data_1SMX # _entry.id 1SMX # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1SMX pdb_00001smx 10.2210/pdb1smx/pdb RCSB RCSB021838 ? ? WWPDB D_1000021838 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-08-17 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-14 5 'Structure model' 1 4 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' struct_ref_seq_dif 5 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1SMX _pdbx_database_status.recvd_initial_deposition_date 2004-03-09 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1SLJ 'solution structure' unspecified BMRB 6122 'NMR assignment' unspecified PDB 1SN8 'crystal structure' unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Schubert, M.' 1 'Edge, R.E.' 2 'Lario, P.' 3 'Cook, M.A.' 4 'Strynadka, N.C.J.' 5 'Mackie, G.A.' 6 'McIntosh, L.P.' 7 # _citation.id primary _citation.title 'Structural characterization of the RNase E S1 domain and identification of its oligonucleotide-binding and dimerization interfaces.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 341 _citation.page_first 37 _citation.page_last 54 _citation.year 2004 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15312761 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2004.05.061 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Schubert, M.' 1 ? primary 'Edge, R.E.' 2 ? primary 'Lario, P.' 3 ? primary 'Cook, M.A.' 4 ? primary 'Strynadka, N.C.' 5 ? primary 'Mackie, G.A.' 6 ? primary 'McIntosh, L.P.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Ribonuclease E' 10704.134 2 3.1.4.- ? 'S1 domain (residues 35-125)' ? 2 water nat water 18.015 205 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'RNase E' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSHMLEQKKANIYKGKITRIEPSLEAAFVDYGAERHGFLPLKEIAREYFPANYSAHGRPNIKDVLREGQEVIVQIDKEER GNKGAALTTFISLAGS ; _entity_poly.pdbx_seq_one_letter_code_can ;GSHMLEQKKANIYKGKITRIEPSLEAAFVDYGAERHGFLPLKEIAREYFPANYSAHGRPNIKDVLREGQEVIVQIDKEER GNKGAALTTFISLAGS ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 LEU n 1 6 GLU n 1 7 GLN n 1 8 LYS n 1 9 LYS n 1 10 ALA n 1 11 ASN n 1 12 ILE n 1 13 TYR n 1 14 LYS n 1 15 GLY n 1 16 LYS n 1 17 ILE n 1 18 THR n 1 19 ARG n 1 20 ILE n 1 21 GLU n 1 22 PRO n 1 23 SER n 1 24 LEU n 1 25 GLU n 1 26 ALA n 1 27 ALA n 1 28 PHE n 1 29 VAL n 1 30 ASP n 1 31 TYR n 1 32 GLY n 1 33 ALA n 1 34 GLU n 1 35 ARG n 1 36 HIS n 1 37 GLY n 1 38 PHE n 1 39 LEU n 1 40 PRO n 1 41 LEU n 1 42 LYS n 1 43 GLU n 1 44 ILE n 1 45 ALA n 1 46 ARG n 1 47 GLU n 1 48 TYR n 1 49 PHE n 1 50 PRO n 1 51 ALA n 1 52 ASN n 1 53 TYR n 1 54 SER n 1 55 ALA n 1 56 HIS n 1 57 GLY n 1 58 ARG n 1 59 PRO n 1 60 ASN n 1 61 ILE n 1 62 LYS n 1 63 ASP n 1 64 VAL n 1 65 LEU n 1 66 ARG n 1 67 GLU n 1 68 GLY n 1 69 GLN n 1 70 GLU n 1 71 VAL n 1 72 ILE n 1 73 VAL n 1 74 GLN n 1 75 ILE n 1 76 ASP n 1 77 LYS n 1 78 GLU n 1 79 GLU n 1 80 ARG n 1 81 GLY n 1 82 ASN n 1 83 LYS n 1 84 GLY n 1 85 ALA n 1 86 ALA n 1 87 LEU n 1 88 THR n 1 89 THR n 1 90 PHE n 1 91 ILE n 1 92 SER n 1 93 LEU n 1 94 ALA n 1 95 GLY n 1 96 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Escherichia _entity_src_gen.pdbx_gene_src_gene RNE _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 562 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET15b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 30 ? ? ? A . n A 1 2 SER 2 31 ? ? ? A . n A 1 3 HIS 3 32 ? ? ? A . n A 1 4 MET 4 33 ? ? ? A . n A 1 5 LEU 5 34 ? ? ? A . n A 1 6 GLU 6 35 ? ? ? A . n A 1 7 GLN 7 36 ? ? ? A . n A 1 8 LYS 8 37 ? ? ? A . n A 1 9 LYS 9 38 ? ? ? A . n A 1 10 ALA 10 39 39 ALA ALA A . n A 1 11 ASN 11 40 40 ASN ASN A . n A 1 12 ILE 12 41 41 ILE ILE A . n A 1 13 TYR 13 42 42 TYR TYR A . n A 1 14 LYS 14 43 43 LYS LYS A . n A 1 15 GLY 15 44 44 GLY GLY A . n A 1 16 LYS 16 45 45 LYS LYS A . n A 1 17 ILE 17 46 46 ILE ILE A . n A 1 18 THR 18 47 47 THR THR A . n A 1 19 ARG 19 48 48 ARG ARG A . n A 1 20 ILE 20 49 49 ILE ILE A . n A 1 21 GLU 21 50 50 GLU GLU A . n A 1 22 PRO 22 51 51 PRO PRO A . n A 1 23 SER 23 52 52 SER SER A . n A 1 24 LEU 24 53 53 LEU LEU A . n A 1 25 GLU 25 54 54 GLU GLU A . n A 1 26 ALA 26 55 55 ALA ALA A . n A 1 27 ALA 27 56 56 ALA ALA A . n A 1 28 PHE 28 57 57 PHE PHE A . n A 1 29 VAL 29 58 58 VAL VAL A . n A 1 30 ASP 30 59 59 ASP ASP A . n A 1 31 TYR 31 60 60 TYR TYR A . n A 1 32 GLY 32 61 61 GLY GLY A . n A 1 33 ALA 33 62 62 ALA ALA A . n A 1 34 GLU 34 63 63 GLU GLU A . n A 1 35 ARG 35 64 64 ARG ARG A . n A 1 36 HIS 36 65 65 HIS HIS A . n A 1 37 GLY 37 66 66 GLY GLY A . n A 1 38 PHE 38 67 67 PHE PHE A . n A 1 39 LEU 39 68 68 LEU LEU A . n A 1 40 PRO 40 69 69 PRO PRO A . n A 1 41 LEU 41 70 70 LEU LEU A . n A 1 42 LYS 42 71 71 LYS LYS A . n A 1 43 GLU 43 72 72 GLU GLU A . n A 1 44 ILE 44 73 73 ILE ILE A . n A 1 45 ALA 45 74 74 ALA ALA A . n A 1 46 ARG 46 75 75 ARG ARG A . n A 1 47 GLU 47 76 76 GLU GLU A . n A 1 48 TYR 48 77 77 TYR TYR A . n A 1 49 PHE 49 78 78 PHE PHE A . n A 1 50 PRO 50 79 79 PRO PRO A . n A 1 51 ALA 51 80 80 ALA ALA A . n A 1 52 ASN 52 81 81 ASN ASN A . n A 1 53 TYR 53 82 82 TYR TYR A . n A 1 54 SER 54 83 83 SER SER A . n A 1 55 ALA 55 84 84 ALA ALA A . n A 1 56 HIS 56 85 85 HIS HIS A . n A 1 57 GLY 57 86 86 GLY GLY A . n A 1 58 ARG 58 87 87 ARG ARG A . n A 1 59 PRO 59 88 88 PRO PRO A . n A 1 60 ASN 60 89 89 ASN ASN A . n A 1 61 ILE 61 90 90 ILE ILE A . n A 1 62 LYS 62 91 91 LYS LYS A . n A 1 63 ASP 63 92 92 ASP ASP A . n A 1 64 VAL 64 93 93 VAL VAL A . n A 1 65 LEU 65 94 94 LEU LEU A . n A 1 66 ARG 66 95 95 ARG ARG A . n A 1 67 GLU 67 96 96 GLU GLU A . n A 1 68 GLY 68 97 97 GLY GLY A . n A 1 69 GLN 69 98 98 GLN GLN A . n A 1 70 GLU 70 99 99 GLU GLU A . n A 1 71 VAL 71 100 100 VAL VAL A . n A 1 72 ILE 72 101 101 ILE ILE A . n A 1 73 VAL 73 102 102 VAL VAL A . n A 1 74 GLN 74 103 103 GLN GLN A . n A 1 75 ILE 75 104 104 ILE ILE A . n A 1 76 ASP 76 105 105 ASP ASP A . n A 1 77 LYS 77 106 106 LYS LYS A . n A 1 78 GLU 78 107 107 GLU GLU A . n A 1 79 GLU 79 108 108 GLU GLU A . n A 1 80 ARG 80 109 109 ARG ARG A . n A 1 81 GLY 81 110 110 GLY GLY A . n A 1 82 ASN 82 111 111 ASN ASN A . n A 1 83 LYS 83 112 112 LYS LYS A . n A 1 84 GLY 84 113 113 GLY GLY A . n A 1 85 ALA 85 114 114 ALA ALA A . n A 1 86 ALA 86 115 115 ALA ALA A . n A 1 87 LEU 87 116 116 LEU LEU A . n A 1 88 THR 88 117 117 THR THR A . n A 1 89 THR 89 118 118 THR THR A . n A 1 90 PHE 90 119 119 PHE PHE A . n A 1 91 ILE 91 120 120 ILE ILE A . n A 1 92 SER 92 121 121 SER SER A . n A 1 93 LEU 93 122 122 LEU LEU A . n A 1 94 ALA 94 123 123 ALA ALA A . n A 1 95 GLY 95 124 124 GLY GLY A . n A 1 96 SER 96 125 125 SER SER A . n B 1 1 GLY 1 30 ? ? ? B . n B 1 2 SER 2 31 ? ? ? B . n B 1 3 HIS 3 32 ? ? ? B . n B 1 4 MET 4 33 ? ? ? B . n B 1 5 LEU 5 34 ? ? ? B . n B 1 6 GLU 6 35 ? ? ? B . n B 1 7 GLN 7 36 ? ? ? B . n B 1 8 LYS 8 37 ? ? ? B . n B 1 9 LYS 9 38 ? ? ? B . n B 1 10 ALA 10 39 39 ALA ALA B . n B 1 11 ASN 11 40 40 ASN ASN B . n B 1 12 ILE 12 41 41 ILE ILE B . n B 1 13 TYR 13 42 42 TYR TYR B . n B 1 14 LYS 14 43 43 LYS LYS B . n B 1 15 GLY 15 44 44 GLY GLY B . n B 1 16 LYS 16 45 45 LYS LYS B . n B 1 17 ILE 17 46 46 ILE ILE B . n B 1 18 THR 18 47 47 THR THR B . n B 1 19 ARG 19 48 48 ARG ARG B . n B 1 20 ILE 20 49 49 ILE ILE B . n B 1 21 GLU 21 50 50 GLU GLU B . n B 1 22 PRO 22 51 51 PRO PRO B . n B 1 23 SER 23 52 52 SER SER B . n B 1 24 LEU 24 53 53 LEU LEU B . n B 1 25 GLU 25 54 54 GLU GLU B . n B 1 26 ALA 26 55 55 ALA ALA B . n B 1 27 ALA 27 56 56 ALA ALA B . n B 1 28 PHE 28 57 57 PHE PHE B . n B 1 29 VAL 29 58 58 VAL VAL B . n B 1 30 ASP 30 59 59 ASP ASP B . n B 1 31 TYR 31 60 60 TYR TYR B . n B 1 32 GLY 32 61 61 GLY GLY B . n B 1 33 ALA 33 62 62 ALA ALA B . n B 1 34 GLU 34 63 63 GLU GLU B . n B 1 35 ARG 35 64 64 ARG ARG B . n B 1 36 HIS 36 65 65 HIS HIS B . n B 1 37 GLY 37 66 66 GLY GLY B . n B 1 38 PHE 38 67 67 PHE PHE B . n B 1 39 LEU 39 68 68 LEU LEU B . n B 1 40 PRO 40 69 69 PRO PRO B . n B 1 41 LEU 41 70 70 LEU LEU B . n B 1 42 LYS 42 71 71 LYS LYS B . n B 1 43 GLU 43 72 72 GLU GLU B . n B 1 44 ILE 44 73 73 ILE ILE B . n B 1 45 ALA 45 74 74 ALA ALA B . n B 1 46 ARG 46 75 75 ARG ARG B . n B 1 47 GLU 47 76 76 GLU GLU B . n B 1 48 TYR 48 77 77 TYR TYR B . n B 1 49 PHE 49 78 78 PHE PHE B . n B 1 50 PRO 50 79 79 PRO PRO B . n B 1 51 ALA 51 80 80 ALA ALA B . n B 1 52 ASN 52 81 ? ? ? B . n B 1 53 TYR 53 82 ? ? ? B . n B 1 54 SER 54 83 ? ? ? B . n B 1 55 ALA 55 84 ? ? ? B . n B 1 56 HIS 56 85 ? ? ? B . n B 1 57 GLY 57 86 ? ? ? B . n B 1 58 ARG 58 87 87 ARG ALA B . n B 1 59 PRO 59 88 88 PRO PRO B . n B 1 60 ASN 60 89 89 ASN ASN B . n B 1 61 ILE 61 90 90 ILE ILE B . n B 1 62 LYS 62 91 91 LYS LYS B . n B 1 63 ASP 63 92 92 ASP ASP B . n B 1 64 VAL 64 93 93 VAL VAL B . n B 1 65 LEU 65 94 94 LEU LEU B . n B 1 66 ARG 66 95 95 ARG ARG B . n B 1 67 GLU 67 96 96 GLU GLU B . n B 1 68 GLY 68 97 97 GLY GLY B . n B 1 69 GLN 69 98 98 GLN GLN B . n B 1 70 GLU 70 99 99 GLU GLU B . n B 1 71 VAL 71 100 100 VAL VAL B . n B 1 72 ILE 72 101 101 ILE ILE B . n B 1 73 VAL 73 102 102 VAL VAL B . n B 1 74 GLN 74 103 103 GLN GLN B . n B 1 75 ILE 75 104 104 ILE ILE B . n B 1 76 ASP 76 105 105 ASP ASP B . n B 1 77 LYS 77 106 106 LYS LYS B . n B 1 78 GLU 78 107 107 GLU GLU B . n B 1 79 GLU 79 108 108 GLU GLU B . n B 1 80 ARG 80 109 109 ARG ARG B . n B 1 81 GLY 81 110 110 GLY GLY B . n B 1 82 ASN 82 111 111 ASN ASN B . n B 1 83 LYS 83 112 112 LYS LYS B . n B 1 84 GLY 84 113 113 GLY GLY B . n B 1 85 ALA 85 114 114 ALA ALA B . n B 1 86 ALA 86 115 115 ALA ALA B . n B 1 87 LEU 87 116 116 LEU LEU B . n B 1 88 THR 88 117 117 THR THR B . n B 1 89 THR 89 118 118 THR THR B . n B 1 90 PHE 90 119 119 PHE PHE B . n B 1 91 ILE 91 120 120 ILE ILE B . n B 1 92 SER 92 121 121 SER SER B . n B 1 93 LEU 93 122 122 LEU LEU B . n B 1 94 ALA 94 123 123 ALA ALA B . n B 1 95 GLY 95 124 124 GLY GLY B . n B 1 96 SER 96 125 125 SER SER B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 126 4 HOH HOH A . C 2 HOH 2 127 5 HOH HOH A . C 2 HOH 3 128 7 HOH HOH A . C 2 HOH 4 129 8 HOH HOH A . C 2 HOH 5 130 10 HOH HOH A . C 2 HOH 6 131 11 HOH HOH A . C 2 HOH 7 132 12 HOH HOH A . C 2 HOH 8 133 13 HOH HOH A . C 2 HOH 9 134 15 HOH HOH A . C 2 HOH 10 135 17 HOH HOH A . C 2 HOH 11 136 20 HOH HOH A . C 2 HOH 12 137 21 HOH HOH A . C 2 HOH 13 138 22 HOH HOH A . C 2 HOH 14 139 23 HOH HOH A . C 2 HOH 15 140 24 HOH HOH A . C 2 HOH 16 141 27 HOH HOH A . C 2 HOH 17 142 28 HOH HOH A . C 2 HOH 18 143 29 HOH HOH A . C 2 HOH 19 144 33 HOH HOH A . C 2 HOH 20 145 35 HOH HOH A . C 2 HOH 21 146 36 HOH HOH A . C 2 HOH 22 147 37 HOH HOH A . C 2 HOH 23 148 38 HOH HOH A . C 2 HOH 24 149 39 HOH HOH A . C 2 HOH 25 150 40 HOH HOH A . C 2 HOH 26 151 43 HOH HOH A . C 2 HOH 27 152 44 HOH HOH A . C 2 HOH 28 153 45 HOH HOH A . C 2 HOH 29 154 49 HOH HOH A . C 2 HOH 30 155 50 HOH HOH A . C 2 HOH 31 156 51 HOH HOH A . C 2 HOH 32 157 52 HOH HOH A . C 2 HOH 33 158 53 HOH HOH A . C 2 HOH 34 159 54 HOH HOH A . C 2 HOH 35 160 55 HOH HOH A . C 2 HOH 36 161 58 HOH HOH A . C 2 HOH 37 162 60 HOH HOH A . C 2 HOH 38 163 62 HOH HOH A . C 2 HOH 39 164 65 HOH HOH A . C 2 HOH 40 165 66 HOH HOH A . C 2 HOH 41 166 68 HOH HOH A . C 2 HOH 42 167 73 HOH HOH A . C 2 HOH 43 168 74 HOH HOH A . C 2 HOH 44 169 75 HOH HOH A . C 2 HOH 45 170 76 HOH HOH A . C 2 HOH 46 171 77 HOH HOH A . C 2 HOH 47 172 81 HOH HOH A . C 2 HOH 48 173 83 HOH HOH A . C 2 HOH 49 174 84 HOH HOH A . C 2 HOH 50 175 85 HOH HOH A . C 2 HOH 51 176 86 HOH HOH A . C 2 HOH 52 177 87 HOH HOH A . C 2 HOH 53 178 88 HOH HOH A . C 2 HOH 54 179 89 HOH HOH A . C 2 HOH 55 180 90 HOH HOH A . C 2 HOH 56 181 93 HOH HOH A . C 2 HOH 57 182 94 HOH HOH A . C 2 HOH 58 183 97 HOH HOH A . C 2 HOH 59 184 98 HOH HOH A . C 2 HOH 60 185 100 HOH HOH A . C 2 HOH 61 186 101 HOH HOH A . C 2 HOH 62 187 102 HOH HOH A . C 2 HOH 63 188 113 HOH HOH A . C 2 HOH 64 189 114 HOH HOH A . C 2 HOH 65 190 116 HOH HOH A . C 2 HOH 66 191 117 HOH HOH A . C 2 HOH 67 192 118 HOH HOH A . C 2 HOH 68 193 120 HOH HOH A . C 2 HOH 69 194 121 HOH HOH A . C 2 HOH 70 195 127 HOH HOH A . C 2 HOH 71 196 133 HOH HOH A . C 2 HOH 72 197 137 HOH HOH A . C 2 HOH 73 198 139 HOH HOH A . C 2 HOH 74 199 140 HOH HOH A . C 2 HOH 75 200 141 HOH HOH A . C 2 HOH 76 201 142 HOH HOH A . C 2 HOH 77 202 143 HOH HOH A . C 2 HOH 78 203 147 HOH HOH A . C 2 HOH 79 204 148 HOH HOH A . C 2 HOH 80 205 149 HOH HOH A . C 2 HOH 81 206 150 HOH HOH A . C 2 HOH 82 207 151 HOH HOH A . C 2 HOH 83 208 154 HOH HOH A . C 2 HOH 84 209 155 HOH HOH A . C 2 HOH 85 210 160 HOH HOH A . C 2 HOH 86 211 161 HOH HOH A . C 2 HOH 87 212 168 HOH HOH A . C 2 HOH 88 213 169 HOH HOH A . C 2 HOH 89 214 170 HOH HOH A . C 2 HOH 90 215 171 HOH HOH A . C 2 HOH 91 216 173 HOH HOH A . C 2 HOH 92 217 174 HOH HOH A . C 2 HOH 93 218 175 HOH HOH A . C 2 HOH 94 219 176 HOH HOH A . C 2 HOH 95 220 177 HOH HOH A . C 2 HOH 96 221 178 HOH HOH A . C 2 HOH 97 222 179 HOH HOH A . C 2 HOH 98 223 180 HOH HOH A . C 2 HOH 99 224 181 HOH HOH A . C 2 HOH 100 225 182 HOH HOH A . C 2 HOH 101 226 183 HOH HOH A . C 2 HOH 102 227 184 HOH HOH A . C 2 HOH 103 228 186 HOH HOH A . C 2 HOH 104 229 189 HOH HOH A . C 2 HOH 105 230 190 HOH HOH A . C 2 HOH 106 231 191 HOH HOH A . C 2 HOH 107 232 192 HOH HOH A . C 2 HOH 108 233 193 HOH HOH A . C 2 HOH 109 234 195 HOH HOH A . C 2 HOH 110 235 196 HOH HOH A . C 2 HOH 111 236 197 HOH HOH A . C 2 HOH 112 237 199 HOH HOH A . C 2 HOH 113 238 201 HOH HOH A . C 2 HOH 114 239 203 HOH HOH A . C 2 HOH 115 240 205 HOH HOH A . D 2 HOH 1 126 1 HOH HOH B . D 2 HOH 2 127 2 HOH HOH B . D 2 HOH 3 128 3 HOH HOH B . D 2 HOH 4 129 6 HOH HOH B . D 2 HOH 5 130 9 HOH HOH B . D 2 HOH 6 131 14 HOH HOH B . D 2 HOH 7 132 16 HOH HOH B . D 2 HOH 8 133 18 HOH HOH B . D 2 HOH 9 134 19 HOH HOH B . D 2 HOH 10 135 25 HOH HOH B . D 2 HOH 11 136 26 HOH HOH B . D 2 HOH 12 137 30 HOH HOH B . D 2 HOH 13 138 31 HOH HOH B . D 2 HOH 14 139 32 HOH HOH B . D 2 HOH 15 140 34 HOH HOH B . D 2 HOH 16 141 41 HOH HOH B . D 2 HOH 17 142 42 HOH HOH B . D 2 HOH 18 143 46 HOH HOH B . D 2 HOH 19 144 47 HOH HOH B . D 2 HOH 20 145 48 HOH HOH B . D 2 HOH 21 146 56 HOH HOH B . D 2 HOH 22 147 57 HOH HOH B . D 2 HOH 23 148 59 HOH HOH B . D 2 HOH 24 149 61 HOH HOH B . D 2 HOH 25 150 63 HOH HOH B . D 2 HOH 26 151 64 HOH HOH B . D 2 HOH 27 152 67 HOH HOH B . D 2 HOH 28 153 69 HOH HOH B . D 2 HOH 29 154 70 HOH HOH B . D 2 HOH 30 155 71 HOH HOH B . D 2 HOH 31 156 72 HOH HOH B . D 2 HOH 32 157 78 HOH HOH B . D 2 HOH 33 158 79 HOH HOH B . D 2 HOH 34 159 80 HOH HOH B . D 2 HOH 35 160 82 HOH HOH B . D 2 HOH 36 161 91 HOH HOH B . D 2 HOH 37 162 92 HOH HOH B . D 2 HOH 38 163 95 HOH HOH B . D 2 HOH 39 164 96 HOH HOH B . D 2 HOH 40 165 99 HOH HOH B . D 2 HOH 41 166 103 HOH HOH B . D 2 HOH 42 167 104 HOH HOH B . D 2 HOH 43 168 105 HOH HOH B . D 2 HOH 44 169 106 HOH HOH B . D 2 HOH 45 170 107 HOH HOH B . D 2 HOH 46 171 108 HOH HOH B . D 2 HOH 47 172 109 HOH HOH B . D 2 HOH 48 173 110 HOH HOH B . D 2 HOH 49 174 111 HOH HOH B . D 2 HOH 50 175 112 HOH HOH B . D 2 HOH 51 176 115 HOH HOH B . D 2 HOH 52 177 119 HOH HOH B . D 2 HOH 53 178 122 HOH HOH B . D 2 HOH 54 179 123 HOH HOH B . D 2 HOH 55 180 124 HOH HOH B . D 2 HOH 56 181 125 HOH HOH B . D 2 HOH 57 182 126 HOH HOH B . D 2 HOH 58 183 128 HOH HOH B . D 2 HOH 59 184 129 HOH HOH B . D 2 HOH 60 185 130 HOH HOH B . D 2 HOH 61 186 131 HOH HOH B . D 2 HOH 62 187 132 HOH HOH B . D 2 HOH 63 188 134 HOH HOH B . D 2 HOH 64 189 135 HOH HOH B . D 2 HOH 65 190 136 HOH HOH B . D 2 HOH 66 191 138 HOH HOH B . D 2 HOH 67 192 144 HOH HOH B . D 2 HOH 68 193 145 HOH HOH B . D 2 HOH 69 194 146 HOH HOH B . D 2 HOH 70 195 152 HOH HOH B . D 2 HOH 71 196 153 HOH HOH B . D 2 HOH 72 197 156 HOH HOH B . D 2 HOH 73 198 157 HOH HOH B . D 2 HOH 74 199 158 HOH HOH B . D 2 HOH 75 200 159 HOH HOH B . D 2 HOH 76 201 162 HOH HOH B . D 2 HOH 77 202 163 HOH HOH B . D 2 HOH 78 203 164 HOH HOH B . D 2 HOH 79 204 165 HOH HOH B . D 2 HOH 80 205 166 HOH HOH B . D 2 HOH 81 206 167 HOH HOH B . D 2 HOH 82 207 172 HOH HOH B . D 2 HOH 83 208 185 HOH HOH B . D 2 HOH 84 209 187 HOH HOH B . D 2 HOH 85 210 188 HOH HOH B . D 2 HOH 86 211 194 HOH HOH B . D 2 HOH 87 212 198 HOH HOH B . D 2 HOH 88 213 200 HOH HOH B . D 2 HOH 89 214 202 HOH HOH B . D 2 HOH 90 215 204 HOH HOH B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 A LYS 91 ? CD ? A LYS 62 CD 2 1 Y 0 A LYS 91 ? CE ? A LYS 62 CE 3 1 Y 0 A LYS 91 ? NZ ? A LYS 62 NZ 4 1 Y 0 A ARG 95 ? NE ? A ARG 66 NE 5 1 Y 0 A ARG 95 ? CZ ? A ARG 66 CZ 6 1 Y 0 A ARG 95 ? NH1 ? A ARG 66 NH1 7 1 Y 0 A ARG 95 ? NH2 ? A ARG 66 NH2 8 1 Y 0 A LYS 106 ? CD ? A LYS 77 CD 9 1 Y 0 A LYS 106 ? CE ? A LYS 77 CE 10 1 Y 0 A LYS 106 ? NZ ? A LYS 77 NZ 11 1 Y 0 B ARG 48 ? CZ ? B ARG 19 CZ 12 1 Y 0 B ARG 48 ? NH1 ? B ARG 19 NH1 13 1 Y 0 B ARG 48 ? NH2 ? B ARG 19 NH2 14 1 Y 1 B ARG 87 ? CG ? B ARG 58 CG 15 1 Y 1 B ARG 87 ? CD ? B ARG 58 CD 16 1 Y 1 B ARG 87 ? NE ? B ARG 58 NE 17 1 Y 1 B ARG 87 ? CZ ? B ARG 58 CZ 18 1 Y 1 B ARG 87 ? NH1 ? B ARG 58 NH1 19 1 Y 1 B ARG 87 ? NH2 ? B ARG 58 NH2 20 1 Y 0 B LYS 91 ? CD ? B LYS 62 CD 21 1 Y 0 B LYS 91 ? CE ? B LYS 62 CE 22 1 Y 0 B LYS 91 ? NZ ? B LYS 62 NZ 23 1 Y 0 B ARG 95 ? NE ? B ARG 66 NE 24 1 Y 0 B ARG 95 ? CZ ? B ARG 66 CZ 25 1 Y 0 B ARG 95 ? NH1 ? B ARG 66 NH1 26 1 Y 0 B ARG 95 ? NH2 ? B ARG 66 NH2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.1.24 ? 1 DENZO 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 SOLVE phasing . ? 4 # _cell.entry_id 1SMX _cell.length_a 70.378 _cell.length_b 70.378 _cell.length_c 87.917 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1SMX _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? # _exptl.entry_id 1SMX _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 51.3 _exptl_crystal.description ? _exptl_crystal.density_Matthews 2.5 _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details 'PEG 8000, sodium cacodylate, sodium acetate, glycerol, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210' _diffrn_detector.pdbx_collection_date 2003-08-28 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Double crystal, Si(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0781 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 8.2.1' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 8.2.1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0781 # _reflns.entry_id 1SMX _reflns.observed_criterion_sigma_F 0.0 _reflns.observed_criterion_sigma_I 0.0 _reflns.d_resolution_high 1.8 _reflns.d_resolution_low 50 _reflns.number_all 21123 _reflns.number_obs 20912 _reflns.percent_possible_obs 99.0 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.05 _reflns.pdbx_netI_over_sigmaI 30.8 _reflns.B_iso_Wilson_estimate 29.2 _reflns.pdbx_redundancy 7.76 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.80 _reflns_shell.d_res_low 1.86 _reflns_shell.percent_possible_all 93.5 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.378 _reflns_shell.meanI_over_sigI_obs 4.65 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1SMX _refine.ls_number_reflns_obs 19874 _refine.ls_number_reflns_all 19874 _refine.pdbx_ls_sigma_I 0.0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 50 _refine.ls_d_res_high 1.80 _refine.ls_percent_reflns_obs 98.99 _refine.ls_R_factor_obs 0.20009 _refine.ls_R_factor_all 0.20009 _refine.ls_R_factor_R_work 0.19854 _refine.ls_R_factor_R_free 0.23109 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 1012 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.958 _refine.correlation_coeff_Fo_to_Fc_free 0.949 _refine.B_iso_mean 27.342 _refine.aniso_B[1][1] 0.82 _refine.aniso_B[2][2] 0.82 _refine.aniso_B[3][3] -1.64 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'Pb derivative structure' _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.121 _refine.pdbx_overall_ESU_R_Free 0.117 _refine.overall_SU_ML 0.087 _refine.overall_SU_B 2.833 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1327 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 205 _refine_hist.number_atoms_total 1532 _refine_hist.d_res_high 1.80 _refine_hist.d_res_low 50 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.013 0.021 ? 1332 'X-RAY DIFFRACTION' ? r_bond_other_d 0.002 0.020 ? 1217 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.315 1.965 ? 1798 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.736 3.000 ? 2829 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 7.073 5.000 ? 167 'X-RAY DIFFRACTION' ? r_chiral_restr 0.085 0.200 ? 196 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.020 ? 1503 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.002 0.020 ? 269 'X-RAY DIFFRACTION' ? r_nbd_refined 0.206 0.200 ? 196 'X-RAY DIFFRACTION' ? r_nbd_other 0.246 0.200 ? 1364 'X-RAY DIFFRACTION' ? r_nbtor_other 0.083 0.200 ? 840 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.156 0.200 ? 130 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.200 0.200 ? 3 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.272 0.200 ? 57 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.222 0.200 ? 27 'X-RAY DIFFRACTION' ? r_mcbond_it 1.073 1.500 ? 838 'X-RAY DIFFRACTION' ? r_mcangle_it 1.948 2.000 ? 1337 'X-RAY DIFFRACTION' ? r_scbond_it 2.584 3.000 ? 494 'X-RAY DIFFRACTION' ? r_scangle_it 4.538 4.500 ? 461 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.800 _refine_ls_shell.d_res_low 1.847 _refine_ls_shell.number_reflns_R_work 1310 _refine_ls_shell.R_factor_R_work 0.245 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.259 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 73 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _database_PDB_matrix.entry_id 1SMX _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1SMX _struct.title 'Crystal structure of the S1 domain of RNase E from E. coli (native)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1SMX _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'OB-fold, RNA-binding, HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RNE_ECOLI _struct_ref.pdbx_db_accession P21513 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;EQKKANIYKGKITRIEPSLEAAFVDYGAERHGFLPLKEIAREYFPANYSAHGRPNIKDVLREGQEVIVQIDKEERGNKGA ALTTFISLAGS ; _struct_ref.pdbx_align_begin 35 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1SMX A 6 ? 96 ? P21513 35 ? 125 ? 35 125 2 1 1SMX B 6 ? 96 ? P21513 35 ? 125 ? 35 125 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1SMX GLY A 1 ? UNP P21513 ? ? 'cloning artifact' 30 1 1 1SMX SER A 2 ? UNP P21513 ? ? 'cloning artifact' 31 2 1 1SMX HIS A 3 ? UNP P21513 ? ? 'cloning artifact' 32 3 1 1SMX MET A 4 ? UNP P21513 ? ? 'cloning artifact' 33 4 1 1SMX LEU A 5 ? UNP P21513 ? ? 'cloning artifact' 34 5 2 1SMX GLY B 1 ? UNP P21513 ? ? 'cloning artifact' 30 6 2 1SMX SER B 2 ? UNP P21513 ? ? 'cloning artifact' 31 7 2 1SMX HIS B 3 ? UNP P21513 ? ? 'cloning artifact' 32 8 2 1SMX MET B 4 ? UNP P21513 ? ? 'cloning artifact' 33 9 2 1SMX LEU B 5 ? UNP P21513 ? ? 'cloning artifact' 34 10 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 22 ? LEU A 24 ? PRO A 51 LEU A 53 5 ? 3 HELX_P HELX_P2 2 LYS A 42 ? ILE A 44 ? LYS A 71 ILE A 73 5 ? 3 HELX_P HELX_P3 3 ALA A 45 ? PHE A 49 ? ALA A 74 PHE A 78 5 ? 5 HELX_P HELX_P4 4 ASN A 60 ? VAL A 64 ? ASN A 89 VAL A 93 5 ? 5 HELX_P HELX_P5 5 PRO B 22 ? LEU B 24 ? PRO B 51 LEU B 53 5 ? 3 HELX_P HELX_P6 6 LYS B 42 ? ILE B 44 ? LYS B 71 ILE B 73 5 ? 3 HELX_P HELX_P7 7 ALA B 45 ? PHE B 49 ? ALA B 74 PHE B 78 5 ? 5 HELX_P HELX_P8 8 ASN B 60 ? LEU B 65 ? ASN B 89 LEU B 94 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 13 ? GLU A 21 ? TYR A 42 GLU A 50 A 2 ALA A 26 ? ASP A 30 ? ALA A 55 ASP A 59 A 3 GLY A 37 ? PRO A 40 ? GLY A 66 PRO A 69 A 4 ALA A 86 ? THR A 88 ? ALA A 115 THR A 117 A 5 GLU A 70 ? LYS A 77 ? GLU A 99 LYS A 106 A 6 TYR A 13 ? GLU A 21 ? TYR A 42 GLU A 50 B 1 TYR B 13 ? GLU B 21 ? TYR B 42 GLU B 50 B 2 ALA B 26 ? ASP B 30 ? ALA B 55 ASP B 59 B 3 GLY B 37 ? PRO B 40 ? GLY B 66 PRO B 69 B 4 ALA B 86 ? THR B 88 ? ALA B 115 THR B 117 B 5 GLU B 70 ? LYS B 77 ? GLU B 99 LYS B 106 B 6 TYR B 13 ? GLU B 21 ? TYR B 42 GLU B 50 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ARG A 19 ? N ARG A 48 O PHE A 28 ? O PHE A 57 A 2 3 N VAL A 29 ? N VAL A 58 O GLY A 37 ? O GLY A 66 A 3 4 N PHE A 38 ? N PHE A 67 O LEU A 87 ? O LEU A 116 A 4 5 O ALA A 86 ? O ALA A 115 N ASP A 76 ? N ASP A 105 A 5 6 O VAL A 71 ? O VAL A 100 N GLY A 15 ? N GLY A 44 B 1 2 N ARG B 19 ? N ARG B 48 O PHE B 28 ? O PHE B 57 B 2 3 N VAL B 29 ? N VAL B 58 O GLY B 37 ? O GLY B 66 B 3 4 N PHE B 38 ? N PHE B 67 O LEU B 87 ? O LEU B 116 B 4 5 O ALA B 86 ? O ALA B 115 N ASP B 76 ? N ASP B 105 B 5 6 O VAL B 71 ? O VAL B 100 N GLY B 15 ? N GLY B 44 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OG _pdbx_validate_close_contact.auth_asym_id_1 B _pdbx_validate_close_contact.auth_comp_id_1 SER _pdbx_validate_close_contact.auth_seq_id_1 125 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 138 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.14 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CG A LYS 91 ? ? CD A LYS 91 ? ? 1.191 1.520 -0.329 0.034 N 2 1 NE B ARG 48 ? ? CZ B ARG 48 ? ? 1.038 1.326 -0.288 0.013 N 3 1 CD B ARG 95 ? ? NE B ARG 95 ? ? 1.184 1.460 -0.276 0.017 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CD B ARG 48 ? ? NE B ARG 48 ? ? CZ B ARG 48 ? ? 132.78 123.60 9.18 1.40 N 2 1 CG B ARG 95 ? ? CD B ARG 95 ? ? NE B ARG 95 ? ? 126.96 111.80 15.16 2.10 N # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 GLY _pdbx_validate_peptide_omega.auth_asym_id_1 B _pdbx_validate_peptide_omega.auth_seq_id_1 124 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 SER _pdbx_validate_peptide_omega.auth_asym_id_2 B _pdbx_validate_peptide_omega.auth_seq_id_2 125 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega -143.91 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id ARG _pdbx_validate_planes.auth_asym_id A _pdbx_validate_planes.auth_seq_id 95 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.235 _pdbx_validate_planes.type 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 30 ? A GLY 1 2 1 Y 1 A SER 31 ? A SER 2 3 1 Y 1 A HIS 32 ? A HIS 3 4 1 Y 1 A MET 33 ? A MET 4 5 1 Y 1 A LEU 34 ? A LEU 5 6 1 Y 1 A GLU 35 ? A GLU 6 7 1 Y 1 A GLN 36 ? A GLN 7 8 1 Y 1 A LYS 37 ? A LYS 8 9 1 Y 1 A LYS 38 ? A LYS 9 10 1 Y 1 B GLY 30 ? B GLY 1 11 1 Y 1 B SER 31 ? B SER 2 12 1 Y 1 B HIS 32 ? B HIS 3 13 1 Y 1 B MET 33 ? B MET 4 14 1 Y 1 B LEU 34 ? B LEU 5 15 1 Y 1 B GLU 35 ? B GLU 6 16 1 Y 1 B GLN 36 ? B GLN 7 17 1 Y 1 B LYS 37 ? B LYS 8 18 1 Y 1 B LYS 38 ? B LYS 9 19 1 Y 1 B ASN 81 ? B ASN 52 20 1 Y 1 B TYR 82 ? B TYR 53 21 1 Y 1 B SER 83 ? B SER 54 22 1 Y 1 B ALA 84 ? B ALA 55 23 1 Y 1 B HIS 85 ? B HIS 56 24 1 Y 1 B GLY 86 ? B GLY 57 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 ILE N N N N 147 ILE CA C N S 148 ILE C C N N 149 ILE O O N N 150 ILE CB C N S 151 ILE CG1 C N N 152 ILE CG2 C N N 153 ILE CD1 C N N 154 ILE OXT O N N 155 ILE H H N N 156 ILE H2 H N N 157 ILE HA H N N 158 ILE HB H N N 159 ILE HG12 H N N 160 ILE HG13 H N N 161 ILE HG21 H N N 162 ILE HG22 H N N 163 ILE HG23 H N N 164 ILE HD11 H N N 165 ILE HD12 H N N 166 ILE HD13 H N N 167 ILE HXT H N N 168 LEU N N N N 169 LEU CA C N S 170 LEU C C N N 171 LEU O O N N 172 LEU CB C N N 173 LEU CG C N N 174 LEU CD1 C N N 175 LEU CD2 C N N 176 LEU OXT O N N 177 LEU H H N N 178 LEU H2 H N N 179 LEU HA H N N 180 LEU HB2 H N N 181 LEU HB3 H N N 182 LEU HG H N N 183 LEU HD11 H N N 184 LEU HD12 H N N 185 LEU HD13 H N N 186 LEU HD21 H N N 187 LEU HD22 H N N 188 LEU HD23 H N N 189 LEU HXT H N N 190 LYS N N N N 191 LYS CA C N S 192 LYS C C N N 193 LYS O O N N 194 LYS CB C N N 195 LYS CG C N N 196 LYS CD C N N 197 LYS CE C N N 198 LYS NZ N N N 199 LYS OXT O N N 200 LYS H H N N 201 LYS H2 H N N 202 LYS HA H N N 203 LYS HB2 H N N 204 LYS HB3 H N N 205 LYS HG2 H N N 206 LYS HG3 H N N 207 LYS HD2 H N N 208 LYS HD3 H N N 209 LYS HE2 H N N 210 LYS HE3 H N N 211 LYS HZ1 H N N 212 LYS HZ2 H N N 213 LYS HZ3 H N N 214 LYS HXT H N N 215 MET N N N N 216 MET CA C N S 217 MET C C N N 218 MET O O N N 219 MET CB C N N 220 MET CG C N N 221 MET SD S N N 222 MET CE C N N 223 MET OXT O N N 224 MET H H N N 225 MET H2 H N N 226 MET HA H N N 227 MET HB2 H N N 228 MET HB3 H N N 229 MET HG2 H N N 230 MET HG3 H N N 231 MET HE1 H N N 232 MET HE2 H N N 233 MET HE3 H N N 234 MET HXT H N N 235 PHE N N N N 236 PHE CA C N S 237 PHE C C N N 238 PHE O O N N 239 PHE CB C N N 240 PHE CG C Y N 241 PHE CD1 C Y N 242 PHE CD2 C Y N 243 PHE CE1 C Y N 244 PHE CE2 C Y N 245 PHE CZ C Y N 246 PHE OXT O N N 247 PHE H H N N 248 PHE H2 H N N 249 PHE HA H N N 250 PHE HB2 H N N 251 PHE HB3 H N N 252 PHE HD1 H N N 253 PHE HD2 H N N 254 PHE HE1 H N N 255 PHE HE2 H N N 256 PHE HZ H N N 257 PHE HXT H N N 258 PRO N N N N 259 PRO CA C N S 260 PRO C C N N 261 PRO O O N N 262 PRO CB C N N 263 PRO CG C N N 264 PRO CD C N N 265 PRO OXT O N N 266 PRO H H N N 267 PRO HA H N N 268 PRO HB2 H N N 269 PRO HB3 H N N 270 PRO HG2 H N N 271 PRO HG3 H N N 272 PRO HD2 H N N 273 PRO HD3 H N N 274 PRO HXT H N N 275 SER N N N N 276 SER CA C N S 277 SER C C N N 278 SER O O N N 279 SER CB C N N 280 SER OG O N N 281 SER OXT O N N 282 SER H H N N 283 SER H2 H N N 284 SER HA H N N 285 SER HB2 H N N 286 SER HB3 H N N 287 SER HG H N N 288 SER HXT H N N 289 THR N N N N 290 THR CA C N S 291 THR C C N N 292 THR O O N N 293 THR CB C N R 294 THR OG1 O N N 295 THR CG2 C N N 296 THR OXT O N N 297 THR H H N N 298 THR H2 H N N 299 THR HA H N N 300 THR HB H N N 301 THR HG1 H N N 302 THR HG21 H N N 303 THR HG22 H N N 304 THR HG23 H N N 305 THR HXT H N N 306 TYR N N N N 307 TYR CA C N S 308 TYR C C N N 309 TYR O O N N 310 TYR CB C N N 311 TYR CG C Y N 312 TYR CD1 C Y N 313 TYR CD2 C Y N 314 TYR CE1 C Y N 315 TYR CE2 C Y N 316 TYR CZ C Y N 317 TYR OH O N N 318 TYR OXT O N N 319 TYR H H N N 320 TYR H2 H N N 321 TYR HA H N N 322 TYR HB2 H N N 323 TYR HB3 H N N 324 TYR HD1 H N N 325 TYR HD2 H N N 326 TYR HE1 H N N 327 TYR HE2 H N N 328 TYR HH H N N 329 TYR HXT H N N 330 VAL N N N N 331 VAL CA C N S 332 VAL C C N N 333 VAL O O N N 334 VAL CB C N N 335 VAL CG1 C N N 336 VAL CG2 C N N 337 VAL OXT O N N 338 VAL H H N N 339 VAL H2 H N N 340 VAL HA H N N 341 VAL HB H N N 342 VAL HG11 H N N 343 VAL HG12 H N N 344 VAL HG13 H N N 345 VAL HG21 H N N 346 VAL HG22 H N N 347 VAL HG23 H N N 348 VAL HXT H N N 349 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 HOH O H1 sing N N 137 HOH O H2 sing N N 138 ILE N CA sing N N 139 ILE N H sing N N 140 ILE N H2 sing N N 141 ILE CA C sing N N 142 ILE CA CB sing N N 143 ILE CA HA sing N N 144 ILE C O doub N N 145 ILE C OXT sing N N 146 ILE CB CG1 sing N N 147 ILE CB CG2 sing N N 148 ILE CB HB sing N N 149 ILE CG1 CD1 sing N N 150 ILE CG1 HG12 sing N N 151 ILE CG1 HG13 sing N N 152 ILE CG2 HG21 sing N N 153 ILE CG2 HG22 sing N N 154 ILE CG2 HG23 sing N N 155 ILE CD1 HD11 sing N N 156 ILE CD1 HD12 sing N N 157 ILE CD1 HD13 sing N N 158 ILE OXT HXT sing N N 159 LEU N CA sing N N 160 LEU N H sing N N 161 LEU N H2 sing N N 162 LEU CA C sing N N 163 LEU CA CB sing N N 164 LEU CA HA sing N N 165 LEU C O doub N N 166 LEU C OXT sing N N 167 LEU CB CG sing N N 168 LEU CB HB2 sing N N 169 LEU CB HB3 sing N N 170 LEU CG CD1 sing N N 171 LEU CG CD2 sing N N 172 LEU CG HG sing N N 173 LEU CD1 HD11 sing N N 174 LEU CD1 HD12 sing N N 175 LEU CD1 HD13 sing N N 176 LEU CD2 HD21 sing N N 177 LEU CD2 HD22 sing N N 178 LEU CD2 HD23 sing N N 179 LEU OXT HXT sing N N 180 LYS N CA sing N N 181 LYS N H sing N N 182 LYS N H2 sing N N 183 LYS CA C sing N N 184 LYS CA CB sing N N 185 LYS CA HA sing N N 186 LYS C O doub N N 187 LYS C OXT sing N N 188 LYS CB CG sing N N 189 LYS CB HB2 sing N N 190 LYS CB HB3 sing N N 191 LYS CG CD sing N N 192 LYS CG HG2 sing N N 193 LYS CG HG3 sing N N 194 LYS CD CE sing N N 195 LYS CD HD2 sing N N 196 LYS CD HD3 sing N N 197 LYS CE NZ sing N N 198 LYS CE HE2 sing N N 199 LYS CE HE3 sing N N 200 LYS NZ HZ1 sing N N 201 LYS NZ HZ2 sing N N 202 LYS NZ HZ3 sing N N 203 LYS OXT HXT sing N N 204 MET N CA sing N N 205 MET N H sing N N 206 MET N H2 sing N N 207 MET CA C sing N N 208 MET CA CB sing N N 209 MET CA HA sing N N 210 MET C O doub N N 211 MET C OXT sing N N 212 MET CB CG sing N N 213 MET CB HB2 sing N N 214 MET CB HB3 sing N N 215 MET CG SD sing N N 216 MET CG HG2 sing N N 217 MET CG HG3 sing N N 218 MET SD CE sing N N 219 MET CE HE1 sing N N 220 MET CE HE2 sing N N 221 MET CE HE3 sing N N 222 MET OXT HXT sing N N 223 PHE N CA sing N N 224 PHE N H sing N N 225 PHE N H2 sing N N 226 PHE CA C sing N N 227 PHE CA CB sing N N 228 PHE CA HA sing N N 229 PHE C O doub N N 230 PHE C OXT sing N N 231 PHE CB CG sing N N 232 PHE CB HB2 sing N N 233 PHE CB HB3 sing N N 234 PHE CG CD1 doub Y N 235 PHE CG CD2 sing Y N 236 PHE CD1 CE1 sing Y N 237 PHE CD1 HD1 sing N N 238 PHE CD2 CE2 doub Y N 239 PHE CD2 HD2 sing N N 240 PHE CE1 CZ doub Y N 241 PHE CE1 HE1 sing N N 242 PHE CE2 CZ sing Y N 243 PHE CE2 HE2 sing N N 244 PHE CZ HZ sing N N 245 PHE OXT HXT sing N N 246 PRO N CA sing N N 247 PRO N CD sing N N 248 PRO N H sing N N 249 PRO CA C sing N N 250 PRO CA CB sing N N 251 PRO CA HA sing N N 252 PRO C O doub N N 253 PRO C OXT sing N N 254 PRO CB CG sing N N 255 PRO CB HB2 sing N N 256 PRO CB HB3 sing N N 257 PRO CG CD sing N N 258 PRO CG HG2 sing N N 259 PRO CG HG3 sing N N 260 PRO CD HD2 sing N N 261 PRO CD HD3 sing N N 262 PRO OXT HXT sing N N 263 SER N CA sing N N 264 SER N H sing N N 265 SER N H2 sing N N 266 SER CA C sing N N 267 SER CA CB sing N N 268 SER CA HA sing N N 269 SER C O doub N N 270 SER C OXT sing N N 271 SER CB OG sing N N 272 SER CB HB2 sing N N 273 SER CB HB3 sing N N 274 SER OG HG sing N N 275 SER OXT HXT sing N N 276 THR N CA sing N N 277 THR N H sing N N 278 THR N H2 sing N N 279 THR CA C sing N N 280 THR CA CB sing N N 281 THR CA HA sing N N 282 THR C O doub N N 283 THR C OXT sing N N 284 THR CB OG1 sing N N 285 THR CB CG2 sing N N 286 THR CB HB sing N N 287 THR OG1 HG1 sing N N 288 THR CG2 HG21 sing N N 289 THR CG2 HG22 sing N N 290 THR CG2 HG23 sing N N 291 THR OXT HXT sing N N 292 TYR N CA sing N N 293 TYR N H sing N N 294 TYR N H2 sing N N 295 TYR CA C sing N N 296 TYR CA CB sing N N 297 TYR CA HA sing N N 298 TYR C O doub N N 299 TYR C OXT sing N N 300 TYR CB CG sing N N 301 TYR CB HB2 sing N N 302 TYR CB HB3 sing N N 303 TYR CG CD1 doub Y N 304 TYR CG CD2 sing Y N 305 TYR CD1 CE1 sing Y N 306 TYR CD1 HD1 sing N N 307 TYR CD2 CE2 doub Y N 308 TYR CD2 HD2 sing N N 309 TYR CE1 CZ doub Y N 310 TYR CE1 HE1 sing N N 311 TYR CE2 CZ sing Y N 312 TYR CE2 HE2 sing N N 313 TYR CZ OH sing N N 314 TYR OH HH sing N N 315 TYR OXT HXT sing N N 316 VAL N CA sing N N 317 VAL N H sing N N 318 VAL N H2 sing N N 319 VAL CA C sing N N 320 VAL CA CB sing N N 321 VAL CA HA sing N N 322 VAL C O doub N N 323 VAL C OXT sing N N 324 VAL CB CG1 sing N N 325 VAL CB CG2 sing N N 326 VAL CB HB sing N N 327 VAL CG1 HG11 sing N N 328 VAL CG1 HG12 sing N N 329 VAL CG1 HG13 sing N N 330 VAL CG2 HG21 sing N N 331 VAL CG2 HG22 sing N N 332 VAL CG2 HG23 sing N N 333 VAL OXT HXT sing N N 334 # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name Other _pdbx_initial_refinement_model.details 'Pb derivative structure' # _atom_sites.entry_id 1SMX _atom_sites.fract_transf_matrix[1][1] 0.014209 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014209 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011374 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O # loop_