data_1UMI # _entry.id 1UMI # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1UMI pdb_00001umi 10.2210/pdb1umi/pdb RCSB RCSB005991 ? ? WWPDB D_1000005991 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-04-06 2 'Structure model' 1 1 2009-01-19 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2019-11-06 5 'Structure model' 2 0 2020-07-29 6 'Structure model' 2 1 2021-11-10 7 'Structure model' 2 2 2023-12-27 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 5 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Non-polymer description' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' 7 5 'Structure model' 'Atomic model' 8 5 'Structure model' 'Data collection' 9 5 'Structure model' 'Derived calculations' 10 5 'Structure model' 'Structure summary' 11 6 'Structure model' 'Database references' 12 6 'Structure model' 'Derived calculations' 13 6 'Structure model' 'Structure summary' 14 7 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' citation 2 4 'Structure model' struct_conn 3 4 'Structure model' struct_ref_seq_dif 4 5 'Structure model' atom_site 5 5 'Structure model' chem_comp 6 5 'Structure model' entity 7 5 'Structure model' pdbx_branch_scheme 8 5 'Structure model' pdbx_chem_comp_identifier 9 5 'Structure model' pdbx_entity_branch 10 5 'Structure model' pdbx_entity_branch_descriptor 11 5 'Structure model' pdbx_entity_branch_link 12 5 'Structure model' pdbx_entity_branch_list 13 5 'Structure model' pdbx_entity_nonpoly 14 5 'Structure model' pdbx_nonpoly_scheme 15 5 'Structure model' pdbx_struct_assembly_gen 16 5 'Structure model' struct_asym 17 5 'Structure model' struct_conn 18 5 'Structure model' struct_site 19 5 'Structure model' struct_site_gen 20 6 'Structure model' chem_comp 21 6 'Structure model' database_2 22 6 'Structure model' struct_conn 23 6 'Structure model' struct_ref_seq_dif 24 7 'Structure model' chem_comp_atom 25 7 'Structure model' chem_comp_bond # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_citation.journal_abbrev' 2 4 'Structure model' '_citation.pdbx_database_id_DOI' 3 4 'Structure model' '_citation.title' 4 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 5 4 'Structure model' '_struct_ref_seq_dif.details' 6 5 'Structure model' '_atom_site.auth_asym_id' 7 5 'Structure model' '_atom_site.auth_atom_id' 8 5 'Structure model' '_atom_site.auth_seq_id' 9 5 'Structure model' '_atom_site.label_asym_id' 10 5 'Structure model' '_atom_site.label_atom_id' 11 5 'Structure model' '_atom_site.label_entity_id' 12 5 'Structure model' '_chem_comp.name' 13 5 'Structure model' '_chem_comp.type' 14 5 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 15 5 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 16 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 17 5 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 18 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 19 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 20 6 'Structure model' '_chem_comp.pdbx_synonyms' 21 6 'Structure model' '_database_2.pdbx_DOI' 22 6 'Structure model' '_database_2.pdbx_database_accession' 23 6 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 24 6 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1UMI _pdbx_database_status.recvd_initial_deposition_date 2003-10-01 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1UMH _pdbx_database_related.details '1UMH contains the same protein' _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Mizushima, T.' 1 'Hirao, T.' 2 'Yoshida, Y.' 3 'Lee, S.J.' 4 'Chiba, T.' 5 'Iwai, K.' 6 'Yamaguchi, Y.' 7 'Kato, K.' 8 'Tsukihara, T.' 9 'Tanaka, K.' 10 # _citation.id primary _citation.title 'Structural basis of sugar-recognizing ubiquitin ligase.' _citation.journal_abbrev Nat.Struct.Mol.Biol. _citation.journal_volume 11 _citation.page_first 365 _citation.page_last 370 _citation.year 2004 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1545-9993 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 14990996 _citation.pdbx_database_id_DOI 10.1038/nsmb732 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Mizushima, T.' 1 ? primary 'Hirao, T.' 2 ? primary 'Yoshida, Y.' 3 ? primary 'Lee, S.J.' 4 ? primary 'Chiba, T.' 5 ? primary 'Iwai, K.' 6 ? primary 'Yamaguchi, Y.' 7 ? primary 'Kato, K.' 8 ? primary 'Tsukihara, T.' 9 ? primary 'Tanaka, K.' 10 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'F-box only protein 2' 20988.945 1 6.3.2.19 C132A 'SBD DOMAIN' ? 2 branched man '2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose' 424.401 1 ? ? ? ? 3 water nat water 18.015 45 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name Fbs1 # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSHFYFLSKRRRNLLRNPAGEEDLEGWSDVEHGGDGWKVEELPGDNGVEFTQDDSVKKYFASSFEWCRKAQVIDLQAEGY WEELLDTTQPAIVVKDWYSGRTDAGSLYELTVRLLSENEDVLAEFATGQVAVPEDGSWMEISHTFIDYGPGVRFVRFEHG GQDSVYWKGWFGARVTNSSVWVEP ; _entity_poly.pdbx_seq_one_letter_code_can ;GSHFYFLSKRRRNLLRNPAGEEDLEGWSDVEHGGDGWKVEELPGDNGVEFTQDDSVKKYFASSFEWCRKAQVIDLQAEGY WEELLDTTQPAIVVKDWYSGRTDAGSLYELTVRLLSENEDVLAEFATGQVAVPEDGSWMEISHTFIDYGPGVRFVRFEHG GQDSVYWKGWFGARVTNSSVWVEP ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 PHE n 1 5 TYR n 1 6 PHE n 1 7 LEU n 1 8 SER n 1 9 LYS n 1 10 ARG n 1 11 ARG n 1 12 ARG n 1 13 ASN n 1 14 LEU n 1 15 LEU n 1 16 ARG n 1 17 ASN n 1 18 PRO n 1 19 ALA n 1 20 GLY n 1 21 GLU n 1 22 GLU n 1 23 ASP n 1 24 LEU n 1 25 GLU n 1 26 GLY n 1 27 TRP n 1 28 SER n 1 29 ASP n 1 30 VAL n 1 31 GLU n 1 32 HIS n 1 33 GLY n 1 34 GLY n 1 35 ASP n 1 36 GLY n 1 37 TRP n 1 38 LYS n 1 39 VAL n 1 40 GLU n 1 41 GLU n 1 42 LEU n 1 43 PRO n 1 44 GLY n 1 45 ASP n 1 46 ASN n 1 47 GLY n 1 48 VAL n 1 49 GLU n 1 50 PHE n 1 51 THR n 1 52 GLN n 1 53 ASP n 1 54 ASP n 1 55 SER n 1 56 VAL n 1 57 LYS n 1 58 LYS n 1 59 TYR n 1 60 PHE n 1 61 ALA n 1 62 SER n 1 63 SER n 1 64 PHE n 1 65 GLU n 1 66 TRP n 1 67 CYS n 1 68 ARG n 1 69 LYS n 1 70 ALA n 1 71 GLN n 1 72 VAL n 1 73 ILE n 1 74 ASP n 1 75 LEU n 1 76 GLN n 1 77 ALA n 1 78 GLU n 1 79 GLY n 1 80 TYR n 1 81 TRP n 1 82 GLU n 1 83 GLU n 1 84 LEU n 1 85 LEU n 1 86 ASP n 1 87 THR n 1 88 THR n 1 89 GLN n 1 90 PRO n 1 91 ALA n 1 92 ILE n 1 93 VAL n 1 94 VAL n 1 95 LYS n 1 96 ASP n 1 97 TRP n 1 98 TYR n 1 99 SER n 1 100 GLY n 1 101 ARG n 1 102 THR n 1 103 ASP n 1 104 ALA n 1 105 GLY n 1 106 SER n 1 107 LEU n 1 108 TYR n 1 109 GLU n 1 110 LEU n 1 111 THR n 1 112 VAL n 1 113 ARG n 1 114 LEU n 1 115 LEU n 1 116 SER n 1 117 GLU n 1 118 ASN n 1 119 GLU n 1 120 ASP n 1 121 VAL n 1 122 LEU n 1 123 ALA n 1 124 GLU n 1 125 PHE n 1 126 ALA n 1 127 THR n 1 128 GLY n 1 129 GLN n 1 130 VAL n 1 131 ALA n 1 132 VAL n 1 133 PRO n 1 134 GLU n 1 135 ASP n 1 136 GLY n 1 137 SER n 1 138 TRP n 1 139 MET n 1 140 GLU n 1 141 ILE n 1 142 SER n 1 143 HIS n 1 144 THR n 1 145 PHE n 1 146 ILE n 1 147 ASP n 1 148 TYR n 1 149 GLY n 1 150 PRO n 1 151 GLY n 1 152 VAL n 1 153 ARG n 1 154 PHE n 1 155 VAL n 1 156 ARG n 1 157 PHE n 1 158 GLU n 1 159 HIS n 1 160 GLY n 1 161 GLY n 1 162 GLN n 1 163 ASP n 1 164 SER n 1 165 VAL n 1 166 TYR n 1 167 TRP n 1 168 LYS n 1 169 GLY n 1 170 TRP n 1 171 PHE n 1 172 GLY n 1 173 ALA n 1 174 ARG n 1 175 VAL n 1 176 THR n 1 177 ASN n 1 178 SER n 1 179 SER n 1 180 VAL n 1 181 TRP n 1 182 VAL n 1 183 GLU n 1 184 PRO n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name mouse _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene mouse _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET15b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DGlcpNAcb1-4DGlcpNAca1-ROH 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/2,2,1/[a2122h-1a_1-5_2*NCC/3=O][a2122h-1b_1-5_2*NCC/3=O]/1-2/a4-b1' WURCS PDB2Glycan 1.1.0 3 2 '[][a-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.comp_id_1 NAG _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_2 NDG _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 NDG 'D-saccharide, alpha linking' . 2-acetamido-2-deoxy-alpha-D-glucopyranose ;N-acetyl-alpha-D-glucosamine; 2-acetamido-2-deoxy-alpha-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; 2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc NDG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAca NDG 'COMMON NAME' GMML 1.0 N-acetyl-a-D-glucopyranosamine NDG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-GlcpNAc NDG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 114 114 GLY GLY A . n A 1 2 SER 2 115 115 SER SER A . n A 1 3 HIS 3 116 116 HIS HIS A . n A 1 4 PHE 4 117 117 PHE PHE A . n A 1 5 TYR 5 118 118 TYR TYR A . n A 1 6 PHE 6 119 119 PHE PHE A . n A 1 7 LEU 7 120 120 LEU LEU A . n A 1 8 SER 8 121 121 SER SER A . n A 1 9 LYS 9 122 122 LYS LYS A . n A 1 10 ARG 10 123 123 ARG ARG A . n A 1 11 ARG 11 124 124 ARG ARG A . n A 1 12 ARG 12 125 125 ARG ARG A . n A 1 13 ASN 13 126 126 ASN ASN A . n A 1 14 LEU 14 127 127 LEU LEU A . n A 1 15 LEU 15 128 128 LEU LEU A . n A 1 16 ARG 16 129 129 ARG ARG A . n A 1 17 ASN 17 130 130 ASN ASN A . n A 1 18 PRO 18 131 131 PRO PRO A . n A 1 19 ALA 19 132 132 ALA ALA A . n A 1 20 GLY 20 133 133 GLY GLY A . n A 1 21 GLU 21 134 134 GLU GLU A . n A 1 22 GLU 22 135 135 GLU GLU A . n A 1 23 ASP 23 136 136 ASP ASP A . n A 1 24 LEU 24 137 137 LEU LEU A . n A 1 25 GLU 25 138 138 GLU GLU A . n A 1 26 GLY 26 139 139 GLY GLY A . n A 1 27 TRP 27 140 140 TRP TRP A . n A 1 28 SER 28 141 141 SER SER A . n A 1 29 ASP 29 142 142 ASP ASP A . n A 1 30 VAL 30 143 143 VAL VAL A . n A 1 31 GLU 31 144 144 GLU GLU A . n A 1 32 HIS 32 145 145 HIS HIS A . n A 1 33 GLY 33 146 146 GLY GLY A . n A 1 34 GLY 34 147 147 GLY GLY A . n A 1 35 ASP 35 148 148 ASP ASP A . n A 1 36 GLY 36 149 149 GLY GLY A . n A 1 37 TRP 37 150 150 TRP TRP A . n A 1 38 LYS 38 151 151 LYS LYS A . n A 1 39 VAL 39 152 152 VAL VAL A . n A 1 40 GLU 40 153 153 GLU GLU A . n A 1 41 GLU 41 154 154 GLU GLU A . n A 1 42 LEU 42 155 155 LEU LEU A . n A 1 43 PRO 43 156 156 PRO PRO A . n A 1 44 GLY 44 157 157 GLY GLY A . n A 1 45 ASP 45 158 158 ASP ASP A . n A 1 46 ASN 46 159 159 ASN ASN A . n A 1 47 GLY 47 160 160 GLY GLY A . n A 1 48 VAL 48 161 161 VAL VAL A . n A 1 49 GLU 49 162 162 GLU GLU A . n A 1 50 PHE 50 163 163 PHE PHE A . n A 1 51 THR 51 164 164 THR THR A . n A 1 52 GLN 52 165 165 GLN GLN A . n A 1 53 ASP 53 166 166 ASP ASP A . n A 1 54 ASP 54 167 167 ASP ASP A . n A 1 55 SER 55 168 168 SER SER A . n A 1 56 VAL 56 169 169 VAL VAL A . n A 1 57 LYS 57 170 170 LYS LYS A . n A 1 58 LYS 58 171 171 LYS LYS A . n A 1 59 TYR 59 172 172 TYR TYR A . n A 1 60 PHE 60 173 173 PHE PHE A . n A 1 61 ALA 61 174 174 ALA ALA A . n A 1 62 SER 62 175 175 SER SER A . n A 1 63 SER 63 176 176 SER SER A . n A 1 64 PHE 64 177 177 PHE PHE A . n A 1 65 GLU 65 178 178 GLU GLU A . n A 1 66 TRP 66 179 179 TRP TRP A . n A 1 67 CYS 67 180 180 CYS CYS A . n A 1 68 ARG 68 181 181 ARG ARG A . n A 1 69 LYS 69 182 182 LYS LYS A . n A 1 70 ALA 70 183 183 ALA ALA A . n A 1 71 GLN 71 184 184 GLN GLN A . n A 1 72 VAL 72 185 185 VAL VAL A . n A 1 73 ILE 73 186 186 ILE ILE A . n A 1 74 ASP 74 187 187 ASP ASP A . n A 1 75 LEU 75 188 188 LEU LEU A . n A 1 76 GLN 76 189 189 GLN GLN A . n A 1 77 ALA 77 190 190 ALA ALA A . n A 1 78 GLU 78 191 191 GLU GLU A . n A 1 79 GLY 79 192 192 GLY GLY A . n A 1 80 TYR 80 193 193 TYR TYR A . n A 1 81 TRP 81 194 194 TRP TRP A . n A 1 82 GLU 82 195 195 GLU GLU A . n A 1 83 GLU 83 196 196 GLU GLU A . n A 1 84 LEU 84 197 197 LEU LEU A . n A 1 85 LEU 85 198 198 LEU LEU A . n A 1 86 ASP 86 199 199 ASP ASP A . n A 1 87 THR 87 200 200 THR THR A . n A 1 88 THR 88 201 201 THR THR A . n A 1 89 GLN 89 202 202 GLN GLN A . n A 1 90 PRO 90 203 203 PRO PRO A . n A 1 91 ALA 91 204 204 ALA ALA A . n A 1 92 ILE 92 205 205 ILE ILE A . n A 1 93 VAL 93 206 206 VAL VAL A . n A 1 94 VAL 94 207 207 VAL VAL A . n A 1 95 LYS 95 208 208 LYS LYS A . n A 1 96 ASP 96 209 209 ASP ASP A . n A 1 97 TRP 97 210 210 TRP TRP A . n A 1 98 TYR 98 211 211 TYR TYR A . n A 1 99 SER 99 212 212 SER SER A . n A 1 100 GLY 100 213 213 GLY GLY A . n A 1 101 ARG 101 214 214 ARG ARG A . n A 1 102 THR 102 215 215 THR THR A . n A 1 103 ASP 103 216 216 ASP ASP A . n A 1 104 ALA 104 217 217 ALA ALA A . n A 1 105 GLY 105 218 218 GLY GLY A . n A 1 106 SER 106 219 219 SER SER A . n A 1 107 LEU 107 220 220 LEU LEU A . n A 1 108 TYR 108 221 221 TYR TYR A . n A 1 109 GLU 109 222 222 GLU GLU A . n A 1 110 LEU 110 223 223 LEU LEU A . n A 1 111 THR 111 224 224 THR THR A . n A 1 112 VAL 112 225 225 VAL VAL A . n A 1 113 ARG 113 226 226 ARG ARG A . n A 1 114 LEU 114 227 227 LEU LEU A . n A 1 115 LEU 115 228 228 LEU LEU A . n A 1 116 SER 116 229 229 SER SER A . n A 1 117 GLU 117 230 230 GLU GLU A . n A 1 118 ASN 118 231 231 ASN ASN A . n A 1 119 GLU 119 232 232 GLU GLU A . n A 1 120 ASP 120 233 233 ASP ASP A . n A 1 121 VAL 121 234 234 VAL VAL A . n A 1 122 LEU 122 235 235 LEU LEU A . n A 1 123 ALA 123 236 236 ALA ALA A . n A 1 124 GLU 124 237 237 GLU GLU A . n A 1 125 PHE 125 238 238 PHE PHE A . n A 1 126 ALA 126 239 239 ALA ALA A . n A 1 127 THR 127 240 240 THR THR A . n A 1 128 GLY 128 241 241 GLY GLY A . n A 1 129 GLN 129 242 242 GLN GLN A . n A 1 130 VAL 130 243 243 VAL VAL A . n A 1 131 ALA 131 244 244 ALA ALA A . n A 1 132 VAL 132 245 245 VAL VAL A . n A 1 133 PRO 133 246 246 PRO PRO A . n A 1 134 GLU 134 247 247 GLU GLU A . n A 1 135 ASP 135 248 248 ASP ASP A . n A 1 136 GLY 136 249 249 GLY GLY A . n A 1 137 SER 137 250 250 SER SER A . n A 1 138 TRP 138 251 251 TRP TRP A . n A 1 139 MET 139 252 252 MET MET A . n A 1 140 GLU 140 253 253 GLU GLU A . n A 1 141 ILE 141 254 254 ILE ILE A . n A 1 142 SER 142 255 255 SER SER A . n A 1 143 HIS 143 256 256 HIS HIS A . n A 1 144 THR 144 257 257 THR THR A . n A 1 145 PHE 145 258 258 PHE PHE A . n A 1 146 ILE 146 259 259 ILE ILE A . n A 1 147 ASP 147 260 260 ASP ASP A . n A 1 148 TYR 148 261 261 TYR TYR A . n A 1 149 GLY 149 262 262 GLY GLY A . n A 1 150 PRO 150 263 263 PRO PRO A . n A 1 151 GLY 151 264 264 GLY GLY A . n A 1 152 VAL 152 265 265 VAL VAL A . n A 1 153 ARG 153 266 266 ARG ARG A . n A 1 154 PHE 154 267 267 PHE PHE A . n A 1 155 VAL 155 268 268 VAL VAL A . n A 1 156 ARG 156 269 269 ARG ARG A . n A 1 157 PHE 157 270 270 PHE PHE A . n A 1 158 GLU 158 271 271 GLU GLU A . n A 1 159 HIS 159 272 272 HIS HIS A . n A 1 160 GLY 160 273 273 GLY GLY A . n A 1 161 GLY 161 274 274 GLY GLY A . n A 1 162 GLN 162 275 275 GLN GLN A . n A 1 163 ASP 163 276 276 ASP ASP A . n A 1 164 SER 164 277 277 SER SER A . n A 1 165 VAL 165 278 278 VAL VAL A . n A 1 166 TYR 166 279 279 TYR TYR A . n A 1 167 TRP 167 280 280 TRP TRP A . n A 1 168 LYS 168 281 281 LYS LYS A . n A 1 169 GLY 169 282 282 GLY GLY A . n A 1 170 TRP 170 283 283 TRP TRP A . n A 1 171 PHE 171 284 284 PHE PHE A . n A 1 172 GLY 172 285 285 GLY GLY A . n A 1 173 ALA 173 286 286 ALA ALA A . n A 1 174 ARG 174 287 287 ARG ARG A . n A 1 175 VAL 175 288 288 VAL VAL A . n A 1 176 THR 176 289 289 THR THR A . n A 1 177 ASN 177 290 290 ASN ASN A . n A 1 178 SER 178 291 291 SER SER A . n A 1 179 SER 179 292 292 SER SER A . n A 1 180 VAL 180 293 293 VAL VAL A . n A 1 181 TRP 181 294 294 TRP TRP A . n A 1 182 VAL 182 295 295 VAL VAL A . n A 1 183 GLU 183 296 296 GLU GLU A . n A 1 184 PRO 184 297 297 PRO PRO A . n # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 NDG 1 B NDG 1 A NDG 298 n B 2 NAG 2 B NAG 2 A NAG 299 n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HOH 1 1 1 HOH HOH A . C 3 HOH 2 2 2 HOH HOH A . C 3 HOH 3 3 3 HOH HOH A . C 3 HOH 4 4 4 HOH HOH A . C 3 HOH 5 5 5 HOH HOH A . C 3 HOH 6 6 6 HOH HOH A . C 3 HOH 7 7 7 HOH HOH A . C 3 HOH 8 8 8 HOH HOH A . C 3 HOH 9 9 9 HOH HOH A . C 3 HOH 10 10 10 HOH HOH A . C 3 HOH 11 11 11 HOH HOH A . C 3 HOH 12 12 12 HOH HOH A . C 3 HOH 13 13 13 HOH HOH A . C 3 HOH 14 14 14 HOH HOH A . C 3 HOH 15 15 15 HOH HOH A . C 3 HOH 16 16 16 HOH HOH A . C 3 HOH 17 17 17 HOH HOH A . C 3 HOH 18 18 18 HOH HOH A . C 3 HOH 19 19 19 HOH HOH A . C 3 HOH 20 20 20 HOH HOH A . C 3 HOH 21 21 21 HOH HOH A . C 3 HOH 22 22 22 HOH HOH A . C 3 HOH 23 23 23 HOH HOH A . C 3 HOH 24 24 24 HOH HOH A . C 3 HOH 25 25 25 HOH HOH A . C 3 HOH 26 26 26 HOH HOH A . C 3 HOH 27 27 27 HOH HOH A . C 3 HOH 28 28 28 HOH HOH A . C 3 HOH 29 29 29 HOH HOH A . C 3 HOH 30 30 30 HOH HOH A . C 3 HOH 31 31 31 HOH HOH A . C 3 HOH 32 32 32 HOH HOH A . C 3 HOH 33 33 33 HOH HOH A . C 3 HOH 34 34 34 HOH HOH A . C 3 HOH 35 35 35 HOH HOH A . C 3 HOH 36 36 36 HOH HOH A . C 3 HOH 37 37 37 HOH HOH A . C 3 HOH 38 38 38 HOH HOH A . C 3 HOH 39 39 39 HOH HOH A . C 3 HOH 40 40 40 HOH HOH A . C 3 HOH 41 41 41 HOH HOH A . C 3 HOH 42 42 42 HOH HOH A . C 3 HOH 43 43 43 HOH HOH A . C 3 HOH 44 44 44 HOH HOH A . C 3 HOH 45 45 45 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.1.24 ? 1 MOSFLM 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 AMoRE phasing . ? 4 # _cell.entry_id 1UMI _cell.length_a 63.806 _cell.length_b 63.806 _cell.length_c 147.780 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1UMI _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 # _exptl.entry_id 1UMI _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.58 _exptl_crystal.density_percent_sol 65.67 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details 'sodium chloride, ammonium sulphate, PIPES, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date 2002-12-05 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator MIRRORS _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type RIGAKU _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 1UMI _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 2.4 _reflns.d_resolution_low 58.72 _reflns.number_all 11950 _reflns.number_obs 11950 _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.085 _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 7.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.4 _reflns_shell.d_res_low 2.53 _reflns_shell.percent_possible_all 99.8 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.184 _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 7.2 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1UMI _refine.ls_number_reflns_obs 11950 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 58.72 _refine.ls_d_res_high 2.40 _refine.ls_percent_reflns_obs 99.70 _refine.ls_R_factor_obs 0.19968 _refine.ls_R_factor_all 0.19968 _refine.ls_R_factor_R_work 0.19693 _refine.ls_R_factor_R_free 0.2562 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.9 _refine.ls_number_reflns_R_free 611 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.936 _refine.correlation_coeff_Fo_to_Fc_free 0.907 _refine.B_iso_mean 35.120 _refine.aniso_B[1][1] -0.71 _refine.aniso_B[2][2] -0.71 _refine.aniso_B[3][3] 1.43 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.252 _refine.pdbx_overall_ESU_R_Free 0.226 _refine.overall_SU_ML 0.156 _refine.overall_SU_B 6.722 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1488 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 29 _refine_hist.number_atoms_solvent 45 _refine_hist.number_atoms_total 1562 _refine_hist.d_res_high 2.40 _refine_hist.d_res_low 58.72 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.043 0.021 ? 1562 'X-RAY DIFFRACTION' ? r_bond_other_d 0.002 0.020 ? 1312 'X-RAY DIFFRACTION' ? r_angle_refined_deg 3.319 1.934 ? 2124 'X-RAY DIFFRACTION' ? r_angle_other_deg 1.561 3.000 ? 3051 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 9.215 5.000 ? 183 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_chiral_restr 0.281 0.200 ? 217 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.019 0.020 ? 1781 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.003 0.020 ? 350 'X-RAY DIFFRACTION' ? r_nbd_refined 0.240 0.200 ? 260 'X-RAY DIFFRACTION' ? r_nbd_other 0.279 0.200 ? 1444 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other 0.110 0.200 ? 870 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.155 0.200 ? 44 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.429 0.200 ? 5 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.345 0.200 ? 32 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.151 0.200 ? 1 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.541 1.500 ? 907 'X-RAY DIFFRACTION' ? r_mcangle_it 2.657 2.000 ? 1450 'X-RAY DIFFRACTION' ? r_scbond_it 4.198 3.000 ? 655 'X-RAY DIFFRACTION' ? r_scangle_it 6.281 4.500 ? 674 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.400 _refine_ls_shell.d_res_low 2.462 _refine_ls_shell.number_reflns_R_work 847 _refine_ls_shell.R_factor_R_work 0.226 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.316 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 57 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _database_PDB_matrix.entry_id 1UMI _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1UMI _struct.title 'Structural basis of sugar-recognizing ubiquitin ligase' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1UMI _struct_keywords.pdbx_keywords LIGASE _struct_keywords.text 'UBIQUITIN, SCF, UBIQUITIN LIGASE, LECTIN, LIGASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name GB _struct_ref.db_code AAH46586 _struct_ref.pdbx_db_accession 28436805 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;FYFLSKRRRNLLRNPCGEEDLEGWSDVEHGGDGWRVEELPGDNGVEFTQDDSVKKYFASSFEWCRKAQVIDLQAEGYWEE LLDTTQPAIVVKDWYSGRTDAGSLYELTVRLLSENEDVLAEFATGQVAVPEDGSWMEISHTFIDYGPGVRFVRFEHGGQD SVYWKGWFGARVTNSSVWVEP ; _struct_ref.pdbx_align_begin 117 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1UMI _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 184 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 28436805 _struct_ref_seq.db_align_beg 117 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 297 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 117 _struct_ref_seq.pdbx_auth_seq_align_end 297 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1UMI GLY A 1 ? GB 28436805 ? ? 'cloning artifact' 114 1 1 1UMI SER A 2 ? GB 28436805 ? ? 'cloning artifact' 115 2 1 1UMI HIS A 3 ? GB 28436805 ? ? 'cloning artifact' 116 3 1 1UMI ALA A 19 ? GB 28436805 CYS 132 'engineered mutation' 132 4 1 1UMI LYS A 38 ? GB 28436805 ARG 151 'SEE REMARK 999' 151 5 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 HIS A 3 ? ARG A 11 ? HIS A 116 ARG A 124 1 ? 9 HELX_P HELX_P2 2 TRP A 81 ? THR A 88 ? TRP A 194 THR A 201 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id covale1 _struct_conn.conn_type_id covale _struct_conn.pdbx_leaving_atom_flag both _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_comp_id NDG _struct_conn.ptnr1_label_seq_id . _struct_conn.ptnr1_label_atom_id O4 _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_comp_id NAG _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_label_atom_id C1 _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id NDG _struct_conn.ptnr1_auth_seq_id 1 _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id NAG _struct_conn.ptnr2_auth_seq_id 2 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 1.433 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 5 ? C ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER A 28 ? HIS A 32 ? SER A 141 HIS A 145 A 2 CYS A 67 ? ASP A 74 ? CYS A 180 ASP A 187 A 3 PHE A 154 ? ASP A 163 ? PHE A 267 ASP A 276 A 4 SER A 106 ? LEU A 115 ? SER A 219 LEU A 228 A 5 VAL A 121 ? ALA A 126 ? VAL A 234 ALA A 239 B 1 SER A 28 ? HIS A 32 ? SER A 141 HIS A 145 B 2 CYS A 67 ? ASP A 74 ? CYS A 180 ASP A 187 B 3 PHE A 154 ? ASP A 163 ? PHE A 267 ASP A 276 B 4 SER A 106 ? LEU A 115 ? SER A 219 LEU A 228 B 5 VAL A 130 ? ALA A 131 ? VAL A 243 ALA A 244 C 1 LYS A 38 ? GLU A 41 ? LYS A 151 GLU A 154 C 2 LYS A 58 ? ALA A 61 ? LYS A 171 ALA A 174 C 3 ARG A 174 ? GLU A 183 ? ARG A 287 GLU A 296 C 4 ALA A 91 ? SER A 99 ? ALA A 204 SER A 212 C 5 MET A 139 ? PHE A 145 ? MET A 252 PHE A 258 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N SER A 28 ? N SER A 141 O ALA A 70 ? O ALA A 183 A 2 3 N GLN A 71 ? N GLN A 184 O PHE A 157 ? O PHE A 270 A 3 4 O PHE A 154 ? O PHE A 267 N LEU A 115 ? N LEU A 228 A 4 5 N LEU A 114 ? N LEU A 227 O LEU A 122 ? O LEU A 235 B 1 2 N SER A 28 ? N SER A 141 O ALA A 70 ? O ALA A 183 B 2 3 N GLN A 71 ? N GLN A 184 O PHE A 157 ? O PHE A 270 B 3 4 O PHE A 154 ? O PHE A 267 N LEU A 115 ? N LEU A 228 B 4 5 N TYR A 108 ? N TYR A 221 O VAL A 130 ? O VAL A 243 C 1 2 N LYS A 38 ? N LYS A 151 O ALA A 61 ? O ALA A 174 C 2 3 N PHE A 60 ? N PHE A 173 O VAL A 175 ? O VAL A 288 C 3 4 O ARG A 174 ? O ARG A 287 N SER A 99 ? N SER A 212 C 4 5 N VAL A 94 ? N VAL A 207 O HIS A 143 ? O HIS A 256 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 N A GLY 114 ? ? CA A GLY 114 ? ? 1.572 1.456 0.116 0.015 N 2 1 C A GLY 114 ? ? O A GLY 114 ? ? 1.118 1.232 -0.114 0.016 N 3 1 N A HIS 116 ? ? CA A HIS 116 ? ? 1.580 1.459 0.121 0.020 N 4 1 CG A PHE 119 ? ? CD1 A PHE 119 ? ? 1.482 1.383 0.099 0.015 N 5 1 CE1 A PHE 119 ? ? CZ A PHE 119 ? ? 1.485 1.369 0.116 0.019 N 6 1 CG A LYS 122 ? ? CD A LYS 122 ? ? 1.759 1.520 0.239 0.034 N 7 1 CD A LYS 122 ? ? CE A LYS 122 ? ? 1.680 1.508 0.172 0.025 N 8 1 CE A LYS 122 ? ? NZ A LYS 122 ? ? 1.662 1.486 0.176 0.025 N 9 1 NE A ARG 125 ? ? CZ A ARG 125 ? ? 1.420 1.326 0.094 0.013 N 10 1 CG A GLU 135 ? ? CD A GLU 135 ? ? 1.724 1.515 0.209 0.015 N 11 1 CD A GLU 135 ? ? OE1 A GLU 135 ? ? 1.318 1.252 0.066 0.011 N 12 1 CD A GLU 135 ? ? OE2 A GLU 135 ? ? 1.404 1.252 0.152 0.011 N 13 1 CG A GLU 162 ? ? CD A GLU 162 ? ? 1.633 1.515 0.118 0.015 N 14 1 CD A GLU 162 ? ? OE1 A GLU 162 ? ? 1.330 1.252 0.078 0.011 N 15 1 CB A SER 168 ? ? OG A SER 168 ? ? 1.339 1.418 -0.079 0.013 N 16 1 CB A VAL 169 ? ? CG2 A VAL 169 ? ? 1.651 1.524 0.127 0.021 N 17 1 CB A CYS 180 ? ? SG A CYS 180 ? ? 1.715 1.812 -0.097 0.016 N 18 1 CZ A ARG 181 ? ? NH1 A ARG 181 ? ? 1.419 1.326 0.093 0.013 N 19 1 CG A GLN 189 ? ? CD A GLN 189 ? ? 1.675 1.506 0.169 0.023 N 20 1 CE2 A TYR 193 ? ? CD2 A TYR 193 ? ? 1.498 1.389 0.109 0.015 N 21 1 CD A GLU 195 ? ? OE2 A GLU 195 ? ? 1.320 1.252 0.068 0.011 N 22 1 CB A VAL 207 ? ? CG1 A VAL 207 ? ? 1.307 1.524 -0.217 0.021 N 23 1 CE3 A TRP 210 ? ? CZ3 A TRP 210 ? ? 1.497 1.380 0.117 0.017 N 24 1 CE2 A TYR 211 ? ? CD2 A TYR 211 ? ? 1.502 1.389 0.113 0.015 N 25 1 CB A GLU 230 ? ? CG A GLU 230 ? ? 1.654 1.517 0.137 0.019 N 26 1 CG A GLU 230 ? ? CD A GLU 230 ? ? 1.708 1.515 0.193 0.015 N 27 1 CD A GLU 230 ? ? OE2 A GLU 230 ? ? 1.328 1.252 0.076 0.011 N 28 1 CB A GLN 242 ? ? CG A GLN 242 ? ? 1.747 1.521 0.226 0.027 N 29 1 CG A GLN 242 ? ? CD A GLN 242 ? ? 1.733 1.506 0.227 0.023 N 30 1 CB A SER 277 ? ? OG A SER 277 ? ? 1.324 1.418 -0.094 0.013 N 31 1 CE2 A TYR 279 ? ? CD2 A TYR 279 ? ? 1.543 1.389 0.154 0.015 N 32 1 CE3 A TRP 280 ? ? CZ3 A TRP 280 ? ? 1.485 1.380 0.105 0.017 N 33 1 CB A LYS 281 ? ? CG A LYS 281 ? ? 1.835 1.521 0.314 0.027 N 34 1 CD A LYS 281 ? ? CE A LYS 281 ? ? 1.721 1.508 0.213 0.025 N 35 1 CE A LYS 281 ? ? NZ A LYS 281 ? ? 1.821 1.486 0.335 0.025 N 36 1 CD A GLU 296 ? ? OE1 A GLU 296 ? ? 1.349 1.252 0.097 0.011 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 N A HIS 116 ? ? CA A HIS 116 ? ? C A HIS 116 ? ? 130.77 111.00 19.77 2.70 N 2 1 CA A LYS 122 ? ? CB A LYS 122 ? ? CG A LYS 122 ? ? 129.56 113.40 16.16 2.20 N 3 1 CD A LYS 122 ? ? CE A LYS 122 ? ? NZ A LYS 122 ? ? 125.65 111.70 13.95 2.30 N 4 1 NE A ARG 125 ? ? CZ A ARG 125 ? ? NH1 A ARG 125 ? ? 128.05 120.30 7.75 0.50 N 5 1 NE A ARG 125 ? ? CZ A ARG 125 ? ? NH2 A ARG 125 ? ? 117.02 120.30 -3.28 0.50 N 6 1 OE1 A GLU 135 ? ? CD A GLU 135 ? ? OE2 A GLU 135 ? ? 114.86 123.30 -8.44 1.20 N 7 1 N A LEU 155 ? ? CA A LEU 155 ? ? C A LEU 155 ? ? 132.92 111.00 21.92 2.70 N 8 1 CA A LEU 155 ? ? C A LEU 155 ? ? O A LEU 155 ? ? 103.90 120.10 -16.20 2.10 N 9 1 CA A LEU 155 ? ? C A LEU 155 ? ? N A PRO 156 ? ? 147.63 117.10 30.53 2.80 Y 10 1 O A LEU 155 ? ? C A LEU 155 ? ? N A PRO 156 ? ? 108.18 121.10 -12.92 1.90 Y 11 1 C A LEU 155 ? ? N A PRO 156 ? ? CA A PRO 156 ? ? 92.18 119.30 -27.12 1.50 Y 12 1 C A LEU 155 ? ? N A PRO 156 ? ? CD A PRO 156 ? ? 151.03 128.40 22.63 2.10 Y 13 1 CB A ASP 158 ? ? CG A ASP 158 ? ? OD1 A ASP 158 ? ? 111.93 118.30 -6.37 0.90 N 14 1 CB A ASP 158 ? ? CG A ASP 158 ? ? OD2 A ASP 158 ? ? 125.35 118.30 7.05 0.90 N 15 1 CB A ASP 166 ? ? CG A ASP 166 ? ? OD2 A ASP 166 ? ? 125.61 118.30 7.31 0.90 N 16 1 NE A ARG 181 ? ? CZ A ARG 181 ? ? NH1 A ARG 181 ? ? 123.70 120.30 3.40 0.50 N 17 1 NE A ARG 181 ? ? CZ A ARG 181 ? ? NH2 A ARG 181 ? ? 115.13 120.30 -5.17 0.50 N 18 1 CA A GLU 195 ? ? CB A GLU 195 ? ? CG A GLU 195 ? ? 128.09 113.40 14.69 2.20 N 19 1 CB A ASP 199 ? ? CG A ASP 199 ? ? OD1 A ASP 199 ? ? 124.10 118.30 5.80 0.90 N 20 1 CB A ASP 216 ? ? CG A ASP 216 ? ? OD1 A ASP 216 ? ? 125.06 118.30 6.76 0.90 N 21 1 CB A ASP 233 ? ? CG A ASP 233 ? ? OD1 A ASP 233 ? ? 112.03 118.30 -6.27 0.90 N 22 1 CB A ASP 233 ? ? CG A ASP 233 ? ? OD2 A ASP 233 ? ? 125.32 118.30 7.02 0.90 N 23 1 CB A ASP 248 ? ? CG A ASP 248 ? ? OD1 A ASP 248 ? ? 125.33 118.30 7.03 0.90 N 24 1 CG A MET 252 ? ? SD A MET 252 ? ? CE A MET 252 ? ? 111.87 100.20 11.67 1.60 N 25 1 NE A ARG 269 ? ? CZ A ARG 269 ? ? NH1 A ARG 269 ? ? 116.99 120.30 -3.31 0.50 N 26 1 CB A ASP 276 ? ? CG A ASP 276 ? ? OD1 A ASP 276 ? ? 123.75 118.30 5.45 0.90 N 27 1 CD A LYS 281 ? ? CE A LYS 281 ? ? NZ A LYS 281 ? ? 126.60 111.70 14.90 2.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 116 ? ? 121.76 -69.41 2 1 ASP A 136 ? ? 55.50 -121.14 3 1 ASN A 159 ? ? 30.74 48.48 4 1 GLN A 165 ? ? -179.97 -46.36 5 1 ASP A 167 ? ? -43.51 -17.27 6 1 SER A 176 ? ? -119.90 -144.53 7 1 THR A 200 ? ? -94.88 -68.77 8 1 ALA A 217 ? ? -174.67 146.80 9 1 TRP A 283 ? ? -119.12 75.26 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 1 SER A 115 ? ? HIS A 116 ? ? -37.72 2 1 HIS A 116 ? ? PHE A 117 ? ? 146.69 3 1 LEU A 155 ? ? PRO A 156 ? ? 144.88 # _pdbx_entry_details.entry_id 1UMI _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THERE IS A DIFFERENCE BETWEEN THE SEQRES AND THE SEQUENCE DATABASE. THE DEPOSITORS BELIEVE THAT THIS RESIDUE IS VALIANT AT THIS POSITION. ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 NAG C1 C N R 250 NAG C2 C N R 251 NAG C3 C N R 252 NAG C4 C N S 253 NAG C5 C N R 254 NAG C6 C N N 255 NAG C7 C N N 256 NAG C8 C N N 257 NAG N2 N N N 258 NAG O1 O N N 259 NAG O3 O N N 260 NAG O4 O N N 261 NAG O5 O N N 262 NAG O6 O N N 263 NAG O7 O N N 264 NAG H1 H N N 265 NAG H2 H N N 266 NAG H3 H N N 267 NAG H4 H N N 268 NAG H5 H N N 269 NAG H61 H N N 270 NAG H62 H N N 271 NAG H81 H N N 272 NAG H82 H N N 273 NAG H83 H N N 274 NAG HN2 H N N 275 NAG HO1 H N N 276 NAG HO3 H N N 277 NAG HO4 H N N 278 NAG HO6 H N N 279 NDG C1 C N S 280 NDG C2 C N R 281 NDG C3 C N R 282 NDG C4 C N S 283 NDG C5 C N R 284 NDG C6 C N N 285 NDG C7 C N N 286 NDG C8 C N N 287 NDG O5 O N N 288 NDG O3 O N N 289 NDG O4 O N N 290 NDG O6 O N N 291 NDG O7 O N N 292 NDG N2 N N N 293 NDG O1 O N N 294 NDG H1 H N N 295 NDG H2 H N N 296 NDG H3 H N N 297 NDG H4 H N N 298 NDG H5 H N N 299 NDG H61 H N N 300 NDG H62 H N N 301 NDG H81 H N N 302 NDG H82 H N N 303 NDG H83 H N N 304 NDG HO3 H N N 305 NDG HO4 H N N 306 NDG HO6 H N N 307 NDG HN2 H N N 308 NDG HO1 H N N 309 PHE N N N N 310 PHE CA C N S 311 PHE C C N N 312 PHE O O N N 313 PHE CB C N N 314 PHE CG C Y N 315 PHE CD1 C Y N 316 PHE CD2 C Y N 317 PHE CE1 C Y N 318 PHE CE2 C Y N 319 PHE CZ C Y N 320 PHE OXT O N N 321 PHE H H N N 322 PHE H2 H N N 323 PHE HA H N N 324 PHE HB2 H N N 325 PHE HB3 H N N 326 PHE HD1 H N N 327 PHE HD2 H N N 328 PHE HE1 H N N 329 PHE HE2 H N N 330 PHE HZ H N N 331 PHE HXT H N N 332 PRO N N N N 333 PRO CA C N S 334 PRO C C N N 335 PRO O O N N 336 PRO CB C N N 337 PRO CG C N N 338 PRO CD C N N 339 PRO OXT O N N 340 PRO H H N N 341 PRO HA H N N 342 PRO HB2 H N N 343 PRO HB3 H N N 344 PRO HG2 H N N 345 PRO HG3 H N N 346 PRO HD2 H N N 347 PRO HD3 H N N 348 PRO HXT H N N 349 SER N N N N 350 SER CA C N S 351 SER C C N N 352 SER O O N N 353 SER CB C N N 354 SER OG O N N 355 SER OXT O N N 356 SER H H N N 357 SER H2 H N N 358 SER HA H N N 359 SER HB2 H N N 360 SER HB3 H N N 361 SER HG H N N 362 SER HXT H N N 363 THR N N N N 364 THR CA C N S 365 THR C C N N 366 THR O O N N 367 THR CB C N R 368 THR OG1 O N N 369 THR CG2 C N N 370 THR OXT O N N 371 THR H H N N 372 THR H2 H N N 373 THR HA H N N 374 THR HB H N N 375 THR HG1 H N N 376 THR HG21 H N N 377 THR HG22 H N N 378 THR HG23 H N N 379 THR HXT H N N 380 TRP N N N N 381 TRP CA C N S 382 TRP C C N N 383 TRP O O N N 384 TRP CB C N N 385 TRP CG C Y N 386 TRP CD1 C Y N 387 TRP CD2 C Y N 388 TRP NE1 N Y N 389 TRP CE2 C Y N 390 TRP CE3 C Y N 391 TRP CZ2 C Y N 392 TRP CZ3 C Y N 393 TRP CH2 C Y N 394 TRP OXT O N N 395 TRP H H N N 396 TRP H2 H N N 397 TRP HA H N N 398 TRP HB2 H N N 399 TRP HB3 H N N 400 TRP HD1 H N N 401 TRP HE1 H N N 402 TRP HE3 H N N 403 TRP HZ2 H N N 404 TRP HZ3 H N N 405 TRP HH2 H N N 406 TRP HXT H N N 407 TYR N N N N 408 TYR CA C N S 409 TYR C C N N 410 TYR O O N N 411 TYR CB C N N 412 TYR CG C Y N 413 TYR CD1 C Y N 414 TYR CD2 C Y N 415 TYR CE1 C Y N 416 TYR CE2 C Y N 417 TYR CZ C Y N 418 TYR OH O N N 419 TYR OXT O N N 420 TYR H H N N 421 TYR H2 H N N 422 TYR HA H N N 423 TYR HB2 H N N 424 TYR HB3 H N N 425 TYR HD1 H N N 426 TYR HD2 H N N 427 TYR HE1 H N N 428 TYR HE2 H N N 429 TYR HH H N N 430 TYR HXT H N N 431 VAL N N N N 432 VAL CA C N S 433 VAL C C N N 434 VAL O O N N 435 VAL CB C N N 436 VAL CG1 C N N 437 VAL CG2 C N N 438 VAL OXT O N N 439 VAL H H N N 440 VAL H2 H N N 441 VAL HA H N N 442 VAL HB H N N 443 VAL HG11 H N N 444 VAL HG12 H N N 445 VAL HG13 H N N 446 VAL HG21 H N N 447 VAL HG22 H N N 448 VAL HG23 H N N 449 VAL HXT H N N 450 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 NAG C1 C2 sing N N 237 NAG C1 O1 sing N N 238 NAG C1 O5 sing N N 239 NAG C1 H1 sing N N 240 NAG C2 C3 sing N N 241 NAG C2 N2 sing N N 242 NAG C2 H2 sing N N 243 NAG C3 C4 sing N N 244 NAG C3 O3 sing N N 245 NAG C3 H3 sing N N 246 NAG C4 C5 sing N N 247 NAG C4 O4 sing N N 248 NAG C4 H4 sing N N 249 NAG C5 C6 sing N N 250 NAG C5 O5 sing N N 251 NAG C5 H5 sing N N 252 NAG C6 O6 sing N N 253 NAG C6 H61 sing N N 254 NAG C6 H62 sing N N 255 NAG C7 C8 sing N N 256 NAG C7 N2 sing N N 257 NAG C7 O7 doub N N 258 NAG C8 H81 sing N N 259 NAG C8 H82 sing N N 260 NAG C8 H83 sing N N 261 NAG N2 HN2 sing N N 262 NAG O1 HO1 sing N N 263 NAG O3 HO3 sing N N 264 NAG O4 HO4 sing N N 265 NAG O6 HO6 sing N N 266 NDG C1 C2 sing N N 267 NDG C1 O5 sing N N 268 NDG C1 O1 sing N N 269 NDG C1 H1 sing N N 270 NDG C2 C3 sing N N 271 NDG C2 N2 sing N N 272 NDG C2 H2 sing N N 273 NDG C3 C4 sing N N 274 NDG C3 O3 sing N N 275 NDG C3 H3 sing N N 276 NDG C4 C5 sing N N 277 NDG C4 O4 sing N N 278 NDG C4 H4 sing N N 279 NDG C5 C6 sing N N 280 NDG C5 O5 sing N N 281 NDG C5 H5 sing N N 282 NDG C6 O6 sing N N 283 NDG C6 H61 sing N N 284 NDG C6 H62 sing N N 285 NDG C7 C8 sing N N 286 NDG C7 O7 doub N N 287 NDG C7 N2 sing N N 288 NDG C8 H81 sing N N 289 NDG C8 H82 sing N N 290 NDG C8 H83 sing N N 291 NDG O3 HO3 sing N N 292 NDG O4 HO4 sing N N 293 NDG O6 HO6 sing N N 294 NDG N2 HN2 sing N N 295 NDG O1 HO1 sing N N 296 PHE N CA sing N N 297 PHE N H sing N N 298 PHE N H2 sing N N 299 PHE CA C sing N N 300 PHE CA CB sing N N 301 PHE CA HA sing N N 302 PHE C O doub N N 303 PHE C OXT sing N N 304 PHE CB CG sing N N 305 PHE CB HB2 sing N N 306 PHE CB HB3 sing N N 307 PHE CG CD1 doub Y N 308 PHE CG CD2 sing Y N 309 PHE CD1 CE1 sing Y N 310 PHE CD1 HD1 sing N N 311 PHE CD2 CE2 doub Y N 312 PHE CD2 HD2 sing N N 313 PHE CE1 CZ doub Y N 314 PHE CE1 HE1 sing N N 315 PHE CE2 CZ sing Y N 316 PHE CE2 HE2 sing N N 317 PHE CZ HZ sing N N 318 PHE OXT HXT sing N N 319 PRO N CA sing N N 320 PRO N CD sing N N 321 PRO N H sing N N 322 PRO CA C sing N N 323 PRO CA CB sing N N 324 PRO CA HA sing N N 325 PRO C O doub N N 326 PRO C OXT sing N N 327 PRO CB CG sing N N 328 PRO CB HB2 sing N N 329 PRO CB HB3 sing N N 330 PRO CG CD sing N N 331 PRO CG HG2 sing N N 332 PRO CG HG3 sing N N 333 PRO CD HD2 sing N N 334 PRO CD HD3 sing N N 335 PRO OXT HXT sing N N 336 SER N CA sing N N 337 SER N H sing N N 338 SER N H2 sing N N 339 SER CA C sing N N 340 SER CA CB sing N N 341 SER CA HA sing N N 342 SER C O doub N N 343 SER C OXT sing N N 344 SER CB OG sing N N 345 SER CB HB2 sing N N 346 SER CB HB3 sing N N 347 SER OG HG sing N N 348 SER OXT HXT sing N N 349 THR N CA sing N N 350 THR N H sing N N 351 THR N H2 sing N N 352 THR CA C sing N N 353 THR CA CB sing N N 354 THR CA HA sing N N 355 THR C O doub N N 356 THR C OXT sing N N 357 THR CB OG1 sing N N 358 THR CB CG2 sing N N 359 THR CB HB sing N N 360 THR OG1 HG1 sing N N 361 THR CG2 HG21 sing N N 362 THR CG2 HG22 sing N N 363 THR CG2 HG23 sing N N 364 THR OXT HXT sing N N 365 TRP N CA sing N N 366 TRP N H sing N N 367 TRP N H2 sing N N 368 TRP CA C sing N N 369 TRP CA CB sing N N 370 TRP CA HA sing N N 371 TRP C O doub N N 372 TRP C OXT sing N N 373 TRP CB CG sing N N 374 TRP CB HB2 sing N N 375 TRP CB HB3 sing N N 376 TRP CG CD1 doub Y N 377 TRP CG CD2 sing Y N 378 TRP CD1 NE1 sing Y N 379 TRP CD1 HD1 sing N N 380 TRP CD2 CE2 doub Y N 381 TRP CD2 CE3 sing Y N 382 TRP NE1 CE2 sing Y N 383 TRP NE1 HE1 sing N N 384 TRP CE2 CZ2 sing Y N 385 TRP CE3 CZ3 doub Y N 386 TRP CE3 HE3 sing N N 387 TRP CZ2 CH2 doub Y N 388 TRP CZ2 HZ2 sing N N 389 TRP CZ3 CH2 sing Y N 390 TRP CZ3 HZ3 sing N N 391 TRP CH2 HH2 sing N N 392 TRP OXT HXT sing N N 393 TYR N CA sing N N 394 TYR N H sing N N 395 TYR N H2 sing N N 396 TYR CA C sing N N 397 TYR CA CB sing N N 398 TYR CA HA sing N N 399 TYR C O doub N N 400 TYR C OXT sing N N 401 TYR CB CG sing N N 402 TYR CB HB2 sing N N 403 TYR CB HB3 sing N N 404 TYR CG CD1 doub Y N 405 TYR CG CD2 sing Y N 406 TYR CD1 CE1 sing Y N 407 TYR CD1 HD1 sing N N 408 TYR CD2 CE2 doub Y N 409 TYR CD2 HD2 sing N N 410 TYR CE1 CZ doub Y N 411 TYR CE1 HE1 sing N N 412 TYR CE2 CZ sing Y N 413 TYR CE2 HE2 sing N N 414 TYR CZ OH sing N N 415 TYR OH HH sing N N 416 TYR OXT HXT sing N N 417 VAL N CA sing N N 418 VAL N H sing N N 419 VAL N H2 sing N N 420 VAL CA C sing N N 421 VAL CA CB sing N N 422 VAL CA HA sing N N 423 VAL C O doub N N 424 VAL C OXT sing N N 425 VAL CB CG1 sing N N 426 VAL CB CG2 sing N N 427 VAL CB HB sing N N 428 VAL CG1 HG11 sing N N 429 VAL CG1 HG12 sing N N 430 VAL CG1 HG13 sing N N 431 VAL CG2 HG21 sing N N 432 VAL CG2 HG22 sing N N 433 VAL CG2 HG23 sing N N 434 VAL OXT HXT sing N N 435 # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 NDG 1 n 2 NAG 2 n # _atom_sites.entry_id 1UMI _atom_sites.fract_transf_matrix[1][1] 0.015673 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015673 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006767 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_