data_1XER # _entry.id 1XER # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1XER WWPDB D_1000177255 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1XER _pdbx_database_status.recvd_initial_deposition_date 1996-08-28 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Fujii, T.' 1 'Hata, Y.' 2 'Moriyama, H.' 3 'Wakagi, T.' 4 'Tanaka, N.' 5 'Oshima, T.' 6 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Novel zinc-binding centre in thermoacidophilic archaeal ferredoxins.' Nat.Struct.Biol. 3 834 837 1996 NSBIEW US 1072-8368 2024 ? 8836097 10.1038/nsb1096-834 1 'Crystallization and Preliminary X-Ray Studies on Sulfolobus Acidocaldarius Ferredoxin' 'J.Biochem.(Tokyo)' 110 472 ? 1991 JOBIAO JA 0021-924X 0418 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Fujii, T.' 1 primary 'Hata, Y.' 2 primary 'Wakagi, T.' 3 primary 'Tanaka, N.' 4 primary 'Oshima, T.' 5 1 'Fujii, T.' 6 1 'Moriyama, H.' 7 1 'Takenaka, A.' 8 1 'Tanaka, N.' 9 1 'Wakagi, T.' 10 1 'Oshima, T.' 11 # _cell.entry_id 1XER _cell.length_a 50.120 _cell.length_b 50.120 _cell.length_c 69.520 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1XER _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat FERREDOXIN 11026.577 1 ? ? ? ? 2 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? 3 non-polymer syn 'FE3-S4 CLUSTER' 295.795 2 ? ? ? ? 4 water nat water 18.015 31 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GIDPNYRTNRQVVGEHSGHKVYGPVEPP(MLZ)VLGIHGTIVGVDFDLCIADGSCINACPVNVFQWYDTPGHPASEKKAD PVNEQACIFCMACVNVCPVAAIDVKPP ; _entity_poly.pdbx_seq_one_letter_code_can ;GIDPNYRTNRQVVGEHSGHKVYGPVEPPKVLGIHGTIVGVDFDLCIADGSCINACPVNVFQWYDTPGHPASEKKADPVNE QACIFCMACVNVCPVAAIDVKPP ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ILE n 1 3 ASP n 1 4 PRO n 1 5 ASN n 1 6 TYR n 1 7 ARG n 1 8 THR n 1 9 ASN n 1 10 ARG n 1 11 GLN n 1 12 VAL n 1 13 VAL n 1 14 GLY n 1 15 GLU n 1 16 HIS n 1 17 SER n 1 18 GLY n 1 19 HIS n 1 20 LYS n 1 21 VAL n 1 22 TYR n 1 23 GLY n 1 24 PRO n 1 25 VAL n 1 26 GLU n 1 27 PRO n 1 28 PRO n 1 29 MLZ n 1 30 VAL n 1 31 LEU n 1 32 GLY n 1 33 ILE n 1 34 HIS n 1 35 GLY n 1 36 THR n 1 37 ILE n 1 38 VAL n 1 39 GLY n 1 40 VAL n 1 41 ASP n 1 42 PHE n 1 43 ASP n 1 44 LEU n 1 45 CYS n 1 46 ILE n 1 47 ALA n 1 48 ASP n 1 49 GLY n 1 50 SER n 1 51 CYS n 1 52 ILE n 1 53 ASN n 1 54 ALA n 1 55 CYS n 1 56 PRO n 1 57 VAL n 1 58 ASN n 1 59 VAL n 1 60 PHE n 1 61 GLN n 1 62 TRP n 1 63 TYR n 1 64 ASP n 1 65 THR n 1 66 PRO n 1 67 GLY n 1 68 HIS n 1 69 PRO n 1 70 ALA n 1 71 SER n 1 72 GLU n 1 73 LYS n 1 74 LYS n 1 75 ALA n 1 76 ASP n 1 77 PRO n 1 78 VAL n 1 79 ASN n 1 80 GLU n 1 81 GLN n 1 82 ALA n 1 83 CYS n 1 84 ILE n 1 85 PHE n 1 86 CYS n 1 87 MET n 1 88 ALA n 1 89 CYS n 1 90 VAL n 1 91 ASN n 1 92 VAL n 1 93 CYS n 1 94 PRO n 1 95 VAL n 1 96 ALA n 1 97 ALA n 1 98 ILE n 1 99 ASP n 1 100 VAL n 1 101 LYS n 1 102 PRO n 1 103 PRO n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'Sulfolobus tokodaii str. 7' _entity_src_nat.pdbx_ncbi_taxonomy_id 273063 _entity_src_nat.genus Sulfolobus _entity_src_nat.species 'Sulfolobus tokodaii' _entity_src_nat.strain 'STRAIN 7' _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code FER1_SULTO _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P55907 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ;MGIDPNYRTNRQVVGEHSGHKVYGPVEPPKVLGIHGTIVGVDFDLCIADGSCINACPVNVFQWYDTPGHPASEKKADPVN EQACIFCMACVNVCPVAAIDVKPP ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1XER _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 103 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P55907 _struct_ref_seq.db_align_beg 2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 104 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 103 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 1XER _struct_ref_seq_dif.mon_id MLZ _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 29 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P55907 _struct_ref_seq_dif.db_mon_id LYS _struct_ref_seq_dif.pdbx_seq_db_seq_num 30 _struct_ref_seq_dif.details 'MODIFIED RESIDUE' _struct_ref_seq_dif.pdbx_auth_seq_num 29 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 F3S non-polymer . 'FE3-S4 CLUSTER' ? 'Fe3 S4' 295.795 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MLZ 'L-peptide linking' n N-METHYL-LYSINE ? 'C7 H16 N2 O2' 160.214 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.entry_id 1XER _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.88 _exptl_crystal.density_percent_sol 33. _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp 293 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type RIGAKU _diffrn_detector.pdbx_collection_date 1992-10-24 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'NI FILTER' _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RUH2R' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1XER _reflns.observed_criterion_sigma_I 3. _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 35.59 _reflns.d_resolution_high 1.71 _reflns.number_obs 8689 _reflns.number_all ? _reflns.percent_possible_obs 86.0 _reflns.pdbx_Rmerge_I_obs 0.071 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 11.0 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 1XER _refine.ls_number_reflns_obs 5008 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 3.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 8.0 _refine.ls_d_res_high 2.0 _refine.ls_percent_reflns_obs 89.9 _refine.ls_R_factor_obs 0.173 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.173 _refine.ls_R_factor_R_free 0.244 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10. _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 13.6 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MIRAS _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1XER _refine_analyze.Luzzati_coordinate_error_obs 0.25 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 772 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 15 _refine_hist.number_atoms_solvent 31 _refine_hist.number_atoms_total 818 _refine_hist.d_res_high 2.0 _refine_hist.d_res_low 8.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.011 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.742 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d 26.89 ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d 1.414 ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 2.0 _refine_ls_shell.d_res_low 2.09 _refine_ls_shell.number_reflns_R_work 555 _refine_ls_shell.R_factor_R_work 0.22 _refine_ls_shell.percent_reflns_obs 73.8 _refine_ls_shell.R_factor_R_free 0.229 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free 10. _refine_ls_shell.number_reflns_R_free 71 _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 1XER _struct.title 'STRUCTURE OF FERREDOXIN' _struct.pdbx_descriptor 'FERREDOXIN, FE3-S4 CLUSTER' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1XER _struct_keywords.pdbx_keywords 'ELECTRON TRANSPORT' _struct_keywords.text 'ELECTRON TRANSPORT, IRON-SULFUR, DUPLICATION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 TYR A 6 ? ASN A 9 ? TYR A 6 ASN A 9 1 ? 4 HELX_P HELX_P2 2 SER A 50 ? ALA A 54 ? SER A 50 ALA A 54 1 ? 5 HELX_P HELX_P3 3 GLU A 80 ? ALA A 82 ? GLU A 80 ALA A 82 5 ? 3 HELX_P HELX_P4 4 ALA A 88 ? VAL A 92 ? ALA A 88 VAL A 92 1 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A MLZ 29 N ? ? ? 1_555 A PRO 28 C ? ? A MLZ 29 A PRO 28 1_555 ? ? ? ? ? ? ? 1.322 ? covale2 covale ? ? A MLZ 29 C ? ? ? 1_555 A VAL 30 N ? ? A MLZ 29 A VAL 30 1_555 ? ? ? ? ? ? ? 1.327 ? metalc1 metalc ? ? C F3S . FE1 ? ? ? 1_555 A CYS 45 SG ? ? A F3S 104 A CYS 45 1_555 ? ? ? ? ? ? ? 2.279 ? metalc2 metalc ? ? C F3S . FE3 ? ? ? 1_555 A CYS 93 SG ? ? A F3S 104 A CYS 93 1_555 ? ? ? ? ? ? ? 2.295 ? metalc3 metalc ? ? D F3S . FE1 ? ? ? 1_555 A CYS 83 SG ? ? A F3S 105 A CYS 83 1_555 ? ? ? ? ? ? ? 2.311 ? metalc4 metalc ? ? D F3S . FE3 ? ? ? 1_555 A CYS 55 SG ? ? A F3S 105 A CYS 55 1_555 ? ? ? ? ? ? ? 2.312 ? metalc5 metalc ? ? B ZN . ZN ? ? ? 1_555 A HIS 16 ND1 ? ? A ZN 106 A HIS 16 1_555 ? ? ? ? ? ? ? 2.069 ? metalc6 metalc ? ? B ZN . ZN ? ? ? 1_555 A HIS 19 NE2 ? ? A ZN 106 A HIS 19 1_555 ? ? ? ? ? ? ? 1.950 ? metalc7 metalc ? ? B ZN . ZN ? ? ? 1_555 A HIS 34 ND1 ? ? A ZN 106 A HIS 34 1_555 ? ? ? ? ? ? ? 1.964 ? metalc8 metalc ? ? B ZN . ZN ? ? ? 1_555 A ASP 76 OD1 ? ? A ZN 106 A ASP 76 1_555 ? ? ? ? ? ? ? 1.852 ? metalc9 metalc ? ? A CYS 51 SG ? ? ? 1_555 C F3S . FE4 ? ? A CYS 51 A F3S 104 1_555 ? ? ? ? ? ? ? 2.299 ? metalc10 metalc ? ? A CYS 89 SG ? ? ? 1_555 D F3S . FE4 ? ? A CYS 89 A F3S 105 1_555 ? ? ? ? ? ? ? 2.308 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLY 23 A . ? GLY 23 A PRO 24 A ? PRO 24 A 1 0.05 2 PRO 27 A . ? PRO 27 A PRO 28 A ? PRO 28 A 1 0.23 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 38 ? VAL A 40 ? VAL A 38 VAL A 40 A 2 ILE A 98 ? VAL A 100 ? ILE A 98 VAL A 100 B 1 GLN A 61 ? ASP A 64 ? GLN A 61 ASP A 64 B 2 LYS A 73 ? ASP A 76 ? LYS A 73 ASP A 76 C 1 VAL A 12 ? HIS A 16 ? VAL A 12 HIS A 16 C 2 HIS A 19 ? TYR A 22 ? HIS A 19 TYR A 22 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O GLY A 39 ? O GLY A 39 N ASP A 99 ? N ASP A 99 B 1 2 O GLN A 61 ? O GLN A 61 N ASP A 76 ? N ASP A 76 C 1 2 O VAL A 13 ? O VAL A 13 N VAL A 21 ? N VAL A 21 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE ZN A 106' AC2 Software ? ? ? ? 10 'BINDING SITE FOR RESIDUE F3S A 104' AC3 Software ? ? ? ? 9 'BINDING SITE FOR RESIDUE F3S A 105' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 HIS A 16 ? HIS A 16 . ? 1_555 ? 2 AC1 4 HIS A 19 ? HIS A 19 . ? 1_555 ? 3 AC1 4 HIS A 34 ? HIS A 34 . ? 1_555 ? 4 AC1 4 ASP A 76 ? ASP A 76 . ? 1_555 ? 5 AC2 10 CYS A 45 ? CYS A 45 . ? 1_555 ? 6 AC2 10 ILE A 46 ? ILE A 46 . ? 1_555 ? 7 AC2 10 ALA A 47 ? ALA A 47 . ? 1_555 ? 8 AC2 10 ASP A 48 ? ASP A 48 . ? 1_555 ? 9 AC2 10 GLY A 49 ? GLY A 49 . ? 1_555 ? 10 AC2 10 SER A 50 ? SER A 50 . ? 1_555 ? 11 AC2 10 CYS A 51 ? CYS A 51 . ? 1_555 ? 12 AC2 10 TRP A 62 ? TRP A 62 . ? 1_555 ? 13 AC2 10 CYS A 93 ? CYS A 93 . ? 1_555 ? 14 AC2 10 ILE A 98 ? ILE A 98 . ? 1_555 ? 15 AC3 9 CYS A 55 ? CYS A 55 . ? 1_555 ? 16 AC3 9 VAL A 57 ? VAL A 57 . ? 1_555 ? 17 AC3 9 VAL A 59 ? VAL A 59 . ? 1_555 ? 18 AC3 9 PHE A 60 ? PHE A 60 . ? 1_555 ? 19 AC3 9 CYS A 83 ? CYS A 83 . ? 1_555 ? 20 AC3 9 ILE A 84 ? ILE A 84 . ? 1_555 ? 21 AC3 9 CYS A 86 ? CYS A 86 . ? 1_555 ? 22 AC3 9 MET A 87 ? MET A 87 . ? 1_555 ? 23 AC3 9 CYS A 89 ? CYS A 89 . ? 1_555 ? # _database_PDB_matrix.entry_id 1XER _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1XER _atom_sites.fract_transf_matrix[1][1] 0.019952 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019952 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014384 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C FE N O S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 ILE 2 2 2 ILE ILE A . n A 1 3 ASP 3 3 3 ASP ASP A . n A 1 4 PRO 4 4 4 PRO PRO A . n A 1 5 ASN 5 5 5 ASN ASN A . n A 1 6 TYR 6 6 6 TYR TYR A . n A 1 7 ARG 7 7 7 ARG ARG A . n A 1 8 THR 8 8 8 THR THR A . n A 1 9 ASN 9 9 9 ASN ASN A . n A 1 10 ARG 10 10 10 ARG ARG A . n A 1 11 GLN 11 11 11 GLN GLN A . n A 1 12 VAL 12 12 12 VAL VAL A . n A 1 13 VAL 13 13 13 VAL VAL A . n A 1 14 GLY 14 14 14 GLY GLY A . n A 1 15 GLU 15 15 15 GLU GLU A . n A 1 16 HIS 16 16 16 HIS HIS A . n A 1 17 SER 17 17 17 SER SER A . n A 1 18 GLY 18 18 18 GLY GLY A . n A 1 19 HIS 19 19 19 HIS HIS A . n A 1 20 LYS 20 20 20 LYS LYS A . n A 1 21 VAL 21 21 21 VAL VAL A . n A 1 22 TYR 22 22 22 TYR TYR A . n A 1 23 GLY 23 23 23 GLY GLY A . n A 1 24 PRO 24 24 24 PRO PRO A . n A 1 25 VAL 25 25 25 VAL VAL A . n A 1 26 GLU 26 26 26 GLU GLU A . n A 1 27 PRO 27 27 27 PRO PRO A . n A 1 28 PRO 28 28 28 PRO PRO A . n A 1 29 MLZ 29 29 29 MLZ MLZ A . n A 1 30 VAL 30 30 30 VAL VAL A . n A 1 31 LEU 31 31 31 LEU LEU A . n A 1 32 GLY 32 32 32 GLY GLY A . n A 1 33 ILE 33 33 33 ILE ILE A . n A 1 34 HIS 34 34 34 HIS HIS A . n A 1 35 GLY 35 35 35 GLY GLY A . n A 1 36 THR 36 36 36 THR THR A . n A 1 37 ILE 37 37 37 ILE ILE A . n A 1 38 VAL 38 38 38 VAL VAL A . n A 1 39 GLY 39 39 39 GLY GLY A . n A 1 40 VAL 40 40 40 VAL VAL A . n A 1 41 ASP 41 41 41 ASP ASP A . n A 1 42 PHE 42 42 42 PHE PHE A . n A 1 43 ASP 43 43 43 ASP ASP A . n A 1 44 LEU 44 44 44 LEU LEU A . n A 1 45 CYS 45 45 45 CYS CYS A . n A 1 46 ILE 46 46 46 ILE ILE A . n A 1 47 ALA 47 47 47 ALA ALA A . n A 1 48 ASP 48 48 48 ASP ASP A . n A 1 49 GLY 49 49 49 GLY GLY A . n A 1 50 SER 50 50 50 SER SER A . n A 1 51 CYS 51 51 51 CYS CYS A . n A 1 52 ILE 52 52 52 ILE ILE A . n A 1 53 ASN 53 53 53 ASN ASN A . n A 1 54 ALA 54 54 54 ALA ALA A . n A 1 55 CYS 55 55 55 CYS CYS A . n A 1 56 PRO 56 56 56 PRO PRO A . n A 1 57 VAL 57 57 57 VAL VAL A . n A 1 58 ASN 58 58 58 ASN ASN A . n A 1 59 VAL 59 59 59 VAL VAL A . n A 1 60 PHE 60 60 60 PHE PHE A . n A 1 61 GLN 61 61 61 GLN GLN A . n A 1 62 TRP 62 62 62 TRP TRP A . n A 1 63 TYR 63 63 63 TYR TYR A . n A 1 64 ASP 64 64 64 ASP ASP A . n A 1 65 THR 65 65 65 THR THR A . n A 1 66 PRO 66 66 66 PRO PRO A . n A 1 67 GLY 67 67 67 GLY GLY A . n A 1 68 HIS 68 68 68 HIS HIS A . n A 1 69 PRO 69 69 69 PRO PRO A . n A 1 70 ALA 70 70 70 ALA ALA A . n A 1 71 SER 71 71 71 SER SER A . n A 1 72 GLU 72 72 72 GLU GLU A . n A 1 73 LYS 73 73 73 LYS LYS A . n A 1 74 LYS 74 74 74 LYS LYS A . n A 1 75 ALA 75 75 75 ALA ALA A . n A 1 76 ASP 76 76 76 ASP ASP A . n A 1 77 PRO 77 77 77 PRO PRO A . n A 1 78 VAL 78 78 78 VAL VAL A . n A 1 79 ASN 79 79 79 ASN ASN A . n A 1 80 GLU 80 80 80 GLU GLU A . n A 1 81 GLN 81 81 81 GLN GLN A . n A 1 82 ALA 82 82 82 ALA ALA A . n A 1 83 CYS 83 83 83 CYS CYS A . n A 1 84 ILE 84 84 84 ILE ILE A . n A 1 85 PHE 85 85 85 PHE PHE A . n A 1 86 CYS 86 86 86 CYS CYS A . n A 1 87 MET 87 87 87 MET MET A . n A 1 88 ALA 88 88 88 ALA ALA A . n A 1 89 CYS 89 89 89 CYS CYS A . n A 1 90 VAL 90 90 90 VAL VAL A . n A 1 91 ASN 91 91 91 ASN ASN A . n A 1 92 VAL 92 92 92 VAL VAL A . n A 1 93 CYS 93 93 93 CYS CYS A . n A 1 94 PRO 94 94 94 PRO PRO A . n A 1 95 VAL 95 95 95 VAL VAL A . n A 1 96 ALA 96 96 96 ALA ALA A . n A 1 97 ALA 97 97 97 ALA ALA A . n A 1 98 ILE 98 98 98 ILE ILE A . n A 1 99 ASP 99 99 99 ASP ASP A . n A 1 100 VAL 100 100 100 VAL VAL A . n A 1 101 LYS 101 101 101 LYS LYS A . n A 1 102 PRO 102 102 102 PRO PRO A . n A 1 103 PRO 103 103 103 PRO PRO A . n # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id MLZ _pdbx_struct_mod_residue.label_seq_id 29 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id MLZ _pdbx_struct_mod_residue.auth_seq_id 29 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id LYS _pdbx_struct_mod_residue.details N-METHYL-LYSINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 7_556 y,x,-z+1 0.0000000000 1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 69.5200000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 45 ? A CYS 45 ? 1_555 FE1 ? C F3S . ? A F3S 104 ? 1_555 S1 ? C F3S . ? A F3S 104 ? 1_555 112.6 ? 2 SG ? A CYS 45 ? A CYS 45 ? 1_555 FE1 ? C F3S . ? A F3S 104 ? 1_555 S2 ? C F3S . ? A F3S 104 ? 1_555 107.8 ? 3 S1 ? C F3S . ? A F3S 104 ? 1_555 FE1 ? C F3S . ? A F3S 104 ? 1_555 S2 ? C F3S . ? A F3S 104 ? 1_555 106.9 ? 4 SG ? A CYS 45 ? A CYS 45 ? 1_555 FE1 ? C F3S . ? A F3S 104 ? 1_555 S3 ? C F3S . ? A F3S 104 ? 1_555 114.6 ? 5 S1 ? C F3S . ? A F3S 104 ? 1_555 FE1 ? C F3S . ? A F3S 104 ? 1_555 S3 ? C F3S . ? A F3S 104 ? 1_555 107.0 ? 6 S2 ? C F3S . ? A F3S 104 ? 1_555 FE1 ? C F3S . ? A F3S 104 ? 1_555 S3 ? C F3S . ? A F3S 104 ? 1_555 107.5 ? 7 SG ? A CYS 93 ? A CYS 93 ? 1_555 FE3 ? C F3S . ? A F3S 104 ? 1_555 S1 ? C F3S . ? A F3S 104 ? 1_555 110.5 ? 8 SG ? A CYS 93 ? A CYS 93 ? 1_555 FE3 ? C F3S . ? A F3S 104 ? 1_555 S3 ? C F3S . ? A F3S 104 ? 1_555 110.4 ? 9 S1 ? C F3S . ? A F3S 104 ? 1_555 FE3 ? C F3S . ? A F3S 104 ? 1_555 S3 ? C F3S . ? A F3S 104 ? 1_555 106.9 ? 10 SG ? A CYS 93 ? A CYS 93 ? 1_555 FE3 ? C F3S . ? A F3S 104 ? 1_555 S4 ? C F3S . ? A F3S 104 ? 1_555 111.8 ? 11 S1 ? C F3S . ? A F3S 104 ? 1_555 FE3 ? C F3S . ? A F3S 104 ? 1_555 S4 ? C F3S . ? A F3S 104 ? 1_555 110.0 ? 12 S3 ? C F3S . ? A F3S 104 ? 1_555 FE3 ? C F3S . ? A F3S 104 ? 1_555 S4 ? C F3S . ? A F3S 104 ? 1_555 107.1 ? 13 SG ? A CYS 83 ? A CYS 83 ? 1_555 FE1 ? D F3S . ? A F3S 105 ? 1_555 S1 ? D F3S . ? A F3S 105 ? 1_555 114.9 ? 14 SG ? A CYS 83 ? A CYS 83 ? 1_555 FE1 ? D F3S . ? A F3S 105 ? 1_555 S2 ? D F3S . ? A F3S 105 ? 1_555 105.2 ? 15 S1 ? D F3S . ? A F3S 105 ? 1_555 FE1 ? D F3S . ? A F3S 105 ? 1_555 S2 ? D F3S . ? A F3S 105 ? 1_555 106.4 ? 16 SG ? A CYS 83 ? A CYS 83 ? 1_555 FE1 ? D F3S . ? A F3S 105 ? 1_555 S3 ? D F3S . ? A F3S 105 ? 1_555 117.3 ? 17 S1 ? D F3S . ? A F3S 105 ? 1_555 FE1 ? D F3S . ? A F3S 105 ? 1_555 S3 ? D F3S . ? A F3S 105 ? 1_555 104.7 ? 18 S2 ? D F3S . ? A F3S 105 ? 1_555 FE1 ? D F3S . ? A F3S 105 ? 1_555 S3 ? D F3S . ? A F3S 105 ? 1_555 107.8 ? 19 SG ? A CYS 55 ? A CYS 55 ? 1_555 FE3 ? D F3S . ? A F3S 105 ? 1_555 S1 ? D F3S . ? A F3S 105 ? 1_555 112.3 ? 20 SG ? A CYS 55 ? A CYS 55 ? 1_555 FE3 ? D F3S . ? A F3S 105 ? 1_555 S3 ? D F3S . ? A F3S 105 ? 1_555 110.8 ? 21 S1 ? D F3S . ? A F3S 105 ? 1_555 FE3 ? D F3S . ? A F3S 105 ? 1_555 S3 ? D F3S . ? A F3S 105 ? 1_555 104.6 ? 22 SG ? A CYS 55 ? A CYS 55 ? 1_555 FE3 ? D F3S . ? A F3S 105 ? 1_555 S4 ? D F3S . ? A F3S 105 ? 1_555 111.8 ? 23 S1 ? D F3S . ? A F3S 105 ? 1_555 FE3 ? D F3S . ? A F3S 105 ? 1_555 S4 ? D F3S . ? A F3S 105 ? 1_555 109.6 ? 24 S3 ? D F3S . ? A F3S 105 ? 1_555 FE3 ? D F3S . ? A F3S 105 ? 1_555 S4 ? D F3S . ? A F3S 105 ? 1_555 107.3 ? 25 ND1 ? A HIS 16 ? A HIS 16 ? 1_555 ZN ? B ZN . ? A ZN 106 ? 1_555 NE2 ? A HIS 19 ? A HIS 19 ? 1_555 110.7 ? 26 ND1 ? A HIS 16 ? A HIS 16 ? 1_555 ZN ? B ZN . ? A ZN 106 ? 1_555 ND1 ? A HIS 34 ? A HIS 34 ? 1_555 105.1 ? 27 NE2 ? A HIS 19 ? A HIS 19 ? 1_555 ZN ? B ZN . ? A ZN 106 ? 1_555 ND1 ? A HIS 34 ? A HIS 34 ? 1_555 109.1 ? 28 ND1 ? A HIS 16 ? A HIS 16 ? 1_555 ZN ? B ZN . ? A ZN 106 ? 1_555 OD1 ? A ASP 76 ? A ASP 76 ? 1_555 112.0 ? 29 NE2 ? A HIS 19 ? A HIS 19 ? 1_555 ZN ? B ZN . ? A ZN 106 ? 1_555 OD1 ? A ASP 76 ? A ASP 76 ? 1_555 114.1 ? 30 ND1 ? A HIS 34 ? A HIS 34 ? 1_555 ZN ? B ZN . ? A ZN 106 ? 1_555 OD1 ? A ASP 76 ? A ASP 76 ? 1_555 105.3 ? 31 SG ? A CYS 51 ? A CYS 51 ? 1_555 FE4 ? C F3S . ? A F3S 104 ? 1_555 S2 ? C F3S . ? A F3S 104 ? 1_555 108.5 ? 32 SG ? A CYS 51 ? A CYS 51 ? 1_555 FE4 ? C F3S . ? A F3S 104 ? 1_555 S3 ? C F3S . ? A F3S 104 ? 1_555 116.9 ? 33 S2 ? C F3S . ? A F3S 104 ? 1_555 FE4 ? C F3S . ? A F3S 104 ? 1_555 S3 ? C F3S . ? A F3S 104 ? 1_555 106.0 ? 34 SG ? A CYS 51 ? A CYS 51 ? 1_555 FE4 ? C F3S . ? A F3S 104 ? 1_555 S4 ? C F3S . ? A F3S 104 ? 1_555 108.1 ? 35 S2 ? C F3S . ? A F3S 104 ? 1_555 FE4 ? C F3S . ? A F3S 104 ? 1_555 S4 ? C F3S . ? A F3S 104 ? 1_555 109.2 ? 36 S3 ? C F3S . ? A F3S 104 ? 1_555 FE4 ? C F3S . ? A F3S 104 ? 1_555 S4 ? C F3S . ? A F3S 104 ? 1_555 108.0 ? 37 SG ? A CYS 89 ? A CYS 89 ? 1_555 FE4 ? D F3S . ? A F3S 105 ? 1_555 S2 ? D F3S . ? A F3S 105 ? 1_555 110.9 ? 38 SG ? A CYS 89 ? A CYS 89 ? 1_555 FE4 ? D F3S . ? A F3S 105 ? 1_555 S3 ? D F3S . ? A F3S 105 ? 1_555 111.9 ? 39 S2 ? D F3S . ? A F3S 105 ? 1_555 FE4 ? D F3S . ? A F3S 105 ? 1_555 S3 ? D F3S . ? A F3S 105 ? 1_555 108.1 ? 40 SG ? A CYS 89 ? A CYS 89 ? 1_555 FE4 ? D F3S . ? A F3S 105 ? 1_555 S4 ? D F3S . ? A F3S 105 ? 1_555 112.1 ? 41 S2 ? D F3S . ? A F3S 105 ? 1_555 FE4 ? D F3S . ? A F3S 105 ? 1_555 S4 ? D F3S . ? A F3S 105 ? 1_555 105.2 ? 42 S3 ? D F3S . ? A F3S 105 ? 1_555 FE4 ? D F3S . ? A F3S 105 ? 1_555 S4 ? D F3S . ? A F3S 105 ? 1_555 108.3 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1997-09-04 2 'Structure model' 1 1 2008-03-24 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PHASES phasing . ? 1 X-PLOR refinement 3.1 ? 2 R-AXIS 'data reduction' IIC ? 3 # _pdbx_entry_details.entry_id 1XER _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;BECAUSE OF THE ELECTRON DENSITY OF THE SIDE CHAIN OF LYS 29 IS NOT CLEAR, THE EXACT POSITION OF THE SIDE CHAIN OF LYS 29 IS UNDEFINED. ALTHOUGH IT IS KNOWN FROM CHEMICAL ANALYSIS THAT THE N-ZETA ATOM OF LYS 29 IS MONOMETHYLATED, THE COORDINATES CONTAIN ONLY NORMAL SIDE CHAIN COORDINATES FOR LYS 29. ; # _pdbx_unobs_or_zero_occ_atoms.id 1 _pdbx_unobs_or_zero_occ_atoms.PDB_model_num 1 _pdbx_unobs_or_zero_occ_atoms.polymer_flag Y _pdbx_unobs_or_zero_occ_atoms.occupancy_flag 1 _pdbx_unobs_or_zero_occ_atoms.auth_asym_id A _pdbx_unobs_or_zero_occ_atoms.auth_comp_id MLZ _pdbx_unobs_or_zero_occ_atoms.auth_seq_id 29 _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code ? _pdbx_unobs_or_zero_occ_atoms.auth_atom_id CM _pdbx_unobs_or_zero_occ_atoms.label_alt_id ? _pdbx_unobs_or_zero_occ_atoms.label_asym_id A _pdbx_unobs_or_zero_occ_atoms.label_comp_id MLZ _pdbx_unobs_or_zero_occ_atoms.label_seq_id 29 _pdbx_unobs_or_zero_occ_atoms.label_atom_id CM # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ZINC ION' ZN 3 'FE3-S4 CLUSTER' F3S 4 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN 1 106 106 ZN ZN A . C 3 F3S 1 104 104 F3S FS3 A . D 3 F3S 1 105 105 F3S FS3 A . E 4 HOH 1 201 201 HOH HOH A . E 4 HOH 2 202 202 HOH HOH A . E 4 HOH 3 203 203 HOH HOH A . E 4 HOH 4 204 204 HOH HOH A . E 4 HOH 5 205 205 HOH HOH A . E 4 HOH 6 206 206 HOH HOH A . E 4 HOH 7 207 207 HOH HOH A . E 4 HOH 8 208 208 HOH HOH A . E 4 HOH 9 209 209 HOH HOH A . E 4 HOH 10 210 210 HOH HOH A . E 4 HOH 11 211 211 HOH HOH A . E 4 HOH 12 212 212 HOH HOH A . E 4 HOH 13 213 213 HOH HOH A . E 4 HOH 14 214 214 HOH HOH A . E 4 HOH 15 215 215 HOH HOH A . E 4 HOH 16 216 216 HOH HOH A . E 4 HOH 17 217 217 HOH HOH A . E 4 HOH 18 218 218 HOH HOH A . E 4 HOH 19 219 219 HOH HOH A . E 4 HOH 20 220 220 HOH HOH A . E 4 HOH 21 221 221 HOH HOH A . E 4 HOH 22 222 222 HOH HOH A . E 4 HOH 23 223 223 HOH HOH A . E 4 HOH 24 224 224 HOH HOH A . E 4 HOH 25 225 225 HOH HOH A . E 4 HOH 26 226 226 HOH HOH A . E 4 HOH 27 227 227 HOH HOH A . E 4 HOH 28 228 228 HOH HOH A . E 4 HOH 29 229 229 HOH HOH A . E 4 HOH 30 230 230 HOH HOH A . E 4 HOH 31 231 231 HOH HOH A . #