data_1Y6W # _entry.id 1Y6W # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.351 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1Y6W pdb_00001y6w 10.2210/pdb1y6w/pdb RCSB RCSB031191 ? ? WWPDB D_1000031191 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1Y6W _pdbx_database_status.recvd_initial_deposition_date 2004-12-07 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _audit_author.name 'Grabarek, Z.' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Structure of a Trapped Intermediate of Calmodulin: Calcium Regulation of EF-hand Proteins from a New Perspective.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 346 _citation.page_first 1351 _citation.page_last 1366 _citation.year 2005 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15713486 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2005.01.004 # _citation_author.citation_id primary _citation_author.name 'Grabarek, Z.' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 1Y6W _cell.length_a 109.875 _cell.length_b 109.875 _cell.length_c 42.640 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1Y6W _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Calmodulin 17091.398 1 ? 'Q41C, D64N, K75C' ? ? 2 non-polymer syn 'CALCIUM ION' 40.078 4 ? ? ? ? 3 non-polymer syn '(4S)-2-METHYL-2,4-PENTANEDIOL' 118.174 1 ? ? ? ? 4 non-polymer syn 'TERTIARY-BUTYL ALCOHOL' 74.122 1 ? ? ? ? 5 water nat water 18.015 56 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name CaM # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTV(MSE)RSLGCNPTEAELQD(MSE)INEVDADGNGTINFPEFLT (MSE)(MSE)ARC(MSE)KDTDSEEEIREAFRVFDKDGNGYISAAELRHV(MSE)TNLGEKLTDEEVDE(MSE)IREADI DGDGQVNYEEFVQ(MSE)(MSE)TAK ; _entity_poly.pdbx_seq_one_letter_code_can ;ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGCNPTEAELQDMINEVDADGNGTINFPEFLTMMARCMKDTD SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 ASP n 1 3 GLN n 1 4 LEU n 1 5 THR n 1 6 GLU n 1 7 GLU n 1 8 GLN n 1 9 ILE n 1 10 ALA n 1 11 GLU n 1 12 PHE n 1 13 LYS n 1 14 GLU n 1 15 ALA n 1 16 PHE n 1 17 SER n 1 18 LEU n 1 19 PHE n 1 20 ASP n 1 21 LYS n 1 22 ASP n 1 23 GLY n 1 24 ASP n 1 25 GLY n 1 26 THR n 1 27 ILE n 1 28 THR n 1 29 THR n 1 30 LYS n 1 31 GLU n 1 32 LEU n 1 33 GLY n 1 34 THR n 1 35 VAL n 1 36 MSE n 1 37 ARG n 1 38 SER n 1 39 LEU n 1 40 GLY n 1 41 CYS n 1 42 ASN n 1 43 PRO n 1 44 THR n 1 45 GLU n 1 46 ALA n 1 47 GLU n 1 48 LEU n 1 49 GLN n 1 50 ASP n 1 51 MSE n 1 52 ILE n 1 53 ASN n 1 54 GLU n 1 55 VAL n 1 56 ASP n 1 57 ALA n 1 58 ASP n 1 59 GLY n 1 60 ASN n 1 61 GLY n 1 62 THR n 1 63 ILE n 1 64 ASN n 1 65 PHE n 1 66 PRO n 1 67 GLU n 1 68 PHE n 1 69 LEU n 1 70 THR n 1 71 MSE n 1 72 MSE n 1 73 ALA n 1 74 ARG n 1 75 CYS n 1 76 MSE n 1 77 LYS n 1 78 ASP n 1 79 THR n 1 80 ASP n 1 81 SER n 1 82 GLU n 1 83 GLU n 1 84 GLU n 1 85 ILE n 1 86 ARG n 1 87 GLU n 1 88 ALA n 1 89 PHE n 1 90 ARG n 1 91 VAL n 1 92 PHE n 1 93 ASP n 1 94 LYS n 1 95 ASP n 1 96 GLY n 1 97 ASN n 1 98 GLY n 1 99 TYR n 1 100 ILE n 1 101 SER n 1 102 ALA n 1 103 ALA n 1 104 GLU n 1 105 LEU n 1 106 ARG n 1 107 HIS n 1 108 VAL n 1 109 MSE n 1 110 THR n 1 111 ASN n 1 112 LEU n 1 113 GLY n 1 114 GLU n 1 115 LYS n 1 116 LEU n 1 117 THR n 1 118 ASP n 1 119 GLU n 1 120 GLU n 1 121 VAL n 1 122 ASP n 1 123 GLU n 1 124 MSE n 1 125 ILE n 1 126 ARG n 1 127 GLU n 1 128 ALA n 1 129 ASP n 1 130 ILE n 1 131 ASP n 1 132 GLY n 1 133 ASP n 1 134 GLY n 1 135 GLN n 1 136 VAL n 1 137 ASN n 1 138 TYR n 1 139 GLU n 1 140 GLU n 1 141 PHE n 1 142 VAL n 1 143 GLN n 1 144 MSE n 1 145 MSE n 1 146 THR n 1 147 ALA n 1 148 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene 'CALM1, CALM2, CALM3' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pAED4 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CALM_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTD SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_accession P62158 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1Y6W _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 148 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P62158 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 148 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 148 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1Y6W MSE A 36 ? UNP P62158 MET 36 'modified residue' 36 1 1 1Y6W CYS A 41 ? UNP P62158 GLN 41 'engineered mutation' 41 2 1 1Y6W MSE A 51 ? UNP P62158 MET 51 'modified residue' 51 3 1 1Y6W ASN A 64 ? UNP P62158 ASP 64 'engineered mutation' 64 4 1 1Y6W MSE A 71 ? UNP P62158 MET 71 'modified residue' 71 5 1 1Y6W MSE A 72 ? UNP P62158 MET 72 'modified residue' 72 6 1 1Y6W CYS A 75 ? UNP P62158 LYS 75 'engineered mutation' 75 7 1 1Y6W MSE A 76 ? UNP P62158 MET 76 'modified residue' 76 8 1 1Y6W MSE A 109 ? UNP P62158 MET 109 'modified residue' 109 9 1 1Y6W MSE A 124 ? UNP P62158 MET 124 'modified residue' 124 10 1 1Y6W MSE A 144 ? UNP P62158 MET 144 'modified residue' 144 11 1 1Y6W MSE A 145 ? UNP P62158 MET 145 'modified residue' 145 12 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MPD non-polymer . '(4S)-2-METHYL-2,4-PENTANEDIOL' ? 'C6 H14 O2' 118.174 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 TBU non-polymer . 'TERTIARY-BUTYL ALCOHOL' 2-METHYL-2-PROPANOL 'C4 H10 O' 74.122 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1Y6W _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.8 _exptl_crystal.density_percent_sol 67.2 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.2 _exptl_crystal_grow.pdbx_details ;32% (w/v) 2-methyl-2,4-pentanediol, 10% (v/v) t-butanol, 20 mM Na-cacodylate, 5 mM CaCl2, pH 5.2, VAPOR DIFFUSION, HANGING DROP, temperature 277K ; _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2000-06-23 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.97896 1.0 2 0.97919 1.0 3 0.97129 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 14-BM-D' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 14-BM-D _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.97896, 0.97919, 0.97129' # _reflns.entry_id 1Y6W _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30.0 _reflns.d_resolution_high 2.4 _reflns.number_obs 10558 _reflns.number_all ? _reflns.percent_possible_obs 98.6 _reflns.pdbx_Rmerge_I_obs 0.064 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 18.9 _reflns.B_iso_Wilson_estimate 47.9 _reflns.pdbx_redundancy 8.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.4 _reflns_shell.d_res_low 2.49 _reflns_shell.percent_possible_all 98.2 _reflns_shell.Rmerge_I_obs 0.38 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.5 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1Y6W _refine.ls_number_reflns_obs 10322 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF 1351678.82 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.88 _refine.ls_d_res_high 2.40 _refine.ls_percent_reflns_obs 96.7 _refine.ls_R_factor_obs 0.22 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.22 _refine.ls_R_factor_R_free 0.238 _refine.ls_R_factor_R_free_error 0.011 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 492 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 58.2 _refine.aniso_B[1][1] -9.76 _refine.aniso_B[2][2] -9.76 _refine.aniso_B[3][3] 19.51 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.321444 _refine.solvent_model_param_bsol 38.8873 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;The N-terminal domain is locked in a closed conformation with a disulfide bond. This prevents the glutamate in the 12th position of the loop from interacting with the calcium ion in sites I and II. Bond angles in residues 60, 61, 94 and 132 deviate by more than 6*RMSD relative to the standard dictionary (see REMARK 500). These residues are located in the calcium binding loops, thus their conformation is constrained by the calcium ions. ; _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1Y6W _refine_analyze.Luzzati_coordinate_error_obs 0.32 _refine_analyze.Luzzati_sigma_a_obs 0.22 _refine_analyze.Luzzati_d_res_low_obs 20.00 _refine_analyze.Luzzati_coordinate_error_free 0.37 _refine_analyze.Luzzati_sigma_a_free 0.25 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1137 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 4 _refine_hist.number_atoms_solvent 71 _refine_hist.number_atoms_total 1212 _refine_hist.d_res_high 2.40 _refine_hist.d_res_low 19.88 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.009 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.3 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 19.2 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.86 ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.54 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.56 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 2.87 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 4.12 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.40 _refine_ls_shell.d_res_low 2.55 _refine_ls_shell.number_reflns_R_work 1553 _refine_ls_shell.R_factor_R_work 0.263 _refine_ls_shell.percent_reflns_obs 94.6 _refine_ls_shell.R_factor_R_free 0.287 _refine_ls_shell.R_factor_R_free_error 0.032 _refine_ls_shell.percent_reflns_R_free 4.8 _refine_ls_shell.number_reflns_R_free 79 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 WATER_REP.PARAM WATER.TOP 'X-RAY DIFFRACTION' 3 ION.PARAM ION.TOP 'X-RAY DIFFRACTION' 4 HETERO.PARAM HETERO.TOP 'X-RAY DIFFRACTION' # _struct.entry_id 1Y6W _struct.title 'Trapped intermediate of calmodulin' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1Y6W _struct_keywords.pdbx_keywords 'Calcium-Binding Protein' _struct_keywords.text 'EF-hand, calcium-binding protein, engineered disulfide' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 3 ? G N N 4 ? H N N 5 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 5 ? ASP A 20 ? THR A 5 ASP A 20 1 ? 16 HELX_P HELX_P2 2 THR A 29 ? LEU A 39 ? THR A 29 LEU A 39 1 ? 11 HELX_P HELX_P3 3 THR A 44 ? ASP A 56 ? THR A 44 ASP A 56 1 ? 13 HELX_P HELX_P4 4 PHE A 65 ? ASP A 93 ? PHE A 65 ASP A 93 1 ? 29 HELX_P HELX_P5 5 SER A 101 ? GLY A 113 ? SER A 101 GLY A 113 1 ? 13 HELX_P HELX_P6 6 THR A 117 ? ASP A 129 ? THR A 117 ASP A 129 1 ? 13 HELX_P HELX_P7 7 TYR A 138 ? THR A 146 ? TYR A 138 THR A 146 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 41 SG ? ? ? 1_555 A CYS 75 SG ? ? A CYS 41 A CYS 75 1_555 ? ? ? ? ? ? ? 2.048 ? ? covale1 covale both ? A VAL 35 C ? ? ? 1_555 A MSE 36 N ? ? A VAL 35 A MSE 36 1_555 ? ? ? ? ? ? ? 1.317 ? ? covale2 covale both ? A MSE 36 C ? ? ? 1_555 A ARG 37 N ? ? A MSE 36 A ARG 37 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale3 covale both ? A ASP 50 C ? ? ? 1_555 A MSE 51 N ? ? A ASP 50 A MSE 51 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale4 covale both ? A MSE 51 C ? ? ? 1_555 A ILE 52 N ? ? A MSE 51 A ILE 52 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale5 covale both ? A THR 70 C ? ? ? 1_555 A MSE 71 N ? ? A THR 70 A MSE 71 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale6 covale both ? A MSE 71 C ? ? ? 1_555 A MSE 72 N ? ? A MSE 71 A MSE 72 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale7 covale both ? A MSE 72 C ? ? ? 1_555 A ALA 73 N ? ? A MSE 72 A ALA 73 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale8 covale both ? A CYS 75 C ? ? ? 1_555 A MSE 76 N ? ? A CYS 75 A MSE 76 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale9 covale both ? A MSE 76 C ? ? ? 1_555 A LYS 77 N ? ? A MSE 76 A LYS 77 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale10 covale both ? A VAL 108 C ? ? ? 1_555 A MSE 109 N ? ? A VAL 108 A MSE 109 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale11 covale both ? A MSE 109 C ? ? ? 1_555 A THR 110 N ? ? A MSE 109 A THR 110 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale12 covale both ? A GLU 123 C ? ? ? 1_555 A MSE 124 N ? ? A GLU 123 A MSE 124 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale13 covale both ? A MSE 124 C ? ? ? 1_555 A ILE 125 N ? ? A MSE 124 A ILE 125 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale14 covale both ? A GLN 143 C ? ? ? 1_555 A MSE 144 N ? ? A GLN 143 A MSE 144 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale15 covale both ? A MSE 144 C ? ? ? 1_555 A MSE 145 N ? ? A MSE 144 A MSE 145 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale16 covale both ? A MSE 145 C ? ? ? 1_555 A THR 146 N ? ? A MSE 145 A THR 146 1_555 ? ? ? ? ? ? ? 1.327 ? ? metalc1 metalc ? ? A ASP 20 OD1 ? ? ? 1_555 B CA . CA ? ? A ASP 20 A CA 149 1_555 ? ? ? ? ? ? ? 2.346 ? ? metalc2 metalc ? ? A ASP 22 OD1 ? ? ? 1_555 B CA . CA ? ? A ASP 22 A CA 149 1_555 ? ? ? ? ? ? ? 2.428 ? ? metalc3 metalc ? ? A ASP 22 OD2 ? ? ? 1_555 B CA . CA ? ? A ASP 22 A CA 149 1_555 ? ? ? ? ? ? ? 2.978 ? ? metalc4 metalc ? ? A ASP 24 OD2 ? ? ? 1_555 B CA . CA ? ? A ASP 24 A CA 149 1_555 ? ? ? ? ? ? ? 2.427 ? ? metalc5 metalc ? ? A THR 26 O ? ? ? 1_555 B CA . CA ? ? A THR 26 A CA 149 1_555 ? ? ? ? ? ? ? 2.324 ? ? metalc6 metalc ? ? A ASP 56 OD1 ? ? ? 1_555 C CA . CA ? ? A ASP 56 A CA 150 1_555 ? ? ? ? ? ? ? 2.574 ? ? metalc7 metalc ? ? A ASP 56 OD2 ? ? ? 1_555 C CA . CA ? ? A ASP 56 A CA 150 1_555 ? ? ? ? ? ? ? 2.250 ? ? metalc8 metalc ? ? A ASP 58 OD1 ? ? ? 1_555 C CA . CA ? ? A ASP 58 A CA 150 1_555 ? ? ? ? ? ? ? 2.694 ? ? metalc9 metalc ? ? A ASP 58 OD2 ? ? ? 1_555 C CA . CA ? ? A ASP 58 A CA 150 1_555 ? ? ? ? ? ? ? 2.463 ? ? metalc10 metalc ? ? A ASN 60 OD1 ? ? ? 1_555 C CA . CA ? ? A ASN 60 A CA 150 1_555 ? ? ? ? ? ? ? 2.367 ? ? metalc11 metalc ? ? A THR 62 O ? ? ? 1_555 C CA . CA ? ? A THR 62 A CA 150 1_555 ? ? ? ? ? ? ? 2.489 ? ? metalc12 metalc ? ? A ASP 93 OD1 ? ? ? 1_555 D CA . CA ? ? A ASP 93 A CA 151 1_555 ? ? ? ? ? ? ? 2.315 ? ? metalc13 metalc ? ? A ASP 95 OD2 ? ? ? 1_555 D CA . CA ? ? A ASP 95 A CA 151 1_555 ? ? ? ? ? ? ? 2.316 ? ? metalc14 metalc ? ? A ASN 97 OD1 ? ? ? 1_555 D CA . CA ? ? A ASN 97 A CA 151 1_555 ? ? ? ? ? ? ? 2.380 ? ? metalc15 metalc ? ? A TYR 99 O ? ? ? 1_555 D CA . CA ? ? A TYR 99 A CA 151 1_555 ? ? ? ? ? ? ? 2.265 ? ? metalc16 metalc ? ? A GLU 104 OE1 ? ? ? 1_555 D CA . CA ? ? A GLU 104 A CA 151 1_555 ? ? ? ? ? ? ? 2.615 ? ? metalc17 metalc ? ? A GLU 104 OE2 ? ? ? 1_555 D CA . CA ? ? A GLU 104 A CA 151 1_555 ? ? ? ? ? ? ? 2.462 ? ? metalc18 metalc ? ? A ASP 129 OD1 ? ? ? 1_555 E CA . CA ? ? A ASP 129 A CA 152 1_555 ? ? ? ? ? ? ? 2.479 ? ? metalc19 metalc ? ? A ASP 131 OD1 ? ? ? 1_555 E CA . CA ? ? A ASP 131 A CA 152 1_555 ? ? ? ? ? ? ? 2.153 ? ? metalc20 metalc ? ? A ASP 133 OD1 ? ? ? 1_555 E CA . CA ? ? A ASP 133 A CA 152 1_555 ? ? ? ? ? ? ? 2.533 ? ? metalc21 metalc ? ? A GLN 135 O ? ? ? 1_555 E CA . CA ? ? A GLN 135 A CA 152 1_555 ? ? ? ? ? ? ? 2.359 ? ? metalc22 metalc ? ? A GLU 140 OE1 ? ? ? 1_555 E CA . CA ? ? A GLU 140 A CA 152 1_555 ? ? ? ? ? ? ? 2.582 ? ? metalc23 metalc ? ? A GLU 140 OE2 ? ? ? 1_555 E CA . CA ? ? A GLU 140 A CA 152 1_555 ? ? ? ? ? ? ? 2.704 ? ? metalc24 metalc ? ? B CA . CA ? ? ? 1_555 H HOH . O ? ? A CA 149 A HOH 602 1_555 ? ? ? ? ? ? ? 2.556 ? ? metalc25 metalc ? ? B CA . CA ? ? ? 1_555 H HOH . O ? ? A CA 149 A HOH 606 1_555 ? ? ? ? ? ? ? 2.779 ? ? metalc26 metalc ? ? C CA . CA ? ? ? 1_555 F MPD . O2 ? ? A CA 150 A MPD 400 1_555 ? ? ? ? ? ? ? 2.511 ? ? metalc27 metalc ? ? C CA . CA ? ? ? 1_555 F MPD . O4 ? ? A CA 150 A MPD 400 1_555 ? ? ? ? ? ? ? 2.359 ? ? metalc28 metalc ? ? D CA . CA ? ? ? 1_555 H HOH . O ? ? A CA 151 A HOH 611 1_555 ? ? ? ? ? ? ? 2.722 ? ? metalc29 metalc ? ? E CA . CA ? ? ? 1_555 H HOH . O ? ? A CA 152 A HOH 604 1_555 ? ? ? ? ? ? ? 2.463 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? metalc ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 26 ? THR A 28 ? THR A 26 THR A 28 A 2 THR A 62 ? ASN A 64 ? THR A 62 ASN A 64 B 1 TYR A 99 ? ILE A 100 ? TYR A 99 ILE A 100 B 2 VAL A 136 ? ASN A 137 ? VAL A 136 ASN A 137 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 27 ? N ILE A 27 O ILE A 63 ? O ILE A 63 B 1 2 N ILE A 100 ? N ILE A 100 O VAL A 136 ? O VAL A 136 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CA 149 ? 6 'BINDING SITE FOR RESIDUE CA A 149' AC2 Software A CA 150 ? 5 'BINDING SITE FOR RESIDUE CA A 150' AC3 Software A CA 151 ? 6 'BINDING SITE FOR RESIDUE CA A 151' AC4 Software A CA 152 ? 6 'BINDING SITE FOR RESIDUE CA A 152' AC5 Software A MPD 400 ? 10 'BINDING SITE FOR RESIDUE MPD A 400' AC6 Software A TBU 500 ? 2 'BINDING SITE FOR RESIDUE TBU A 500' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 ASP A 20 ? ASP A 20 . ? 1_555 ? 2 AC1 6 ASP A 22 ? ASP A 22 . ? 1_555 ? 3 AC1 6 ASP A 24 ? ASP A 24 . ? 1_555 ? 4 AC1 6 THR A 26 ? THR A 26 . ? 1_555 ? 5 AC1 6 HOH H . ? HOH A 602 . ? 1_555 ? 6 AC1 6 HOH H . ? HOH A 606 . ? 1_555 ? 7 AC2 5 ASP A 56 ? ASP A 56 . ? 1_555 ? 8 AC2 5 ASP A 58 ? ASP A 58 . ? 1_555 ? 9 AC2 5 ASN A 60 ? ASN A 60 . ? 1_555 ? 10 AC2 5 THR A 62 ? THR A 62 . ? 1_555 ? 11 AC2 5 MPD F . ? MPD A 400 . ? 1_555 ? 12 AC3 6 ASP A 93 ? ASP A 93 . ? 1_555 ? 13 AC3 6 ASP A 95 ? ASP A 95 . ? 1_555 ? 14 AC3 6 ASN A 97 ? ASN A 97 . ? 1_555 ? 15 AC3 6 TYR A 99 ? TYR A 99 . ? 1_555 ? 16 AC3 6 GLU A 104 ? GLU A 104 . ? 1_555 ? 17 AC3 6 HOH H . ? HOH A 611 . ? 1_555 ? 18 AC4 6 ASP A 129 ? ASP A 129 . ? 1_555 ? 19 AC4 6 ASP A 131 ? ASP A 131 . ? 1_555 ? 20 AC4 6 ASP A 133 ? ASP A 133 . ? 1_555 ? 21 AC4 6 GLN A 135 ? GLN A 135 . ? 1_555 ? 22 AC4 6 GLU A 140 ? GLU A 140 . ? 1_555 ? 23 AC4 6 HOH H . ? HOH A 604 . ? 1_555 ? 24 AC5 10 THR A 26 ? THR A 26 . ? 1_555 ? 25 AC5 10 ARG A 37 ? ARG A 37 . ? 4_455 ? 26 AC5 10 SER A 38 ? SER A 38 . ? 4_455 ? 27 AC5 10 ASP A 56 ? ASP A 56 . ? 1_555 ? 28 AC5 10 ASP A 58 ? ASP A 58 . ? 1_555 ? 29 AC5 10 ASN A 60 ? ASN A 60 . ? 1_555 ? 30 AC5 10 THR A 62 ? THR A 62 . ? 1_555 ? 31 AC5 10 ASN A 64 ? ASN A 64 . ? 1_555 ? 32 AC5 10 GLU A 67 ? GLU A 67 . ? 1_555 ? 33 AC5 10 CA C . ? CA A 150 . ? 1_555 ? 34 AC6 2 LEU A 105 ? LEU A 105 . ? 1_555 ? 35 AC6 2 MSE A 144 ? MSE A 144 . ? 1_555 ? # _database_PDB_matrix.entry_id 1Y6W _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1Y6W _atom_sites.fract_transf_matrix[1][1] 0.009101 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009101 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.023452 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 ? ? ? A . n A 1 2 ASP 2 2 ? ? ? A . n A 1 3 GLN 3 3 3 GLN GLN A . n A 1 4 LEU 4 4 4 LEU LEU A . n A 1 5 THR 5 5 5 THR THR A . n A 1 6 GLU 6 6 6 GLU GLU A . n A 1 7 GLU 7 7 7 GLU GLU A . n A 1 8 GLN 8 8 8 GLN GLN A . n A 1 9 ILE 9 9 9 ILE ILE A . n A 1 10 ALA 10 10 10 ALA ALA A . n A 1 11 GLU 11 11 11 GLU GLU A . n A 1 12 PHE 12 12 12 PHE PHE A . n A 1 13 LYS 13 13 13 LYS LYS A . n A 1 14 GLU 14 14 14 GLU GLU A . n A 1 15 ALA 15 15 15 ALA ALA A . n A 1 16 PHE 16 16 16 PHE PHE A . n A 1 17 SER 17 17 17 SER SER A . n A 1 18 LEU 18 18 18 LEU LEU A . n A 1 19 PHE 19 19 19 PHE PHE A . n A 1 20 ASP 20 20 20 ASP ASP A . n A 1 21 LYS 21 21 21 LYS LYS A . n A 1 22 ASP 22 22 22 ASP ASP A . n A 1 23 GLY 23 23 23 GLY GLY A . n A 1 24 ASP 24 24 24 ASP ASP A . n A 1 25 GLY 25 25 25 GLY GLY A . n A 1 26 THR 26 26 26 THR THR A . n A 1 27 ILE 27 27 27 ILE ILE A . n A 1 28 THR 28 28 28 THR THR A . n A 1 29 THR 29 29 29 THR THR A . n A 1 30 LYS 30 30 30 LYS LYS A . n A 1 31 GLU 31 31 31 GLU GLU A . n A 1 32 LEU 32 32 32 LEU LEU A . n A 1 33 GLY 33 33 33 GLY GLY A . n A 1 34 THR 34 34 34 THR THR A . n A 1 35 VAL 35 35 35 VAL VAL A . n A 1 36 MSE 36 36 36 MSE MSE A . n A 1 37 ARG 37 37 37 ARG ARG A . n A 1 38 SER 38 38 38 SER SER A . n A 1 39 LEU 39 39 39 LEU LEU A . n A 1 40 GLY 40 40 40 GLY GLY A . n A 1 41 CYS 41 41 41 CYS CYS A . n A 1 42 ASN 42 42 42 ASN ASN A . n A 1 43 PRO 43 43 43 PRO PRO A . n A 1 44 THR 44 44 44 THR THR A . n A 1 45 GLU 45 45 45 GLU GLU A . n A 1 46 ALA 46 46 46 ALA ALA A . n A 1 47 GLU 47 47 47 GLU GLU A . n A 1 48 LEU 48 48 48 LEU LEU A . n A 1 49 GLN 49 49 49 GLN GLN A . n A 1 50 ASP 50 50 50 ASP ASP A . n A 1 51 MSE 51 51 51 MSE MSE A . n A 1 52 ILE 52 52 52 ILE ILE A . n A 1 53 ASN 53 53 53 ASN ASN A . n A 1 54 GLU 54 54 54 GLU GLU A . n A 1 55 VAL 55 55 55 VAL VAL A . n A 1 56 ASP 56 56 56 ASP ASP A . n A 1 57 ALA 57 57 57 ALA ALA A . n A 1 58 ASP 58 58 58 ASP ASP A . n A 1 59 GLY 59 59 59 GLY GLY A . n A 1 60 ASN 60 60 60 ASN ASN A . n A 1 61 GLY 61 61 61 GLY GLY A . n A 1 62 THR 62 62 62 THR THR A . n A 1 63 ILE 63 63 63 ILE ILE A . n A 1 64 ASN 64 64 64 ASN ASN A . n A 1 65 PHE 65 65 65 PHE PHE A . n A 1 66 PRO 66 66 66 PRO PRO A . n A 1 67 GLU 67 67 67 GLU GLU A . n A 1 68 PHE 68 68 68 PHE PHE A . n A 1 69 LEU 69 69 69 LEU LEU A . n A 1 70 THR 70 70 70 THR THR A . n A 1 71 MSE 71 71 71 MSE MSE A . n A 1 72 MSE 72 72 72 MSE MSE A . n A 1 73 ALA 73 73 73 ALA ALA A . n A 1 74 ARG 74 74 74 ARG ARG A . n A 1 75 CYS 75 75 75 CYS CYS A . n A 1 76 MSE 76 76 76 MSE MSE A . n A 1 77 LYS 77 77 77 LYS LYS A . n A 1 78 ASP 78 78 78 ASP ASP A . n A 1 79 THR 79 79 79 THR THR A . n A 1 80 ASP 80 80 80 ASP ASP A . n A 1 81 SER 81 81 81 SER SER A . n A 1 82 GLU 82 82 82 GLU GLU A . n A 1 83 GLU 83 83 83 GLU GLU A . n A 1 84 GLU 84 84 84 GLU GLU A . n A 1 85 ILE 85 85 85 ILE ILE A . n A 1 86 ARG 86 86 86 ARG ARG A . n A 1 87 GLU 87 87 87 GLU GLU A . n A 1 88 ALA 88 88 88 ALA ALA A . n A 1 89 PHE 89 89 89 PHE PHE A . n A 1 90 ARG 90 90 90 ARG ARG A . n A 1 91 VAL 91 91 91 VAL VAL A . n A 1 92 PHE 92 92 92 PHE PHE A . n A 1 93 ASP 93 93 93 ASP ASP A . n A 1 94 LYS 94 94 94 LYS LYS A . n A 1 95 ASP 95 95 95 ASP ASP A . n A 1 96 GLY 96 96 96 GLY GLY A . n A 1 97 ASN 97 97 97 ASN ASN A . n A 1 98 GLY 98 98 98 GLY GLY A . n A 1 99 TYR 99 99 99 TYR TYR A . n A 1 100 ILE 100 100 100 ILE ILE A . n A 1 101 SER 101 101 101 SER SER A . n A 1 102 ALA 102 102 102 ALA ALA A . n A 1 103 ALA 103 103 103 ALA ALA A . n A 1 104 GLU 104 104 104 GLU GLU A . n A 1 105 LEU 105 105 105 LEU LEU A . n A 1 106 ARG 106 106 106 ARG ARG A . n A 1 107 HIS 107 107 107 HIS HIS A . n A 1 108 VAL 108 108 108 VAL VAL A . n A 1 109 MSE 109 109 109 MSE MSE A . n A 1 110 THR 110 110 110 THR THR A . n A 1 111 ASN 111 111 111 ASN ASN A . n A 1 112 LEU 112 112 112 LEU LEU A . n A 1 113 GLY 113 113 113 GLY GLY A . n A 1 114 GLU 114 114 114 GLU GLU A . n A 1 115 LYS 115 115 115 LYS LYS A . n A 1 116 LEU 116 116 116 LEU LEU A . n A 1 117 THR 117 117 117 THR THR A . n A 1 118 ASP 118 118 118 ASP ASP A . n A 1 119 GLU 119 119 119 GLU GLU A . n A 1 120 GLU 120 120 120 GLU GLU A . n A 1 121 VAL 121 121 121 VAL VAL A . n A 1 122 ASP 122 122 122 ASP ASP A . n A 1 123 GLU 123 123 123 GLU GLU A . n A 1 124 MSE 124 124 124 MSE MSE A . n A 1 125 ILE 125 125 125 ILE ILE A . n A 1 126 ARG 126 126 126 ARG ARG A . n A 1 127 GLU 127 127 127 GLU GLU A . n A 1 128 ALA 128 128 128 ALA ALA A . n A 1 129 ASP 129 129 129 ASP ASP A . n A 1 130 ILE 130 130 130 ILE ILE A . n A 1 131 ASP 131 131 131 ASP ASP A . n A 1 132 GLY 132 132 132 GLY GLY A . n A 1 133 ASP 133 133 133 ASP ASP A . n A 1 134 GLY 134 134 134 GLY GLY A . n A 1 135 GLN 135 135 135 GLN GLN A . n A 1 136 VAL 136 136 136 VAL VAL A . n A 1 137 ASN 137 137 137 ASN ASN A . n A 1 138 TYR 138 138 138 TYR TYR A . n A 1 139 GLU 139 139 139 GLU GLU A . n A 1 140 GLU 140 140 140 GLU GLU A . n A 1 141 PHE 141 141 141 PHE PHE A . n A 1 142 VAL 142 142 142 VAL VAL A . n A 1 143 GLN 143 143 143 GLN GLN A . n A 1 144 MSE 144 144 144 MSE MSE A . n A 1 145 MSE 145 145 145 MSE MSE A . n A 1 146 THR 146 146 146 THR THR A . n A 1 147 ALA 147 147 147 ALA ALA A . n A 1 148 LYS 148 148 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA 1 149 148 CA CA A . C 2 CA 1 150 149 CA CA A . D 2 CA 1 151 150 CA CA A . E 2 CA 1 152 151 CA CA A . F 3 MPD 1 400 400 MPD MPD A . G 4 TBU 1 500 500 TBU TBU A . H 5 HOH 1 601 601 HOH HOH A . H 5 HOH 2 602 602 HOH HOH A . H 5 HOH 3 603 603 HOH HOH A . H 5 HOH 4 604 604 HOH HOH A . H 5 HOH 5 605 605 HOH HOH A . H 5 HOH 6 606 606 HOH HOH A . H 5 HOH 7 607 607 HOH HOH A . H 5 HOH 8 608 608 HOH HOH A . H 5 HOH 9 609 609 HOH HOH A . H 5 HOH 10 610 610 HOH HOH A . H 5 HOH 11 611 611 HOH HOH A . H 5 HOH 12 612 612 HOH HOH A . H 5 HOH 13 613 613 HOH HOH A . H 5 HOH 14 615 615 HOH HOH A . H 5 HOH 15 616 616 HOH HOH A . H 5 HOH 16 617 617 HOH HOH A . H 5 HOH 17 618 618 HOH HOH A . H 5 HOH 18 619 619 HOH HOH A . H 5 HOH 19 620 620 HOH HOH A . H 5 HOH 20 621 621 HOH HOH A . H 5 HOH 21 622 622 HOH HOH A . H 5 HOH 22 623 623 HOH HOH A . H 5 HOH 23 624 624 HOH HOH A . H 5 HOH 24 626 626 HOH HOH A . H 5 HOH 25 627 627 HOH HOH A . H 5 HOH 26 628 628 HOH HOH A . H 5 HOH 27 629 629 HOH HOH A . H 5 HOH 28 630 630 HOH HOH A . H 5 HOH 29 631 631 HOH HOH A . H 5 HOH 30 632 632 HOH HOH A . H 5 HOH 31 633 633 HOH HOH A . H 5 HOH 32 636 636 HOH HOH A . H 5 HOH 33 639 639 HOH HOH A . H 5 HOH 34 640 640 HOH HOH A . H 5 HOH 35 641 641 HOH HOH A . H 5 HOH 36 644 644 HOH HOH A . H 5 HOH 37 645 645 HOH HOH A . H 5 HOH 38 646 646 HOH HOH A . H 5 HOH 39 647 647 HOH HOH A . H 5 HOH 40 648 648 HOH HOH A . H 5 HOH 41 649 649 HOH HOH A . H 5 HOH 42 650 650 HOH HOH A . H 5 HOH 43 651 651 HOH HOH A . H 5 HOH 44 653 653 HOH HOH A . H 5 HOH 45 654 654 HOH HOH A . H 5 HOH 46 655 655 HOH HOH A . H 5 HOH 47 656 656 HOH HOH A . H 5 HOH 48 660 660 HOH HOH A . H 5 HOH 49 661 661 HOH HOH A . H 5 HOH 50 662 662 HOH HOH A . H 5 HOH 51 663 663 HOH HOH A . H 5 HOH 52 664 664 HOH HOH A . H 5 HOH 53 666 666 HOH HOH A . H 5 HOH 54 668 668 HOH HOH A . H 5 HOH 55 669 669 HOH HOH A . H 5 HOH 56 672 672 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 36 A MSE 36 ? MET SELENOMETHIONINE 2 A MSE 51 A MSE 51 ? MET SELENOMETHIONINE 3 A MSE 71 A MSE 71 ? MET SELENOMETHIONINE 4 A MSE 72 A MSE 72 ? MET SELENOMETHIONINE 5 A MSE 76 A MSE 76 ? MET SELENOMETHIONINE 6 A MSE 109 A MSE 109 ? MET SELENOMETHIONINE 7 A MSE 124 A MSE 124 ? MET SELENOMETHIONINE 8 A MSE 144 A MSE 144 ? MET SELENOMETHIONINE 9 A MSE 145 A MSE 145 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD1 ? A ASP 20 ? A ASP 20 ? 1_555 CA ? B CA . ? A CA 149 ? 1_555 OD1 ? A ASP 22 ? A ASP 22 ? 1_555 82.1 ? 2 OD1 ? A ASP 20 ? A ASP 20 ? 1_555 CA ? B CA . ? A CA 149 ? 1_555 OD2 ? A ASP 22 ? A ASP 22 ? 1_555 105.0 ? 3 OD1 ? A ASP 22 ? A ASP 22 ? 1_555 CA ? B CA . ? A CA 149 ? 1_555 OD2 ? A ASP 22 ? A ASP 22 ? 1_555 46.1 ? 4 OD1 ? A ASP 20 ? A ASP 20 ? 1_555 CA ? B CA . ? A CA 149 ? 1_555 OD2 ? A ASP 24 ? A ASP 24 ? 1_555 82.4 ? 5 OD1 ? A ASP 22 ? A ASP 22 ? 1_555 CA ? B CA . ? A CA 149 ? 1_555 OD2 ? A ASP 24 ? A ASP 24 ? 1_555 110.5 ? 6 OD2 ? A ASP 22 ? A ASP 22 ? 1_555 CA ? B CA . ? A CA 149 ? 1_555 OD2 ? A ASP 24 ? A ASP 24 ? 1_555 74.5 ? 7 OD1 ? A ASP 20 ? A ASP 20 ? 1_555 CA ? B CA . ? A CA 149 ? 1_555 O ? A THR 26 ? A THR 26 ? 1_555 83.1 ? 8 OD1 ? A ASP 22 ? A ASP 22 ? 1_555 CA ? B CA . ? A CA 149 ? 1_555 O ? A THR 26 ? A THR 26 ? 1_555 159.0 ? 9 OD2 ? A ASP 22 ? A ASP 22 ? 1_555 CA ? B CA . ? A CA 149 ? 1_555 O ? A THR 26 ? A THR 26 ? 1_555 153.8 ? 10 OD2 ? A ASP 24 ? A ASP 24 ? 1_555 CA ? B CA . ? A CA 149 ? 1_555 O ? A THR 26 ? A THR 26 ? 1_555 82.1 ? 11 OD1 ? A ASP 20 ? A ASP 20 ? 1_555 CA ? B CA . ? A CA 149 ? 1_555 O ? H HOH . ? A HOH 602 ? 1_555 107.1 ? 12 OD1 ? A ASP 22 ? A ASP 22 ? 1_555 CA ? B CA . ? A CA 149 ? 1_555 O ? H HOH . ? A HOH 602 ? 1_555 84.6 ? 13 OD2 ? A ASP 22 ? A ASP 22 ? 1_555 CA ? B CA . ? A CA 149 ? 1_555 O ? H HOH . ? A HOH 602 ? 1_555 114.6 ? 14 OD2 ? A ASP 24 ? A ASP 24 ? 1_555 CA ? B CA . ? A CA 149 ? 1_555 O ? H HOH . ? A HOH 602 ? 1_555 163.5 ? 15 O ? A THR 26 ? A THR 26 ? 1_555 CA ? B CA . ? A CA 149 ? 1_555 O ? H HOH . ? A HOH 602 ? 1_555 85.6 ? 16 OD1 ? A ASP 20 ? A ASP 20 ? 1_555 CA ? B CA . ? A CA 149 ? 1_555 O ? H HOH . ? A HOH 606 ? 1_555 157.2 ? 17 OD1 ? A ASP 22 ? A ASP 22 ? 1_555 CA ? B CA . ? A CA 149 ? 1_555 O ? H HOH . ? A HOH 606 ? 1_555 91.3 ? 18 OD2 ? A ASP 22 ? A ASP 22 ? 1_555 CA ? B CA . ? A CA 149 ? 1_555 O ? H HOH . ? A HOH 606 ? 1_555 56.7 ? 19 OD2 ? A ASP 24 ? A ASP 24 ? 1_555 CA ? B CA . ? A CA 149 ? 1_555 O ? H HOH . ? A HOH 606 ? 1_555 79.6 ? 20 O ? A THR 26 ? A THR 26 ? 1_555 CA ? B CA . ? A CA 149 ? 1_555 O ? H HOH . ? A HOH 606 ? 1_555 107.8 ? 21 O ? H HOH . ? A HOH 602 ? 1_555 CA ? B CA . ? A CA 149 ? 1_555 O ? H HOH . ? A HOH 606 ? 1_555 93.9 ? 22 OD1 ? A ASP 56 ? A ASP 56 ? 1_555 CA ? C CA . ? A CA 150 ? 1_555 OD2 ? A ASP 56 ? A ASP 56 ? 1_555 53.7 ? 23 OD1 ? A ASP 56 ? A ASP 56 ? 1_555 CA ? C CA . ? A CA 150 ? 1_555 OD1 ? A ASP 58 ? A ASP 58 ? 1_555 121.0 ? 24 OD2 ? A ASP 56 ? A ASP 56 ? 1_555 CA ? C CA . ? A CA 150 ? 1_555 OD1 ? A ASP 58 ? A ASP 58 ? 1_555 106.4 ? 25 OD1 ? A ASP 56 ? A ASP 56 ? 1_555 CA ? C CA . ? A CA 150 ? 1_555 OD2 ? A ASP 58 ? A ASP 58 ? 1_555 71.7 ? 26 OD2 ? A ASP 56 ? A ASP 56 ? 1_555 CA ? C CA . ? A CA 150 ? 1_555 OD2 ? A ASP 58 ? A ASP 58 ? 1_555 75.8 ? 27 OD1 ? A ASP 58 ? A ASP 58 ? 1_555 CA ? C CA . ? A CA 150 ? 1_555 OD2 ? A ASP 58 ? A ASP 58 ? 1_555 49.4 ? 28 OD1 ? A ASP 56 ? A ASP 56 ? 1_555 CA ? C CA . ? A CA 150 ? 1_555 OD1 ? A ASN 60 ? A ASN 60 ? 1_555 90.6 ? 29 OD2 ? A ASP 56 ? A ASP 56 ? 1_555 CA ? C CA . ? A CA 150 ? 1_555 OD1 ? A ASN 60 ? A ASN 60 ? 1_555 140.3 ? 30 OD1 ? A ASP 58 ? A ASP 58 ? 1_555 CA ? C CA . ? A CA 150 ? 1_555 OD1 ? A ASN 60 ? A ASN 60 ? 1_555 75.4 ? 31 OD2 ? A ASP 58 ? A ASP 58 ? 1_555 CA ? C CA . ? A CA 150 ? 1_555 OD1 ? A ASN 60 ? A ASN 60 ? 1_555 76.8 ? 32 OD1 ? A ASP 56 ? A ASP 56 ? 1_555 CA ? C CA . ? A CA 150 ? 1_555 O ? A THR 62 ? A THR 62 ? 1_555 71.8 ? 33 OD2 ? A ASP 56 ? A ASP 56 ? 1_555 CA ? C CA . ? A CA 150 ? 1_555 O ? A THR 62 ? A THR 62 ? 1_555 92.6 ? 34 OD1 ? A ASP 58 ? A ASP 58 ? 1_555 CA ? C CA . ? A CA 150 ? 1_555 O ? A THR 62 ? A THR 62 ? 1_555 160.9 ? 35 OD2 ? A ASP 58 ? A ASP 58 ? 1_555 CA ? C CA . ? A CA 150 ? 1_555 O ? A THR 62 ? A THR 62 ? 1_555 141.2 ? 36 OD1 ? A ASN 60 ? A ASN 60 ? 1_555 CA ? C CA . ? A CA 150 ? 1_555 O ? A THR 62 ? A THR 62 ? 1_555 91.2 ? 37 OD1 ? A ASP 56 ? A ASP 56 ? 1_555 CA ? C CA . ? A CA 150 ? 1_555 O2 ? F MPD . ? A MPD 400 ? 1_555 148.8 ? 38 OD2 ? A ASP 56 ? A ASP 56 ? 1_555 CA ? C CA . ? A CA 150 ? 1_555 O2 ? F MPD . ? A MPD 400 ? 1_555 142.1 ? 39 OD1 ? A ASP 58 ? A ASP 58 ? 1_555 CA ? C CA . ? A CA 150 ? 1_555 O2 ? F MPD . ? A MPD 400 ? 1_555 84.0 ? 40 OD2 ? A ASP 58 ? A ASP 58 ? 1_555 CA ? C CA . ? A CA 150 ? 1_555 O2 ? F MPD . ? A MPD 400 ? 1_555 130.9 ? 41 OD1 ? A ASN 60 ? A ASN 60 ? 1_555 CA ? C CA . ? A CA 150 ? 1_555 O2 ? F MPD . ? A MPD 400 ? 1_555 77.3 ? 42 O ? A THR 62 ? A THR 62 ? 1_555 CA ? C CA . ? A CA 150 ? 1_555 O2 ? F MPD . ? A MPD 400 ? 1_555 79.8 ? 43 OD1 ? A ASP 56 ? A ASP 56 ? 1_555 CA ? C CA . ? A CA 150 ? 1_555 O4 ? F MPD . ? A MPD 400 ? 1_555 125.8 ? 44 OD2 ? A ASP 56 ? A ASP 56 ? 1_555 CA ? C CA . ? A CA 150 ? 1_555 O4 ? F MPD . ? A MPD 400 ? 1_555 73.7 ? 45 OD1 ? A ASP 58 ? A ASP 58 ? 1_555 CA ? C CA . ? A CA 150 ? 1_555 O4 ? F MPD . ? A MPD 400 ? 1_555 82.9 ? 46 OD2 ? A ASP 58 ? A ASP 58 ? 1_555 CA ? C CA . ? A CA 150 ? 1_555 O4 ? F MPD . ? A MPD 400 ? 1_555 110.3 ? 47 OD1 ? A ASN 60 ? A ASN 60 ? 1_555 CA ? C CA . ? A CA 150 ? 1_555 O4 ? F MPD . ? A MPD 400 ? 1_555 143.6 ? 48 O ? A THR 62 ? A THR 62 ? 1_555 CA ? C CA . ? A CA 150 ? 1_555 O4 ? F MPD . ? A MPD 400 ? 1_555 101.2 ? 49 O2 ? F MPD . ? A MPD 400 ? 1_555 CA ? C CA . ? A CA 150 ? 1_555 O4 ? F MPD . ? A MPD 400 ? 1_555 71.5 ? 50 OD1 ? A ASP 93 ? A ASP 93 ? 1_555 CA ? D CA . ? A CA 151 ? 1_555 OD2 ? A ASP 95 ? A ASP 95 ? 1_555 84.4 ? 51 OD1 ? A ASP 93 ? A ASP 93 ? 1_555 CA ? D CA . ? A CA 151 ? 1_555 OD1 ? A ASN 97 ? A ASN 97 ? 1_555 83.7 ? 52 OD2 ? A ASP 95 ? A ASP 95 ? 1_555 CA ? D CA . ? A CA 151 ? 1_555 OD1 ? A ASN 97 ? A ASN 97 ? 1_555 72.2 ? 53 OD1 ? A ASP 93 ? A ASP 93 ? 1_555 CA ? D CA . ? A CA 151 ? 1_555 O ? A TYR 99 ? A TYR 99 ? 1_555 81.6 ? 54 OD2 ? A ASP 95 ? A ASP 95 ? 1_555 CA ? D CA . ? A CA 151 ? 1_555 O ? A TYR 99 ? A TYR 99 ? 1_555 153.4 ? 55 OD1 ? A ASN 97 ? A ASN 97 ? 1_555 CA ? D CA . ? A CA 151 ? 1_555 O ? A TYR 99 ? A TYR 99 ? 1_555 83.8 ? 56 OD1 ? A ASP 93 ? A ASP 93 ? 1_555 CA ? D CA . ? A CA 151 ? 1_555 OE1 ? A GLU 104 ? A GLU 104 ? 1_555 105.5 ? 57 OD2 ? A ASP 95 ? A ASP 95 ? 1_555 CA ? D CA . ? A CA 151 ? 1_555 OE1 ? A GLU 104 ? A GLU 104 ? 1_555 131.4 ? 58 OD1 ? A ASN 97 ? A ASN 97 ? 1_555 CA ? D CA . ? A CA 151 ? 1_555 OE1 ? A GLU 104 ? A GLU 104 ? 1_555 154.6 ? 59 O ? A TYR 99 ? A TYR 99 ? 1_555 CA ? D CA . ? A CA 151 ? 1_555 OE1 ? A GLU 104 ? A GLU 104 ? 1_555 74.5 ? 60 OD1 ? A ASP 93 ? A ASP 93 ? 1_555 CA ? D CA . ? A CA 151 ? 1_555 OE2 ? A GLU 104 ? A GLU 104 ? 1_555 100.0 ? 61 OD2 ? A ASP 95 ? A ASP 95 ? 1_555 CA ? D CA . ? A CA 151 ? 1_555 OE2 ? A GLU 104 ? A GLU 104 ? 1_555 80.6 ? 62 OD1 ? A ASN 97 ? A ASN 97 ? 1_555 CA ? D CA . ? A CA 151 ? 1_555 OE2 ? A GLU 104 ? A GLU 104 ? 1_555 152.2 ? 63 O ? A TYR 99 ? A TYR 99 ? 1_555 CA ? D CA . ? A CA 151 ? 1_555 OE2 ? A GLU 104 ? A GLU 104 ? 1_555 124.0 ? 64 OE1 ? A GLU 104 ? A GLU 104 ? 1_555 CA ? D CA . ? A CA 151 ? 1_555 OE2 ? A GLU 104 ? A GLU 104 ? 1_555 50.9 ? 65 OD1 ? A ASP 93 ? A ASP 93 ? 1_555 CA ? D CA . ? A CA 151 ? 1_555 O ? H HOH . ? A HOH 611 ? 1_555 166.7 ? 66 OD2 ? A ASP 95 ? A ASP 95 ? 1_555 CA ? D CA . ? A CA 151 ? 1_555 O ? H HOH . ? A HOH 611 ? 1_555 88.3 ? 67 OD1 ? A ASN 97 ? A ASN 97 ? 1_555 CA ? D CA . ? A CA 151 ? 1_555 O ? H HOH . ? A HOH 611 ? 1_555 83.5 ? 68 O ? A TYR 99 ? A TYR 99 ? 1_555 CA ? D CA . ? A CA 151 ? 1_555 O ? H HOH . ? A HOH 611 ? 1_555 100.6 ? 69 OE1 ? A GLU 104 ? A GLU 104 ? 1_555 CA ? D CA . ? A CA 151 ? 1_555 O ? H HOH . ? A HOH 611 ? 1_555 87.7 ? 70 OE2 ? A GLU 104 ? A GLU 104 ? 1_555 CA ? D CA . ? A CA 151 ? 1_555 O ? H HOH . ? A HOH 611 ? 1_555 89.8 ? 71 OD1 ? A ASP 129 ? A ASP 129 ? 1_555 CA ? E CA . ? A CA 152 ? 1_555 OD1 ? A ASP 131 ? A ASP 131 ? 1_555 83.9 ? 72 OD1 ? A ASP 129 ? A ASP 129 ? 1_555 CA ? E CA . ? A CA 152 ? 1_555 OD1 ? A ASP 133 ? A ASP 133 ? 1_555 81.4 ? 73 OD1 ? A ASP 131 ? A ASP 131 ? 1_555 CA ? E CA . ? A CA 152 ? 1_555 OD1 ? A ASP 133 ? A ASP 133 ? 1_555 97.0 ? 74 OD1 ? A ASP 129 ? A ASP 129 ? 1_555 CA ? E CA . ? A CA 152 ? 1_555 O ? A GLN 135 ? A GLN 135 ? 1_555 79.0 ? 75 OD1 ? A ASP 131 ? A ASP 131 ? 1_555 CA ? E CA . ? A CA 152 ? 1_555 O ? A GLN 135 ? A GLN 135 ? 1_555 162.2 ? 76 OD1 ? A ASP 133 ? A ASP 133 ? 1_555 CA ? E CA . ? A CA 152 ? 1_555 O ? A GLN 135 ? A GLN 135 ? 1_555 75.8 ? 77 OD1 ? A ASP 129 ? A ASP 129 ? 1_555 CA ? E CA . ? A CA 152 ? 1_555 OE1 ? A GLU 140 ? A GLU 140 ? 1_555 111.5 ? 78 OD1 ? A ASP 131 ? A ASP 131 ? 1_555 CA ? E CA . ? A CA 152 ? 1_555 OE1 ? A GLU 140 ? A GLU 140 ? 1_555 115.4 ? 79 OD1 ? A ASP 133 ? A ASP 133 ? 1_555 CA ? E CA . ? A CA 152 ? 1_555 OE1 ? A GLU 140 ? A GLU 140 ? 1_555 145.7 ? 80 O ? A GLN 135 ? A GLN 135 ? 1_555 CA ? E CA . ? A CA 152 ? 1_555 OE1 ? A GLU 140 ? A GLU 140 ? 1_555 75.9 ? 81 OD1 ? A ASP 129 ? A ASP 129 ? 1_555 CA ? E CA . ? A CA 152 ? 1_555 OE2 ? A GLU 140 ? A GLU 140 ? 1_555 84.1 ? 82 OD1 ? A ASP 131 ? A ASP 131 ? 1_555 CA ? E CA . ? A CA 152 ? 1_555 OE2 ? A GLU 140 ? A GLU 140 ? 1_555 73.0 ? 83 OD1 ? A ASP 133 ? A ASP 133 ? 1_555 CA ? E CA . ? A CA 152 ? 1_555 OE2 ? A GLU 140 ? A GLU 140 ? 1_555 163.2 ? 84 O ? A GLN 135 ? A GLN 135 ? 1_555 CA ? E CA . ? A CA 152 ? 1_555 OE2 ? A GLU 140 ? A GLU 140 ? 1_555 109.6 ? 85 OE1 ? A GLU 140 ? A GLU 140 ? 1_555 CA ? E CA . ? A CA 152 ? 1_555 OE2 ? A GLU 140 ? A GLU 140 ? 1_555 49.0 ? 86 OD1 ? A ASP 129 ? A ASP 129 ? 1_555 CA ? E CA . ? A CA 152 ? 1_555 O ? H HOH . ? A HOH 604 ? 1_555 159.6 ? 87 OD1 ? A ASP 131 ? A ASP 131 ? 1_555 CA ? E CA . ? A CA 152 ? 1_555 O ? H HOH . ? A HOH 604 ? 1_555 96.5 ? 88 OD1 ? A ASP 133 ? A ASP 133 ? 1_555 CA ? E CA . ? A CA 152 ? 1_555 O ? H HOH . ? A HOH 604 ? 1_555 78.3 ? 89 O ? A GLN 135 ? A GLN 135 ? 1_555 CA ? E CA . ? A CA 152 ? 1_555 O ? H HOH . ? A HOH 604 ? 1_555 97.9 ? 90 OE1 ? A GLU 140 ? A GLU 140 ? 1_555 CA ? E CA . ? A CA 152 ? 1_555 O ? H HOH . ? A HOH 604 ? 1_555 86.8 ? 91 OE2 ? A GLU 140 ? A GLU 140 ? 1_555 CA ? E CA . ? A CA 152 ? 1_555 O ? H HOH . ? A HOH 604 ? 1_555 115.6 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-03-01 2 'Structure model' 1 1 2007-10-16 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2021-10-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' struct_conn 3 4 'Structure model' struct_conn_type 4 4 'Structure model' struct_ref_seq_dif 5 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.conn_type_id' 4 4 'Structure model' '_struct_conn.id' 5 4 'Structure model' '_struct_conn.pdbx_dist_value' 6 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 7 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 8 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 9 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 10 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 11 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 12 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 13 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 14 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 15 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 16 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 17 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 18 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 19 4 'Structure model' '_struct_conn_type.id' 20 4 'Structure model' '_struct_ref_seq_dif.details' 21 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 22 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 23 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.1 ? 1 DENZO 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 SHARP phasing . ? 4 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASN _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 42 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -116.25 _pdbx_validate_torsion.psi 66.41 # _pdbx_validate_chiral.id 1 _pdbx_validate_chiral.PDB_model_num 1 _pdbx_validate_chiral.auth_atom_id C4 _pdbx_validate_chiral.label_alt_id ? _pdbx_validate_chiral.auth_asym_id A _pdbx_validate_chiral.auth_comp_id MPD _pdbx_validate_chiral.auth_seq_id 400 _pdbx_validate_chiral.PDB_ins_code ? _pdbx_validate_chiral.details 'WRONG HAND' _pdbx_validate_chiral.omega . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 A GLU 114 ? CG ? A GLU 114 CG 2 1 Y 0 A GLU 114 ? CD ? A GLU 114 CD 3 1 Y 0 A GLU 114 ? OE1 ? A GLU 114 OE1 4 1 Y 0 A GLU 114 ? OE2 ? A GLU 114 OE2 5 1 Y 0 A LYS 115 ? CG ? A LYS 115 CG 6 1 Y 0 A LYS 115 ? CD ? A LYS 115 CD 7 1 Y 0 A LYS 115 ? CE ? A LYS 115 CE 8 1 Y 0 A LYS 115 ? NZ ? A LYS 115 NZ 9 1 Y 0 A LEU 116 ? CG ? A LEU 116 CG 10 1 Y 0 A LEU 116 ? CD1 ? A LEU 116 CD1 11 1 Y 0 A LEU 116 ? CD2 ? A LEU 116 CD2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ALA 1 ? A ALA 1 2 1 Y 1 A ASP 2 ? A ASP 2 3 1 Y 1 A LYS 148 ? A LYS 148 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CALCIUM ION' CA 3 '(4S)-2-METHYL-2,4-PENTANEDIOL' MPD 4 'TERTIARY-BUTYL ALCOHOL' TBU 5 water HOH #