U OP2 HOP2 sing N N 286 H2U OP3 HOP3 sing N N 287 H2U "O5'" "C5'" sing N N 288 H2U "C5'" "C4'" sing N N 289 H2U "C5'" "H5'" sing N N 290 H2U "C5'" "H5''" sing N N 291 H2U "C4'" "O4'" sing N N 292 H2U "C4'" "C3'" sing N N 293 H2U "C4'" "H4'" sing N N 294 H2U "O4'" "C1'" sing N N 295 H2U "C3'" "O3'" sing N N 296 H2U "C3'" "C2'" sing N N 297 H2U "C3'" "H3'" sing N N 298 H2U "O3'" "HO3'" sing N N 299 H2U "C1'" "C2'" sing N N 300 H2U "C1'" N1 sing N N 301 H2U "C1'" "H1'" sing N N 302 H2U "C2'" "O2'" sing N N 303 H2U "C2'" "H2'" sing N N 304 H2U "O2'" "HO2'" sing N N 305 H2U N1 C2 sing N N 306 H2U N1 C6 sing N N 307 H2U C2 O2 doub N N 308 H2U C2 N3 sing N N 309 H2U N3 C4 sing N N 310 H2U N3 HN3 sing N N 311 H2U C4 O4 doub N N 312 H2U C4 C5 sing N N 313 H2U C5 C6 sing N N 314 H2U C5 H51 sing N N 315 H2U C5 H52 sing N N 316 H2U C6 H61 sing N N 317 H2U C6 H62 sing N N 318 HIS N CA sing N N 319 HIS N H sing N N 320 HIS N H2 sing N N 321 HIS CA C sing N N 322 HIS CA CB sing N N 323 HIS CA HA sing N N 324 HIS C O doub N N 325 HIS C OXT sing N N 326 HIS CB CG sing N N 327 HIS CB HB2 sing N N 328 HIS CB HB3 sing N N 329 HIS CG ND1 sing Y N 330 HIS CG CD2 doub Y N 331 HIS ND1 CE1 doub Y N 332 HIS ND1 HD1 sing N N 333 HIS CD2 NE2 sing Y N 334 HIS CD2 HD2 sing N N 335 HIS CE1 NE2 sing Y N 336 HIS CE1 HE1 sing N N 337 HIS NE2 HE2 sing N N 338 HIS OXT HXT sing N N 339 HOH O H1 sing N N 340 HOH O H2 sing N N 341 ILE N CA sing N N 342 ILE N H sing N N 343 ILE N H2 sing N N 344 ILE CA C sing N N 345 ILE CA CB sing N N 346 ILE CA HA sing N N 347 ILE C O doub N N 348 ILE C OXT sing N N 349 ILE CB CG1 sing N N 350 ILE CB CG2 sing N N 351 ILE CB HB sing N N 352 ILE CG1 CD1 sing N N 353 ILE CG1 HG12 sing N N 354 ILE CG1 HG13 sing N N 355 ILE CG2 HG21 sing N N 356 ILE CG2 HG22 sing N N 357 ILE CG2 HG23 sing N N 358 ILE CD1 HD11 sing N N 359 ILE CD1 HD12 sing N N 360 ILE CD1 HD13 sing N N 361 ILE OXT HXT sing N N 362 LEU N CA sing N N 363 LEU N H sing N N 364 LEU N H2 sing N N 365 LEU CA C sing N N 366 LEU CA CB sing N N 367 LEU CA HA sing N N 368 LEU C O doub N N 369 LEU C OXT sing N N 370 LEU CB CG sing N N 371 LEU CB HB2 sing N N 372 LEU CB HB3 sing N N 373 LEU CG CD1 sing N N 374 LEU CG CD2 sing N N 375 LEU CG HG sing N N 376 LEU CD1 HD11 sing N N 377 LEU CD1 HD12 sing N N 378 LEU CD1 HD13 sing N N 379 LEU CD2 HD21 sing N N 380 LEU CD2 HD22 sing N N 381 LEU CD2 HD23 sing N N 382 LEU OXT HXT sing N N 383 LYS N CA sing N N 384 LYS N H sing N N 385 LYS N H2 sing N N 386 LYS CA C sing N N 387 LYS CA CB sing N N 388 LYS CA HA sing N N 389 LYS C O doub N N 390 LYS C OXT sing N N 391 LYS CB CG sing N N 392 LYS CB HB2 sing N N 393 LYS CB HB3 sing N N 394 LYS CG CD sing N N 395 LYS CG HG2 sing N N 396 LYS CG HG3 sing N N 397 LYS CD CE sing N N 398 LYS CD HD2 sing N N 399 LYS CD HD3 sing N N 400 LYS CE NZ sing N N 401 LYS CE HE2 sing N N 402 LYS CE HE3 sing N N 403 LYS NZ HZ1 sing N N 404 LYS NZ HZ2 sing N N 405 LYS NZ HZ3 sing N N 406 LYS OXT HXT sing N N 407 MET N CA sing N N 408 MET N H sing N N 409 MET N H2 sing N N 410 MET CA C sing N N 411 MET CA CB sing N N 412 MET CA HA sing N N 413 MET C O doub N N 414 MET C OXT sing N N 415 MET CB CG sing N N 416 MET CB HB2 sing N N 417 MET CB HB3 sing N N 418 MET CG SD sing N N 419 MET CG HG2 sing N N 420 MET CG HG3 sing N N 421 MET SD CE sing N N 422 MET CE HE1 sing N N 423 MET CE HE2 sing N N 424 MET CE HE3 sing N N 425 MET OXT HXT sing N N 426 PHE N CA sing N N 427 PHE N H sing N N 428 PHE N H2 sing N N 429 PHE CA C sing N N 430 PHE CA CB sing N N 431 PHE CA HA sing N N 432 PHE C O doub N N 433 PHE C OXT sing N N 434 PHE CB CG sing N N 435 PHE CB HB2 sing N N 436 PHE CB HB3 sing N N 437 PHE CG CD1 doub Y N 438 PHE CG CD2 sing Y N 439 PHE CD1 CE1 sing Y N 440 PHE CD1 HD1 sing N N 441 PHE CD2 CE2 doub Y N 442 PHE CD2 HD2 sing N N 443 PHE CE1 CZ doub Y N 444 PHE CE1 HE1 sing N N 445 PHE CE2 CZ sing Y N 446 PHE CE2 HE2 sing N N 447 PHE CZ HZ sing N N 448 PHE OXT HXT sing N N 449 PRO N CA sing N N 450 PRO N CD sing N N 451 PRO N H sing N N 452 PRO CA C sing N N 453 PRO CA CB sing N N 454 PRO CA HA sing N N 455 PRO C O doub N N 456 PRO C OXT sing N N 457 PRO CB CG sing N N 458 PRO CB HB2 sing N N 459 PRO CB HB3 sing N N 460 PRO CG CD sing N N 461 PRO CG HG2 sing N N 462 PRO CG HG3 sing N N 463 PRO CD HD2 sing N N 464 PRO CD HD3 sing N N 465 PRO OXT HXT sing N N 466 PSU N1 C2 sing N N 467 PSU N1 C6 sing N N 468 PSU N1 HN1 sing N N 469 PSU C2 N3 sing N N 470 PSU C2 O2 doub N N 471 PSU N3 C4 sing N N 472 PSU N3 HN3 sing N N 473 PSU C4 C5 sing N N 474 PSU C4 O4 doub N N 475 PSU C5 C6 doub N N 476 PSU C5 "C1'" sing N N 477 PSU C6 H6 sing N N 478 PSU "C1'" "C2'" sing N N 479 PSU "C1'" "O4'" sing N N 480 PSU "C1'" "H1'" sing N N 481 PSU "C2'" "O2'" sing N N 482 PSU "C2'" "C3'" sing N N 483 PSU "C2'" "H2'" sing N N 484 PSU "O2'" "HO2'" sing N N 485 PSU "C3'" "C4'" sing N N 486 PSU "C3'" "O3'" sing N N 487 PSU "C3'" "H3'" sing N N 488 PSU "C4'" "O4'" sing N N 489 PSU "C4'" "C5'" sing N N 490 PSU "C4'" "H4'" sing N N 491 PSU "O3'" "HO3'" sing N N 492 PSU "C5'" "O5'" sing N N 493 PSU "C5'" "H5'" sing N N 494 PSU "C5'" "H5''" sing N N 495 PSU "O5'" P sing N N 496 PSU P OP1 doub N N 497 PSU P OP2 sing N N 498 PSU P OP3 sing N N 499 PSU OP2 HOP2 sing N N 500 PSU OP3 HOP3 sing N N 501 SER N CA sing N N 502 SER N H sing N N 503 SER N H2 sing N N 504 SER CA C sing N N 505 SER CA CB sing N N 506 SER CA HA sing N N 507 SER C O doub N N 508 SER C OXT sing N N 509 SER CB OG sing N N 510 SER CB HB2 sing N N 511 SER CB HB3 sing N N 512 SER OG HG sing N N 513 SER OXT HXT sing N N 514 THR N CA sing N N 515 THR N H sing N N 516 THR N H2 sing N N 517 THR CA C sing N N 518 THR CA CB sing N N 519 THR CA HA sing N N 520 THR C O doub N N 521 THR C OXT sing N N 522 THR CB OG1 sing N N 523 THR CB CG2 sing N N 524 THR CB HB sing N N 525 THR OG1 HG1 sing N N 526 THR CG2 HG21 sing N N 527 THR CG2 HG22 sing N N 528 THR CG2 HG23 sing N N 529 THR OXT HXT sing N N 530 TRP N CA sing N N 531 TRP N H sing N N 532 TRP N H2 sing N N 533 TRP CA C sing N N 534 TRP CA CB sing N N 535 TRP CA HA sing N N 536 TRP C O doub N N 537 TRP C OXT sing N N 538 TRP CB CG sing N N 539 TRP CB HB2 sing N N 540 TRP CB HB3 sing N N 541 TRP CG CD1 doub Y N 542 TRP CG CD2 sing Y N 543 TRP CD1 NE1 sing Y N 544 TRP CD1 HD1 sing N N 545 TRP CD2 CE2 doub Y N 546 TRP CD2 CE3 sing Y N 547 TRP NE1 CE2 sing Y N 548 TRP NE1 HE1 sing N N 549 TRP CE2 CZ2 sing Y N 550 TRP CE3 CZ3 doub Y N 551 TRP CE3 HE3 sing N N 552 TRP CZ2 CH2 doub Y N 553 TRP CZ2 HZ2 sing N N 554 TRP CZ3 CH2 sing Y N 555 TRP CZ3 HZ3 sing N N 556 TRP CH2 HH2 sing N N 557 TRP OXT HXT sing N N 558 TYR N CA sing N N 559 TYR N H sing N N 560 TYR N H2 sing N N 561 TYR CA C sing N N 562 TYR CA CB sing N N 563 TYR CA HA sing N N 564 TYR C O doub N N 565 TYR C OXT sing N N 566 TYR CB CG sing N N 567 TYR CB HB2 sing N N 568 TYR CB HB3 sing N N 569 TYR CG CD1 doub Y N 570 TYR CG CD2 sing Y N 571 TYR CD1 CE1 sing Y N 572 TYR CD1 HD1 sing N N 573 TYR CD2 CE2 doub Y N 574 TYR CD2 HD2 sing N N 575 TYR CE1 CZ doub Y N 576 TYR CE1 HE1 sing N N 577 TYR CE2 CZ sing Y N 578 TYR CE2 HE2 sing N N 579 TYR CZ OH sing N N 580 TYR OH HH sing N N 581 TYR OXT HXT sing N N 582 U OP3 P sing N N 583 U OP3 HOP3 sing N N 584 U P OP1 doub N N 585 U P OP2 sing N N 586 U P "O5'" sing N N 587 U OP2 HOP2 sing N N 588 U "O5'" "C5'" sing N N 589 U "C5'" "C4'" sing N N 590 U "C5'" "H5'" sing N N 591 U "C5'" "H5''" sing N N 592 U "C4'" "O4'" sing N N 593 U "C4'" "C3'" sing N N 594 U "C4'" "H4'" sing N N 595 U "O4'" "C1'" sing N N 596 U "C3'" "O3'" sing N N 597 U "C3'" "C2'" sing N N 598 U "C3'" "H3'" sing N N 599 U "O3'" "HO3'" sing N N 600 U "C2'" "O2'" sing N N 601 U "C2'" "C1'" sing N N 602 U "C2'" "H2'" sing N N 603 U "O2'" "HO2'" sing N N 604 U "C1'" N1 sing N N 605 U "C1'" "H1'" sing N N 606 U N1 C2 sing N N 607 U N1 C6 sing N N 608 U C2 O2 doub N N 609 U C2 N3 sing N N 610 U N3 C4 sing N N 611 U N3 H3 sing N N 612 U C4 O4 doub N N 613 U C4 C5 sing N N 614 U C5 C6 doub N N 615 U C5 H5 sing N N 616 U C6 H6 sing N N 617 VAL N CA sing N N 618 VAL N H sing N N 619 VAL N H2 sing N N 620 VAL CA C sing N N 621 VAL CA CB sing N N 622 VAL CA HA sing N N 623 VAL C O doub N N 624 VAL C OXT sing N N 625 VAL CB CG1 sing N N 626 VAL CB CG2 sing N N 627 VAL CB HB sing N N 628 VAL CG1 HG11 sing N N 629 VAL CG1 HG12 sing N N 630 VAL CG1 HG13 sing N N 631 VAL CG2 HG21 sing N N 632 VAL CG2 HG22 sing N N 633 VAL CG2 HG23 sing N N 634 VAL OXT HXT sing N N 635 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1SER 'double helix' 1SER 'a-form double helix' 1SER 'parallel strands' 1SER 'hairpin loop' 1SER 'bulge loop' 1SER 'mismatched base pair' 1SER 'triple helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 4 1_555 A C 87 1_555 -0.442 -0.309 0.105 5.074 -9.581 0.733 1 T_G4:C69_T T 4 ? T 69 ? 19 1 1 A A 5 1_555 A U 86 1_555 0.177 -0.223 -0.503 -7.840 -14.189 1.052 2 T_A5:U68_T T 5 ? T 68 ? 20 1 1 A G 6 1_555 A C 85 1_555 -0.410 -0.285 -0.125 -10.582 -16.275 -5.420 3 T_G6:C67_T T 6 ? T 67 ? 19 1 1 A G 7 1_555 A C 84 1_555 -0.589 -0.438 -0.012 1.946 -9.826 -4.945 4 T_G7:C66_T T 7 ? T 66 ? 19 1 1 A G 67 1_555 A C 83 1_555 -0.663 -0.372 -0.122 -8.465 -9.952 -0.828 5 T_G49:C65_T T 49 ? T 65 ? 19 1 1 A C 68 1_555 A G 82 1_555 0.277 -0.483 -0.070 -7.347 -13.046 -2.826 6 T_C50:G64_T T 50 ? T 64 ? 19 1 1 A G 69 1_555 A C 81 1_555 -0.294 -0.404 0.088 -1.681 -5.692 -1.462 7 T_G51:C63_T T 51 ? T 63 ? 19 1 1 A G 70 1_555 A C 80 1_555 -0.570 -0.363 0.096 -0.169 -6.023 -1.088 8 T_G52:C62_T T 52 ? T 62 ? 19 1 1 A G 71 1_555 A C 79 1_555 -0.651 -0.378 0.143 -13.382 -4.012 0.441 9 T_G53:C61_T T 53 ? T 61 ? 19 1 1 A 5MU 72 1_555 A A 76 1_555 3.635 -1.345 0.698 -0.976 12.495 -101.019 10 T_5MU54:A58_T T 54 ? T 58 ? 24 4 1 A PSU 73 1_555 A G 17 1_555 1.035 -4.912 0.492 13.084 7.812 -95.976 11 T_PSU55:G18_T T 55 ? T 18 ? ? 2 1 A C 10 1_555 A G 26 1_555 0.772 0.309 0.165 -7.593 -8.803 2.709 12 T_C10:G25_T T 10 ? T 25 ? ? 1 1 A C 11 1_555 A G 25 1_555 1.480 -0.009 -0.270 6.562 -10.941 9.174 13 T_C11:G24_T T 11 ? T 24 ? ? 1 1 A C 12 1_555 A G 24 1_555 -0.155 -0.018 0.440 -3.408 -11.333 -2.408 14 T_C12:G23_T T 12 ? T 23 ? 19 1 1 A G 13 1_555 A G 9 1_555 4.934 0.008 0.168 -34.490 19.203 -109.382 15 T_G13:G9_T T 13 ? T 9 ? 7 ? 1 A A 14 1_555 A U 8 1_555 -4.191 -2.292 0.457 6.697 18.104 -93.076 16 T_A14:U8_T T 14 ? T 8 ? 24 4 1 A G 15 1_555 A C 66 1_555 0.083 3.640 0.170 -9.734 6.733 159.684 17 T_G15:C48_T T 15 ? T 48 ? 22 2 1 A G 18 1_555 A C 74 1_555 0.263 -0.451 -0.245 17.897 -17.428 3.282 18 T_G19:C56_T T 19 ? T 56 ? 19 1 1 A A 46 1_555 A U 65 1_555 0.407 -0.323 -0.679 -14.922 1.983 -2.166 19 T_A45:U47Q_T T 45 ? T 47 Q 20 1 1 A G 47 1_555 A C 64 1_555 0.003 -0.256 -0.080 0.257 -2.409 -2.878 20 T_G46:C47P_T T 46 ? T 47 P 19 1 1 A G 48 1_555 A C 63 1_555 0.404 0.033 -0.093 2.536 -3.452 -5.359 21 T_G47:C47O_T T 47 ? T 47 O 19 1 1 A G 49 1_555 A C 62 1_555 -0.172 -0.255 -0.531 -11.296 -17.236 0.781 22 T_G47A:C47N_T T 47 A T 47 N 19 1 1 A G 50 1_555 A U 61 1_555 -2.635 -0.484 0.440 -2.694 -11.123 4.851 23 T_G47B:U47M_T T 47 B T 47 M 28 ? 1 A G 51 1_555 A C 60 1_555 -0.508 -0.282 -0.325 -10.030 -13.957 -7.578 24 T_G47C:C47L_T T 47 C T 47 L 19 1 1 A G 52 1_555 A C 59 1_555 -0.264 -0.070 1.026 4.538 -0.609 7.927 25 T_G47D:C47K_T T 47 D T 47 K 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 4 1_555 A C 87 1_555 A A 5 1_555 A U 86 1_555 -0.294 -1.733 3.689 1.738 10.874 37.575 -3.970 0.659 3.073 16.454 -2.630 39.099 1 TT_G4A5:U68C69_TT T 4 ? T 69 ? T 5 ? T 68 ? 1 A A 5 1_555 A U 86 1_555 A G 6 1_555 A C 85 1_555 0.366 -2.008 3.543 -1.807 8.729 23.415 -7.151 -1.366 2.601 20.577 4.259 25.032 2 TT_A5G6:C67U68_TT T 5 ? T 68 ? T 6 ? T 67 ? 1 A G 6 1_555 A C 85 1_555 A G 7 1_555 A C 84 1_555 0.028 -1.339 3.017 0.149 7.780 32.284 -3.488 -0.027 2.632 13.743 -0.264 33.184 3 TT_G6G7:C66C67_TT T 6 ? T 67 ? T 7 ? T 66 ? 1 A G 7 1_555 A C 84 1_555 A G 67 1_555 A C 83 1_555 0.049 -1.787 3.494 -1.654 14.216 35.918 -4.412 -0.273 2.623 22.006 2.561 38.577 4 TT_G7G49:C65C66_TT T 7 ? T 66 ? T 49 ? T 65 ? 1 A G 67 1_555 A C 83 1_555 A C 68 1_555 A G 82 1_555 -0.680 -1.498 3.319 -0.390 -1.087 41.163 -2.010 0.924 3.362 -1.546 0.555 41.179 5 TT_G49C50:G64C65_TT T 49 ? T 65 ? T 50 ? T 64 ? 1 A C 68 1_555 A G 82 1_555 A G 69 1_555 A C 81 1_555 0.420 -1.861 3.098 0.897 10.516 23.945 -6.500 -0.725 2.119 23.914 -2.039 26.136 6 TT_C50G51:C63G64_TT T 50 ? T 64 ? T 51 ? T 63 ? 1 A G 69 1_555 A C 81 1_555 A G 70 1_555 A C 80 1_555 0.899 -1.832 3.220 1.966 2.468 28.124 -4.302 -1.397 3.105 5.059 -4.031 28.297 7 TT_G51G52:C62C63_TT T 51 ? T 63 ? T 52 ? T 62 ? 1 A G 70 1_555 A C 80 1_555 A G 71 1_555 A C 79 1_555 1.174 -2.343 3.530 4.596 5.694 32.489 -5.082 -1.249 3.216 10.019 -8.087 33.282 8 TT_G52G53:C61C62_TT T 52 ? T 62 ? T 53 ? T 61 ? 1 A G 71 1_555 A C 79 1_555 A 5MU 72 1_555 A A 76 1_555 -2.603 -2.278 3.109 1.763 -3.485 88.825 -1.557 1.894 3.137 -2.489 -1.259 88.892 9 TT_G535MU54:A58C61_TT T 53 ? T 61 ? T 54 ? T 58 ? 1 A 5MU 72 1_555 A A 76 1_555 A PSU 73 1_555 A G 17 1_555 1.971 -2.163 3.386 10.377 2.187 40.519 -3.281 -1.572 3.645 3.094 -14.681 41.827 10 TT_5MU54PSU55:G18A58_TT T 54 ? T 58 ? T 55 ? T 18 ? 1 A C 10 1_555 A G 26 1_555 A C 11 1_555 A G 25 1_555 0.522 -0.907 3.326 3.614 -6.505 33.317 -0.460 -0.286 3.472 -11.172 -6.207 34.115 11 TT_C10C11:G24G25_TT T 10 ? T 25 ? T 11 ? T 24 ? 1 A C 11 1_555 A G 25 1_555 A C 12 1_555 A G 24 1_555 0.032 -1.788 3.586 -0.386 24.339 27.122 -5.950 -0.100 1.523 42.603 0.675 36.291 12 TT_C11C12:G23G24_TT T 11 ? T 24 ? T 12 ? T 23 ? 1 A C 12 1_555 A G 24 1_555 A G 13 1_555 A G 9 1_555 2.206 -4.240 3.533 23.997 9.844 119.813 -2.530 -1.021 3.559 5.657 -13.790 121.500 13 TT_C12G13:G9G23_TT T 12 ? T 23 ? T 13 ? T 9 ? 1 A G 13 1_555 A G 9 1_555 A A 14 1_555 A U 8 1_555 0.591 3.194 2.855 -15.902 4.138 -8.144 -11.946 -5.518 1.065 -16.070 -61.756 -18.327 14 TT_G13A14:U8G9_TT T 13 ? T 9 ? T 14 ? T 8 ? 1 A A 14 1_555 A U 8 1_555 A G 15 1_555 A C 66 1_555 1.879 -3.024 3.342 3.300 8.290 -74.302 2.221 1.655 3.541 -6.840 2.723 -74.759 15 TT_A14G15:C48U8_TT T 14 ? T 8 ? T 15 ? T 48 ? 1 A A 46 1_555 A U 65 1_555 A G 47 1_555 A C 64 1_555 -0.423 -1.412 3.089 -4.068 -2.089 25.233 -2.607 -0.165 3.220 -4.732 9.216 25.637 16 TT_A45G46:C47PU47Q_TT T 45 ? T 47 Q T 46 ? T 47 P 1 A G 47 1_555 A C 64 1_555 A G 48 1_555 A C 63 1_555 0.416 -1.886 3.246 0.738 7.564 31.062 -4.697 -0.631 2.731 13.866 -1.352 31.956 17 TT_G46G47:C47OC47P_TT T 46 ? T 47 P T 47 ? T 47 O 1 A G 48 1_555 A C 63 1_555 A G 49 1_555 A C 62 1_555 0.516 -2.090 3.668 5.724 14.383 29.479 -6.060 0.054 2.468 26.119 -10.395 33.216 18 TT_G47G47A:C47NC47O_TT T 47 ? T 47 O T 47 A T 47 N 1 A G 49 1_555 A C 62 1_555 A G 50 1_555 A U 61 1_555 0.392 -2.131 2.758 -9.024 7.160 21.734 -6.605 -2.933 1.688 17.494 22.049 24.566 19 TT_G47AG47B:U47MC47N_TT T 47 A T 47 N T 47 B T 47 M 1 A G 50 1_555 A U 61 1_555 A G 51 1_555 A C 60 1_555 -0.623 -1.631 3.596 3.343 6.597 37.517 -3.364 1.393 3.209 10.137 -5.137 38.214 20 TT_G47BG47C:C47LU47M_TT T 47 B T 47 M T 47 C T 47 L 1 A G 51 1_555 A C 60 1_555 A G 52 1_555 A C 59 1_555 1.122 -2.012 2.711 -8.117 1.559 32.441 -3.695 -2.987 2.275 2.736 14.242 33.450 21 TT_G47CG47D:C47KC47L_TT T 47 C T 47 L T 47 D T 47 K # _atom_sites.entry_id 1SER _atom_sites.fract_transf_matrix[1][1] 0.008032 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.007758 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008251 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_sites_footnote.id _atom_sites_footnote.text 1 'CIS PROLINE - PRO A 206' 2 'CIS PROLINE - PRO A 245' 3 'CIS PROLINE - PRO A 385' 4 'CIS PROLINE - PRO B 706' 5 'CIS PROLINE - PRO B 745' 6 'CIS PROLINE - PRO B 885' 7 ;TRNA RIBOSES G 7, G 9, G 18, G 19, C 20, D 20A, G 20B, C 48, A 58 AND U 60 HAVE BEEN CONSTRAINED TO 2'ENDO PUCKER. ALL OTHERS ARE 3' ENDO. ; # loop_ _atom_type.symbol C N O P S # loop_