data_1Y9H # _entry.id 1Y9H # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.391 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1Y9H pdb_00001y9h 10.2210/pdb1y9h/pdb RCSB RCSB031284 ? ? WWPDB D_1000031284 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-03-22 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-02 5 'Structure model' 1 4 2024-04-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' 5 5 'Structure model' Advisory 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_struct_assembly 3 4 'Structure model' pdbx_struct_oper_list 4 4 'Structure model' struct_conn 5 4 'Structure model' struct_site 6 5 'Structure model' chem_comp_atom 7 5 'Structure model' chem_comp_bond 8 5 'Structure model' database_PDB_caveat 9 5 'Structure model' ndb_struct_conf_na 10 5 'Structure model' ndb_struct_na_base_pair 11 5 'Structure model' ndb_struct_na_base_pair_step 12 5 'Structure model' pdbx_validate_close_contact 13 5 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 4 'Structure model' '_struct_site.pdbx_auth_seq_id' 7 5 'Structure model' '_ndb_struct_na_base_pair.hbond_type_12' 8 5 'Structure model' '_ndb_struct_na_base_pair_step.twist' # loop_ _database_PDB_caveat.id _database_PDB_caveat.text 1 ;BAP A 23 HAS WRONG CHIRALITY AT ATOM C1' ; 2 ;BAP A 23 HAS WRONG CHIRALITY AT ATOM C2' ; 3 ;BAP A 23 HAS WRONG CHIRALITY AT ATOM C3' ; # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1Y9H _pdbx_database_status.recvd_initial_deposition_date 2004-12-15 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Zhang, N.' 1 'Lin, C.' 2 'Huang, X.' 3 'Kolbanovskiy, A.' 4 'Hingerty, B.E.' 5 'Amin, S.' 6 'Broyde, S.' 7 'Geacintov, N.E.' 8 'Patel, D.J.' 9 # _citation.id primary _citation.title ;Methylation of cytosine at C5 in a CpG sequence context causes a conformational switch of a benzo[a]pyrene diol epoxide-N2-guanine adduct in DNA from a minor groove alignment to intercalation with base displacement. ; _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 346 _citation.page_first 951 _citation.page_last 965 _citation.year 2005 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15701509 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2004.12.027 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zhang, N.' 1 ? primary 'Lin, C.' 2 ? primary 'Huang, X.' 3 ? primary 'Kolbanovskiy, A.' 4 ? primary 'Hingerty, B.E.' 5 ? primary 'Amin, S.' 6 ? primary 'Broyde, S.' 7 ? primary 'Geacintov, N.E.' 8 ? primary 'Patel, D.J.' 9 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*CP*CP*AP*TP*(5CM)P*(BPG)P*CP*TP*AP*CP*C)-3'" 3268.165 1 ? ? ? ? 2 polymer syn "5'-D(*GP*GP*TP*AP*GP*CP*GP*AP*TP*GP*G)-3'" 3454.258 1 ? ? ? ? 3 non-polymer syn '1,2,3-TRIHYDROXY-1,2,3,4-TETRAHYDROBENZO[A]PYRENE' 304.339 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no yes '(DC)(DC)(DA)(DT)(5CM)(DG)(DC)(DT)(DA)(DC)(DC)' CCATCGCTACC A ? 2 polydeoxyribonucleotide no no '(DG)(DG)(DT)(DA)(DG)(DC)(DG)(DA)(DT)(DG)(DG)' GGTAGCGATGG B ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name '1,2,3-TRIHYDROXY-1,2,3,4-TETRAHYDROBENZO[A]PYRENE' _pdbx_entity_nonpoly.comp_id BAP # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DC n 1 3 DA n 1 4 DT n 1 5 5CM n 1 6 DG n 1 7 DC n 1 8 DT n 1 9 DA n 1 10 DC n 1 11 DC n 2 1 DG n 2 2 DG n 2 3 DT n 2 4 DA n 2 5 DG n 2 6 DC n 2 7 DG n 2 8 DA n 2 9 DT n 2 10 DG n 2 11 DG n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'BP ATTACHED TO G6, Methylation of C5' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 5CM 'DNA linking' n "5-METHYL-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE" ? 'C10 H16 N3 O7 P' 321.224 BAP non-polymer . '1,2,3-TRIHYDROXY-1,2,3,4-TETRAHYDROBENZO[A]PYRENE' ? 'C20 H16 O3' 304.339 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC C A . n A 1 2 DC 2 2 2 DC C A . n A 1 3 DA 3 3 3 DA A A . n A 1 4 DT 4 4 4 DT T A . n A 1 5 5CM 5 5 5 5CM 5CM A . n A 1 6 DG 6 6 6 DG G A . n A 1 7 DC 7 7 7 DC C A . n A 1 8 DT 8 8 8 DT T A . n A 1 9 DA 9 9 9 DA A A . n A 1 10 DC 10 10 10 DC C A . n A 1 11 DC 11 11 11 DC C A . n B 2 1 DG 1 12 12 DG G B . n B 2 2 DG 2 13 13 DG G B . n B 2 3 DT 3 14 14 DT T B . n B 2 4 DA 4 15 15 DA A B . n B 2 5 DG 5 16 16 DG G B . n B 2 6 DC 6 17 17 DC C B . n B 2 7 DG 7 18 18 DG G B . n B 2 8 DA 8 19 19 DA A B . n B 2 9 DT 9 20 20 DT T B . n B 2 10 DG 10 21 21 DG G B . n B 2 11 DG 11 22 22 DG G B . n # _pdbx_nonpoly_scheme.asym_id C _pdbx_nonpoly_scheme.entity_id 3 _pdbx_nonpoly_scheme.mon_id BAP _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 23 _pdbx_nonpoly_scheme.auth_seq_num 23 _pdbx_nonpoly_scheme.pdb_mon_id BAP _pdbx_nonpoly_scheme.auth_mon_id BP _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code . # _exptl.entry_id 1Y9H _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type ? # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _database_PDB_matrix.entry_id 1Y9H _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1Y9H _struct.title ;Methylation of cytosine at C5 in a CpG sequence context causes a conformational switch of a benzo[a]pyrene diol epoxide-N2-guanine adduct in DNA from a minor groove alignment to intercalation with base displacement ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1Y9H _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'conformational switch, cytosine methylation, p53 mutation hot spot, DNA adduct, benzo[a]pyrene, BPDE, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_ref.id _struct_ref.entity_id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 1 PDB 1Y9H 1Y9H ? ? ? 2 2 PDB 1Y9H 1Y9H ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1Y9H A 1 ? 11 ? 1Y9H 1 ? 11 ? 1 11 2 2 1Y9H B 1 ? 11 ? 1Y9H 12 ? 22 ? 12 22 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A DT 4 "O3'" ? ? ? 1_555 A 5CM 5 P ? ? A DT 4 A 5CM 5 1_555 ? ? ? ? ? ? ? 1.590 ? ? covale2 covale both ? A 5CM 5 "O3'" ? ? ? 1_555 A DG 6 P ? ? A 5CM 5 A DG 6 1_555 ? ? ? ? ? ? ? 1.606 ? ? covale3 covale none ? A DG 6 N2 ? ? ? 1_555 C BAP . "C4'" ? ? A DG 6 A BAP 23 1_555 ? ? ? ? ? ? ? 1.488 ? ? hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 B DG 11 N1 ? ? A DC 1 B DG 22 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog2 hydrog ? ? A DC 2 N3 ? ? ? 1_555 B DG 10 N1 ? ? A DC 2 B DG 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 2 N4 ? ? ? 1_555 B DG 10 O6 ? ? A DC 2 B DG 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 2 O2 ? ? ? 1_555 B DG 10 N2 ? ? A DC 2 B DG 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DA 3 N1 ? ? ? 1_555 B DT 9 N3 ? ? A DA 3 B DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DA 3 N6 ? ? ? 1_555 B DT 9 O4 ? ? A DA 3 B DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DT 4 N3 ? ? ? 1_555 B DA 8 N1 ? ? A DT 4 B DA 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DT 4 O4 ? ? ? 1_555 B DA 8 N6 ? ? A DT 4 B DA 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A 5CM 5 N3 ? ? ? 1_555 B DG 7 N1 ? ? A 5CM 5 B DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A 5CM 5 N4 ? ? ? 1_555 B DG 7 O6 ? ? A 5CM 5 B DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A 5CM 5 O2 ? ? ? 1_555 B DG 7 N2 ? ? A 5CM 5 B DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DC 7 N3 ? ? ? 1_555 B DG 5 N1 ? ? A DC 7 B DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 7 N4 ? ? ? 1_555 B DG 5 O6 ? ? A DC 7 B DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 7 O2 ? ? ? 1_555 B DG 5 N2 ? ? A DC 7 B DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DT 8 N3 ? ? ? 1_555 B DA 4 N1 ? ? A DT 8 B DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DT 8 O4 ? ? ? 1_555 B DA 4 N6 ? ? A DT 8 B DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DA 9 N1 ? ? ? 1_555 B DT 3 N3 ? ? A DA 9 B DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DA 9 N6 ? ? ? 1_555 B DT 3 O4 ? ? A DA 9 B DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DC 10 N3 ? ? ? 1_555 B DG 2 N1 ? ? A DC 10 B DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DC 10 N4 ? ? ? 1_555 B DG 2 O6 ? ? A DC 10 B DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DC 10 O2 ? ? ? 1_555 B DG 2 N2 ? ? A DC 10 B DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DC 11 N3 ? ? ? 1_555 B DG 1 N1 ? ? A DC 11 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DC 11 N4 ? ? ? 1_555 B DG 1 O6 ? ? A DC 11 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DC 11 O2 ? ? ? 1_555 B DG 1 N2 ? ? A DC 11 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id BAP _struct_site.pdbx_auth_seq_id 23 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 6 _struct_site.details 'BINDING SITE FOR RESIDUE BAP A 23' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 5CM A 5 ? 5CM A 5 . ? 1_555 ? 2 AC1 6 DG A 6 ? DG A 6 . ? 1_555 ? 3 AC1 6 DC A 7 ? DC A 7 . ? 1_555 ? 4 AC1 6 DT A 8 ? DT A 8 . ? 1_555 ? 5 AC1 6 DG B 5 ? DG B 16 . ? 1_555 ? 6 AC1 6 DG B 7 ? DG B 18 . ? 1_555 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O2 A DC 11 ? ? H21 B DG 12 ? ? 1.55 2 1 O2 A 5CM 5 ? ? H21 B DG 18 ? ? 1.55 3 2 O2 A 5CM 5 ? ? H21 B DG 18 ? ? 1.55 4 2 O2 A DC 11 ? ? H21 B DG 12 ? ? 1.58 5 3 O2 A 5CM 5 ? ? H21 B DG 18 ? ? 1.54 6 3 O2 A DC 2 ? ? H21 B DG 21 ? ? 1.56 7 4 O2 A DC 11 ? ? H21 B DG 12 ? ? 1.54 8 4 O2 A DC 10 ? ? H21 B DG 13 ? ? 1.59 9 5 O2 A DC 11 ? ? H21 B DG 12 ? ? 1.58 10 5 O2 A DC 1 ? ? H21 B DG 22 ? ? 1.59 11 6 O2 A DC 11 ? ? H21 B DG 12 ? ? 1.55 12 7 O2 A 5CM 5 ? ? H21 B DG 18 ? ? 1.60 13 8 O2 A 5CM 5 ? ? H21 B DG 18 ? ? 1.52 14 8 O2 A DC 11 ? ? H21 B DG 12 ? ? 1.53 15 8 O2 A DC 1 ? ? H21 B DG 22 ? ? 1.56 16 9 O2 A 5CM 5 ? ? H21 B DG 18 ? ? 1.57 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "C3'" A DT 4 ? ? "C2'" A DT 4 ? ? 1.446 1.516 -0.070 0.008 N 2 1 C5 A DT 4 ? ? C7 A DT 4 ? ? 1.535 1.496 0.039 0.006 N 3 1 C5 A DT 8 ? ? C7 A DT 8 ? ? 1.546 1.496 0.050 0.006 N 4 1 "C4'" A DA 9 ? ? "C3'" A DA 9 ? ? 1.461 1.521 -0.060 0.010 N 5 1 "C3'" A DA 9 ? ? "C2'" A DA 9 ? ? 1.465 1.516 -0.051 0.008 N 6 1 "C3'" A DC 11 ? ? "C2'" A DC 11 ? ? 1.457 1.516 -0.059 0.008 N 7 1 "C2'" A DC 11 ? ? "C1'" A DC 11 ? ? 1.440 1.518 -0.078 0.010 N 8 1 C5 B DT 14 ? ? C7 B DT 14 ? ? 1.540 1.496 0.044 0.006 N 9 1 C5 B DT 20 ? ? C7 B DT 20 ? ? 1.551 1.496 0.055 0.006 N 10 2 "C3'" A DT 4 ? ? "C2'" A DT 4 ? ? 1.436 1.516 -0.080 0.008 N 11 2 C5 A DT 4 ? ? C7 A DT 4 ? ? 1.535 1.496 0.039 0.006 N 12 2 C5 A DT 8 ? ? C7 A DT 8 ? ? 1.546 1.496 0.050 0.006 N 13 2 "C3'" A DA 9 ? ? "C2'" A DA 9 ? ? 1.465 1.516 -0.051 0.008 N 14 2 C5 B DT 14 ? ? C7 B DT 14 ? ? 1.533 1.496 0.037 0.006 N 15 2 C5 B DT 20 ? ? C7 B DT 20 ? ? 1.537 1.496 0.041 0.006 N 16 3 "C3'" A DT 4 ? ? "C2'" A DT 4 ? ? 1.433 1.516 -0.083 0.008 N 17 3 C5 A DT 4 ? ? C7 A DT 4 ? ? 1.538 1.496 0.042 0.006 N 18 3 C5 A DT 8 ? ? C7 A DT 8 ? ? 1.545 1.496 0.049 0.006 N 19 3 "C3'" A DA 9 ? ? "C2'" A DA 9 ? ? 1.458 1.516 -0.058 0.008 N 20 3 C5 B DT 20 ? ? C7 B DT 20 ? ? 1.542 1.496 0.046 0.006 N 21 4 "C3'" A DC 2 ? ? "C2'" A DC 2 ? ? 1.467 1.516 -0.049 0.008 N 22 4 C5 A DT 4 ? ? C7 A DT 4 ? ? 1.539 1.496 0.043 0.006 N 23 4 C5 A DT 8 ? ? C7 A DT 8 ? ? 1.541 1.496 0.045 0.006 N 24 4 "C3'" A DA 9 ? ? "C2'" A DA 9 ? ? 1.465 1.516 -0.051 0.008 N 25 4 C5 B DT 14 ? ? C7 B DT 14 ? ? 1.538 1.496 0.042 0.006 N 26 4 C5 B DT 20 ? ? C7 B DT 20 ? ? 1.543 1.496 0.047 0.006 N 27 5 "C3'" A DC 2 ? ? "C2'" A DC 2 ? ? 1.465 1.516 -0.051 0.008 N 28 5 "C3'" A DT 4 ? ? "C2'" A DT 4 ? ? 1.442 1.516 -0.074 0.008 N 29 5 C5 A DT 8 ? ? C7 A DT 8 ? ? 1.545 1.496 0.049 0.006 N 30 5 "C4'" A DA 9 ? ? "C3'" A DA 9 ? ? 1.457 1.521 -0.064 0.010 N 31 5 "C3'" A DA 9 ? ? "C2'" A DA 9 ? ? 1.464 1.516 -0.052 0.008 N 32 5 C5 B DT 14 ? ? C7 B DT 14 ? ? 1.534 1.496 0.038 0.006 N 33 5 C5 B DT 20 ? ? C7 B DT 20 ? ? 1.536 1.496 0.040 0.006 N 34 6 "C3'" A DC 2 ? ? "C2'" A DC 2 ? ? 1.465 1.516 -0.051 0.008 N 35 6 "C3'" A DT 4 ? ? "C2'" A DT 4 ? ? 1.433 1.516 -0.083 0.008 N 36 6 C5 A DT 4 ? ? C7 A DT 4 ? ? 1.538 1.496 0.042 0.006 N 37 6 C5 A DT 8 ? ? C7 A DT 8 ? ? 1.546 1.496 0.050 0.006 N 38 6 "C3'" A DA 9 ? ? "C2'" A DA 9 ? ? 1.464 1.516 -0.052 0.008 N 39 6 C5 B DT 14 ? ? C7 B DT 14 ? ? 1.537 1.496 0.041 0.006 N 40 6 C5 B DT 20 ? ? C7 B DT 20 ? ? 1.547 1.496 0.051 0.006 N 41 7 "C4'" A DT 4 ? ? "C3'" A DT 4 ? ? 1.456 1.521 -0.065 0.010 N 42 7 "C3'" A DT 4 ? ? "C2'" A DT 4 ? ? 1.463 1.516 -0.053 0.008 N 43 7 C5 A DT 4 ? ? C7 A DT 4 ? ? 1.542 1.496 0.046 0.006 N 44 7 C5 A DT 8 ? ? C7 A DT 8 ? ? 1.543 1.496 0.047 0.006 N 45 7 "C4'" A DA 9 ? ? "C3'" A DA 9 ? ? 1.459 1.521 -0.062 0.010 N 46 7 "C3'" A DA 9 ? ? "C2'" A DA 9 ? ? 1.460 1.516 -0.056 0.008 N 47 7 "C3'" A DC 11 ? ? "C2'" A DC 11 ? ? 1.456 1.516 -0.060 0.008 N 48 7 "C2'" A DC 11 ? ? "C1'" A DC 11 ? ? 1.441 1.518 -0.077 0.010 N 49 7 C5 B DT 20 ? ? C7 B DT 20 ? ? 1.534 1.496 0.038 0.006 N 50 8 "C3'" A DT 4 ? ? "C2'" A DT 4 ? ? 1.441 1.516 -0.075 0.008 N 51 8 C5 A DT 4 ? ? C7 A DT 4 ? ? 1.535 1.496 0.039 0.006 N 52 8 C5 A DT 8 ? ? C7 A DT 8 ? ? 1.543 1.496 0.047 0.006 N 53 8 "C4'" A DA 9 ? ? "C3'" A DA 9 ? ? 1.448 1.521 -0.073 0.010 N 54 8 "C3'" A DA 9 ? ? "C2'" A DA 9 ? ? 1.463 1.516 -0.053 0.008 N 55 8 C5 B DT 20 ? ? C7 B DT 20 ? ? 1.544 1.496 0.048 0.006 N 56 9 "C3'" A DC 2 ? ? "C2'" A DC 2 ? ? 1.467 1.516 -0.049 0.008 N 57 9 "C3'" A DT 4 ? ? "C2'" A DT 4 ? ? 1.435 1.516 -0.081 0.008 N 58 9 C5 A DT 4 ? ? C7 A DT 4 ? ? 1.535 1.496 0.039 0.006 N 59 9 C5 A DT 8 ? ? C7 A DT 8 ? ? 1.545 1.496 0.049 0.006 N 60 9 "C3'" A DA 9 ? ? "C2'" A DA 9 ? ? 1.462 1.516 -0.054 0.008 N 61 9 C5 B DT 20 ? ? C7 B DT 20 ? ? 1.547 1.496 0.051 0.006 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? "C2'" A DC 1 ? ? 96.07 105.90 -9.83 0.80 N 2 1 "C3'" A DC 1 ? ? "O3'" A DC 1 ? ? P A DC 2 ? ? 128.67 119.70 8.97 1.20 Y 3 1 N1 A DC 2 ? ? C2 A DC 2 ? ? O2 A DC 2 ? ? 122.66 118.90 3.76 0.60 N 4 1 "O4'" A DA 3 ? ? "C1'" A DA 3 ? ? "C2'" A DA 3 ? ? 99.95 105.90 -5.95 0.80 N 5 1 "O4'" A DT 4 ? ? "C4'" A DT 4 ? ? "C3'" A DT 4 ? ? 109.77 106.00 3.77 0.60 N 6 1 "C5'" A DT 4 ? ? "C4'" A DT 4 ? ? "C3'" A DT 4 ? ? 124.72 115.70 9.02 1.20 N 7 1 "C4'" A DT 4 ? ? "C3'" A DT 4 ? ? "C2'" A DT 4 ? ? 95.77 102.20 -6.43 0.70 N 8 1 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? "C2'" A DT 4 ? ? 97.03 105.90 -8.87 0.80 N 9 1 "C4'" A DG 6 ? ? "C3'" A DG 6 ? ? "C2'" A DG 6 ? ? 97.05 102.20 -5.15 0.70 N 10 1 "O4'" A DC 7 ? ? "C1'" A DC 7 ? ? N1 A DC 7 ? ? 111.21 108.30 2.91 0.30 N 11 1 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 103.48 108.00 -4.52 0.70 N 12 1 "C4'" A DA 9 ? ? "C3'" A DA 9 ? ? "C2'" A DA 9 ? ? 96.05 102.20 -6.15 0.70 N 13 1 "O4'" A DA 9 ? ? "C1'" A DA 9 ? ? "C2'" A DA 9 ? ? 98.38 105.90 -7.52 0.80 N 14 1 "O4'" A DA 9 ? ? "C1'" A DA 9 ? ? N9 A DA 9 ? ? 103.62 108.00 -4.38 0.70 N 15 1 P A DC 10 ? ? "O5'" A DC 10 ? ? "C5'" A DC 10 ? ? 130.87 120.90 9.97 1.60 N 16 1 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? "C2'" A DC 10 ? ? 97.37 105.90 -8.53 0.80 N 17 1 N1 A DC 10 ? ? "C1'" A DC 10 ? ? "C2'" A DC 10 ? ? 123.97 114.30 9.67 1.40 N 18 1 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 101.34 108.00 -6.66 0.70 N 19 1 "C4'" A DC 11 ? ? "C3'" A DC 11 ? ? "C2'" A DC 11 ? ? 94.57 102.20 -7.63 0.70 N 20 1 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? "C2'" A DC 11 ? ? 99.45 105.90 -6.45 0.80 N 21 1 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? N1 A DC 11 ? ? 114.40 108.30 6.10 0.30 N 22 1 "C4'" B DG 13 ? ? "C3'" B DG 13 ? ? "C2'" B DG 13 ? ? 95.54 102.20 -6.66 0.70 N 23 1 "C4'" B DT 14 ? ? "C3'" B DT 14 ? ? "C2'" B DT 14 ? ? 95.12 102.20 -7.08 0.70 N 24 1 "O4'" B DT 14 ? ? "C1'" B DT 14 ? ? "C2'" B DT 14 ? ? 99.95 105.90 -5.95 0.80 N 25 1 "O4'" B DT 14 ? ? "C1'" B DT 14 ? ? N1 B DT 14 ? ? 112.40 108.30 4.10 0.30 N 26 1 "O4'" B DA 15 ? ? "C1'" B DA 15 ? ? N9 B DA 15 ? ? 102.55 108.00 -5.45 0.70 N 27 1 "C3'" B DG 16 ? ? "C2'" B DG 16 ? ? "C1'" B DG 16 ? ? 97.21 102.40 -5.19 0.80 N 28 1 "O4'" B DG 16 ? ? "C1'" B DG 16 ? ? "C2'" B DG 16 ? ? 98.81 105.90 -7.09 0.80 N 29 1 "O3'" B DC 17 ? ? P B DG 18 ? ? "O5'" B DG 18 ? ? 91.92 104.00 -12.08 1.90 Y 30 1 "O4'" B DG 18 ? ? "C1'" B DG 18 ? ? N9 B DG 18 ? ? 110.80 108.30 2.50 0.30 N 31 1 "O4'" B DT 20 ? ? "C4'" B DT 20 ? ? "C3'" B DT 20 ? ? 111.28 106.00 5.28 0.60 N 32 1 "C5'" B DT 20 ? ? "C4'" B DT 20 ? ? "C3'" B DT 20 ? ? 125.11 115.70 9.41 1.20 N 33 1 "C4'" B DT 20 ? ? "C3'" B DT 20 ? ? "C2'" B DT 20 ? ? 89.89 102.20 -12.31 0.70 N 34 1 "O4'" B DT 20 ? ? "C1'" B DT 20 ? ? "C2'" B DT 20 ? ? 97.82 105.90 -8.08 0.80 N 35 1 N1 B DT 20 ? ? "C1'" B DT 20 ? ? "C2'" B DT 20 ? ? 123.65 114.30 9.35 1.40 N 36 1 "O4'" B DT 20 ? ? "C1'" B DT 20 ? ? N1 B DT 20 ? ? 102.47 108.00 -5.53 0.70 N 37 1 C4 B DT 20 ? ? C5 B DT 20 ? ? C7 B DT 20 ? ? 125.22 119.00 6.22 0.60 N 38 1 C6 B DT 20 ? ? C5 B DT 20 ? ? C7 B DT 20 ? ? 116.67 122.90 -6.23 0.60 N 39 1 "C5'" B DG 21 ? ? "C4'" B DG 21 ? ? "O4'" B DG 21 ? ? 118.11 109.80 8.31 1.10 N 40 1 "O4'" B DG 21 ? ? "C1'" B DG 21 ? ? "C2'" B DG 21 ? ? 99.34 105.90 -6.56 0.80 N 41 1 "C4'" B DG 22 ? ? "C3'" B DG 22 ? ? "C2'" B DG 22 ? ? 97.90 102.20 -4.30 0.70 N 42 2 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? "C2'" A DC 1 ? ? 98.16 105.90 -7.74 0.80 N 43 2 N1 A DC 1 ? ? C2 A DC 1 ? ? O2 A DC 1 ? ? 122.91 118.90 4.01 0.60 N 44 2 "C3'" A DC 1 ? ? "O3'" A DC 1 ? ? P A DC 2 ? ? 128.68 119.70 8.98 1.20 Y 45 2 C6 A DA 3 ? ? N1 A DA 3 ? ? C2 A DA 3 ? ? 122.53 118.60 3.93 0.60 N 46 2 "O4'" A DT 4 ? ? "C4'" A DT 4 ? ? "C3'" A DT 4 ? ? 109.78 106.00 3.78 0.60 N 47 2 "C5'" A DT 4 ? ? "C4'" A DT 4 ? ? "C3'" A DT 4 ? ? 124.87 115.70 9.17 1.20 N 48 2 "C4'" A DT 4 ? ? "C3'" A DT 4 ? ? "C2'" A DT 4 ? ? 95.39 102.20 -6.81 0.70 N 49 2 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? "C2'" A DT 4 ? ? 97.02 105.90 -8.88 0.80 N 50 2 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 111.72 108.30 3.42 0.30 N 51 2 "C3'" A DT 4 ? ? "O3'" A DT 4 ? ? P A 5CM 5 ? ? 127.24 119.70 7.54 1.20 Y 52 2 "C4'" A DG 6 ? ? "C3'" A DG 6 ? ? "C2'" A DG 6 ? ? 96.85 102.20 -5.35 0.70 N 53 2 "O4'" A DC 7 ? ? "C1'" A DC 7 ? ? N1 A DC 7 ? ? 111.16 108.30 2.86 0.30 N 54 2 "O4'" A DA 9 ? ? "C4'" A DA 9 ? ? "C3'" A DA 9 ? ? 109.70 106.00 3.70 0.60 N 55 2 "C4'" A DA 9 ? ? "C3'" A DA 9 ? ? "C2'" A DA 9 ? ? 94.16 102.20 -8.04 0.70 N 56 2 "O4'" A DA 9 ? ? "C1'" A DA 9 ? ? "C2'" A DA 9 ? ? 100.30 105.90 -5.60 0.80 N 57 2 "O4'" A DA 9 ? ? "C1'" A DA 9 ? ? N9 A DA 9 ? ? 101.44 108.00 -6.56 0.70 N 58 2 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? "C2'" A DC 10 ? ? 99.68 105.90 -6.22 0.80 N 59 2 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 103.37 108.00 -4.63 0.70 N 60 2 "C1'" A DC 11 ? ? "O4'" A DC 11 ? ? "C4'" A DC 11 ? ? 103.02 110.10 -7.08 1.00 N 61 2 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? "C2'" A DC 11 ? ? 99.67 105.90 -6.23 0.80 N 62 2 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? N1 A DC 11 ? ? 110.96 108.30 2.66 0.30 N 63 2 "C4'" B DG 13 ? ? "C3'" B DG 13 ? ? "C2'" B DG 13 ? ? 95.51 102.20 -6.69 0.70 N 64 2 "C4'" B DT 14 ? ? "C3'" B DT 14 ? ? "C2'" B DT 14 ? ? 94.81 102.20 -7.39 0.70 N 65 2 "O4'" B DT 14 ? ? "C1'" B DT 14 ? ? "C2'" B DT 14 ? ? 100.67 105.90 -5.23 0.80 N 66 2 "O4'" B DT 14 ? ? "C1'" B DT 14 ? ? N1 B DT 14 ? ? 112.33 108.30 4.03 0.30 N 67 2 "O4'" B DA 15 ? ? "C4'" B DA 15 ? ? "C3'" B DA 15 ? ? 109.76 106.00 3.76 0.60 N 68 2 "O4'" B DA 15 ? ? "C1'" B DA 15 ? ? "C2'" B DA 15 ? ? 100.57 105.90 -5.33 0.80 N 69 2 "O4'" B DA 15 ? ? "C1'" B DA 15 ? ? N9 B DA 15 ? ? 103.59 108.00 -4.41 0.70 N 70 2 "C4'" B DG 16 ? ? "C3'" B DG 16 ? ? "C2'" B DG 16 ? ? 97.97 102.20 -4.23 0.70 N 71 2 "C3'" B DG 16 ? ? "C2'" B DG 16 ? ? "C1'" B DG 16 ? ? 95.74 102.40 -6.66 0.80 N 72 2 "O4'" B DG 16 ? ? "C1'" B DG 16 ? ? "C2'" B DG 16 ? ? 98.45 105.90 -7.45 0.80 N 73 2 C6 B DC 17 ? ? N1 B DC 17 ? ? C2 B DC 17 ? ? 122.81 120.30 2.51 0.40 N 74 2 "C4'" B DG 18 ? ? "C3'" B DG 18 ? ? "C2'" B DG 18 ? ? 95.71 102.20 -6.49 0.70 N 75 2 "O4'" B DG 18 ? ? "C1'" B DG 18 ? ? "C2'" B DG 18 ? ? 101.07 105.90 -4.83 0.80 N 76 2 "O4'" B DG 18 ? ? "C1'" B DG 18 ? ? N9 B DG 18 ? ? 112.97 108.30 4.67 0.30 N 77 2 "C4'" B DA 19 ? ? "C3'" B DA 19 ? ? "C2'" B DA 19 ? ? 96.20 102.20 -6.00 0.70 N 78 2 "O4'" B DT 20 ? ? "C4'" B DT 20 ? ? "C3'" B DT 20 ? ? 112.25 106.00 6.25 0.60 N 79 2 "C5'" B DT 20 ? ? "C4'" B DT 20 ? ? "C3'" B DT 20 ? ? 124.58 115.70 8.88 1.20 N 80 2 "C4'" B DT 20 ? ? "C3'" B DT 20 ? ? "C2'" B DT 20 ? ? 91.11 102.20 -11.09 0.70 N 81 2 "O4'" B DT 20 ? ? "C1'" B DT 20 ? ? "C2'" B DT 20 ? ? 97.02 105.90 -8.88 0.80 N 82 2 N1 B DT 20 ? ? "C1'" B DT 20 ? ? "C2'" B DT 20 ? ? 125.37 114.30 11.07 1.40 N 83 2 "O4'" B DT 20 ? ? "C1'" B DT 20 ? ? N1 B DT 20 ? ? 98.61 108.00 -9.39 0.70 N 84 2 C4 B DT 20 ? ? C5 B DT 20 ? ? C7 B DT 20 ? ? 123.78 119.00 4.78 0.60 N 85 2 C6 B DT 20 ? ? C5 B DT 20 ? ? C7 B DT 20 ? ? 117.45 122.90 -5.45 0.60 N 86 2 "C3'" B DG 21 ? ? "O3'" B DG 21 ? ? P B DG 22 ? ? 128.54 119.70 8.84 1.20 Y 87 3 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? "C2'" A DC 1 ? ? 97.98 105.90 -7.92 0.80 N 88 3 "C3'" A DC 1 ? ? "O3'" A DC 1 ? ? P A DC 2 ? ? 129.60 119.70 9.90 1.20 Y 89 3 "C5'" A DT 4 ? ? "C4'" A DT 4 ? ? "C3'" A DT 4 ? ? 126.16 115.70 10.46 1.20 N 90 3 "C4'" A DT 4 ? ? "C3'" A DT 4 ? ? "C2'" A DT 4 ? ? 93.47 102.20 -8.73 0.70 N 91 3 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? "C2'" A DT 4 ? ? 95.84 105.90 -10.06 0.80 N 92 3 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 111.47 108.30 3.17 0.30 N 93 3 "C4'" A DG 6 ? ? "C3'" A DG 6 ? ? "C2'" A DG 6 ? ? 97.46 102.20 -4.74 0.70 N 94 3 "C4'" A DC 7 ? ? "C3'" A DC 7 ? ? "C2'" A DC 7 ? ? 97.46 102.20 -4.74 0.70 N 95 3 "O4'" A DC 7 ? ? "C1'" A DC 7 ? ? N1 A DC 7 ? ? 111.51 108.30 3.21 0.30 N 96 3 "C4'" A DT 8 ? ? "C3'" A DT 8 ? ? "C2'" A DT 8 ? ? 97.53 102.20 -4.67 0.70 N 97 3 "C4'" A DA 9 ? ? "C3'" A DA 9 ? ? "C2'" A DA 9 ? ? 94.19 102.20 -8.01 0.70 N 98 3 "O4'" A DA 9 ? ? "C1'" A DA 9 ? ? "C2'" A DA 9 ? ? 100.71 105.90 -5.19 0.80 N 99 3 "O4'" A DA 9 ? ? "C1'" A DA 9 ? ? N9 A DA 9 ? ? 103.15 108.00 -4.85 0.70 N 100 3 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? "C2'" A DC 10 ? ? 99.74 105.90 -6.16 0.80 N 101 3 N1 A DC 10 ? ? "C1'" A DC 10 ? ? "C2'" A DC 10 ? ? 124.02 114.30 9.72 1.40 N 102 3 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 100.09 108.00 -7.91 0.70 N 103 3 "O5'" A DC 11 ? ? "C5'" A DC 11 ? ? "C4'" A DC 11 ? ? 104.21 109.40 -5.19 0.80 N 104 3 "C1'" A DC 11 ? ? "O4'" A DC 11 ? ? "C4'" A DC 11 ? ? 100.86 110.10 -9.24 1.00 N 105 3 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? N1 A DC 11 ? ? 112.26 108.30 3.96 0.30 N 106 3 "C4'" B DG 13 ? ? "C3'" B DG 13 ? ? "C2'" B DG 13 ? ? 95.01 102.20 -7.19 0.70 N 107 3 "C4'" B DT 14 ? ? "C3'" B DT 14 ? ? "C2'" B DT 14 ? ? 95.18 102.20 -7.02 0.70 N 108 3 "O4'" B DT 14 ? ? "C1'" B DT 14 ? ? N1 B DT 14 ? ? 114.44 108.30 6.14 0.30 N 109 3 "O4'" B DA 15 ? ? "C1'" B DA 15 ? ? N9 B DA 15 ? ? 102.85 108.00 -5.15 0.70 N 110 3 "C4'" B DG 16 ? ? "C3'" B DG 16 ? ? "C2'" B DG 16 ? ? 96.93 102.20 -5.27 0.70 N 111 3 "O4'" B DG 16 ? ? "C1'" B DG 16 ? ? "C2'" B DG 16 ? ? 98.50 105.90 -7.40 0.80 N 112 3 "C3'" B DC 17 ? ? "C2'" B DC 17 ? ? "C1'" B DC 17 ? ? 96.64 102.40 -5.76 0.80 N 113 3 "C4'" B DG 18 ? ? "C3'" B DG 18 ? ? "C2'" B DG 18 ? ? 96.61 102.20 -5.59 0.70 N 114 3 "O4'" B DG 18 ? ? "C1'" B DG 18 ? ? N9 B DG 18 ? ? 111.59 108.30 3.29 0.30 N 115 3 "C4'" B DA 19 ? ? "C3'" B DA 19 ? ? "C2'" B DA 19 ? ? 97.67 102.20 -4.53 0.70 N 116 3 "O4'" B DT 20 ? ? "C4'" B DT 20 ? ? "C3'" B DT 20 ? ? 112.50 106.00 6.50 0.60 N 117 3 "C5'" B DT 20 ? ? "C4'" B DT 20 ? ? "C3'" B DT 20 ? ? 125.43 115.70 9.73 1.20 N 118 3 "C4'" B DT 20 ? ? "C3'" B DT 20 ? ? "C2'" B DT 20 ? ? 90.46 102.20 -11.74 0.70 N 119 3 "O4'" B DT 20 ? ? "C1'" B DT 20 ? ? "C2'" B DT 20 ? ? 97.83 105.90 -8.07 0.80 N 120 3 N1 B DT 20 ? ? "C1'" B DT 20 ? ? "C2'" B DT 20 ? ? 122.82 114.30 8.52 1.40 N 121 3 "O4'" B DT 20 ? ? "C1'" B DT 20 ? ? N1 B DT 20 ? ? 100.97 108.00 -7.03 0.70 N 122 3 C4 B DT 20 ? ? C5 B DT 20 ? ? C7 B DT 20 ? ? 124.47 119.00 5.47 0.60 N 123 3 C6 B DT 20 ? ? C5 B DT 20 ? ? C7 B DT 20 ? ? 117.01 122.90 -5.89 0.60 N 124 3 "C5'" B DG 21 ? ? "C4'" B DG 21 ? ? "O4'" B DG 21 ? ? 117.09 109.80 7.29 1.10 N 125 3 "O4'" B DG 21 ? ? "C1'" B DG 21 ? ? N9 B DG 21 ? ? 102.19 108.00 -5.81 0.70 N 126 3 "C3'" B DG 21 ? ? "O3'" B DG 21 ? ? P B DG 22 ? ? 128.01 119.70 8.31 1.20 Y 127 3 "C4'" B DG 22 ? ? "C3'" B DG 22 ? ? "C2'" B DG 22 ? ? 97.59 102.20 -4.61 0.70 N 128 4 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? "C2'" A DC 1 ? ? 99.07 105.90 -6.83 0.80 N 129 4 N1 A DC 1 ? ? C2 A DC 1 ? ? O2 A DC 1 ? ? 122.74 118.90 3.84 0.60 N 130 4 "C3'" A DC 1 ? ? "O3'" A DC 1 ? ? P A DC 2 ? ? 129.77 119.70 10.07 1.20 Y 131 4 "O4'" A DA 3 ? ? "C1'" A DA 3 ? ? "C2'" A DA 3 ? ? 101.03 105.90 -4.87 0.80 N 132 4 N9 A DA 3 ? ? "C1'" A DA 3 ? ? "C2'" A DA 3 ? ? 123.67 114.30 9.37 1.40 N 133 4 "O4'" A DA 3 ? ? "C1'" A DA 3 ? ? N9 A DA 3 ? ? 102.58 108.00 -5.42 0.70 N 134 4 "O4'" A DT 4 ? ? "C4'" A DT 4 ? ? "C3'" A DT 4 ? ? 109.68 106.00 3.68 0.60 N 135 4 "C5'" A DT 4 ? ? "C4'" A DT 4 ? ? "C3'" A DT 4 ? ? 126.16 115.70 10.46 1.20 N 136 4 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? "C2'" A DT 4 ? ? 97.34 105.90 -8.56 0.80 N 137 4 "C4'" A DG 6 ? ? "C3'" A DG 6 ? ? "C2'" A DG 6 ? ? 97.52 102.20 -4.68 0.70 N 138 4 "C4'" A DC 7 ? ? "C3'" A DC 7 ? ? "C2'" A DC 7 ? ? 97.27 102.20 -4.93 0.70 N 139 4 "O4'" A DC 7 ? ? "C1'" A DC 7 ? ? N1 A DC 7 ? ? 112.07 108.30 3.77 0.30 N 140 4 "O4'" A DA 9 ? ? "C4'" A DA 9 ? ? "C3'" A DA 9 ? ? 109.99 106.00 3.99 0.60 N 141 4 "C4'" A DA 9 ? ? "C3'" A DA 9 ? ? "C2'" A DA 9 ? ? 95.15 102.20 -7.05 0.70 N 142 4 "O4'" A DA 9 ? ? "C1'" A DA 9 ? ? "C2'" A DA 9 ? ? 99.75 105.90 -6.15 0.80 N 143 4 "O4'" A DA 9 ? ? "C1'" A DA 9 ? ? N9 A DA 9 ? ? 101.13 108.00 -6.87 0.70 N 144 4 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? "C2'" A DC 10 ? ? 100.08 105.90 -5.82 0.80 N 145 4 N1 A DC 10 ? ? "C1'" A DC 10 ? ? "C2'" A DC 10 ? ? 124.79 114.30 10.49 1.40 N 146 4 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 100.82 108.00 -7.18 0.70 N 147 4 "C1'" A DC 11 ? ? "O4'" A DC 11 ? ? "C4'" A DC 11 ? ? 101.56 110.10 -8.54 1.00 N 148 4 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? N1 A DC 11 ? ? 114.39 108.30 6.09 0.30 N 149 4 "C4'" B DG 13 ? ? "C3'" B DG 13 ? ? "C2'" B DG 13 ? ? 95.13 102.20 -7.07 0.70 N 150 4 "C4'" B DT 14 ? ? "C3'" B DT 14 ? ? "C2'" B DT 14 ? ? 94.33 102.20 -7.87 0.70 N 151 4 "O4'" B DT 14 ? ? "C1'" B DT 14 ? ? "C2'" B DT 14 ? ? 99.44 105.90 -6.46 0.80 N 152 4 "C4'" B DG 16 ? ? "C3'" B DG 16 ? ? "C2'" B DG 16 ? ? 97.95 102.20 -4.25 0.70 N 153 4 "O4'" B DG 16 ? ? "C1'" B DG 16 ? ? "C2'" B DG 16 ? ? 98.20 105.90 -7.70 0.80 N 154 4 "C4'" B DC 17 ? ? "C3'" B DC 17 ? ? "C2'" B DC 17 ? ? 97.02 102.20 -5.18 0.70 N 155 4 "C3'" B DC 17 ? ? "C2'" B DC 17 ? ? "C1'" B DC 17 ? ? 96.92 102.40 -5.48 0.80 N 156 4 "O4'" B DC 17 ? ? "C1'" B DC 17 ? ? N1 B DC 17 ? ? 110.45 108.30 2.15 0.30 N 157 4 C6 B DC 17 ? ? N1 B DC 17 ? ? C2 B DC 17 ? ? 123.12 120.30 2.82 0.40 N 158 4 "C4'" B DG 18 ? ? "C3'" B DG 18 ? ? "C2'" B DG 18 ? ? 97.06 102.20 -5.14 0.70 N 159 4 "O4'" B DG 18 ? ? "C1'" B DG 18 ? ? "C2'" B DG 18 ? ? 98.90 105.90 -7.00 0.80 N 160 4 "O4'" B DG 18 ? ? "C1'" B DG 18 ? ? N9 B DG 18 ? ? 112.61 108.30 4.31 0.30 N 161 4 "C4'" B DA 19 ? ? "C3'" B DA 19 ? ? "C2'" B DA 19 ? ? 97.32 102.20 -4.88 0.70 N 162 4 "O4'" B DT 20 ? ? "C4'" B DT 20 ? ? "C3'" B DT 20 ? ? 115.63 106.00 9.63 0.60 N 163 4 "C5'" B DT 20 ? ? "C4'" B DT 20 ? ? "C3'" B DT 20 ? ? 124.81 115.70 9.11 1.20 N 164 4 "C4'" B DT 20 ? ? "C3'" B DT 20 ? ? "C2'" B DT 20 ? ? 89.44 102.20 -12.76 0.70 N 165 4 "O4'" B DT 20 ? ? "C1'" B DT 20 ? ? "C2'" B DT 20 ? ? 98.54 105.90 -7.36 0.80 N 166 4 N1 B DT 20 ? ? "C1'" B DT 20 ? ? "C2'" B DT 20 ? ? 122.70 114.30 8.40 1.40 N 167 4 "O4'" B DT 20 ? ? "C1'" B DT 20 ? ? N1 B DT 20 ? ? 100.29 108.00 -7.71 0.70 N 168 4 C4 B DT 20 ? ? C5 B DT 20 ? ? C7 B DT 20 ? ? 124.44 119.00 5.44 0.60 N 169 4 C6 B DT 20 ? ? C5 B DT 20 ? ? C7 B DT 20 ? ? 116.84 122.90 -6.06 0.60 N 170 4 "O4'" B DG 21 ? ? "C1'" B DG 21 ? ? N9 B DG 21 ? ? 103.28 108.00 -4.72 0.70 N 171 4 "C3'" B DG 21 ? ? "O3'" B DG 21 ? ? P B DG 22 ? ? 129.88 119.70 10.18 1.20 Y 172 5 "O4'" A DC 1 ? ? "C4'" A DC 1 ? ? "C3'" A DC 1 ? ? 101.78 104.50 -2.72 0.40 N 173 5 "C1'" A DC 1 ? ? "O4'" A DC 1 ? ? "C4'" A DC 1 ? ? 100.77 110.10 -9.33 1.00 N 174 5 "C3'" A DC 1 ? ? "O3'" A DC 1 ? ? P A DC 2 ? ? 126.99 119.70 7.29 1.20 Y 175 5 C6 A DA 3 ? ? N1 A DA 3 ? ? C2 A DA 3 ? ? 122.24 118.60 3.64 0.60 N 176 5 "C5'" A DT 4 ? ? "C4'" A DT 4 ? ? "C3'" A DT 4 ? ? 126.32 115.70 10.62 1.20 N 177 5 "C4'" A DT 4 ? ? "C3'" A DT 4 ? ? "C2'" A DT 4 ? ? 95.07 102.20 -7.13 0.70 N 178 5 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? "C2'" A DT 4 ? ? 96.30 105.90 -9.60 0.80 N 179 5 "C4'" A DG 6 ? ? "C3'" A DG 6 ? ? "C2'" A DG 6 ? ? 96.63 102.20 -5.57 0.70 N 180 5 N1 A DC 7 ? ? C2 A DC 7 ? ? O2 A DC 7 ? ? 122.79 118.90 3.89 0.60 N 181 5 "O4'" A DA 9 ? ? "C4'" A DA 9 ? ? "C3'" A DA 9 ? ? 109.67 106.00 3.67 0.60 N 182 5 "C4'" A DA 9 ? ? "C3'" A DA 9 ? ? "C2'" A DA 9 ? ? 95.04 102.20 -7.16 0.70 N 183 5 "O4'" A DA 9 ? ? "C1'" A DA 9 ? ? "C2'" A DA 9 ? ? 100.50 105.90 -5.40 0.80 N 184 5 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? "C2'" A DC 10 ? ? 100.66 105.90 -5.24 0.80 N 185 5 N1 A DC 10 ? ? "C1'" A DC 10 ? ? "C2'" A DC 10 ? ? 125.82 114.30 11.52 1.40 N 186 5 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 100.07 108.00 -7.93 0.70 N 187 5 "O4'" A DC 11 ? ? "C4'" A DC 11 ? ? "C3'" A DC 11 ? ? 101.77 104.50 -2.73 0.40 N 188 5 "C1'" A DC 11 ? ? "O4'" A DC 11 ? ? "C4'" A DC 11 ? ? 102.31 110.10 -7.79 1.00 N 189 5 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? N1 A DC 11 ? ? 113.07 108.30 4.77 0.30 N 190 5 "C4'" B DG 13 ? ? "C3'" B DG 13 ? ? "C2'" B DG 13 ? ? 95.19 102.20 -7.01 0.70 N 191 5 "C4'" B DT 14 ? ? "C3'" B DT 14 ? ? "C2'" B DT 14 ? ? 95.26 102.20 -6.94 0.70 N 192 5 "O4'" B DT 14 ? ? "C1'" B DT 14 ? ? N1 B DT 14 ? ? 111.36 108.30 3.06 0.30 N 193 5 "O4'" B DA 15 ? ? "C1'" B DA 15 ? ? "C2'" B DA 15 ? ? 97.95 105.90 -7.95 0.80 N 194 5 "C4'" B DG 16 ? ? "C3'" B DG 16 ? ? "C2'" B DG 16 ? ? 97.10 102.20 -5.10 0.70 N 195 5 "O4'" B DG 16 ? ? "C1'" B DG 16 ? ? "C2'" B DG 16 ? ? 98.35 105.90 -7.55 0.80 N 196 5 "C3'" B DC 17 ? ? "C2'" B DC 17 ? ? "C1'" B DC 17 ? ? 95.22 102.40 -7.18 0.80 N 197 5 C6 B DC 17 ? ? N1 B DC 17 ? ? C2 B DC 17 ? ? 124.61 120.30 4.31 0.40 N 198 5 "C4'" B DG 18 ? ? "C3'" B DG 18 ? ? "C2'" B DG 18 ? ? 97.23 102.20 -4.97 0.70 N 199 5 "O4'" B DG 18 ? ? "C1'" B DG 18 ? ? N9 B DG 18 ? ? 110.16 108.30 1.86 0.30 N 200 5 "O4'" B DT 20 ? ? "C4'" B DT 20 ? ? "C3'" B DT 20 ? ? 111.24 106.00 5.24 0.60 N 201 5 "C5'" B DT 20 ? ? "C4'" B DT 20 ? ? "C3'" B DT 20 ? ? 126.73 115.70 11.03 1.20 N 202 5 "C4'" B DT 20 ? ? "C3'" B DT 20 ? ? "C2'" B DT 20 ? ? 89.82 102.20 -12.38 0.70 N 203 5 "O4'" B DT 20 ? ? "C1'" B DT 20 ? ? "C2'" B DT 20 ? ? 97.42 105.90 -8.48 0.80 N 204 5 N1 B DT 20 ? ? "C1'" B DT 20 ? ? "C2'" B DT 20 ? ? 123.72 114.30 9.42 1.40 N 205 5 "O4'" B DT 20 ? ? "C1'" B DT 20 ? ? N1 B DT 20 ? ? 100.37 108.00 -7.63 0.70 N 206 5 C4 B DT 20 ? ? C5 B DT 20 ? ? C7 B DT 20 ? ? 123.44 119.00 4.44 0.60 N 207 5 C6 B DT 20 ? ? C5 B DT 20 ? ? C7 B DT 20 ? ? 117.38 122.90 -5.52 0.60 N 208 5 "C5'" B DG 21 ? ? "C4'" B DG 21 ? ? "O4'" B DG 21 ? ? 118.48 109.80 8.68 1.10 N 209 5 "O4'" B DG 21 ? ? "C1'" B DG 21 ? ? "C2'" B DG 21 ? ? 97.20 105.90 -8.70 0.80 N 210 5 "C4'" B DG 22 ? ? "C3'" B DG 22 ? ? "C2'" B DG 22 ? ? 97.96 102.20 -4.24 0.70 N 211 6 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? "C2'" A DC 1 ? ? 98.81 105.90 -7.09 0.80 N 212 6 N1 A DC 1 ? ? C2 A DC 1 ? ? O2 A DC 1 ? ? 123.13 118.90 4.23 0.60 N 213 6 "C3'" A DC 1 ? ? "O3'" A DC 1 ? ? P A DC 2 ? ? 128.58 119.70 8.88 1.20 Y 214 6 "C4'" A DC 2 ? ? "C3'" A DC 2 ? ? "C2'" A DC 2 ? ? 97.61 102.20 -4.59 0.70 N 215 6 C6 A DA 3 ? ? N1 A DA 3 ? ? C2 A DA 3 ? ? 122.88 118.60 4.28 0.60 N 216 6 "C5'" A DT 4 ? ? "C4'" A DT 4 ? ? "C3'" A DT 4 ? ? 127.26 115.70 11.56 1.20 N 217 6 "C4'" A DT 4 ? ? "C3'" A DT 4 ? ? "C2'" A DT 4 ? ? 94.03 102.20 -8.17 0.70 N 218 6 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? "C2'" A DT 4 ? ? 95.76 105.90 -10.14 0.80 N 219 6 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 110.84 108.30 2.54 0.30 N 220 6 "C4'" A DG 6 ? ? "C3'" A DG 6 ? ? "C2'" A DG 6 ? ? 97.15 102.20 -5.05 0.70 N 221 6 "C4'" A DC 7 ? ? "C3'" A DC 7 ? ? "C2'" A DC 7 ? ? 97.76 102.20 -4.44 0.70 N 222 6 "O4'" A DC 7 ? ? "C1'" A DC 7 ? ? N1 A DC 7 ? ? 111.64 108.30 3.34 0.30 N 223 6 "C3'" A DT 8 ? ? "C2'" A DT 8 ? ? "C1'" A DT 8 ? ? 97.48 102.40 -4.92 0.80 N 224 6 "O4'" A DA 9 ? ? "C4'" A DA 9 ? ? "C3'" A DA 9 ? ? 109.66 106.00 3.66 0.60 N 225 6 "C4'" A DA 9 ? ? "C3'" A DA 9 ? ? "C2'" A DA 9 ? ? 94.27 102.20 -7.93 0.70 N 226 6 "O4'" A DA 9 ? ? "C1'" A DA 9 ? ? "C2'" A DA 9 ? ? 100.23 105.90 -5.67 0.80 N 227 6 "O4'" A DA 9 ? ? "C1'" A DA 9 ? ? N9 A DA 9 ? ? 102.03 108.00 -5.97 0.70 N 228 6 "C4'" A DC 10 ? ? "C3'" A DC 10 ? ? "C2'" A DC 10 ? ? 97.93 102.20 -4.27 0.70 N 229 6 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? "C2'" A DC 10 ? ? 99.77 105.90 -6.13 0.80 N 230 6 N1 A DC 10 ? ? "C1'" A DC 10 ? ? "C2'" A DC 10 ? ? 122.99 114.30 8.69 1.40 N 231 6 "C1'" A DC 11 ? ? "O4'" A DC 11 ? ? "C4'" A DC 11 ? ? 102.19 110.10 -7.91 1.00 N 232 6 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? "C2'" A DC 11 ? ? 100.27 105.90 -5.63 0.80 N 233 6 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? N1 A DC 11 ? ? 112.41 108.30 4.11 0.30 N 234 6 "C4'" B DG 12 ? ? "C3'" B DG 12 ? ? "C2'" B DG 12 ? ? 97.79 102.20 -4.41 0.70 N 235 6 "C4'" B DG 13 ? ? "C3'" B DG 13 ? ? "C2'" B DG 13 ? ? 96.32 102.20 -5.88 0.70 N 236 6 "O4'" B DG 13 ? ? "C1'" B DG 13 ? ? "C2'" B DG 13 ? ? 101.01 105.90 -4.89 0.80 N 237 6 "C4'" B DT 14 ? ? "C3'" B DT 14 ? ? "C2'" B DT 14 ? ? 95.24 102.20 -6.96 0.70 N 238 6 "O4'" B DT 14 ? ? "C1'" B DT 14 ? ? "C2'" B DT 14 ? ? 100.18 105.90 -5.72 0.80 N 239 6 "O4'" B DT 14 ? ? "C1'" B DT 14 ? ? N1 B DT 14 ? ? 114.67 108.30 6.37 0.30 N 240 6 "O4'" B DA 15 ? ? "C1'" B DA 15 ? ? N9 B DA 15 ? ? 102.26 108.00 -5.74 0.70 N 241 6 "C4'" B DG 16 ? ? "C3'" B DG 16 ? ? "C2'" B DG 16 ? ? 97.06 102.20 -5.14 0.70 N 242 6 "C3'" B DG 16 ? ? "C2'" B DG 16 ? ? "C1'" B DG 16 ? ? 94.99 102.40 -7.41 0.80 N 243 6 "O4'" B DG 16 ? ? "C1'" B DG 16 ? ? "C2'" B DG 16 ? ? 100.07 105.90 -5.83 0.80 N 244 6 "C4'" B DC 17 ? ? "C3'" B DC 17 ? ? "C2'" B DC 17 ? ? 97.55 102.20 -4.65 0.70 N 245 6 "C4'" B DG 18 ? ? "C3'" B DG 18 ? ? "C2'" B DG 18 ? ? 96.62 102.20 -5.58 0.70 N 246 6 "O4'" B DG 18 ? ? "C1'" B DG 18 ? ? N9 B DG 18 ? ? 110.10 108.30 1.80 0.30 N 247 6 "O4'" B DT 20 ? ? "C4'" B DT 20 ? ? "C3'" B DT 20 ? ? 111.40 106.00 5.40 0.60 N 248 6 "C5'" B DT 20 ? ? "C4'" B DT 20 ? ? "C3'" B DT 20 ? ? 125.78 115.70 10.08 1.20 N 249 6 "C4'" B DT 20 ? ? "C3'" B DT 20 ? ? "C2'" B DT 20 ? ? 90.32 102.20 -11.88 0.70 N 250 6 "O4'" B DT 20 ? ? "C1'" B DT 20 ? ? "C2'" B DT 20 ? ? 98.12 105.90 -7.78 0.80 N 251 6 N1 B DT 20 ? ? "C1'" B DT 20 ? ? "C2'" B DT 20 ? ? 124.21 114.30 9.91 1.40 N 252 6 "O4'" B DT 20 ? ? "C1'" B DT 20 ? ? N1 B DT 20 ? ? 100.26 108.00 -7.74 0.70 N 253 6 C4 B DT 20 ? ? C5 B DT 20 ? ? C7 B DT 20 ? ? 124.05 119.00 5.05 0.60 N 254 6 C6 B DT 20 ? ? C5 B DT 20 ? ? C7 B DT 20 ? ? 117.73 122.90 -5.17 0.60 N 255 6 "C5'" B DG 21 ? ? "C4'" B DG 21 ? ? "O4'" B DG 21 ? ? 119.61 109.80 9.81 1.10 N 256 6 "O4'" B DG 21 ? ? "C1'" B DG 21 ? ? "C2'" B DG 21 ? ? 99.06 105.90 -6.84 0.80 N 257 7 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? "C2'" A DC 1 ? ? 97.08 105.90 -8.82 0.80 N 258 7 N1 A DC 1 ? ? C2 A DC 1 ? ? O2 A DC 1 ? ? 122.88 118.90 3.98 0.60 N 259 7 "C3'" A DC 1 ? ? "O3'" A DC 1 ? ? P A DC 2 ? ? 128.26 119.70 8.56 1.20 Y 260 7 N1 A DC 2 ? ? C2 A DC 2 ? ? O2 A DC 2 ? ? 122.74 118.90 3.84 0.60 N 261 7 "O4'" A DA 3 ? ? "C1'" A DA 3 ? ? "C2'" A DA 3 ? ? 100.91 105.90 -4.99 0.80 N 262 7 C6 A DA 3 ? ? N1 A DA 3 ? ? C2 A DA 3 ? ? 123.23 118.60 4.63 0.60 N 263 7 "O4'" A DT 4 ? ? "C4'" A DT 4 ? ? "C3'" A DT 4 ? ? 110.79 106.00 4.79 0.60 N 264 7 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? "C2'" A DT 4 ? ? 98.64 105.90 -7.26 0.80 N 265 7 "C4'" A DG 6 ? ? "C3'" A DG 6 ? ? "C2'" A DG 6 ? ? 97.52 102.20 -4.68 0.70 N 266 7 "C4'" A DC 7 ? ? "C3'" A DC 7 ? ? "C2'" A DC 7 ? ? 97.60 102.20 -4.60 0.70 N 267 7 "O4'" A DC 7 ? ? "C1'" A DC 7 ? ? N1 A DC 7 ? ? 111.71 108.30 3.41 0.30 N 268 7 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 103.05 108.00 -4.95 0.70 N 269 7 "O4'" A DA 9 ? ? "C4'" A DA 9 ? ? "C3'" A DA 9 ? ? 109.69 106.00 3.69 0.60 N 270 7 "C4'" A DA 9 ? ? "C3'" A DA 9 ? ? "C2'" A DA 9 ? ? 96.21 102.20 -5.99 0.70 N 271 7 "O4'" A DA 9 ? ? "C1'" A DA 9 ? ? "C2'" A DA 9 ? ? 99.38 105.90 -6.52 0.80 N 272 7 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? "C2'" A DC 10 ? ? 99.57 105.90 -6.33 0.80 N 273 7 N1 A DC 10 ? ? "C1'" A DC 10 ? ? "C2'" A DC 10 ? ? 123.33 114.30 9.03 1.40 N 274 7 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 101.21 108.00 -6.79 0.70 N 275 7 "C1'" A DC 11 ? ? "O4'" A DC 11 ? ? "C4'" A DC 11 ? ? 103.10 110.10 -7.00 1.00 N 276 7 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? "C2'" A DC 11 ? ? 99.77 105.90 -6.13 0.80 N 277 7 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? N1 A DC 11 ? ? 111.99 108.30 3.69 0.30 N 278 7 "C4'" B DG 13 ? ? "C3'" B DG 13 ? ? "C2'" B DG 13 ? ? 96.02 102.20 -6.18 0.70 N 279 7 "C4'" B DT 14 ? ? "C3'" B DT 14 ? ? "C2'" B DT 14 ? ? 94.62 102.20 -7.58 0.70 N 280 7 "O4'" B DT 14 ? ? "C1'" B DT 14 ? ? N1 B DT 14 ? ? 112.40 108.30 4.10 0.30 N 281 7 "O4'" B DA 15 ? ? "C1'" B DA 15 ? ? "C2'" B DA 15 ? ? 100.97 105.90 -4.93 0.80 N 282 7 "C4'" B DG 16 ? ? "C3'" B DG 16 ? ? "C2'" B DG 16 ? ? 96.35 102.20 -5.85 0.70 N 283 7 "C3'" B DG 16 ? ? "C2'" B DG 16 ? ? "C1'" B DG 16 ? ? 97.31 102.40 -5.09 0.80 N 284 7 "O4'" B DG 16 ? ? "C1'" B DG 16 ? ? "C2'" B DG 16 ? ? 98.72 105.90 -7.18 0.80 N 285 7 "C3'" B DC 17 ? ? "C2'" B DC 17 ? ? "C1'" B DC 17 ? ? 95.68 102.40 -6.72 0.80 N 286 7 C6 B DC 17 ? ? N1 B DC 17 ? ? C2 B DC 17 ? ? 124.27 120.30 3.97 0.40 N 287 7 "C4'" B DG 18 ? ? "C3'" B DG 18 ? ? "C2'" B DG 18 ? ? 94.86 102.20 -7.34 0.70 N 288 7 "O4'" B DG 18 ? ? "C1'" B DG 18 ? ? "C2'" B DG 18 ? ? 100.68 105.90 -5.22 0.80 N 289 7 "O4'" B DG 18 ? ? "C1'" B DG 18 ? ? N9 B DG 18 ? ? 111.08 108.30 2.78 0.30 N 290 7 "O4'" B DT 20 ? ? "C4'" B DT 20 ? ? "C3'" B DT 20 ? ? 111.74 106.00 5.74 0.60 N 291 7 "C5'" B DT 20 ? ? "C4'" B DT 20 ? ? "C3'" B DT 20 ? ? 125.17 115.70 9.47 1.20 N 292 7 "C4'" B DT 20 ? ? "C3'" B DT 20 ? ? "C2'" B DT 20 ? ? 90.48 102.20 -11.72 0.70 N 293 7 "O4'" B DT 20 ? ? "C1'" B DT 20 ? ? "C2'" B DT 20 ? ? 98.27 105.90 -7.63 0.80 N 294 7 "O4'" B DT 20 ? ? "C1'" B DT 20 ? ? N1 B DT 20 ? ? 101.60 108.00 -6.40 0.70 N 295 7 C4 B DT 20 ? ? C5 B DT 20 ? ? C7 B DT 20 ? ? 123.69 119.00 4.69 0.60 N 296 7 C6 B DT 20 ? ? C5 B DT 20 ? ? C7 B DT 20 ? ? 117.31 122.90 -5.59 0.60 N 297 7 "C5'" B DG 21 ? ? "C4'" B DG 21 ? ? "O4'" B DG 21 ? ? 117.37 109.80 7.57 1.10 N 298 7 "C3'" B DG 21 ? ? "C2'" B DG 21 ? ? "C1'" B DG 21 ? ? 97.47 102.40 -4.93 0.80 N 299 7 "C3'" B DG 21 ? ? "O3'" B DG 21 ? ? P B DG 22 ? ? 127.13 119.70 7.43 1.20 Y 300 8 "C1'" A DC 1 ? ? "O4'" A DC 1 ? ? "C4'" A DC 1 ? ? 102.67 110.10 -7.43 1.00 N 301 8 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? "C2'" A DC 1 ? ? 100.94 105.90 -4.96 0.80 N 302 8 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 100.89 108.00 -7.11 0.70 N 303 8 C2 A DC 1 ? ? N3 A DC 1 ? ? C4 A DC 1 ? ? 122.91 119.90 3.01 0.50 N 304 8 N1 A DC 1 ? ? C2 A DC 1 ? ? O2 A DC 1 ? ? 122.83 118.90 3.93 0.60 N 305 8 "C3'" A DC 1 ? ? "O3'" A DC 1 ? ? P A DC 2 ? ? 128.04 119.70 8.34 1.20 Y 306 8 "O4'" A DC 2 ? ? "C1'" A DC 2 ? ? N1 A DC 2 ? ? 103.25 108.00 -4.75 0.70 N 307 8 N1 A DC 2 ? ? C2 A DC 2 ? ? O2 A DC 2 ? ? 123.04 118.90 4.14 0.60 N 308 8 "C5'" A DT 4 ? ? "C4'" A DT 4 ? ? "C3'" A DT 4 ? ? 127.22 115.70 11.52 1.20 N 309 8 "C4'" A DT 4 ? ? "C3'" A DT 4 ? ? "C2'" A DT 4 ? ? 93.10 102.20 -9.10 0.70 N 310 8 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? "C2'" A DT 4 ? ? 95.93 105.90 -9.97 0.80 N 311 8 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 110.74 108.30 2.44 0.30 N 312 8 "C3'" A DT 4 ? ? "O3'" A DT 4 ? ? P A 5CM 5 ? ? 127.46 119.70 7.76 1.20 Y 313 8 "C4'" A DG 6 ? ? "C3'" A DG 6 ? ? "C2'" A DG 6 ? ? 97.59 102.20 -4.61 0.70 N 314 8 "C4'" A DC 7 ? ? "C3'" A DC 7 ? ? "C2'" A DC 7 ? ? 97.23 102.20 -4.97 0.70 N 315 8 "O4'" A DC 7 ? ? "C1'" A DC 7 ? ? N1 A DC 7 ? ? 111.49 108.30 3.19 0.30 N 316 8 "C4'" A DA 9 ? ? "C3'" A DA 9 ? ? "C2'" A DA 9 ? ? 94.54 102.20 -7.66 0.70 N 317 8 "O4'" A DA 9 ? ? "C1'" A DA 9 ? ? "C2'" A DA 9 ? ? 101.02 105.90 -4.88 0.80 N 318 8 "O4'" A DA 9 ? ? "C1'" A DA 9 ? ? N9 A DA 9 ? ? 101.67 108.00 -6.33 0.70 N 319 8 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? "C2'" A DC 10 ? ? 98.90 105.90 -7.00 0.80 N 320 8 N1 A DC 10 ? ? "C1'" A DC 10 ? ? "C2'" A DC 10 ? ? 124.03 114.30 9.73 1.40 N 321 8 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 101.75 108.00 -6.25 0.70 N 322 8 "C3'" A DC 10 ? ? "O3'" A DC 10 ? ? P A DC 11 ? ? 130.35 119.70 10.65 1.20 Y 323 8 "O3'" A DC 10 ? ? P A DC 11 ? ? "O5'" A DC 11 ? ? 91.77 104.00 -12.23 1.90 Y 324 8 P A DC 11 ? ? "O5'" A DC 11 ? ? "C5'" A DC 11 ? ? 136.87 120.90 15.97 1.60 N 325 8 "C1'" A DC 11 ? ? "O4'" A DC 11 ? ? "C4'" A DC 11 ? ? 99.99 110.10 -10.11 1.00 N 326 8 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? N1 A DC 11 ? ? 111.87 108.30 3.57 0.30 N 327 8 C2 A DC 11 ? ? N3 A DC 11 ? ? C4 A DC 11 ? ? 122.96 119.90 3.06 0.50 N 328 8 "O4'" B DG 12 ? ? "C1'" B DG 12 ? ? N9 B DG 12 ? ? 103.25 108.00 -4.75 0.70 N 329 8 "C4'" B DG 13 ? ? "C3'" B DG 13 ? ? "C2'" B DG 13 ? ? 95.60 102.20 -6.60 0.70 N 330 8 "C4'" B DT 14 ? ? "C3'" B DT 14 ? ? "C2'" B DT 14 ? ? 95.71 102.20 -6.49 0.70 N 331 8 "O4'" B DT 14 ? ? "C1'" B DT 14 ? ? N1 B DT 14 ? ? 112.84 108.30 4.54 0.30 N 332 8 "O4'" B DA 15 ? ? "C1'" B DA 15 ? ? N9 B DA 15 ? ? 102.55 108.00 -5.45 0.70 N 333 8 "C4'" B DG 16 ? ? "C3'" B DG 16 ? ? "C2'" B DG 16 ? ? 97.23 102.20 -4.97 0.70 N 334 8 "C3'" B DG 16 ? ? "C2'" B DG 16 ? ? "C1'" B DG 16 ? ? 95.75 102.40 -6.65 0.80 N 335 8 "O4'" B DG 16 ? ? "C1'" B DG 16 ? ? "C2'" B DG 16 ? ? 98.72 105.90 -7.18 0.80 N 336 8 "O4'" B DG 16 ? ? "C1'" B DG 16 ? ? N9 B DG 16 ? ? 110.79 108.30 2.49 0.30 N 337 8 "C4'" B DG 18 ? ? "C3'" B DG 18 ? ? "C2'" B DG 18 ? ? 96.83 102.20 -5.37 0.70 N 338 8 "O4'" B DG 18 ? ? "C1'" B DG 18 ? ? N9 B DG 18 ? ? 110.54 108.30 2.24 0.30 N 339 8 "C4'" B DA 19 ? ? "C3'" B DA 19 ? ? "C2'" B DA 19 ? ? 97.28 102.20 -4.92 0.70 N 340 8 "O4'" B DT 20 ? ? "C4'" B DT 20 ? ? "C3'" B DT 20 ? ? 111.92 106.00 5.92 0.60 N 341 8 "C5'" B DT 20 ? ? "C4'" B DT 20 ? ? "C3'" B DT 20 ? ? 124.83 115.70 9.13 1.20 N 342 8 "C4'" B DT 20 ? ? "C3'" B DT 20 ? ? "C2'" B DT 20 ? ? 90.66 102.20 -11.54 0.70 N 343 8 "O4'" B DT 20 ? ? "C1'" B DT 20 ? ? "C2'" B DT 20 ? ? 96.94 105.90 -8.96 0.80 N 344 8 N1 B DT 20 ? ? "C1'" B DT 20 ? ? "C2'" B DT 20 ? ? 124.65 114.30 10.35 1.40 N 345 8 "O4'" B DT 20 ? ? "C1'" B DT 20 ? ? N1 B DT 20 ? ? 100.51 108.00 -7.49 0.70 N 346 8 C4 B DT 20 ? ? C5 B DT 20 ? ? C7 B DT 20 ? ? 123.62 119.00 4.62 0.60 N 347 8 C6 B DT 20 ? ? C5 B DT 20 ? ? C7 B DT 20 ? ? 117.86 122.90 -5.04 0.60 N 348 8 "C4'" B DG 21 ? ? "C3'" B DG 21 ? ? "C2'" B DG 21 ? ? 97.86 102.20 -4.34 0.70 N 349 8 "C3'" B DG 21 ? ? "C2'" B DG 21 ? ? "C1'" B DG 21 ? ? 95.87 102.40 -6.53 0.80 N 350 9 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? "C2'" A DC 1 ? ? 98.56 105.90 -7.34 0.80 N 351 9 N1 A DC 1 ? ? C2 A DC 1 ? ? O2 A DC 1 ? ? 123.62 118.90 4.72 0.60 N 352 9 "C3'" A DC 1 ? ? "O3'" A DC 1 ? ? P A DC 2 ? ? 129.12 119.70 9.42 1.20 Y 353 9 N1 A DC 2 ? ? C2 A DC 2 ? ? O2 A DC 2 ? ? 123.08 118.90 4.18 0.60 N 354 9 "O4'" A DA 3 ? ? "C1'" A DA 3 ? ? "C2'" A DA 3 ? ? 100.30 105.90 -5.60 0.80 N 355 9 C6 A DA 3 ? ? N1 A DA 3 ? ? C2 A DA 3 ? ? 123.23 118.60 4.63 0.60 N 356 9 "O4'" A DT 4 ? ? "C4'" A DT 4 ? ? "C3'" A DT 4 ? ? 109.63 106.00 3.63 0.60 N 357 9 "C5'" A DT 4 ? ? "C4'" A DT 4 ? ? "C3'" A DT 4 ? ? 126.75 115.70 11.05 1.20 N 358 9 "C4'" A DT 4 ? ? "C3'" A DT 4 ? ? "C2'" A DT 4 ? ? 94.67 102.20 -7.53 0.70 N 359 9 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? "C2'" A DT 4 ? ? 97.43 105.90 -8.47 0.80 N 360 9 "C3'" A DT 4 ? ? "O3'" A DT 4 ? ? P A 5CM 5 ? ? 127.43 119.70 7.73 1.20 Y 361 9 "C4'" A DG 6 ? ? "C3'" A DG 6 ? ? "C2'" A DG 6 ? ? 97.57 102.20 -4.63 0.70 N 362 9 "C4'" A DC 7 ? ? "C3'" A DC 7 ? ? "C2'" A DC 7 ? ? 97.66 102.20 -4.54 0.70 N 363 9 "O4'" A DC 7 ? ? "C1'" A DC 7 ? ? N1 A DC 7 ? ? 110.29 108.30 1.99 0.30 N 364 9 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? "C2'" A DT 8 ? ? 101.09 105.90 -4.81 0.80 N 365 9 "O4'" A DA 9 ? ? "C4'" A DA 9 ? ? "C3'" A DA 9 ? ? 110.15 106.00 4.15 0.60 N 366 9 "C4'" A DA 9 ? ? "C3'" A DA 9 ? ? "C2'" A DA 9 ? ? 94.67 102.20 -7.53 0.70 N 367 9 "O4'" A DA 9 ? ? "C1'" A DA 9 ? ? "C2'" A DA 9 ? ? 100.61 105.90 -5.29 0.80 N 368 9 "O4'" A DA 9 ? ? "C1'" A DA 9 ? ? N9 A DA 9 ? ? 103.71 108.00 -4.29 0.70 N 369 9 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? "C2'" A DC 10 ? ? 99.54 105.90 -6.36 0.80 N 370 9 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 102.82 108.00 -5.18 0.70 N 371 9 "C1'" A DC 11 ? ? "O4'" A DC 11 ? ? "C4'" A DC 11 ? ? 102.02 110.10 -8.08 1.00 N 372 9 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? "C2'" A DC 11 ? ? 100.68 105.90 -5.22 0.80 N 373 9 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? N1 A DC 11 ? ? 112.88 108.30 4.58 0.30 N 374 9 "O4'" B DG 12 ? ? "C1'" B DG 12 ? ? "C2'" B DG 12 ? ? 100.91 105.90 -4.99 0.80 N 375 9 "C4'" B DG 13 ? ? "C3'" B DG 13 ? ? "C2'" B DG 13 ? ? 96.48 102.20 -5.72 0.70 N 376 9 "C4'" B DT 14 ? ? "C3'" B DT 14 ? ? "C2'" B DT 14 ? ? 95.06 102.20 -7.14 0.70 N 377 9 "O4'" B DT 14 ? ? "C1'" B DT 14 ? ? N1 B DT 14 ? ? 113.60 108.30 5.30 0.30 N 378 9 "O4'" B DA 15 ? ? "C4'" B DA 15 ? ? "C3'" B DA 15 ? ? 109.84 106.00 3.84 0.60 N 379 9 "O4'" B DA 15 ? ? "C1'" B DA 15 ? ? N9 B DA 15 ? ? 102.91 108.00 -5.09 0.70 N 380 9 "C4'" B DG 16 ? ? "C3'" B DG 16 ? ? "C2'" B DG 16 ? ? 97.59 102.20 -4.61 0.70 N 381 9 "C3'" B DG 16 ? ? "C2'" B DG 16 ? ? "C1'" B DG 16 ? ? 96.30 102.40 -6.10 0.80 N 382 9 "O4'" B DG 16 ? ? "C1'" B DG 16 ? ? "C2'" B DG 16 ? ? 98.63 105.90 -7.27 0.80 N 383 9 "O4'" B DG 16 ? ? "C1'" B DG 16 ? ? N9 B DG 16 ? ? 111.29 108.30 2.99 0.30 N 384 9 "C4'" B DC 17 ? ? "C3'" B DC 17 ? ? "C2'" B DC 17 ? ? 97.07 102.20 -5.13 0.70 N 385 9 "C4'" B DG 18 ? ? "C3'" B DG 18 ? ? "C2'" B DG 18 ? ? 94.89 102.20 -7.31 0.70 N 386 9 "O4'" B DG 18 ? ? "C1'" B DG 18 ? ? "C2'" B DG 18 ? ? 100.98 105.90 -4.92 0.80 N 387 9 "O4'" B DG 18 ? ? "C1'" B DG 18 ? ? N9 B DG 18 ? ? 111.81 108.30 3.51 0.30 N 388 9 "C4'" B DA 19 ? ? "C3'" B DA 19 ? ? "C2'" B DA 19 ? ? 97.79 102.20 -4.41 0.70 N 389 9 "O4'" B DA 19 ? ? "C1'" B DA 19 ? ? N9 B DA 19 ? ? 103.34 108.00 -4.66 0.70 N 390 9 "O4'" B DT 20 ? ? "C4'" B DT 20 ? ? "C3'" B DT 20 ? ? 111.65 106.00 5.65 0.60 N 391 9 "C5'" B DT 20 ? ? "C4'" B DT 20 ? ? "C3'" B DT 20 ? ? 125.51 115.70 9.81 1.20 N 392 9 "C4'" B DT 20 ? ? "C3'" B DT 20 ? ? "C2'" B DT 20 ? ? 89.91 102.20 -12.29 0.70 N 393 9 "O4'" B DT 20 ? ? "C1'" B DT 20 ? ? "C2'" B DT 20 ? ? 96.75 105.90 -9.15 0.80 N 394 9 N1 B DT 20 ? ? "C1'" B DT 20 ? ? "C2'" B DT 20 ? ? 123.02 114.30 8.72 1.40 N 395 9 "O4'" B DT 20 ? ? "C1'" B DT 20 ? ? N1 B DT 20 ? ? 101.80 108.00 -6.20 0.70 N 396 9 C4 B DT 20 ? ? C5 B DT 20 ? ? C7 B DT 20 ? ? 125.16 119.00 6.16 0.60 N 397 9 C6 B DT 20 ? ? C5 B DT 20 ? ? C7 B DT 20 ? ? 116.96 122.90 -5.94 0.60 N 398 9 "C5'" B DG 21 ? ? "C4'" B DG 21 ? ? "O4'" B DG 21 ? ? 118.60 109.80 8.80 1.10 N 399 9 "O4'" B DG 21 ? ? "C1'" B DG 21 ? ? "C2'" B DG 21 ? ? 99.92 105.90 -5.98 0.80 N # loop_ _pdbx_validate_chiral.id _pdbx_validate_chiral.PDB_model_num _pdbx_validate_chiral.auth_atom_id _pdbx_validate_chiral.label_alt_id _pdbx_validate_chiral.auth_asym_id _pdbx_validate_chiral.auth_comp_id _pdbx_validate_chiral.auth_seq_id _pdbx_validate_chiral.PDB_ins_code _pdbx_validate_chiral.details _pdbx_validate_chiral.omega 1 1 "C1'" ? A BAP 23 ? 'WRONG HAND' . 2 1 "C2'" ? A BAP 23 ? 'WRONG HAND' . 3 1 "C3'" ? A BAP 23 ? 'WRONG HAND' . 4 2 "C1'" ? A BAP 23 ? 'WRONG HAND' . 5 2 "C2'" ? A BAP 23 ? 'WRONG HAND' . 6 2 "C3'" ? A BAP 23 ? 'WRONG HAND' . 7 3 "C1'" ? A BAP 23 ? 'WRONG HAND' . 8 3 "C2'" ? A BAP 23 ? 'WRONG HAND' . 9 3 "C3'" ? A BAP 23 ? 'WRONG HAND' . 10 4 "C1'" ? A BAP 23 ? 'WRONG HAND' . 11 4 "C2'" ? A BAP 23 ? 'WRONG HAND' . 12 4 "C3'" ? A BAP 23 ? 'WRONG HAND' . 13 5 "C1'" ? A BAP 23 ? 'WRONG HAND' . 14 5 "C2'" ? A BAP 23 ? 'WRONG HAND' . 15 5 "C3'" ? A BAP 23 ? 'WRONG HAND' . 16 6 "C1'" ? A BAP 23 ? 'WRONG HAND' . 17 6 "C2'" ? A BAP 23 ? 'WRONG HAND' . 18 6 "C3'" ? A BAP 23 ? 'WRONG HAND' . 19 7 "C1'" ? A BAP 23 ? 'WRONG HAND' . 20 7 "C2'" ? A BAP 23 ? 'WRONG HAND' . 21 7 "C3'" ? A BAP 23 ? 'WRONG HAND' . 22 8 "C1'" ? A BAP 23 ? 'WRONG HAND' . 23 8 "C2'" ? A BAP 23 ? 'WRONG HAND' . 24 8 "C3'" ? A BAP 23 ? 'WRONG HAND' . 25 9 "C1'" ? A BAP 23 ? 'WRONG HAND' . 26 9 "C2'" ? A BAP 23 ? 'WRONG HAND' . 27 9 "C3'" ? A BAP 23 ? 'WRONG HAND' . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id 5CM _pdbx_struct_mod_residue.label_seq_id 5 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id 5CM _pdbx_struct_mod_residue.auth_seq_id 5 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id DC _pdbx_struct_mod_residue.details ? # _pdbx_database_remark.id 999 _pdbx_database_remark.text ;SEQUENCE C10 atom of BP is covalently bonded to N2 atom of G6 in Chain A. ; # _pdbx_nmr_ensemble.entry_id 1Y9H _pdbx_nmr_ensemble.conformers_calculated_total_number 9 _pdbx_nmr_ensemble.conformers_submitted_total_number 9 _pdbx_nmr_ensemble.conformer_selection_criteria ;all calculated structures submitted,back calculated data agree with experimental NOESY spectrum,structures with acceptable covalent geometry,structures with favorable non-bond energy,structures with the least restraint violations,structures with the lowest energy,target function ; _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1Y9H _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'fewest violations,lowest energy' # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '11mer DNA duplex with MeC5 and [BP]G6 modified, H2O and D2O' _pdbx_nmr_sample_details.solvent_system 'H2O and D2O' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 273 _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 6.8 _pdbx_nmr_exptl_sample_conditions.ionic_strength '100 mM NaCl' _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type 1 1 1 '2D NOESY' 2 1 1 '2D TOCSY' 3 1 1 DQF-COSY # _pdbx_nmr_refine.entry_id 1Y9H _pdbx_nmr_refine.method ;simulated annealing molecular dynamics matrix relaxation ; _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_software.name X-PLOR _pdbx_nmr_software.version 3.1 _pdbx_nmr_software.classification refinement _pdbx_nmr_software.authors Brunger _pdbx_nmr_software.ordinal 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 5CM N1 N N N 1 5CM C2 C N N 2 5CM N3 N N N 3 5CM C4 C N N 4 5CM C5 C N N 5 5CM C5A C N N 6 5CM C6 C N N 7 5CM O2 O N N 8 5CM N4 N N N 9 5CM "C1'" C N R 10 5CM "C2'" C N N 11 5CM "C3'" C N S 12 5CM "C4'" C N R 13 5CM "O4'" O N N 14 5CM "O3'" O N N 15 5CM "C5'" C N N 16 5CM "O5'" O N N 17 5CM P P N N 18 5CM OP1 O N N 19 5CM OP2 O N N 20 5CM OP3 O N N 21 5CM H5A1 H N N 22 5CM H5A2 H N N 23 5CM H5A3 H N N 24 5CM H6 H N N 25 5CM HN41 H N N 26 5CM HN42 H N N 27 5CM "H1'" H N N 28 5CM "H2'" H N N 29 5CM "H2''" H N N 30 5CM "H3'" H N N 31 5CM "H4'" H N N 32 5CM "HO3'" H N N 33 5CM "H5'" H N N 34 5CM "H5''" H N N 35 5CM HOP2 H N N 36 5CM HOP3 H N N 37 BAP C1 C Y N 38 BAP C2 C Y N 39 BAP C3 C Y N 40 BAP C3A C Y N 41 BAP C4 C Y N 42 BAP C5 C Y N 43 BAP C5A C Y N 44 BAP C6 C Y N 45 BAP C7 C Y N 46 BAP C8 C Y N 47 BAP C8A C Y N 48 BAP C9 C Y N 49 BAP C10 C Y N 50 BAP C1A C Y N 51 BAP C3B C Y N 52 BAP C5B C Y N 53 BAP "C1'" C N R 54 BAP "O1'" O N N 55 BAP "C2'" C N R 56 BAP "O2'" O N N 57 BAP "C3'" C N R 58 BAP "O3'" O N N 59 BAP "C4'" C N N 60 BAP H1 H N N 61 BAP H2 H N N 62 BAP H3 H N N 63 BAP H4 H N N 64 BAP H5 H N N 65 BAP H8 H N N 66 BAP H9 H N N 67 BAP H10 H N N 68 BAP "H1'" H N N 69 BAP HO1 H N N 70 BAP "H2'" H N N 71 BAP HO2 H N N 72 BAP "H3'" H N N 73 BAP HO3 H N N 74 BAP "H4'1" H N N 75 BAP "H4'2" H N N 76 DA OP3 O N N 77 DA P P N N 78 DA OP1 O N N 79 DA OP2 O N N 80 DA "O5'" O N N 81 DA "C5'" C N N 82 DA "C4'" C N R 83 DA "O4'" O N N 84 DA "C3'" C N S 85 DA "O3'" O N N 86 DA "C2'" C N N 87 DA "C1'" C N R 88 DA N9 N Y N 89 DA C8 C Y N 90 DA N7 N Y N 91 DA C5 C Y N 92 DA C6 C Y N 93 DA N6 N N N 94 DA N1 N Y N 95 DA C2 C Y N 96 DA N3 N Y N 97 DA C4 C Y N 98 DA HOP3 H N N 99 DA HOP2 H N N 100 DA "H5'" H N N 101 DA "H5''" H N N 102 DA "H4'" H N N 103 DA "H3'" H N N 104 DA "HO3'" H N N 105 DA "H2'" H N N 106 DA "H2''" H N N 107 DA "H1'" H N N 108 DA H8 H N N 109 DA H61 H N N 110 DA H62 H N N 111 DA H2 H N N 112 DC OP3 O N N 113 DC P P N N 114 DC OP1 O N N 115 DC OP2 O N N 116 DC "O5'" O N N 117 DC "C5'" C N N 118 DC "C4'" C N R 119 DC "O4'" O N N 120 DC "C3'" C N S 121 DC "O3'" O N N 122 DC "C2'" C N N 123 DC "C1'" C N R 124 DC N1 N N N 125 DC C2 C N N 126 DC O2 O N N 127 DC N3 N N N 128 DC C4 C N N 129 DC N4 N N N 130 DC C5 C N N 131 DC C6 C N N 132 DC HOP3 H N N 133 DC HOP2 H N N 134 DC "H5'" H N N 135 DC "H5''" H N N 136 DC "H4'" H N N 137 DC "H3'" H N N 138 DC "HO3'" H N N 139 DC "H2'" H N N 140 DC "H2''" H N N 141 DC "H1'" H N N 142 DC H41 H N N 143 DC H42 H N N 144 DC H5 H N N 145 DC H6 H N N 146 DG OP3 O N N 147 DG P P N N 148 DG OP1 O N N 149 DG OP2 O N N 150 DG "O5'" O N N 151 DG "C5'" C N N 152 DG "C4'" C N R 153 DG "O4'" O N N 154 DG "C3'" C N S 155 DG "O3'" O N N 156 DG "C2'" C N N 157 DG "C1'" C N R 158 DG N9 N Y N 159 DG C8 C Y N 160 DG N7 N Y N 161 DG C5 C Y N 162 DG C6 C N N 163 DG O6 O N N 164 DG N1 N N N 165 DG C2 C N N 166 DG N2 N N N 167 DG N3 N N N 168 DG C4 C Y N 169 DG HOP3 H N N 170 DG HOP2 H N N 171 DG "H5'" H N N 172 DG "H5''" H N N 173 DG "H4'" H N N 174 DG "H3'" H N N 175 DG "HO3'" H N N 176 DG "H2'" H N N 177 DG "H2''" H N N 178 DG "H1'" H N N 179 DG H8 H N N 180 DG H1 H N N 181 DG H21 H N N 182 DG H22 H N N 183 DT OP3 O N N 184 DT P P N N 185 DT OP1 O N N 186 DT OP2 O N N 187 DT "O5'" O N N 188 DT "C5'" C N N 189 DT "C4'" C N R 190 DT "O4'" O N N 191 DT "C3'" C N S 192 DT "O3'" O N N 193 DT "C2'" C N N 194 DT "C1'" C N R 195 DT N1 N N N 196 DT C2 C N N 197 DT O2 O N N 198 DT N3 N N N 199 DT C4 C N N 200 DT O4 O N N 201 DT C5 C N N 202 DT C7 C N N 203 DT C6 C N N 204 DT HOP3 H N N 205 DT HOP2 H N N 206 DT "H5'" H N N 207 DT "H5''" H N N 208 DT "H4'" H N N 209 DT "H3'" H N N 210 DT "HO3'" H N N 211 DT "H2'" H N N 212 DT "H2''" H N N 213 DT "H1'" H N N 214 DT H3 H N N 215 DT H71 H N N 216 DT H72 H N N 217 DT H73 H N N 218 DT H6 H N N 219 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5CM N1 C2 sing N N 1 5CM N1 C6 sing N N 2 5CM N1 "C1'" sing N N 3 5CM C2 N3 sing N N 4 5CM C2 O2 doub N N 5 5CM N3 C4 doub N N 6 5CM C4 C5 sing N N 7 5CM C4 N4 sing N N 8 5CM C5 C5A sing N N 9 5CM C5 C6 doub N N 10 5CM C5A H5A1 sing N N 11 5CM C5A H5A2 sing N N 12 5CM C5A H5A3 sing N N 13 5CM C6 H6 sing N N 14 5CM N4 HN41 sing N N 15 5CM N4 HN42 sing N N 16 5CM "C1'" "C2'" sing N N 17 5CM "C1'" "O4'" sing N N 18 5CM "C1'" "H1'" sing N N 19 5CM "C2'" "C3'" sing N N 20 5CM "C2'" "H2'" sing N N 21 5CM "C2'" "H2''" sing N N 22 5CM "C3'" "C4'" sing N N 23 5CM "C3'" "O3'" sing N N 24 5CM "C3'" "H3'" sing N N 25 5CM "C4'" "O4'" sing N N 26 5CM "C4'" "C5'" sing N N 27 5CM "C4'" "H4'" sing N N 28 5CM "O3'" "HO3'" sing N N 29 5CM "C5'" "O5'" sing N N 30 5CM "C5'" "H5'" sing N N 31 5CM "C5'" "H5''" sing N N 32 5CM "O5'" P sing N N 33 5CM P OP1 doub N N 34 5CM P OP2 sing N N 35 5CM P OP3 sing N N 36 5CM OP2 HOP2 sing N N 37 5CM OP3 HOP3 sing N N 38 BAP C1 C2 doub Y N 39 BAP C1 C1A sing Y N 40 BAP C1 H1 sing N N 41 BAP C2 C3 sing Y N 42 BAP C2 H2 sing N N 43 BAP C3 C3A doub Y N 44 BAP C3 H3 sing N N 45 BAP C3A C4 sing Y N 46 BAP C3A C3B sing Y N 47 BAP C4 C5 doub Y N 48 BAP C4 H4 sing N N 49 BAP C5 C5A sing Y N 50 BAP C5 H5 sing N N 51 BAP C5A C6 doub Y N 52 BAP C5A C5B sing Y N 53 BAP C6 C7 sing Y N 54 BAP C6 "C4'" sing N N 55 BAP C7 C8 doub Y N 56 BAP C7 "C1'" sing N N 57 BAP C8 C8A sing Y N 58 BAP C8 H8 sing N N 59 BAP C8A C9 doub Y N 60 BAP C8A C5B sing Y N 61 BAP C9 C10 sing Y N 62 BAP C9 H9 sing N N 63 BAP C10 C1A doub Y N 64 BAP C10 H10 sing N N 65 BAP C1A C3B sing Y N 66 BAP C3B C5B doub Y N 67 BAP "C1'" "O1'" sing N N 68 BAP "C1'" "C2'" sing N N 69 BAP "C1'" "H1'" sing N N 70 BAP "O1'" HO1 sing N N 71 BAP "C2'" "O2'" sing N N 72 BAP "C2'" "C3'" sing N N 73 BAP "C2'" "H2'" sing N N 74 BAP "O2'" HO2 sing N N 75 BAP "C3'" "O3'" sing N N 76 BAP "C3'" "C4'" sing N N 77 BAP "C3'" "H3'" sing N N 78 BAP "O3'" HO3 sing N N 79 BAP "C4'" "H4'1" sing N N 80 BAP "C4'" "H4'2" sing N N 81 DA OP3 P sing N N 82 DA OP3 HOP3 sing N N 83 DA P OP1 doub N N 84 DA P OP2 sing N N 85 DA P "O5'" sing N N 86 DA OP2 HOP2 sing N N 87 DA "O5'" "C5'" sing N N 88 DA "C5'" "C4'" sing N N 89 DA "C5'" "H5'" sing N N 90 DA "C5'" "H5''" sing N N 91 DA "C4'" "O4'" sing N N 92 DA "C4'" "C3'" sing N N 93 DA "C4'" "H4'" sing N N 94 DA "O4'" "C1'" sing N N 95 DA "C3'" "O3'" sing N N 96 DA "C3'" "C2'" sing N N 97 DA "C3'" "H3'" sing N N 98 DA "O3'" "HO3'" sing N N 99 DA "C2'" "C1'" sing N N 100 DA "C2'" "H2'" sing N N 101 DA "C2'" "H2''" sing N N 102 DA "C1'" N9 sing N N 103 DA "C1'" "H1'" sing N N 104 DA N9 C8 sing Y N 105 DA N9 C4 sing Y N 106 DA C8 N7 doub Y N 107 DA C8 H8 sing N N 108 DA N7 C5 sing Y N 109 DA C5 C6 sing Y N 110 DA C5 C4 doub Y N 111 DA C6 N6 sing N N 112 DA C6 N1 doub Y N 113 DA N6 H61 sing N N 114 DA N6 H62 sing N N 115 DA N1 C2 sing Y N 116 DA C2 N3 doub Y N 117 DA C2 H2 sing N N 118 DA N3 C4 sing Y N 119 DC OP3 P sing N N 120 DC OP3 HOP3 sing N N 121 DC P OP1 doub N N 122 DC P OP2 sing N N 123 DC P "O5'" sing N N 124 DC OP2 HOP2 sing N N 125 DC "O5'" "C5'" sing N N 126 DC "C5'" "C4'" sing N N 127 DC "C5'" "H5'" sing N N 128 DC "C5'" "H5''" sing N N 129 DC "C4'" "O4'" sing N N 130 DC "C4'" "C3'" sing N N 131 DC "C4'" "H4'" sing N N 132 DC "O4'" "C1'" sing N N 133 DC "C3'" "O3'" sing N N 134 DC "C3'" "C2'" sing N N 135 DC "C3'" "H3'" sing N N 136 DC "O3'" "HO3'" sing N N 137 DC "C2'" "C1'" sing N N 138 DC "C2'" "H2'" sing N N 139 DC "C2'" "H2''" sing N N 140 DC "C1'" N1 sing N N 141 DC "C1'" "H1'" sing N N 142 DC N1 C2 sing N N 143 DC N1 C6 sing N N 144 DC C2 O2 doub N N 145 DC C2 N3 sing N N 146 DC N3 C4 doub N N 147 DC C4 N4 sing N N 148 DC C4 C5 sing N N 149 DC N4 H41 sing N N 150 DC N4 H42 sing N N 151 DC C5 C6 doub N N 152 DC C5 H5 sing N N 153 DC C6 H6 sing N N 154 DG OP3 P sing N N 155 DG OP3 HOP3 sing N N 156 DG P OP1 doub N N 157 DG P OP2 sing N N 158 DG P "O5'" sing N N 159 DG OP2 HOP2 sing N N 160 DG "O5'" "C5'" sing N N 161 DG "C5'" "C4'" sing N N 162 DG "C5'" "H5'" sing N N 163 DG "C5'" "H5''" sing N N 164 DG "C4'" "O4'" sing N N 165 DG "C4'" "C3'" sing N N 166 DG "C4'" "H4'" sing N N 167 DG "O4'" "C1'" sing N N 168 DG "C3'" "O3'" sing N N 169 DG "C3'" "C2'" sing N N 170 DG "C3'" "H3'" sing N N 171 DG "O3'" "HO3'" sing N N 172 DG "C2'" "C1'" sing N N 173 DG "C2'" "H2'" sing N N 174 DG "C2'" "H2''" sing N N 175 DG "C1'" N9 sing N N 176 DG "C1'" "H1'" sing N N 177 DG N9 C8 sing Y N 178 DG N9 C4 sing Y N 179 DG C8 N7 doub Y N 180 DG C8 H8 sing N N 181 DG N7 C5 sing Y N 182 DG C5 C6 sing N N 183 DG C5 C4 doub Y N 184 DG C6 O6 doub N N 185 DG C6 N1 sing N N 186 DG N1 C2 sing N N 187 DG N1 H1 sing N N 188 DG C2 N2 sing N N 189 DG C2 N3 doub N N 190 DG N2 H21 sing N N 191 DG N2 H22 sing N N 192 DG N3 C4 sing N N 193 DT OP3 P sing N N 194 DT OP3 HOP3 sing N N 195 DT P OP1 doub N N 196 DT P OP2 sing N N 197 DT P "O5'" sing N N 198 DT OP2 HOP2 sing N N 199 DT "O5'" "C5'" sing N N 200 DT "C5'" "C4'" sing N N 201 DT "C5'" "H5'" sing N N 202 DT "C5'" "H5''" sing N N 203 DT "C4'" "O4'" sing N N 204 DT "C4'" "C3'" sing N N 205 DT "C4'" "H4'" sing N N 206 DT "O4'" "C1'" sing N N 207 DT "C3'" "O3'" sing N N 208 DT "C3'" "C2'" sing N N 209 DT "C3'" "H3'" sing N N 210 DT "O3'" "HO3'" sing N N 211 DT "C2'" "C1'" sing N N 212 DT "C2'" "H2'" sing N N 213 DT "C2'" "H2''" sing N N 214 DT "C1'" N1 sing N N 215 DT "C1'" "H1'" sing N N 216 DT N1 C2 sing N N 217 DT N1 C6 sing N N 218 DT C2 O2 doub N N 219 DT C2 N3 sing N N 220 DT N3 C4 sing N N 221 DT N3 H3 sing N N 222 DT C4 O4 doub N N 223 DT C4 C5 sing N N 224 DT C5 C7 sing N N 225 DT C5 C6 doub N N 226 DT C7 H71 sing N N 227 DT C7 H72 sing N N 228 DT C7 H73 sing N N 229 DT C6 H6 sing N N 230 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1Y9H 'double helix' 1Y9H 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 B DG 11 1_555 0.108 -0.384 0.164 18.828 -57.980 -32.386 1 A_DC1:DG22_B A 1 ? B 22 ? ? 1 1 A DC 2 1_555 B DG 10 1_555 0.427 -0.250 0.299 -12.298 -0.805 -2.501 2 A_DC2:DG21_B A 2 ? B 21 ? 19 1 1 A DA 3 1_555 B DT 9 1_555 0.178 -0.163 0.179 -0.893 -5.962 3.587 3 A_DA3:DT20_B A 3 ? B 20 ? 20 1 1 A DT 4 1_555 B DA 8 1_555 0.470 -0.332 -0.094 1.180 -9.775 1.213 4 A_DT4:DA19_B A 4 ? B 19 ? 20 1 1 A 5CM 5 1_555 B DG 7 1_555 0.985 -0.400 -0.246 14.774 -3.441 3.342 5 A_5CM5:DG18_B A 5 ? B 18 ? 19 1 1 A DC 7 1_555 B DG 5 1_555 0.125 -0.109 -0.245 -9.272 8.622 -8.641 6 A_DC7:DG16_B A 7 ? B 16 ? 19 1 1 A DT 8 1_555 B DA 4 1_555 -0.289 -0.160 0.064 -4.781 -11.061 -1.335 7 A_DT8:DA15_B A 8 ? B 15 ? 20 1 1 A DA 9 1_555 B DT 3 1_555 0.675 -0.238 0.441 -11.151 -7.103 -3.376 8 A_DA9:DT14_B A 9 ? B 14 ? 20 1 1 A DC 10 1_555 B DG 2 1_555 0.695 -0.324 0.357 -8.348 0.135 1.148 9 A_DC10:DG13_B A 10 ? B 13 ? 19 1 1 A DC 11 1_555 B DG 1 1_555 0.989 -0.529 -0.209 -6.952 5.758 2.888 10 A_DC11:DG12_B A 11 ? B 12 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 B DG 11 1_555 A DC 2 1_555 B DG 10 1_555 2.238 0.148 4.493 -2.151 -18.843 51.260 1.723 -2.625 4.119 -20.978 2.395 54.433 1 AA_DC1DC2:DG21DG22_BB A 1 ? B 22 ? A 2 ? B 21 ? 1 A DC 2 1_555 B DG 10 1_555 A DA 3 1_555 B DT 9 1_555 0.927 -0.498 2.973 7.502 -9.905 31.467 0.692 -0.421 3.118 -17.437 -13.206 33.774 2 AA_DC2DA3:DT20DG21_BB A 2 ? B 21 ? A 3 ? B 20 ? 1 A DA 3 1_555 B DT 9 1_555 A DT 4 1_555 B DA 8 1_555 -0.310 -1.075 3.284 1.084 -4.517 37.550 -1.065 0.620 3.376 -6.985 -1.676 37.826 3 AA_DA3DT4:DA19DT20_BB A 3 ? B 20 ? A 4 ? B 19 ? 1 A DT 4 1_555 B DA 8 1_555 A 5CM 5 1_555 B DG 7 1_555 0.154 0.157 2.846 3.912 9.219 42.273 -0.574 0.126 2.822 12.572 -5.334 43.390 4 AA_DT45CM5:DG18DA19_BB A 4 ? B 19 ? A 5 ? B 18 ? 1 A 5CM 5 1_555 B DG 7 1_555 A DC 7 1_555 B DG 5 1_555 2.236 0.409 7.072 9.247 -1.436 64.329 0.514 -1.229 7.290 -1.341 -8.637 64.934 5 AA_5CM5DC7:DG16DG18_BB A 5 ? B 18 ? A 7 ? B 16 ? 1 A DC 7 1_555 B DG 5 1_555 A DT 8 1_555 B DA 4 1_555 -0.270 -1.462 3.140 -1.949 -3.560 33.647 -1.944 0.154 3.283 -6.123 3.352 33.884 6 AA_DC7DT8:DA15DG16_BB A 7 ? B 16 ? A 8 ? B 15 ? 1 A DT 8 1_555 B DA 4 1_555 A DA 9 1_555 B DT 3 1_555 0.611 -0.846 3.071 -1.989 9.223 44.338 -1.847 -0.955 2.821 12.059 2.600 45.281 7 AA_DT8DA9:DT14DA15_BB A 8 ? B 15 ? A 9 ? B 14 ? 1 A DA 9 1_555 B DT 3 1_555 A DC 10 1_555 B DG 2 1_555 0.182 -0.719 3.132 0.143 -1.113 36.208 -1.006 -0.274 3.152 -1.790 -0.230 36.225 8 AA_DA9DC10:DG13DT14_BB A 9 ? B 14 ? A 10 ? B 13 ? 1 A DC 10 1_555 B DG 2 1_555 A DC 11 1_555 B DG 1 1_555 1.132 -0.587 3.171 6.745 -3.828 36.354 -0.405 -0.868 3.363 -6.051 -10.662 37.144 9 AA_DC10DC11:DG12DG13_BB A 10 ? B 13 ? A 11 ? B 12 ? # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Varian _pdbx_nmr_spectrometer.model INOVA _pdbx_nmr_spectrometer.field_strength 600 # _atom_sites.entry_id 1Y9H _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P # loop_