data_1WGN # _entry.id 1WGN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.355 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1WGN pdb_00001wgn 10.2210/pdb1wgn/pdb RCSB RCSB023558 ? ? WWPDB D_1000023558 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hss001003529.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1WGN _pdbx_database_status.recvd_initial_deposition_date 2004-05-28 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Zhao, C.' 1 'Tomizawa, T.' 2 'Koshiba, S.' 3 'Inoue, M.' 4 'Kigawa, T.' 5 'Yokoyama, S.' 6 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 7 # _citation.id primary _citation.title 'Solution Structure of UBA domain of Human Ubiquitin Associated Protein 1 (UBAP1)' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zhao, C.' 1 ? primary 'Tomizawa, T.' 2 ? primary 'Koshiba, S.' 3 ? primary 'Inoue, M.' 4 ? primary 'Kigawa, T.' 5 ? primary 'Yokoyama, S.' 6 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'ubiquitin associated protein' _entity.formula_weight 6814.604 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'UBA domain' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name UBAP1 # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GSSGSSGAYSELQMLSPSERQCVETVVNMGYSYECVLRAMKKKGENIEQILDYLFAHSGPSSG _entity_poly.pdbx_seq_one_letter_code_can GSSGSSGAYSELQMLSPSERQCVETVVNMGYSYECVLRAMKKKGENIEQILDYLFAHSGPSSG _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hss001003529.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 ALA n 1 9 TYR n 1 10 SER n 1 11 GLU n 1 12 LEU n 1 13 GLN n 1 14 MET n 1 15 LEU n 1 16 SER n 1 17 PRO n 1 18 SER n 1 19 GLU n 1 20 ARG n 1 21 GLN n 1 22 CYS n 1 23 VAL n 1 24 GLU n 1 25 THR n 1 26 VAL n 1 27 VAL n 1 28 ASN n 1 29 MET n 1 30 GLY n 1 31 TYR n 1 32 SER n 1 33 TYR n 1 34 GLU n 1 35 CYS n 1 36 VAL n 1 37 LEU n 1 38 ARG n 1 39 ALA n 1 40 MET n 1 41 LYS n 1 42 LYS n 1 43 LYS n 1 44 GLY n 1 45 GLU n 1 46 ASN n 1 47 ILE n 1 48 GLU n 1 49 GLN n 1 50 ILE n 1 51 LEU n 1 52 ASP n 1 53 TYR n 1 54 LEU n 1 55 PHE n 1 56 ALA n 1 57 HIS n 1 58 SER n 1 59 GLY n 1 60 PRO n 1 61 SER n 1 62 SER n 1 63 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene 'IMS cDNA STM00561' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P040301-63 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell-free synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code UBAP1_HUMAN _struct_ref.pdbx_db_accession Q9NZ09 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code AYSELQMLSPSERQCVETVVNMGYSYECVLRAMKKKGENIEQILDYLFAH _struct_ref.pdbx_align_begin 381 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1WGN _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 57 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9NZ09 _struct_ref_seq.db_align_beg 381 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 430 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 57 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1WGN GLY A 1 ? UNP Q9NZ09 ? ? 'cloning artifact' 1 1 1 1WGN SER A 2 ? UNP Q9NZ09 ? ? 'cloning artifact' 2 2 1 1WGN SER A 3 ? UNP Q9NZ09 ? ? 'cloning artifact' 3 3 1 1WGN GLY A 4 ? UNP Q9NZ09 ? ? 'cloning artifact' 4 4 1 1WGN SER A 5 ? UNP Q9NZ09 ? ? 'cloning artifact' 5 5 1 1WGN SER A 6 ? UNP Q9NZ09 ? ? 'cloning artifact' 6 6 1 1WGN GLY A 7 ? UNP Q9NZ09 ? ? 'cloning artifact' 7 7 1 1WGN SER A 58 ? UNP Q9NZ09 ? ? 'cloning artifact' 58 8 1 1WGN GLY A 59 ? UNP Q9NZ09 ? ? 'cloning artifact' 59 9 1 1WGN PRO A 60 ? UNP Q9NZ09 ? ? 'cloning artifact' 60 10 1 1WGN SER A 61 ? UNP Q9NZ09 ? ? 'cloning artifact' 61 11 1 1WGN SER A 62 ? UNP Q9NZ09 ? ? 'cloning artifact' 62 12 1 1WGN GLY A 63 ? UNP Q9NZ09 ? ? 'cloning artifact' 63 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type 1 1 1 3D_13C-separated_NOESY 2 1 1 3D_15N-separated_NOESY # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298.0 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 100mM _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '20mM d-Tris-HCl (pH7.0); 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.field_strength 800 # _pdbx_nmr_refine.entry_id 1WGN _pdbx_nmr_refine.method 'torsion angle dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 1WGN _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations, target function' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1WGN _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.classification _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal XwinNMR 2.6 collection Bruker 1 NMRPipe 20020425 processing 'Delaglio, F.' 2 NMRView 5.0.4 'data analysis' 'Johnson, B. A.' 3 KUJIRA 0.8996 'data analysis' 'Kobayashi, N.' 4 CYANA 1.0.7 'structure solution' 'Guentert, P.' 5 CYANA 1.0.7 refinement 'Guentert, P.' 6 # _exptl.entry_id 1WGN _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type ? # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _struct.entry_id 1WGN _struct.title 'Solution Structure of UBA domain of Human Ubiquitin Associated Protein 1 (UBAP1)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1WGN _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS, UNKNOWN FUNCTION' _struct_keywords.text ;Ubiquitin Associated Protein 1 (UBAP1), UBA domain, Structural genomics, RIKEN Structural Genomics/Proteomics Initiative, RSGI, UNKNOWN FUNCTION ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 10 ? GLN A 13 ? SER A 10 GLN A 13 1 ? 4 HELX_P HELX_P2 2 PRO A 17 ? GLY A 30 ? PRO A 17 GLY A 30 1 ? 14 HELX_P HELX_P3 3 TYR A 33 ? LYS A 43 ? TYR A 33 LYS A 43 1 ? 11 HELX_P HELX_P4 4 ILE A 47 ? SER A 58 ? ILE A 47 SER A 58 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _database_PDB_matrix.entry_id 1WGN _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1WGN _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 ALA 8 8 8 ALA ALA A . n A 1 9 TYR 9 9 9 TYR TYR A . n A 1 10 SER 10 10 10 SER SER A . n A 1 11 GLU 11 11 11 GLU GLU A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 GLN 13 13 13 GLN GLN A . n A 1 14 MET 14 14 14 MET MET A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 SER 16 16 16 SER SER A . n A 1 17 PRO 17 17 17 PRO PRO A . n A 1 18 SER 18 18 18 SER SER A . n A 1 19 GLU 19 19 19 GLU GLU A . n A 1 20 ARG 20 20 20 ARG ARG A . n A 1 21 GLN 21 21 21 GLN GLN A . n A 1 22 CYS 22 22 22 CYS CYS A . n A 1 23 VAL 23 23 23 VAL VAL A . n A 1 24 GLU 24 24 24 GLU GLU A . n A 1 25 THR 25 25 25 THR THR A . n A 1 26 VAL 26 26 26 VAL VAL A . n A 1 27 VAL 27 27 27 VAL VAL A . n A 1 28 ASN 28 28 28 ASN ASN A . n A 1 29 MET 29 29 29 MET MET A . n A 1 30 GLY 30 30 30 GLY GLY A . n A 1 31 TYR 31 31 31 TYR TYR A . n A 1 32 SER 32 32 32 SER SER A . n A 1 33 TYR 33 33 33 TYR TYR A . n A 1 34 GLU 34 34 34 GLU GLU A . n A 1 35 CYS 35 35 35 CYS CYS A . n A 1 36 VAL 36 36 36 VAL VAL A . n A 1 37 LEU 37 37 37 LEU LEU A . n A 1 38 ARG 38 38 38 ARG ARG A . n A 1 39 ALA 39 39 39 ALA ALA A . n A 1 40 MET 40 40 40 MET MET A . n A 1 41 LYS 41 41 41 LYS LYS A . n A 1 42 LYS 42 42 42 LYS LYS A . n A 1 43 LYS 43 43 43 LYS LYS A . n A 1 44 GLY 44 44 44 GLY GLY A . n A 1 45 GLU 45 45 45 GLU GLU A . n A 1 46 ASN 46 46 46 ASN ASN A . n A 1 47 ILE 47 47 47 ILE ILE A . n A 1 48 GLU 48 48 48 GLU GLU A . n A 1 49 GLN 49 49 49 GLN GLN A . n A 1 50 ILE 50 50 50 ILE ILE A . n A 1 51 LEU 51 51 51 LEU LEU A . n A 1 52 ASP 52 52 52 ASP ASP A . n A 1 53 TYR 53 53 53 TYR TYR A . n A 1 54 LEU 54 54 54 LEU LEU A . n A 1 55 PHE 55 55 55 PHE PHE A . n A 1 56 ALA 56 56 56 ALA ALA A . n A 1 57 HIS 57 57 57 HIS HIS A . n A 1 58 SER 58 58 58 SER SER A . n A 1 59 GLY 59 59 59 GLY GLY A . n A 1 60 PRO 60 60 60 PRO PRO A . n A 1 61 SER 61 61 61 SER SER A . n A 1 62 SER 62 62 62 SER SER A . n A 1 63 GLY 63 63 63 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-11-28 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-02 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_remark.id 650 _pdbx_database_remark.text ;HELIX AUTHOR DETERMINATION METHOD: AUTHOR DETERMINED ; # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A ALA 39 ? ? H A LYS 43 ? ? 1.55 2 1 O A VAL 23 ? ? H A VAL 27 ? ? 1.57 3 1 O A TYR 33 ? ? H A LEU 37 ? ? 1.58 4 2 O A VAL 23 ? ? H A VAL 27 ? ? 1.51 5 2 O A ALA 39 ? ? H A LYS 43 ? ? 1.53 6 3 O A TYR 33 ? ? H A LEU 37 ? ? 1.50 7 3 O A ALA 39 ? ? H A LYS 43 ? ? 1.55 8 3 O A GLN 49 ? ? H A TYR 53 ? ? 1.57 9 4 O A VAL 36 ? ? H A MET 40 ? ? 1.56 10 4 O A ALA 39 ? ? H A LYS 43 ? ? 1.56 11 4 O A PHE 55 ? ? H A GLY 59 ? ? 1.57 12 4 O A ALA 8 ? ? H A GLU 11 ? ? 1.59 13 5 O A VAL 23 ? ? H A VAL 27 ? ? 1.53 14 5 O A ALA 39 ? ? H A LYS 43 ? ? 1.53 15 5 O A VAL 36 ? ? H A MET 40 ? ? 1.55 16 5 O A TYR 33 ? ? H A LEU 37 ? ? 1.58 17 6 O A VAL 23 ? ? H A VAL 27 ? ? 1.51 18 6 O A ALA 39 ? ? H A LYS 43 ? ? 1.52 19 7 O A VAL 23 ? ? H A VAL 27 ? ? 1.50 20 7 O A TYR 33 ? ? H A LEU 37 ? ? 1.57 21 7 O A ALA 39 ? ? H A LYS 43 ? ? 1.58 22 8 O A GLN 49 ? ? H A TYR 53 ? ? 1.52 23 8 O A ALA 39 ? ? H A LYS 43 ? ? 1.54 24 8 O A VAL 23 ? ? H A VAL 27 ? ? 1.54 25 8 O A GLU 48 ? ? H A ASP 52 ? ? 1.56 26 8 O A TYR 33 ? ? H A LEU 37 ? ? 1.57 27 9 O A VAL 23 ? ? H A VAL 27 ? ? 1.52 28 9 O A ILE 47 ? ? H A LEU 51 ? ? 1.53 29 9 O A ALA 39 ? ? H A LYS 43 ? ? 1.53 30 9 O A GLY 30 ? ? HG A SER 61 ? ? 1.54 31 9 O A CYS 35 ? ? H A ALA 39 ? ? 1.58 32 10 O A VAL 23 ? ? H A VAL 27 ? ? 1.53 33 10 O A ALA 39 ? ? H A LYS 43 ? ? 1.53 34 10 O A LEU 51 ? ? H A PHE 55 ? ? 1.58 35 11 O A ALA 39 ? ? H A LYS 43 ? ? 1.54 36 11 O A VAL 36 ? ? H A MET 40 ? ? 1.56 37 11 O A VAL 23 ? ? H A VAL 27 ? ? 1.58 38 11 O A LEU 51 ? ? H A PHE 55 ? ? 1.60 39 12 O A ALA 39 ? ? H A LYS 43 ? ? 1.53 40 12 O A CYS 35 ? ? H A ALA 39 ? ? 1.58 41 12 O A LEU 51 ? ? H A PHE 55 ? ? 1.59 42 12 O A TYR 33 ? ? H A LEU 37 ? ? 1.60 43 13 O A TYR 33 ? ? H A LEU 37 ? ? 1.52 44 13 O A ALA 39 ? ? H A LYS 43 ? ? 1.54 45 14 O A VAL 23 ? ? H A VAL 27 ? ? 1.51 46 14 O A TYR 33 ? ? H A LEU 37 ? ? 1.52 47 14 O A VAL 36 ? ? H A MET 40 ? ? 1.56 48 14 O A ILE 47 ? ? H A LEU 51 ? ? 1.56 49 14 O A ALA 39 ? ? H A LYS 43 ? ? 1.57 50 15 O A TYR 33 ? ? H A LEU 37 ? ? 1.50 51 15 O A VAL 36 ? ? H A MET 40 ? ? 1.50 52 15 O A GLN 49 ? ? H A TYR 53 ? ? 1.54 53 15 O A VAL 23 ? ? H A VAL 27 ? ? 1.55 54 16 O A VAL 23 ? ? H A VAL 27 ? ? 1.52 55 16 O A CYS 35 ? ? H A ALA 39 ? ? 1.57 56 16 O A ILE 47 ? ? H A LEU 51 ? ? 1.58 57 16 O A TYR 33 ? ? H A LEU 37 ? ? 1.59 58 17 O A TYR 33 ? ? H A LEU 37 ? ? 1.51 59 17 O A ALA 39 ? ? H A LYS 43 ? ? 1.53 60 17 O A ILE 47 ? ? H A LEU 51 ? ? 1.56 61 17 O A GLU 19 ? ? H A VAL 23 ? ? 1.56 62 18 O A VAL 23 ? ? H A VAL 27 ? ? 1.56 63 19 O A TYR 33 ? ? H A LEU 37 ? ? 1.51 64 19 O A ALA 39 ? ? H A LYS 43 ? ? 1.53 65 19 O A VAL 23 ? ? H A VAL 27 ? ? 1.59 66 20 O A GLN 49 ? ? H A TYR 53 ? ? 1.52 67 20 O A ILE 50 ? ? H A LEU 54 ? ? 1.58 68 20 O A VAL 23 ? ? H A VAL 27 ? ? 1.60 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 2 ? ? -173.88 145.20 2 1 SER A 3 ? ? -172.91 -58.53 3 1 ALA A 8 ? ? -100.55 -60.46 4 1 LEU A 15 ? ? -57.46 -176.95 5 1 ASN A 46 ? ? 176.83 93.41 6 1 SER A 58 ? ? -57.50 170.34 7 1 SER A 61 ? ? -153.58 88.10 8 2 SER A 2 ? ? -139.24 -58.53 9 2 SER A 6 ? ? 63.24 105.06 10 2 LEU A 15 ? ? -57.20 -176.29 11 2 LYS A 42 ? ? -90.74 -62.73 12 2 ASN A 46 ? ? -179.55 92.39 13 2 SER A 61 ? ? 60.31 96.36 14 3 LEU A 15 ? ? -55.93 -175.89 15 3 LYS A 42 ? ? -98.68 -61.66 16 3 ASN A 46 ? ? -178.40 106.74 17 4 SER A 2 ? ? -172.28 -58.50 18 4 SER A 3 ? ? -39.54 137.45 19 4 MET A 14 ? ? -119.99 65.92 20 4 LEU A 15 ? ? -57.27 -174.93 21 4 LYS A 42 ? ? -91.21 -62.77 22 4 ASN A 46 ? ? -176.89 97.37 23 5 SER A 2 ? ? -159.69 79.35 24 5 LEU A 15 ? ? -51.72 -178.60 25 5 LYS A 42 ? ? -99.25 -61.96 26 5 ASN A 46 ? ? -177.86 105.79 27 5 SER A 62 ? ? -178.36 -58.61 28 6 SER A 3 ? ? -154.63 -58.75 29 6 SER A 5 ? ? -153.03 79.08 30 6 SER A 6 ? ? 44.63 82.52 31 6 ALA A 8 ? ? -156.15 -58.19 32 6 LEU A 15 ? ? -54.81 -174.94 33 6 ASN A 46 ? ? 178.45 100.86 34 6 SER A 58 ? ? 44.07 93.16 35 7 SER A 2 ? ? 49.35 91.22 36 7 LEU A 15 ? ? -53.47 -175.73 37 7 ASN A 46 ? ? 177.65 92.29 38 7 SER A 58 ? ? 64.24 -78.71 39 7 SER A 61 ? ? 84.71 -59.87 40 8 SER A 6 ? ? 65.20 81.94 41 8 ALA A 8 ? ? 78.77 -60.73 42 8 LEU A 15 ? ? -54.16 -174.17 43 8 LYS A 42 ? ? -91.98 -62.75 44 8 ASN A 46 ? ? -171.43 92.86 45 8 SER A 58 ? ? 62.23 94.67 46 9 SER A 2 ? ? -123.16 -58.29 47 9 MET A 14 ? ? -117.37 65.82 48 9 LEU A 15 ? ? -56.86 -173.30 49 9 LYS A 42 ? ? -92.13 -62.69 50 9 ASN A 46 ? ? 176.61 100.35 51 9 SER A 58 ? ? 65.66 164.84 52 10 SER A 2 ? ? -176.89 134.24 53 10 SER A 3 ? ? 177.99 124.10 54 10 SER A 5 ? ? -119.38 78.10 55 10 SER A 6 ? ? 56.41 102.39 56 10 LEU A 15 ? ? -52.32 -176.63 57 10 LYS A 42 ? ? -97.84 -62.63 58 10 ASN A 46 ? ? -177.45 108.58 59 10 SER A 61 ? ? -133.62 -55.37 60 11 SER A 2 ? ? -153.20 85.04 61 11 LEU A 15 ? ? -54.84 -174.89 62 11 ASN A 46 ? ? 177.02 96.11 63 11 SER A 58 ? ? 60.95 151.17 64 11 SER A 62 ? ? 72.66 -59.48 65 12 SER A 3 ? ? 43.99 82.26 66 12 SER A 5 ? ? -100.92 79.07 67 12 LEU A 15 ? ? -51.85 -177.50 68 12 VAL A 23 ? ? -54.51 -72.14 69 12 THR A 25 ? ? -43.08 -73.50 70 12 LEU A 37 ? ? -54.35 -74.46 71 12 LYS A 42 ? ? -92.26 -62.81 72 12 ASN A 46 ? ? 176.48 102.03 73 12 SER A 58 ? ? 63.18 126.78 74 12 SER A 61 ? ? 56.15 94.96 75 13 SER A 2 ? ? -165.42 -58.35 76 13 SER A 5 ? ? -152.14 -53.48 77 13 LEU A 15 ? ? -53.50 -174.58 78 13 LYS A 42 ? ? -100.81 -61.18 79 13 ASN A 46 ? ? -177.54 110.84 80 13 SER A 61 ? ? 61.94 146.11 81 14 SER A 3 ? ? 60.21 93.25 82 14 SER A 5 ? ? 60.36 74.70 83 14 SER A 6 ? ? 63.03 145.64 84 14 LEU A 15 ? ? -50.74 179.74 85 14 LEU A 37 ? ? -45.88 -74.34 86 14 LYS A 42 ? ? -91.50 -62.81 87 14 ASN A 46 ? ? 179.66 102.14 88 14 SER A 58 ? ? 68.71 132.01 89 14 SER A 62 ? ? -172.04 -58.45 90 15 SER A 2 ? ? 58.01 159.94 91 15 SER A 5 ? ? 67.11 -72.06 92 15 SER A 6 ? ? -170.31 96.45 93 15 ALA A 8 ? ? 62.60 154.10 94 15 LEU A 15 ? ? -50.56 179.53 95 15 LEU A 37 ? ? -44.04 -72.19 96 15 ASN A 46 ? ? -173.41 90.47 97 15 SER A 58 ? ? 47.92 84.08 98 16 SER A 6 ? ? -165.36 -56.57 99 16 LEU A 15 ? ? -57.48 -175.57 100 16 LYS A 42 ? ? -90.72 -62.86 101 16 ASN A 46 ? ? -173.37 97.89 102 17 SER A 2 ? ? 60.03 159.09 103 17 MET A 14 ? ? -117.65 65.89 104 17 LEU A 15 ? ? -56.37 179.72 105 17 TYR A 33 ? ? -37.48 -71.57 106 17 LYS A 42 ? ? -92.16 -62.76 107 17 ASN A 46 ? ? 176.06 93.29 108 17 SER A 61 ? ? 48.85 87.72 109 17 SER A 62 ? ? 48.94 87.91 110 18 SER A 6 ? ? -151.80 -61.50 111 18 LEU A 15 ? ? -53.55 -173.22 112 18 ASN A 46 ? ? -174.92 94.89 113 18 GLU A 48 ? ? -54.54 -71.32 114 19 SER A 2 ? ? 64.13 165.77 115 19 SER A 3 ? ? -138.60 -47.22 116 19 SER A 5 ? ? -156.10 -58.66 117 19 ALA A 8 ? ? -176.63 -59.55 118 19 LEU A 15 ? ? -57.15 -175.34 119 19 TYR A 33 ? ? -37.48 -70.78 120 19 LYS A 42 ? ? -98.30 -61.34 121 19 ASN A 46 ? ? -179.34 107.72 122 19 SER A 62 ? ? 68.80 89.07 123 20 SER A 2 ? ? 179.05 113.48 124 20 SER A 3 ? ? -177.24 106.43 125 20 MET A 14 ? ? -118.00 66.34 126 20 LEU A 15 ? ? -56.59 -173.64 127 20 VAL A 23 ? ? -58.11 -72.08 128 20 ASN A 46 ? ? -177.07 89.71 129 20 SER A 58 ? ? 61.44 140.88 #