data_1VJT # _entry.id 1VJT # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1VJT pdb_00001vjt 10.2210/pdb1vjt/pdb RCSB RCSB001929 ? ? WWPDB D_1000001929 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 282622 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 1VJT _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2004-03-22 _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of Alpha-glucosidase (TM0752) from Thermotoga maritima at 2.50 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.length_a 75.722 _cell.length_b 79.815 _cell.length_c 89.222 _cell.angle_alpha 90.00 _cell.angle_beta 101.99 _cell.angle_gamma 90.00 _cell.entry_id 1VJT _cell.pdbx_unique_axis ? _cell.Z_PDB 4 # _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.entry_id 1VJT _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 5 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man alpha-glucosidase 57599.273 1 3.2.1.139 ? ? ? 2 non-polymer syn NICOTINAMIDE-ADENINE-DINUCLEOTIDE 663.425 1 ? ? ? ? 3 water nat water 18.015 48 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;MGSDKIHHHHHH(MSE)KISIIGAGSVRFALQLVGDIAQTEELSREDTHIY(MSE)(MSE)DVHERRLNASYILARKYVE ELNSPVKIVKTSSLDEAIDGADFIINTAYPYDPRYHDSGSQRWDEVTKVGEKHGYYRGIDSQELN(MSE)VSTYTYVLSS YPD(MSE)KLALEIAEK(MSE)KK(MSE)APKAYL(MSE)QTANPVFEITQAVRRWTGANIVGFCHGVAGVYEVFEKLDL DPEEVDWQVAGVNHGIWLNRFRYRGEDAYPLLDEWIEKKLPEWEPKNPWDTQ(MSE)SPAA(MSE)D(MSE)YKFYG (MSE)LPIGDTVRNGSWKYHYNLETKKKWFGKFGGIDNEVERPKFHEQLRRARERLIKLAEEVQQNPG(MSE)KLTEEHP EIFPKGKLSGEQHIPFINAIANNKRVRLFLNVENQGTLKDFPDDVV(MSE)ELPVWVDCCGIHREKVEPDLTHRIKIFYL WPRILR(MSE)EWNLEAYISRDRKVLEEILIRDPRTKSYEQIVQVLDEIFNLPFNEELRRYYKEKL ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSDKIHHHHHHMKISIIGAGSVRFALQLVGDIAQTEELSREDTHIYMMDVHERRLNASYILARKYVEELNSPVKIVKTS SLDEAIDGADFIINTAYPYDPRYHDSGSQRWDEVTKVGEKHGYYRGIDSQELNMVSTYTYVLSSYPDMKLALEIAEKMKK MAPKAYLMQTANPVFEITQAVRRWTGANIVGFCHGVAGVYEVFEKLDLDPEEVDWQVAGVNHGIWLNRFRYRGEDAYPLL DEWIEKKLPEWEPKNPWDTQMSPAAMDMYKFYGMLPIGDTVRNGSWKYHYNLETKKKWFGKFGGIDNEVERPKFHEQLRR ARERLIKLAEEVQQNPGMKLTEEHPEIFPKGKLSGEQHIPFINAIANNKRVRLFLNVENQGTLKDFPDDVVMELPVWVDC CGIHREKVEPDLTHRIKIFYLWPRILRMEWNLEAYISRDRKVLEEILIRDPRTKSYEQIVQVLDEIFNLPFNEELRRYYK EKL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 282622 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 SER n 1 4 ASP n 1 5 LYS n 1 6 ILE n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 HIS n 1 12 HIS n 1 13 MSE n 1 14 LYS n 1 15 ILE n 1 16 SER n 1 17 ILE n 1 18 ILE n 1 19 GLY n 1 20 ALA n 1 21 GLY n 1 22 SER n 1 23 VAL n 1 24 ARG n 1 25 PHE n 1 26 ALA n 1 27 LEU n 1 28 GLN n 1 29 LEU n 1 30 VAL n 1 31 GLY n 1 32 ASP n 1 33 ILE n 1 34 ALA n 1 35 GLN n 1 36 THR n 1 37 GLU n 1 38 GLU n 1 39 LEU n 1 40 SER n 1 41 ARG n 1 42 GLU n 1 43 ASP n 1 44 THR n 1 45 HIS n 1 46 ILE n 1 47 TYR n 1 48 MSE n 1 49 MSE n 1 50 ASP n 1 51 VAL n 1 52 HIS n 1 53 GLU n 1 54 ARG n 1 55 ARG n 1 56 LEU n 1 57 ASN n 1 58 ALA n 1 59 SER n 1 60 TYR n 1 61 ILE n 1 62 LEU n 1 63 ALA n 1 64 ARG n 1 65 LYS n 1 66 TYR n 1 67 VAL n 1 68 GLU n 1 69 GLU n 1 70 LEU n 1 71 ASN n 1 72 SER n 1 73 PRO n 1 74 VAL n 1 75 LYS n 1 76 ILE n 1 77 VAL n 1 78 LYS n 1 79 THR n 1 80 SER n 1 81 SER n 1 82 LEU n 1 83 ASP n 1 84 GLU n 1 85 ALA n 1 86 ILE n 1 87 ASP n 1 88 GLY n 1 89 ALA n 1 90 ASP n 1 91 PHE n 1 92 ILE n 1 93 ILE n 1 94 ASN n 1 95 THR n 1 96 ALA n 1 97 TYR n 1 98 PRO n 1 99 TYR n 1 100 ASP n 1 101 PRO n 1 102 ARG n 1 103 TYR n 1 104 HIS n 1 105 ASP n 1 106 SER n 1 107 GLY n 1 108 SER n 1 109 GLN n 1 110 ARG n 1 111 TRP n 1 112 ASP n 1 113 GLU n 1 114 VAL n 1 115 THR n 1 116 LYS n 1 117 VAL n 1 118 GLY n 1 119 GLU n 1 120 LYS n 1 121 HIS n 1 122 GLY n 1 123 TYR n 1 124 TYR n 1 125 ARG n 1 126 GLY n 1 127 ILE n 1 128 ASP n 1 129 SER n 1 130 GLN n 1 131 GLU n 1 132 LEU n 1 133 ASN n 1 134 MSE n 1 135 VAL n 1 136 SER n 1 137 THR n 1 138 TYR n 1 139 THR n 1 140 TYR n 1 141 VAL n 1 142 LEU n 1 143 SER n 1 144 SER n 1 145 TYR n 1 146 PRO n 1 147 ASP n 1 148 MSE n 1 149 LYS n 1 150 LEU n 1 151 ALA n 1 152 LEU n 1 153 GLU n 1 154 ILE n 1 155 ALA n 1 156 GLU n 1 157 LYS n 1 158 MSE n 1 159 LYS n 1 160 LYS n 1 161 MSE n 1 162 ALA n 1 163 PRO n 1 164 LYS n 1 165 ALA n 1 166 TYR n 1 167 LEU n 1 168 MSE n 1 169 GLN n 1 170 THR n 1 171 ALA n 1 172 ASN n 1 173 PRO n 1 174 VAL n 1 175 PHE n 1 176 GLU n 1 177 ILE n 1 178 THR n 1 179 GLN n 1 180 ALA n 1 181 VAL n 1 182 ARG n 1 183 ARG n 1 184 TRP n 1 185 THR n 1 186 GLY n 1 187 ALA n 1 188 ASN n 1 189 ILE n 1 190 VAL n 1 191 GLY n 1 192 PHE n 1 193 CYS n 1 194 HIS n 1 195 GLY n 1 196 VAL n 1 197 ALA n 1 198 GLY n 1 199 VAL n 1 200 TYR n 1 201 GLU n 1 202 VAL n 1 203 PHE n 1 204 GLU n 1 205 LYS n 1 206 LEU n 1 207 ASP n 1 208 LEU n 1 209 ASP n 1 210 PRO n 1 211 GLU n 1 212 GLU n 1 213 VAL n 1 214 ASP n 1 215 TRP n 1 216 GLN n 1 217 VAL n 1 218 ALA n 1 219 GLY n 1 220 VAL n 1 221 ASN n 1 222 HIS n 1 223 GLY n 1 224 ILE n 1 225 TRP n 1 226 LEU n 1 227 ASN n 1 228 ARG n 1 229 PHE n 1 230 ARG n 1 231 TYR n 1 232 ARG n 1 233 GLY n 1 234 GLU n 1 235 ASP n 1 236 ALA n 1 237 TYR n 1 238 PRO n 1 239 LEU n 1 240 LEU n 1 241 ASP n 1 242 GLU n 1 243 TRP n 1 244 ILE n 1 245 GLU n 1 246 LYS n 1 247 LYS n 1 248 LEU n 1 249 PRO n 1 250 GLU n 1 251 TRP n 1 252 GLU n 1 253 PRO n 1 254 LYS n 1 255 ASN n 1 256 PRO n 1 257 TRP n 1 258 ASP n 1 259 THR n 1 260 GLN n 1 261 MSE n 1 262 SER n 1 263 PRO n 1 264 ALA n 1 265 ALA n 1 266 MSE n 1 267 ASP n 1 268 MSE n 1 269 TYR n 1 270 LYS n 1 271 PHE n 1 272 TYR n 1 273 GLY n 1 274 MSE n 1 275 LEU n 1 276 PRO n 1 277 ILE n 1 278 GLY n 1 279 ASP n 1 280 THR n 1 281 VAL n 1 282 ARG n 1 283 ASN n 1 284 GLY n 1 285 SER n 1 286 TRP n 1 287 LYS n 1 288 TYR n 1 289 HIS n 1 290 TYR n 1 291 ASN n 1 292 LEU n 1 293 GLU n 1 294 THR n 1 295 LYS n 1 296 LYS n 1 297 LYS n 1 298 TRP n 1 299 PHE n 1 300 GLY n 1 301 LYS n 1 302 PHE n 1 303 GLY n 1 304 GLY n 1 305 ILE n 1 306 ASP n 1 307 ASN n 1 308 GLU n 1 309 VAL n 1 310 GLU n 1 311 ARG n 1 312 PRO n 1 313 LYS n 1 314 PHE n 1 315 HIS n 1 316 GLU n 1 317 GLN n 1 318 LEU n 1 319 ARG n 1 320 ARG n 1 321 ALA n 1 322 ARG n 1 323 GLU n 1 324 ARG n 1 325 LEU n 1 326 ILE n 1 327 LYS n 1 328 LEU n 1 329 ALA n 1 330 GLU n 1 331 GLU n 1 332 VAL n 1 333 GLN n 1 334 GLN n 1 335 ASN n 1 336 PRO n 1 337 GLY n 1 338 MSE n 1 339 LYS n 1 340 LEU n 1 341 THR n 1 342 GLU n 1 343 GLU n 1 344 HIS n 1 345 PRO n 1 346 GLU n 1 347 ILE n 1 348 PHE n 1 349 PRO n 1 350 LYS n 1 351 GLY n 1 352 LYS n 1 353 LEU n 1 354 SER n 1 355 GLY n 1 356 GLU n 1 357 GLN n 1 358 HIS n 1 359 ILE n 1 360 PRO n 1 361 PHE n 1 362 ILE n 1 363 ASN n 1 364 ALA n 1 365 ILE n 1 366 ALA n 1 367 ASN n 1 368 ASN n 1 369 LYS n 1 370 ARG n 1 371 VAL n 1 372 ARG n 1 373 LEU n 1 374 PHE n 1 375 LEU n 1 376 ASN n 1 377 VAL n 1 378 GLU n 1 379 ASN n 1 380 GLN n 1 381 GLY n 1 382 THR n 1 383 LEU n 1 384 LYS n 1 385 ASP n 1 386 PHE n 1 387 PRO n 1 388 ASP n 1 389 ASP n 1 390 VAL n 1 391 VAL n 1 392 MSE n 1 393 GLU n 1 394 LEU n 1 395 PRO n 1 396 VAL n 1 397 TRP n 1 398 VAL n 1 399 ASP n 1 400 CYS n 1 401 CYS n 1 402 GLY n 1 403 ILE n 1 404 HIS n 1 405 ARG n 1 406 GLU n 1 407 LYS n 1 408 VAL n 1 409 GLU n 1 410 PRO n 1 411 ASP n 1 412 LEU n 1 413 THR n 1 414 HIS n 1 415 ARG n 1 416 ILE n 1 417 LYS n 1 418 ILE n 1 419 PHE n 1 420 TYR n 1 421 LEU n 1 422 TRP n 1 423 PRO n 1 424 ARG n 1 425 ILE n 1 426 LEU n 1 427 ARG n 1 428 MSE n 1 429 GLU n 1 430 TRP n 1 431 ASN n 1 432 LEU n 1 433 GLU n 1 434 ALA n 1 435 TYR n 1 436 ILE n 1 437 SER n 1 438 ARG n 1 439 ASP n 1 440 ARG n 1 441 LYS n 1 442 VAL n 1 443 LEU n 1 444 GLU n 1 445 GLU n 1 446 ILE n 1 447 LEU n 1 448 ILE n 1 449 ARG n 1 450 ASP n 1 451 PRO n 1 452 ARG n 1 453 THR n 1 454 LYS n 1 455 SER n 1 456 TYR n 1 457 GLU n 1 458 GLN n 1 459 ILE n 1 460 VAL n 1 461 GLN n 1 462 VAL n 1 463 LEU n 1 464 ASP n 1 465 GLU n 1 466 ILE n 1 467 PHE n 1 468 ASN n 1 469 LEU n 1 470 PRO n 1 471 PHE n 1 472 ASN n 1 473 GLU n 1 474 GLU n 1 475 LEU n 1 476 ARG n 1 477 ARG n 1 478 TYR n 1 479 TYR n 1 480 LYS n 1 481 GLU n 1 482 LYS n 1 483 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Thermotoga _entity_src_gen.pdbx_gene_src_gene TM0752 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Thermotoga maritima' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2336 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q9WZL1_THEMA _struct_ref.pdbx_db_accession Q9WZL1 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MKISIIGAGSVRFALQLVGDIAQTEELSREDTHIYMMDVHERRLNASYILARKYVEELNSPVKIVKTSSLDEAIDGADFI INTAYPYDPRYHDSGSQRWDEVTKVGEKHGYYRGIDSQELNMVSTYTYVLSSYPDMKLALEIAEKMKKMAPKAYLMQTAN PVFEITQAVRRWTGANIVGFCHGVAGVYEVFEKLDLDPEEVDWQVAGVNHGIWLNRFRYRGEDAYPLLDEWIEKKLPEWE PKNPWDTQMSPAAMDMYKFYGMLPIGDTVRNGSWKYHYNLETKKKWFGKFGGIDNEVERPKFHEQLRRARERLIKLAEEV QQNPGMKLTEEHPEIFPKGKLSGEQHIPFINAIANNKRVRLFLNVENQGTLKDFPDDVVMELPVWVDCCGIHREKVEPDL THRIKIFYLWPRILRMEWNLEAYISRDRKVLEEILIRDPRTKSYEQIVQVLDEIFNLPFNEELRRYYKEKL ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1VJT _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 13 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 483 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9WZL1 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 471 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 471 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1VJT MET A 1 ? UNP Q9WZL1 ? ? 'expression tag' -11 1 1 1VJT GLY A 2 ? UNP Q9WZL1 ? ? 'expression tag' -10 2 1 1VJT SER A 3 ? UNP Q9WZL1 ? ? 'expression tag' -9 3 1 1VJT ASP A 4 ? UNP Q9WZL1 ? ? 'expression tag' -8 4 1 1VJT LYS A 5 ? UNP Q9WZL1 ? ? 'expression tag' -7 5 1 1VJT ILE A 6 ? UNP Q9WZL1 ? ? 'expression tag' -6 6 1 1VJT HIS A 7 ? UNP Q9WZL1 ? ? 'expression tag' -5 7 1 1VJT HIS A 8 ? UNP Q9WZL1 ? ? 'expression tag' -4 8 1 1VJT HIS A 9 ? UNP Q9WZL1 ? ? 'expression tag' -3 9 1 1VJT HIS A 10 ? UNP Q9WZL1 ? ? 'expression tag' -2 10 1 1VJT HIS A 11 ? UNP Q9WZL1 ? ? 'expression tag' -1 11 1 1VJT HIS A 12 ? UNP Q9WZL1 ? ? 'expression tag' 0 12 1 1VJT MSE A 13 ? UNP Q9WZL1 MET 1 'modified residue' 1 13 1 1VJT MSE A 48 ? UNP Q9WZL1 MET 36 'modified residue' 36 14 1 1VJT MSE A 49 ? UNP Q9WZL1 MET 37 'modified residue' 37 15 1 1VJT MSE A 134 ? UNP Q9WZL1 MET 122 'modified residue' 122 16 1 1VJT MSE A 148 ? UNP Q9WZL1 MET 136 'modified residue' 136 17 1 1VJT MSE A 158 ? UNP Q9WZL1 MET 146 'modified residue' 146 18 1 1VJT MSE A 161 ? UNP Q9WZL1 MET 149 'modified residue' 149 19 1 1VJT MSE A 168 ? UNP Q9WZL1 MET 156 'modified residue' 156 20 1 1VJT MSE A 261 ? UNP Q9WZL1 MET 249 'modified residue' 249 21 1 1VJT MSE A 266 ? UNP Q9WZL1 MET 254 'modified residue' 254 22 1 1VJT MSE A 268 ? UNP Q9WZL1 MET 256 'modified residue' 256 23 1 1VJT MSE A 274 ? UNP Q9WZL1 MET 262 'modified residue' 262 24 1 1VJT MSE A 338 ? UNP Q9WZL1 MET 326 'modified residue' 326 25 1 1VJT MSE A 392 ? UNP Q9WZL1 MET 380 'modified residue' 380 26 1 1VJT MSE A 428 ? UNP Q9WZL1 MET 416 'modified residue' 416 27 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 NAD non-polymer . NICOTINAMIDE-ADENINE-DINUCLEOTIDE ? 'C21 H27 N7 O14 P2' 663.425 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 1VJT # _exptl_crystal.id 1 _exptl_crystal.density_percent_sol 47.87 _exptl_crystal.density_Matthews 2.38 _exptl_crystal.density_meas ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION,SITTING DROP,NANODROP' _exptl_crystal_grow.pH 8.1 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '0.2M tri-lithium citrate tetrahydrate, 20% PEG-3350, pH 8.1, VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type APS _diffrn_detector.details ? _diffrn_detector.pdbx_collection_date 2003-08-08 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Rosenbaum-Rock monochromator' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 1.00000 1.0 2 0.979340 1.0 3 0.979206 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_wavelength_list '1.00000, 0.979340, 0.979206' _diffrn_source.pdbx_wavelength ? # _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 2.50 _reflns.d_resolution_low 50.00 _reflns.number_obs 15162 _reflns.percent_possible_obs 83.34 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_netI_over_sigmaI 19.08 _reflns.B_iso_Wilson_estimate 44.23 _reflns.pdbx_redundancy 3.12 _reflns.pdbx_Rsym_value 0.057 _reflns.entry_id 1VJT _reflns.number_all ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.50 _reflns_shell.d_res_low 2.59 _reflns_shell.percent_possible_all 42.11 _reflns_shell.pdbx_Rsym_value 0.264 _reflns_shell.pdbx_redundancy 2.03 _reflns_shell.number_unique_all 758 _reflns_shell.meanI_over_sigI_obs 3.11 _reflns_shell.Rmerge_I_obs ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.ls_d_res_high 2.50 _refine.ls_d_res_low 43.64 _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_obs 14406 _refine.ls_number_reflns_R_free 754 _refine.ls_percent_reflns_R_free 5.0 _refine.ls_percent_reflns_obs 83.33 _refine.ls_R_factor_obs 0.19754 _refine.ls_R_factor_R_work 0.1944 _refine.ls_R_factor_R_free 0.25602 _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_starting_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.B_iso_mean 26.232 _refine.aniso_B[1][1] 1.18 _refine.aniso_B[2][2] -0.33 _refine.aniso_B[3][3] -0.70 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.36 _refine.aniso_B[2][3] 0.00 _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 2. THE NICOTINAMIDE MOIETY OF NAD WAS NOT VISIBLE IN THE DENSITY. 3. RESIDUAL POSITIVE DIFFERENCE DENSITY LIES CLOSE TO THE SIDECHAINS OF THE ACTIVE SITE RESIDUES SER10 AND PHE13. ; _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free 0.362 _refine.overall_SU_ML 0.237 _refine.overall_SU_B 22.539 _refine.correlation_coeff_Fo_to_Fc 0.932 _refine.correlation_coeff_Fo_to_Fc_free 0.878 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.entry_id 1VJT _refine.ls_R_factor_all ? _refine.ls_number_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3872 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 36 _refine_hist.number_atoms_solvent 48 _refine_hist.number_atoms_total 3956 _refine_hist.d_res_high 2.50 _refine_hist.d_res_low 43.64 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 4018 0.010 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 3595 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 5451 1.171 1.947 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 8355 0.804 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 470 5.525 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 201 39.312 23.582 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 698 17.788 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 31 20.348 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 574 0.069 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 4410 0.003 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 839 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 874 0.197 0.200 ? 'X-RAY DIFFRACTION' ? r_nbd_other 3685 0.172 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_other 2338 0.084 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 107 0.145 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 11 0.228 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 42 0.269 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 8 0.283 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 2546 0.570 1.500 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 946 0.082 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 3812 0.816 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 1881 1.104 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 1639 1.702 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.495 _refine_ls_shell.d_res_low 2.560 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.number_reflns_R_work 512 _refine_ls_shell.R_factor_R_work 0.273 _refine_ls_shell.percent_reflns_R_free 3.58 _refine_ls_shell.number_reflns_R_free 19 _refine_ls_shell.R_factor_R_free 0.357 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _struct.entry_id 1VJT _struct.title 'Crystal structure of Alpha-glucosidase (TM0752) from Thermotoga maritima at 2.50 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;TM0752, ALPHA-GLUCOSIDASE, STRUCTURAL GENOMICS, JCSG, PSI, Protein Structure Initiative, Joint Center for Structural Genomics, HYDROLASE ; _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.entry_id 1VJT # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 22 ? THR A 36 ? SER A 10 THR A 24 1 ? 15 HELX_P HELX_P2 2 HIS A 52 ? ASN A 71 ? HIS A 40 ASN A 59 1 ? 20 HELX_P HELX_P3 3 SER A 81 ? ASP A 87 ? SER A 69 ASP A 75 1 ? 7 HELX_P HELX_P4 4 SER A 106 ? HIS A 121 ? SER A 94 HIS A 109 1 ? 16 HELX_P HELX_P5 5 SER A 144 ? ALA A 162 ? SER A 132 ALA A 150 1 ? 19 HELX_P HELX_P6 6 PRO A 173 ? THR A 185 ? PRO A 161 THR A 173 1 ? 13 HELX_P HELX_P7 7 HIS A 194 ? ALA A 197 ? HIS A 182 ALA A 185 5 ? 4 HELX_P HELX_P8 8 GLY A 198 ? LEU A 206 ? GLY A 186 LEU A 194 1 ? 9 HELX_P HELX_P9 9 ASP A 209 ? GLU A 211 ? ASP A 197 GLU A 199 5 ? 3 HELX_P HELX_P10 10 ALA A 236 ? LYS A 247 ? ALA A 224 LYS A 235 1 ? 12 HELX_P HELX_P11 11 LEU A 248 ? TRP A 251 ? LEU A 236 TRP A 239 5 ? 4 HELX_P HELX_P12 12 SER A 262 ? GLY A 273 ? SER A 250 GLY A 261 1 ? 12 HELX_P HELX_P13 13 GLY A 278 ? VAL A 281 ? GLY A 266 VAL A 269 5 ? 4 HELX_P HELX_P14 14 SER A 285 ? HIS A 289 ? SER A 273 HIS A 277 5 ? 5 HELX_P HELX_P15 15 ASN A 291 ? GLY A 300 ? ASN A 279 GLY A 288 1 ? 10 HELX_P HELX_P16 16 VAL A 309 ? ASN A 335 ? VAL A 297 ASN A 323 1 ? 27 HELX_P HELX_P17 17 LYS A 339 ? HIS A 344 ? LYS A 327 HIS A 332 1 ? 6 HELX_P HELX_P18 18 GLN A 357 ? ASN A 368 ? GLN A 345 ASN A 356 1 ? 12 HELX_P HELX_P19 19 THR A 413 ? TYR A 420 ? THR A 401 TYR A 408 1 ? 8 HELX_P HELX_P20 20 TYR A 420 ? ARG A 438 ? TYR A 408 ARG A 426 1 ? 19 HELX_P HELX_P21 21 ASP A 439 ? ARG A 449 ? ASP A 427 ARG A 437 1 ? 11 HELX_P HELX_P22 22 SER A 455 ? ASN A 468 ? SER A 443 ASN A 456 1 ? 14 HELX_P HELX_P23 23 LEU A 469 ? PHE A 471 ? LEU A 457 PHE A 459 5 ? 3 HELX_P HELX_P24 24 ASN A 472 ? TYR A 479 ? ASN A 460 TYR A 467 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A HIS 12 C ? ? ? 1_555 A MSE 13 N ? ? A HIS 0 A MSE 1 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale2 covale both ? A MSE 13 C ? ? ? 1_555 A LYS 14 N ? ? A MSE 1 A LYS 2 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale3 covale both ? A TYR 47 C ? ? ? 1_555 A MSE 48 N ? ? A TYR 35 A MSE 36 1_555 ? ? ? ? ? ? ? 1.321 ? ? covale4 covale both ? A MSE 48 C ? ? ? 1_555 A MSE 49 N ? ? A MSE 36 A MSE 37 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale5 covale both ? A MSE 49 C ? ? ? 1_555 A ASP 50 N ? ? A MSE 37 A ASP 38 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale6 covale both ? A ASN 133 C ? ? ? 1_555 A MSE 134 N ? ? A ASN 121 A MSE 122 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale7 covale both ? A MSE 134 C ? ? ? 1_555 A VAL 135 N ? ? A MSE 122 A VAL 123 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale8 covale both ? A ASP 147 C ? ? ? 1_555 A MSE 148 N ? ? A ASP 135 A MSE 136 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale9 covale both ? A MSE 148 C ? ? ? 1_555 A LYS 149 N ? ? A MSE 136 A LYS 137 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale10 covale both ? A LYS 157 C ? ? ? 1_555 A MSE 158 N ? ? A LYS 145 A MSE 146 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale11 covale both ? A MSE 158 C ? ? ? 1_555 A LYS 159 N ? ? A MSE 146 A LYS 147 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale12 covale both ? A LYS 160 C ? ? ? 1_555 A MSE 161 N ? ? A LYS 148 A MSE 149 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale13 covale both ? A MSE 161 C ? ? ? 1_555 A ALA 162 N ? ? A MSE 149 A ALA 150 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale14 covale both ? A LEU 167 C ? ? ? 1_555 A MSE 168 N ? ? A LEU 155 A MSE 156 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale15 covale both ? A MSE 168 C ? ? ? 1_555 A GLN 169 N ? ? A MSE 156 A GLN 157 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale16 covale both ? A GLN 260 C ? ? ? 1_555 A MSE 261 N ? ? A GLN 248 A MSE 249 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale17 covale both ? A MSE 261 C ? ? ? 1_555 A SER 262 N ? ? A MSE 249 A SER 250 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale18 covale both ? A ALA 265 C ? ? ? 1_555 A MSE 266 N ? ? A ALA 253 A MSE 254 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale19 covale both ? A MSE 266 C ? ? ? 1_555 A ASP 267 N ? ? A MSE 254 A ASP 255 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale20 covale both ? A ASP 267 C ? ? ? 1_555 A MSE 268 N ? ? A ASP 255 A MSE 256 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale21 covale both ? A MSE 268 C ? ? ? 1_555 A TYR 269 N ? ? A MSE 256 A TYR 257 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale22 covale both ? A GLY 273 C ? ? ? 1_555 A MSE 274 N ? ? A GLY 261 A MSE 262 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale23 covale both ? A MSE 274 C ? ? ? 1_555 A LEU 275 N ? ? A MSE 262 A LEU 263 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale24 covale both ? A GLY 337 C ? ? ? 1_555 A MSE 338 N ? ? A GLY 325 A MSE 326 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale25 covale both ? A MSE 338 C ? ? ? 1_555 A LYS 339 N ? ? A MSE 326 A LYS 327 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale26 covale both ? A VAL 391 C ? ? ? 1_555 A MSE 392 N ? ? A VAL 379 A MSE 380 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale27 covale both ? A MSE 392 C ? ? ? 1_555 A GLU 393 N ? ? A MSE 380 A GLU 381 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale28 covale both ? A ARG 427 C ? ? ? 1_555 A MSE 428 N ? ? A ARG 415 A MSE 416 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale29 covale both ? A MSE 428 C ? ? ? 1_555 A GLU 429 N ? ? A MSE 416 A GLU 417 1_555 ? ? ? ? ? ? ? 1.330 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ASN 172 A . ? ASN 160 A PRO 173 A ? PRO 161 A 1 -5.63 2 GLU 409 A . ? GLU 397 A PRO 410 A ? PRO 398 A 1 -1.73 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 3 ? C ? 3 ? D ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 75 ? THR A 79 ? LYS A 63 THR A 67 A 2 THR A 44 ? MSE A 49 ? THR A 32 MSE A 37 A 3 MSE A 13 ? ILE A 18 ? MSE A 1 ILE A 6 A 4 PHE A 91 ? ASN A 94 ? PHE A 79 ASN A 82 A 5 TYR A 166 ? GLN A 169 ? TYR A 154 GLN A 157 A 6 ILE A 189 ? GLY A 191 ? ILE A 177 GLY A 179 B 1 VAL A 213 ? VAL A 220 ? VAL A 201 VAL A 208 B 2 GLY A 223 ? TYR A 231 ? GLY A 211 TYR A 219 B 3 GLU A 234 ? ASP A 235 ? GLU A 222 ASP A 223 C 1 VAL A 213 ? VAL A 220 ? VAL A 201 VAL A 208 C 2 GLY A 223 ? TYR A 231 ? GLY A 211 TYR A 219 C 3 PRO A 276 ? ILE A 277 ? PRO A 264 ILE A 265 D 1 VAL A 371 ? GLU A 378 ? VAL A 359 GLU A 366 D 2 VAL A 391 ? ASP A 399 ? VAL A 379 ASP A 387 D 3 GLY A 402 ? ARG A 405 ? GLY A 390 ARG A 393 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O VAL A 77 ? O VAL A 65 N ILE A 46 ? N ILE A 34 A 2 3 O HIS A 45 ? O HIS A 33 N MSE A 13 ? N MSE A 1 A 3 4 N ILE A 18 ? N ILE A 6 O ILE A 93 ? O ILE A 81 A 4 5 N ILE A 92 ? N ILE A 80 O MSE A 168 ? O MSE A 156 A 5 6 N LEU A 167 ? N LEU A 155 O VAL A 190 ? O VAL A 178 B 1 2 N ASP A 214 ? N ASP A 202 O ARG A 230 ? O ARG A 218 B 2 3 N TYR A 231 ? N TYR A 219 O GLU A 234 ? O GLU A 222 C 1 2 N ASP A 214 ? N ASP A 202 O ARG A 230 ? O ARG A 218 C 2 3 N ILE A 224 ? N ILE A 212 O ILE A 277 ? O ILE A 265 D 1 2 N LEU A 373 ? N LEU A 361 O VAL A 396 ? O VAL A 384 D 2 3 N TRP A 397 ? N TRP A 385 O HIS A 404 ? O HIS A 392 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id NAD _struct_site.pdbx_auth_seq_id 500 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 15 _struct_site.details 'BINDING SITE FOR RESIDUE NAD A 500' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 15 GLY A 19 ? GLY A 7 . ? 1_555 ? 2 AC1 15 GLY A 21 ? GLY A 9 . ? 1_555 ? 3 AC1 15 SER A 22 ? SER A 10 . ? 1_555 ? 4 AC1 15 MSE A 49 ? MSE A 37 . ? 1_555 ? 5 AC1 15 ASP A 50 ? ASP A 38 . ? 1_555 ? 6 AC1 15 HIS A 52 ? HIS A 40 . ? 1_555 ? 7 AC1 15 ARG A 55 ? ARG A 43 . ? 1_555 ? 8 AC1 15 THR A 95 ? THR A 83 . ? 1_555 ? 9 AC1 15 ALA A 96 ? ALA A 84 . ? 1_555 ? 10 AC1 15 TYR A 97 ? TYR A 85 . ? 1_555 ? 11 AC1 15 PRO A 98 ? PRO A 86 . ? 1_555 ? 12 AC1 15 THR A 170 ? THR A 158 . ? 1_555 ? 13 AC1 15 ALA A 171 ? ALA A 159 . ? 1_555 ? 14 AC1 15 ASN A 172 ? ASN A 160 . ? 1_555 ? 15 AC1 15 ARG A 322 ? ARG A 310 . ? 1_555 ? # _atom_sites.entry_id 1VJT _atom_sites.fract_transf_matrix[1][1] 0.013206 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.002805 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012529 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011458 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -11 ? ? ? A . n A 1 2 GLY 2 -10 ? ? ? A . n A 1 3 SER 3 -9 ? ? ? A . n A 1 4 ASP 4 -8 ? ? ? A . n A 1 5 LYS 5 -7 ? ? ? A . n A 1 6 ILE 6 -6 ? ? ? A . n A 1 7 HIS 7 -5 ? ? ? A . n A 1 8 HIS 8 -4 ? ? ? A . n A 1 9 HIS 9 -3 ? ? ? A . n A 1 10 HIS 10 -2 ? ? ? A . n A 1 11 HIS 11 -1 -1 HIS HIS A . n A 1 12 HIS 12 0 0 HIS HIS A . n A 1 13 MSE 13 1 1 MSE MSE A . n A 1 14 LYS 14 2 2 LYS LYS A . n A 1 15 ILE 15 3 3 ILE ILE A . n A 1 16 SER 16 4 4 SER SER A . n A 1 17 ILE 17 5 5 ILE ILE A . n A 1 18 ILE 18 6 6 ILE ILE A . n A 1 19 GLY 19 7 7 GLY GLY A . n A 1 20 ALA 20 8 8 ALA ALA A . n A 1 21 GLY 21 9 9 GLY GLY A . n A 1 22 SER 22 10 10 SER SER A . n A 1 23 VAL 23 11 11 VAL VAL A . n A 1 24 ARG 24 12 12 ARG ARG A . n A 1 25 PHE 25 13 13 PHE PHE A . n A 1 26 ALA 26 14 14 ALA ALA A . n A 1 27 LEU 27 15 15 LEU LEU A . n A 1 28 GLN 28 16 16 GLN GLN A . n A 1 29 LEU 29 17 17 LEU LEU A . n A 1 30 VAL 30 18 18 VAL VAL A . n A 1 31 GLY 31 19 19 GLY GLY A . n A 1 32 ASP 32 20 20 ASP ASP A . n A 1 33 ILE 33 21 21 ILE ILE A . n A 1 34 ALA 34 22 22 ALA ALA A . n A 1 35 GLN 35 23 23 GLN GLN A . n A 1 36 THR 36 24 24 THR THR A . n A 1 37 GLU 37 25 25 GLU GLU A . n A 1 38 GLU 38 26 26 GLU GLU A . n A 1 39 LEU 39 27 27 LEU LEU A . n A 1 40 SER 40 28 28 SER SER A . n A 1 41 ARG 41 29 29 ARG ARG A . n A 1 42 GLU 42 30 30 GLU GLU A . n A 1 43 ASP 43 31 31 ASP ASP A . n A 1 44 THR 44 32 32 THR THR A . n A 1 45 HIS 45 33 33 HIS HIS A . n A 1 46 ILE 46 34 34 ILE ILE A . n A 1 47 TYR 47 35 35 TYR TYR A . n A 1 48 MSE 48 36 36 MSE MSE A . n A 1 49 MSE 49 37 37 MSE MSE A . n A 1 50 ASP 50 38 38 ASP ASP A . n A 1 51 VAL 51 39 39 VAL VAL A . n A 1 52 HIS 52 40 40 HIS HIS A . n A 1 53 GLU 53 41 41 GLU GLU A . n A 1 54 ARG 54 42 42 ARG ARG A . n A 1 55 ARG 55 43 43 ARG ARG A . n A 1 56 LEU 56 44 44 LEU LEU A . n A 1 57 ASN 57 45 45 ASN ASN A . n A 1 58 ALA 58 46 46 ALA ALA A . n A 1 59 SER 59 47 47 SER SER A . n A 1 60 TYR 60 48 48 TYR TYR A . n A 1 61 ILE 61 49 49 ILE ILE A . n A 1 62 LEU 62 50 50 LEU LEU A . n A 1 63 ALA 63 51 51 ALA ALA A . n A 1 64 ARG 64 52 52 ARG ARG A . n A 1 65 LYS 65 53 53 LYS LYS A . n A 1 66 TYR 66 54 54 TYR TYR A . n A 1 67 VAL 67 55 55 VAL VAL A . n A 1 68 GLU 68 56 56 GLU GLU A . n A 1 69 GLU 69 57 57 GLU GLU A . n A 1 70 LEU 70 58 58 LEU LEU A . n A 1 71 ASN 71 59 59 ASN ASN A . n A 1 72 SER 72 60 60 SER SER A . n A 1 73 PRO 73 61 61 PRO PRO A . n A 1 74 VAL 74 62 62 VAL VAL A . n A 1 75 LYS 75 63 63 LYS LYS A . n A 1 76 ILE 76 64 64 ILE ILE A . n A 1 77 VAL 77 65 65 VAL VAL A . n A 1 78 LYS 78 66 66 LYS LYS A . n A 1 79 THR 79 67 67 THR THR A . n A 1 80 SER 80 68 68 SER SER A . n A 1 81 SER 81 69 69 SER SER A . n A 1 82 LEU 82 70 70 LEU LEU A . n A 1 83 ASP 83 71 71 ASP ASP A . n A 1 84 GLU 84 72 72 GLU GLU A . n A 1 85 ALA 85 73 73 ALA ALA A . n A 1 86 ILE 86 74 74 ILE ILE A . n A 1 87 ASP 87 75 75 ASP ASP A . n A 1 88 GLY 88 76 76 GLY GLY A . n A 1 89 ALA 89 77 77 ALA ALA A . n A 1 90 ASP 90 78 78 ASP ASP A . n A 1 91 PHE 91 79 79 PHE PHE A . n A 1 92 ILE 92 80 80 ILE ILE A . n A 1 93 ILE 93 81 81 ILE ILE A . n A 1 94 ASN 94 82 82 ASN ASN A . n A 1 95 THR 95 83 83 THR THR A . n A 1 96 ALA 96 84 84 ALA ALA A . n A 1 97 TYR 97 85 85 TYR TYR A . n A 1 98 PRO 98 86 86 PRO PRO A . n A 1 99 TYR 99 87 87 TYR TYR A . n A 1 100 ASP 100 88 88 ASP ASP A . n A 1 101 PRO 101 89 89 PRO PRO A . n A 1 102 ARG 102 90 90 ARG ARG A . n A 1 103 TYR 103 91 91 TYR TYR A . n A 1 104 HIS 104 92 92 HIS HIS A . n A 1 105 ASP 105 93 93 ASP ASP A . n A 1 106 SER 106 94 94 SER SER A . n A 1 107 GLY 107 95 95 GLY GLY A . n A 1 108 SER 108 96 96 SER SER A . n A 1 109 GLN 109 97 97 GLN GLN A . n A 1 110 ARG 110 98 98 ARG ARG A . n A 1 111 TRP 111 99 99 TRP TRP A . n A 1 112 ASP 112 100 100 ASP ASP A . n A 1 113 GLU 113 101 101 GLU GLU A . n A 1 114 VAL 114 102 102 VAL VAL A . n A 1 115 THR 115 103 103 THR THR A . n A 1 116 LYS 116 104 104 LYS LYS A . n A 1 117 VAL 117 105 105 VAL VAL A . n A 1 118 GLY 118 106 106 GLY GLY A . n A 1 119 GLU 119 107 107 GLU GLU A . n A 1 120 LYS 120 108 108 LYS LYS A . n A 1 121 HIS 121 109 109 HIS HIS A . n A 1 122 GLY 122 110 110 GLY GLY A . n A 1 123 TYR 123 111 111 TYR TYR A . n A 1 124 TYR 124 112 112 TYR TYR A . n A 1 125 ARG 125 113 113 ARG ARG A . n A 1 126 GLY 126 114 114 GLY GLY A . n A 1 127 ILE 127 115 115 ILE ILE A . n A 1 128 ASP 128 116 116 ASP ASP A . n A 1 129 SER 129 117 117 SER SER A . n A 1 130 GLN 130 118 118 GLN GLN A . n A 1 131 GLU 131 119 119 GLU GLU A . n A 1 132 LEU 132 120 120 LEU LEU A . n A 1 133 ASN 133 121 121 ASN ASN A . n A 1 134 MSE 134 122 122 MSE MSE A . n A 1 135 VAL 135 123 123 VAL VAL A . n A 1 136 SER 136 124 124 SER SER A . n A 1 137 THR 137 125 125 THR THR A . n A 1 138 TYR 138 126 126 TYR TYR A . n A 1 139 THR 139 127 127 THR THR A . n A 1 140 TYR 140 128 128 TYR TYR A . n A 1 141 VAL 141 129 129 VAL VAL A . n A 1 142 LEU 142 130 130 LEU LEU A . n A 1 143 SER 143 131 131 SER SER A . n A 1 144 SER 144 132 132 SER SER A . n A 1 145 TYR 145 133 133 TYR TYR A . n A 1 146 PRO 146 134 134 PRO PRO A . n A 1 147 ASP 147 135 135 ASP ASP A . n A 1 148 MSE 148 136 136 MSE MSE A . n A 1 149 LYS 149 137 137 LYS LYS A . n A 1 150 LEU 150 138 138 LEU LEU A . n A 1 151 ALA 151 139 139 ALA ALA A . n A 1 152 LEU 152 140 140 LEU LEU A . n A 1 153 GLU 153 141 141 GLU GLU A . n A 1 154 ILE 154 142 142 ILE ILE A . n A 1 155 ALA 155 143 143 ALA ALA A . n A 1 156 GLU 156 144 144 GLU GLU A . n A 1 157 LYS 157 145 145 LYS LYS A . n A 1 158 MSE 158 146 146 MSE MSE A . n A 1 159 LYS 159 147 147 LYS LYS A . n A 1 160 LYS 160 148 148 LYS LYS A . n A 1 161 MSE 161 149 149 MSE MSE A . n A 1 162 ALA 162 150 150 ALA ALA A . n A 1 163 PRO 163 151 151 PRO PRO A . n A 1 164 LYS 164 152 152 LYS LYS A . n A 1 165 ALA 165 153 153 ALA ALA A . n A 1 166 TYR 166 154 154 TYR TYR A . n A 1 167 LEU 167 155 155 LEU LEU A . n A 1 168 MSE 168 156 156 MSE MSE A . n A 1 169 GLN 169 157 157 GLN GLN A . n A 1 170 THR 170 158 158 THR THR A . n A 1 171 ALA 171 159 159 ALA ALA A . n A 1 172 ASN 172 160 160 ASN ASN A . n A 1 173 PRO 173 161 161 PRO PRO A . n A 1 174 VAL 174 162 162 VAL VAL A . n A 1 175 PHE 175 163 163 PHE PHE A . n A 1 176 GLU 176 164 164 GLU GLU A . n A 1 177 ILE 177 165 165 ILE ILE A . n A 1 178 THR 178 166 166 THR THR A . n A 1 179 GLN 179 167 167 GLN GLN A . n A 1 180 ALA 180 168 168 ALA ALA A . n A 1 181 VAL 181 169 169 VAL VAL A . n A 1 182 ARG 182 170 170 ARG ARG A . n A 1 183 ARG 183 171 171 ARG ARG A . n A 1 184 TRP 184 172 172 TRP TRP A . n A 1 185 THR 185 173 173 THR THR A . n A 1 186 GLY 186 174 174 GLY GLY A . n A 1 187 ALA 187 175 175 ALA ALA A . n A 1 188 ASN 188 176 176 ASN ASN A . n A 1 189 ILE 189 177 177 ILE ILE A . n A 1 190 VAL 190 178 178 VAL VAL A . n A 1 191 GLY 191 179 179 GLY GLY A . n A 1 192 PHE 192 180 180 PHE PHE A . n A 1 193 CYS 193 181 181 CYS CYS A . n A 1 194 HIS 194 182 182 HIS HIS A . n A 1 195 GLY 195 183 183 GLY GLY A . n A 1 196 VAL 196 184 184 VAL VAL A . n A 1 197 ALA 197 185 185 ALA ALA A . n A 1 198 GLY 198 186 186 GLY GLY A . n A 1 199 VAL 199 187 187 VAL VAL A . n A 1 200 TYR 200 188 188 TYR TYR A . n A 1 201 GLU 201 189 189 GLU GLU A . n A 1 202 VAL 202 190 190 VAL VAL A . n A 1 203 PHE 203 191 191 PHE PHE A . n A 1 204 GLU 204 192 192 GLU GLU A . n A 1 205 LYS 205 193 193 LYS LYS A . n A 1 206 LEU 206 194 194 LEU LEU A . n A 1 207 ASP 207 195 195 ASP ASP A . n A 1 208 LEU 208 196 196 LEU LEU A . n A 1 209 ASP 209 197 197 ASP ASP A . n A 1 210 PRO 210 198 198 PRO PRO A . n A 1 211 GLU 211 199 199 GLU GLU A . n A 1 212 GLU 212 200 200 GLU GLU A . n A 1 213 VAL 213 201 201 VAL VAL A . n A 1 214 ASP 214 202 202 ASP ASP A . n A 1 215 TRP 215 203 203 TRP TRP A . n A 1 216 GLN 216 204 204 GLN GLN A . n A 1 217 VAL 217 205 205 VAL VAL A . n A 1 218 ALA 218 206 206 ALA ALA A . n A 1 219 GLY 219 207 207 GLY GLY A . n A 1 220 VAL 220 208 208 VAL VAL A . n A 1 221 ASN 221 209 209 ASN ASN A . n A 1 222 HIS 222 210 210 HIS HIS A . n A 1 223 GLY 223 211 211 GLY GLY A . n A 1 224 ILE 224 212 212 ILE ILE A . n A 1 225 TRP 225 213 213 TRP TRP A . n A 1 226 LEU 226 214 214 LEU LEU A . n A 1 227 ASN 227 215 215 ASN ASN A . n A 1 228 ARG 228 216 216 ARG ARG A . n A 1 229 PHE 229 217 217 PHE PHE A . n A 1 230 ARG 230 218 218 ARG ARG A . n A 1 231 TYR 231 219 219 TYR TYR A . n A 1 232 ARG 232 220 220 ARG ARG A . n A 1 233 GLY 233 221 221 GLY GLY A . n A 1 234 GLU 234 222 222 GLU GLU A . n A 1 235 ASP 235 223 223 ASP ASP A . n A 1 236 ALA 236 224 224 ALA ALA A . n A 1 237 TYR 237 225 225 TYR TYR A . n A 1 238 PRO 238 226 226 PRO PRO A . n A 1 239 LEU 239 227 227 LEU LEU A . n A 1 240 LEU 240 228 228 LEU LEU A . n A 1 241 ASP 241 229 229 ASP ASP A . n A 1 242 GLU 242 230 230 GLU GLU A . n A 1 243 TRP 243 231 231 TRP TRP A . n A 1 244 ILE 244 232 232 ILE ILE A . n A 1 245 GLU 245 233 233 GLU GLU A . n A 1 246 LYS 246 234 234 LYS LYS A . n A 1 247 LYS 247 235 235 LYS LYS A . n A 1 248 LEU 248 236 236 LEU LEU A . n A 1 249 PRO 249 237 237 PRO PRO A . n A 1 250 GLU 250 238 238 GLU GLU A . n A 1 251 TRP 251 239 239 TRP TRP A . n A 1 252 GLU 252 240 240 GLU GLU A . n A 1 253 PRO 253 241 241 PRO PRO A . n A 1 254 LYS 254 242 242 LYS LYS A . n A 1 255 ASN 255 243 243 ASN ASN A . n A 1 256 PRO 256 244 244 PRO PRO A . n A 1 257 TRP 257 245 245 TRP TRP A . n A 1 258 ASP 258 246 246 ASP ASP A . n A 1 259 THR 259 247 247 THR THR A . n A 1 260 GLN 260 248 248 GLN GLN A . n A 1 261 MSE 261 249 249 MSE MSE A . n A 1 262 SER 262 250 250 SER SER A . n A 1 263 PRO 263 251 251 PRO PRO A . n A 1 264 ALA 264 252 252 ALA ALA A . n A 1 265 ALA 265 253 253 ALA ALA A . n A 1 266 MSE 266 254 254 MSE MSE A . n A 1 267 ASP 267 255 255 ASP ASP A . n A 1 268 MSE 268 256 256 MSE MSE A . n A 1 269 TYR 269 257 257 TYR TYR A . n A 1 270 LYS 270 258 258 LYS LYS A . n A 1 271 PHE 271 259 259 PHE PHE A . n A 1 272 TYR 272 260 260 TYR TYR A . n A 1 273 GLY 273 261 261 GLY GLY A . n A 1 274 MSE 274 262 262 MSE MSE A . n A 1 275 LEU 275 263 263 LEU LEU A . n A 1 276 PRO 276 264 264 PRO PRO A . n A 1 277 ILE 277 265 265 ILE ILE A . n A 1 278 GLY 278 266 266 GLY GLY A . n A 1 279 ASP 279 267 267 ASP ASP A . n A 1 280 THR 280 268 268 THR THR A . n A 1 281 VAL 281 269 269 VAL VAL A . n A 1 282 ARG 282 270 270 ARG ARG A . n A 1 283 ASN 283 271 271 ASN ASN A . n A 1 284 GLY 284 272 272 GLY GLY A . n A 1 285 SER 285 273 273 SER SER A . n A 1 286 TRP 286 274 274 TRP TRP A . n A 1 287 LYS 287 275 275 LYS LYS A . n A 1 288 TYR 288 276 276 TYR TYR A . n A 1 289 HIS 289 277 277 HIS HIS A . n A 1 290 TYR 290 278 278 TYR TYR A . n A 1 291 ASN 291 279 279 ASN ASN A . n A 1 292 LEU 292 280 280 LEU LEU A . n A 1 293 GLU 293 281 281 GLU GLU A . n A 1 294 THR 294 282 282 THR THR A . n A 1 295 LYS 295 283 283 LYS LYS A . n A 1 296 LYS 296 284 284 LYS LYS A . n A 1 297 LYS 297 285 285 LYS LYS A . n A 1 298 TRP 298 286 286 TRP TRP A . n A 1 299 PHE 299 287 287 PHE PHE A . n A 1 300 GLY 300 288 288 GLY GLY A . n A 1 301 LYS 301 289 289 LYS LYS A . n A 1 302 PHE 302 290 290 PHE PHE A . n A 1 303 GLY 303 291 291 GLY GLY A . n A 1 304 GLY 304 292 292 GLY GLY A . n A 1 305 ILE 305 293 293 ILE ILE A . n A 1 306 ASP 306 294 294 ASP ASP A . n A 1 307 ASN 307 295 295 ASN ASN A . n A 1 308 GLU 308 296 296 GLU GLU A . n A 1 309 VAL 309 297 297 VAL VAL A . n A 1 310 GLU 310 298 298 GLU GLU A . n A 1 311 ARG 311 299 299 ARG ARG A . n A 1 312 PRO 312 300 300 PRO PRO A . n A 1 313 LYS 313 301 301 LYS LYS A . n A 1 314 PHE 314 302 302 PHE PHE A . n A 1 315 HIS 315 303 303 HIS HIS A . n A 1 316 GLU 316 304 304 GLU GLU A . n A 1 317 GLN 317 305 305 GLN GLN A . n A 1 318 LEU 318 306 306 LEU LEU A . n A 1 319 ARG 319 307 307 ARG ARG A . n A 1 320 ARG 320 308 308 ARG ARG A . n A 1 321 ALA 321 309 309 ALA ALA A . n A 1 322 ARG 322 310 310 ARG ARG A . n A 1 323 GLU 323 311 311 GLU GLU A . n A 1 324 ARG 324 312 312 ARG ARG A . n A 1 325 LEU 325 313 313 LEU LEU A . n A 1 326 ILE 326 314 314 ILE ILE A . n A 1 327 LYS 327 315 315 LYS LYS A . n A 1 328 LEU 328 316 316 LEU LEU A . n A 1 329 ALA 329 317 317 ALA ALA A . n A 1 330 GLU 330 318 318 GLU GLU A . n A 1 331 GLU 331 319 319 GLU GLU A . n A 1 332 VAL 332 320 320 VAL VAL A . n A 1 333 GLN 333 321 321 GLN GLN A . n A 1 334 GLN 334 322 322 GLN GLN A . n A 1 335 ASN 335 323 323 ASN ASN A . n A 1 336 PRO 336 324 324 PRO PRO A . n A 1 337 GLY 337 325 325 GLY GLY A . n A 1 338 MSE 338 326 326 MSE MSE A . n A 1 339 LYS 339 327 327 LYS LYS A . n A 1 340 LEU 340 328 328 LEU LEU A . n A 1 341 THR 341 329 329 THR THR A . n A 1 342 GLU 342 330 330 GLU GLU A . n A 1 343 GLU 343 331 331 GLU GLU A . n A 1 344 HIS 344 332 332 HIS HIS A . n A 1 345 PRO 345 333 333 PRO PRO A . n A 1 346 GLU 346 334 334 GLU GLU A . n A 1 347 ILE 347 335 335 ILE ILE A . n A 1 348 PHE 348 336 336 PHE PHE A . n A 1 349 PRO 349 337 337 PRO PRO A . n A 1 350 LYS 350 338 338 LYS LYS A . n A 1 351 GLY 351 339 339 GLY GLY A . n A 1 352 LYS 352 340 340 LYS LYS A . n A 1 353 LEU 353 341 341 LEU LEU A . n A 1 354 SER 354 342 342 SER SER A . n A 1 355 GLY 355 343 343 GLY GLY A . n A 1 356 GLU 356 344 344 GLU GLU A . n A 1 357 GLN 357 345 345 GLN GLN A . n A 1 358 HIS 358 346 346 HIS HIS A . n A 1 359 ILE 359 347 347 ILE ILE A . n A 1 360 PRO 360 348 348 PRO PRO A . n A 1 361 PHE 361 349 349 PHE PHE A . n A 1 362 ILE 362 350 350 ILE ILE A . n A 1 363 ASN 363 351 351 ASN ASN A . n A 1 364 ALA 364 352 352 ALA ALA A . n A 1 365 ILE 365 353 353 ILE ILE A . n A 1 366 ALA 366 354 354 ALA ALA A . n A 1 367 ASN 367 355 355 ASN ASN A . n A 1 368 ASN 368 356 356 ASN ASN A . n A 1 369 LYS 369 357 357 LYS LYS A . n A 1 370 ARG 370 358 358 ARG ARG A . n A 1 371 VAL 371 359 359 VAL VAL A . n A 1 372 ARG 372 360 360 ARG ARG A . n A 1 373 LEU 373 361 361 LEU LEU A . n A 1 374 PHE 374 362 362 PHE PHE A . n A 1 375 LEU 375 363 363 LEU LEU A . n A 1 376 ASN 376 364 364 ASN ASN A . n A 1 377 VAL 377 365 365 VAL VAL A . n A 1 378 GLU 378 366 366 GLU GLU A . n A 1 379 ASN 379 367 367 ASN ASN A . n A 1 380 GLN 380 368 368 GLN GLN A . n A 1 381 GLY 381 369 369 GLY GLY A . n A 1 382 THR 382 370 370 THR THR A . n A 1 383 LEU 383 371 371 LEU LEU A . n A 1 384 LYS 384 372 372 LYS LYS A . n A 1 385 ASP 385 373 373 ASP ASP A . n A 1 386 PHE 386 374 374 PHE PHE A . n A 1 387 PRO 387 375 375 PRO PRO A . n A 1 388 ASP 388 376 376 ASP ASP A . n A 1 389 ASP 389 377 377 ASP ASP A . n A 1 390 VAL 390 378 378 VAL VAL A . n A 1 391 VAL 391 379 379 VAL VAL A . n A 1 392 MSE 392 380 380 MSE MSE A . n A 1 393 GLU 393 381 381 GLU GLU A . n A 1 394 LEU 394 382 382 LEU LEU A . n A 1 395 PRO 395 383 383 PRO PRO A . n A 1 396 VAL 396 384 384 VAL VAL A . n A 1 397 TRP 397 385 385 TRP TRP A . n A 1 398 VAL 398 386 386 VAL VAL A . n A 1 399 ASP 399 387 387 ASP ASP A . n A 1 400 CYS 400 388 388 CYS CYS A . n A 1 401 CYS 401 389 389 CYS CYS A . n A 1 402 GLY 402 390 390 GLY GLY A . n A 1 403 ILE 403 391 391 ILE ILE A . n A 1 404 HIS 404 392 392 HIS HIS A . n A 1 405 ARG 405 393 393 ARG ARG A . n A 1 406 GLU 406 394 394 GLU GLU A . n A 1 407 LYS 407 395 395 LYS LYS A . n A 1 408 VAL 408 396 396 VAL VAL A . n A 1 409 GLU 409 397 397 GLU GLU A . n A 1 410 PRO 410 398 398 PRO PRO A . n A 1 411 ASP 411 399 399 ASP ASP A . n A 1 412 LEU 412 400 400 LEU LEU A . n A 1 413 THR 413 401 401 THR THR A . n A 1 414 HIS 414 402 402 HIS HIS A . n A 1 415 ARG 415 403 403 ARG ARG A . n A 1 416 ILE 416 404 404 ILE ILE A . n A 1 417 LYS 417 405 405 LYS LYS A . n A 1 418 ILE 418 406 406 ILE ILE A . n A 1 419 PHE 419 407 407 PHE PHE A . n A 1 420 TYR 420 408 408 TYR TYR A . n A 1 421 LEU 421 409 409 LEU LEU A . n A 1 422 TRP 422 410 410 TRP TRP A . n A 1 423 PRO 423 411 411 PRO PRO A . n A 1 424 ARG 424 412 412 ARG ARG A . n A 1 425 ILE 425 413 413 ILE ILE A . n A 1 426 LEU 426 414 414 LEU LEU A . n A 1 427 ARG 427 415 415 ARG ARG A . n A 1 428 MSE 428 416 416 MSE MSE A . n A 1 429 GLU 429 417 417 GLU GLU A . n A 1 430 TRP 430 418 418 TRP TRP A . n A 1 431 ASN 431 419 419 ASN ASN A . n A 1 432 LEU 432 420 420 LEU LEU A . n A 1 433 GLU 433 421 421 GLU GLU A . n A 1 434 ALA 434 422 422 ALA ALA A . n A 1 435 TYR 435 423 423 TYR TYR A . n A 1 436 ILE 436 424 424 ILE ILE A . n A 1 437 SER 437 425 425 SER SER A . n A 1 438 ARG 438 426 426 ARG ARG A . n A 1 439 ASP 439 427 427 ASP ASP A . n A 1 440 ARG 440 428 428 ARG ARG A . n A 1 441 LYS 441 429 429 LYS LYS A . n A 1 442 VAL 442 430 430 VAL VAL A . n A 1 443 LEU 443 431 431 LEU LEU A . n A 1 444 GLU 444 432 432 GLU GLU A . n A 1 445 GLU 445 433 433 GLU GLU A . n A 1 446 ILE 446 434 434 ILE ILE A . n A 1 447 LEU 447 435 435 LEU LEU A . n A 1 448 ILE 448 436 436 ILE ILE A . n A 1 449 ARG 449 437 437 ARG ARG A . n A 1 450 ASP 450 438 438 ASP ASP A . n A 1 451 PRO 451 439 439 PRO PRO A . n A 1 452 ARG 452 440 440 ARG ARG A . n A 1 453 THR 453 441 441 THR THR A . n A 1 454 LYS 454 442 442 LYS LYS A . n A 1 455 SER 455 443 443 SER SER A . n A 1 456 TYR 456 444 444 TYR TYR A . n A 1 457 GLU 457 445 445 GLU GLU A . n A 1 458 GLN 458 446 446 GLN GLN A . n A 1 459 ILE 459 447 447 ILE ILE A . n A 1 460 VAL 460 448 448 VAL VAL A . n A 1 461 GLN 461 449 449 GLN GLN A . n A 1 462 VAL 462 450 450 VAL VAL A . n A 1 463 LEU 463 451 451 LEU LEU A . n A 1 464 ASP 464 452 452 ASP ASP A . n A 1 465 GLU 465 453 453 GLU GLU A . n A 1 466 ILE 466 454 454 ILE ILE A . n A 1 467 PHE 467 455 455 PHE PHE A . n A 1 468 ASN 468 456 456 ASN ASN A . n A 1 469 LEU 469 457 457 LEU LEU A . n A 1 470 PRO 470 458 458 PRO PRO A . n A 1 471 PHE 471 459 459 PHE PHE A . n A 1 472 ASN 472 460 460 ASN ASN A . n A 1 473 GLU 473 461 461 GLU GLU A . n A 1 474 GLU 474 462 462 GLU GLU A . n A 1 475 LEU 475 463 463 LEU LEU A . n A 1 476 ARG 476 464 464 ARG ARG A . n A 1 477 ARG 477 465 465 ARG ARG A . n A 1 478 TYR 478 466 466 TYR TYR A . n A 1 479 TYR 479 467 467 TYR TYR A . n A 1 480 LYS 480 468 468 LYS LYS A . n A 1 481 GLU 481 469 469 GLU GLU A . n A 1 482 LYS 482 470 ? ? ? A . n A 1 483 LEU 483 471 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAD 1 500 500 NAD NAD A . C 3 HOH 1 501 1 HOH HOH A . C 3 HOH 2 502 2 HOH HOH A . C 3 HOH 3 503 3 HOH HOH A . C 3 HOH 4 504 4 HOH HOH A . C 3 HOH 5 505 5 HOH HOH A . C 3 HOH 6 506 6 HOH HOH A . C 3 HOH 7 507 7 HOH HOH A . C 3 HOH 8 508 8 HOH HOH A . C 3 HOH 9 509 9 HOH HOH A . C 3 HOH 10 510 10 HOH HOH A . C 3 HOH 11 511 11 HOH HOH A . C 3 HOH 12 512 12 HOH HOH A . C 3 HOH 13 513 13 HOH HOH A . C 3 HOH 14 514 14 HOH HOH A . C 3 HOH 15 515 15 HOH HOH A . C 3 HOH 16 516 16 HOH HOH A . C 3 HOH 17 517 17 HOH HOH A . C 3 HOH 18 518 18 HOH HOH A . C 3 HOH 19 519 19 HOH HOH A . C 3 HOH 20 520 20 HOH HOH A . C 3 HOH 21 521 21 HOH HOH A . C 3 HOH 22 522 22 HOH HOH A . C 3 HOH 23 523 23 HOH HOH A . C 3 HOH 24 524 24 HOH HOH A . C 3 HOH 25 525 25 HOH HOH A . C 3 HOH 26 526 26 HOH HOH A . C 3 HOH 27 527 27 HOH HOH A . C 3 HOH 28 528 28 HOH HOH A . C 3 HOH 29 529 29 HOH HOH A . C 3 HOH 30 530 30 HOH HOH A . C 3 HOH 31 531 31 HOH HOH A . C 3 HOH 32 532 32 HOH HOH A . C 3 HOH 33 533 33 HOH HOH A . C 3 HOH 34 534 34 HOH HOH A . C 3 HOH 35 535 35 HOH HOH A . C 3 HOH 36 536 36 HOH HOH A . C 3 HOH 37 537 37 HOH HOH A . C 3 HOH 38 538 38 HOH HOH A . C 3 HOH 39 539 39 HOH HOH A . C 3 HOH 40 540 40 HOH HOH A . C 3 HOH 41 541 41 HOH HOH A . C 3 HOH 42 542 42 HOH HOH A . C 3 HOH 43 543 43 HOH HOH A . C 3 HOH 44 544 44 HOH HOH A . C 3 HOH 45 545 45 HOH HOH A . C 3 HOH 46 546 46 HOH HOH A . C 3 HOH 47 547 47 HOH HOH A . C 3 HOH 48 548 48 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 13 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 48 A MSE 36 ? MET SELENOMETHIONINE 3 A MSE 49 A MSE 37 ? MET SELENOMETHIONINE 4 A MSE 134 A MSE 122 ? MET SELENOMETHIONINE 5 A MSE 148 A MSE 136 ? MET SELENOMETHIONINE 6 A MSE 158 A MSE 146 ? MET SELENOMETHIONINE 7 A MSE 161 A MSE 149 ? MET SELENOMETHIONINE 8 A MSE 168 A MSE 156 ? MET SELENOMETHIONINE 9 A MSE 261 A MSE 249 ? MET SELENOMETHIONINE 10 A MSE 266 A MSE 254 ? MET SELENOMETHIONINE 11 A MSE 268 A MSE 256 ? MET SELENOMETHIONINE 12 A MSE 274 A MSE 262 ? MET SELENOMETHIONINE 13 A MSE 338 A MSE 326 ? MET SELENOMETHIONINE 14 A MSE 392 A MSE 380 ? MET SELENOMETHIONINE 15 A MSE 428 A MSE 416 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_756 -x+2,y,-z+1 -1.0000000000 0.0000000000 0.0000000000 132.9089352915 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 87.2755215410 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-03-30 2 'Structure model' 1 1 2008-04-26 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-01-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' struct_conn 3 4 'Structure model' struct_ref_seq_dif 4 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 4 'Structure model' '_struct_ref_seq_dif.details' 5 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.id 1 _pdbx_refine_tls.details . _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 59.5753 _pdbx_refine_tls.origin_y 9.3396 _pdbx_refine_tls.origin_z 21.7988 _pdbx_refine_tls.T[1][1] -0.0468 _pdbx_refine_tls.T[2][2] -0.0221 _pdbx_refine_tls.T[3][3] -0.0112 _pdbx_refine_tls.T[1][2] -0.0034 _pdbx_refine_tls.T[1][3] -0.0251 _pdbx_refine_tls.T[2][3] -0.0208 _pdbx_refine_tls.L[1][1] 0.2988 _pdbx_refine_tls.L[2][2] 0.9307 _pdbx_refine_tls.L[3][3] 1.2814 _pdbx_refine_tls.L[1][2] -0.1978 _pdbx_refine_tls.L[1][3] -0.0578 _pdbx_refine_tls.L[2][3] -0.2684 _pdbx_refine_tls.S[1][1] 0.0067 _pdbx_refine_tls.S[2][2] 0.0214 _pdbx_refine_tls.S[3][3] -0.0281 _pdbx_refine_tls.S[1][2] 0.1826 _pdbx_refine_tls.S[1][3] -0.0399 _pdbx_refine_tls.S[2][3] 0.0420 _pdbx_refine_tls.S[2][1] -0.1821 _pdbx_refine_tls.S[3][1] 0.0202 _pdbx_refine_tls.S[3][2] -0.0437 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_label_asym_id A _pdbx_refine_tls_group.beg_label_seq_id 13 _pdbx_refine_tls_group.end_label_asym_id A _pdbx_refine_tls_group.end_label_seq_id 481 _pdbx_refine_tls_group.selection ALL _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 1 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 469 _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.selection_details ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 autoSHARP phasing . ? 3 RESOLVE 'model building' . ? 4 REFMAC refinement 5.2.0001 ? 5 RESOLVE phasing . ? 6 # _pdbx_database_remark.id 600 _pdbx_database_remark.text ;HETEROGEN THE NICOTINAMIDE MOIETY OF NAD WAS NOT VISIBLE IN THE DENSITY. ; # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CB _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ASP _pdbx_validate_rmsd_angle.auth_seq_id_1 116 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CG _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ASP _pdbx_validate_rmsd_angle.auth_seq_id_2 116 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 OD2 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ASP _pdbx_validate_rmsd_angle.auth_seq_id_3 116 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 123.95 _pdbx_validate_rmsd_angle.angle_target_value 118.30 _pdbx_validate_rmsd_angle.angle_deviation 5.65 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.90 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 10 ? ? -68.77 73.89 2 1 SER A 94 ? ? -173.58 140.91 3 1 ASN A 121 ? ? -160.13 88.38 4 1 LEU A 130 ? ? 66.22 -57.42 5 1 ALA A 150 ? ? -151.18 63.59 6 1 ASN A 271 ? ? -98.63 55.90 7 1 ASN A 323 ? ? -117.05 79.99 8 1 TYR A 408 ? ? -107.65 -65.20 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 144 ? CG ? A GLU 156 CG 2 1 Y 1 A GLU 144 ? CD ? A GLU 156 CD 3 1 Y 1 A GLU 144 ? OE1 ? A GLU 156 OE1 4 1 Y 1 A GLU 144 ? OE2 ? A GLU 156 OE2 5 1 Y 1 A GLU 222 ? CD ? A GLU 234 CD 6 1 Y 1 A GLU 222 ? OE1 ? A GLU 234 OE1 7 1 Y 1 A GLU 222 ? OE2 ? A GLU 234 OE2 8 1 Y 1 A GLU 281 ? CG ? A GLU 293 CG 9 1 Y 1 A GLU 281 ? CD ? A GLU 293 CD 10 1 Y 1 A GLU 281 ? OE1 ? A GLU 293 OE1 11 1 Y 1 A GLU 281 ? OE2 ? A GLU 293 OE2 12 1 Y 1 A LYS 289 ? CE ? A LYS 301 CE 13 1 Y 1 A LYS 289 ? NZ ? A LYS 301 NZ 14 1 Y 1 A GLU 311 ? CG ? A GLU 323 CG 15 1 Y 1 A GLU 311 ? CD ? A GLU 323 CD 16 1 Y 1 A GLU 311 ? OE1 ? A GLU 323 OE1 17 1 Y 1 A GLU 311 ? OE2 ? A GLU 323 OE2 18 1 Y 1 A LYS 327 ? CG ? A LYS 339 CG 19 1 Y 1 A LYS 327 ? CD ? A LYS 339 CD 20 1 Y 1 A LYS 327 ? CE ? A LYS 339 CE 21 1 Y 1 A LYS 327 ? NZ ? A LYS 339 NZ 22 1 Y 1 A GLU 334 ? CG ? A GLU 346 CG 23 1 Y 1 A GLU 334 ? CD ? A GLU 346 CD 24 1 Y 1 A GLU 334 ? OE1 ? A GLU 346 OE1 25 1 Y 1 A GLU 334 ? OE2 ? A GLU 346 OE2 26 1 Y 1 A LYS 372 ? CG ? A LYS 384 CG 27 1 Y 1 A LYS 372 ? CD ? A LYS 384 CD 28 1 Y 1 A LYS 372 ? CE ? A LYS 384 CE 29 1 Y 1 A LYS 372 ? NZ ? A LYS 384 NZ 30 1 Y 1 A ASP 399 ? CG ? A ASP 411 CG 31 1 Y 1 A ASP 399 ? OD1 ? A ASP 411 OD1 32 1 Y 1 A ASP 399 ? OD2 ? A ASP 411 OD2 33 1 Y 1 A GLU 461 ? CG ? A GLU 473 CG 34 1 Y 1 A GLU 461 ? CD ? A GLU 473 CD 35 1 Y 1 A GLU 461 ? OE1 ? A GLU 473 OE1 36 1 Y 1 A GLU 461 ? OE2 ? A GLU 473 OE2 37 1 N 1 A NAD 500 ? C2N ? B NAD 1 C2N 38 1 N 1 A NAD 500 ? C3N ? B NAD 1 C3N 39 1 N 1 A NAD 500 ? C7N ? B NAD 1 C7N 40 1 N 1 A NAD 500 ? O7N ? B NAD 1 O7N 41 1 N 1 A NAD 500 ? N7N ? B NAD 1 N7N 42 1 N 1 A NAD 500 ? C4N ? B NAD 1 C4N 43 1 N 1 A NAD 500 ? C5N ? B NAD 1 C5N 44 1 N 1 A NAD 500 ? C6N ? B NAD 1 C6N # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -11 ? A MET 1 2 1 Y 1 A GLY -10 ? A GLY 2 3 1 Y 1 A SER -9 ? A SER 3 4 1 Y 1 A ASP -8 ? A ASP 4 5 1 Y 1 A LYS -7 ? A LYS 5 6 1 Y 1 A ILE -6 ? A ILE 6 7 1 Y 1 A HIS -5 ? A HIS 7 8 1 Y 1 A HIS -4 ? A HIS 8 9 1 Y 1 A HIS -3 ? A HIS 9 10 1 Y 1 A HIS -2 ? A HIS 10 11 1 Y 1 A LYS 470 ? A LYS 482 12 1 Y 1 A LEU 471 ? A LEU 483 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 NICOTINAMIDE-ADENINE-DINUCLEOTIDE NAD 3 water HOH #