data_1YNW # _entry.id 1YNW # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.376 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1YNW pdb_00001ynw 10.2210/pdb1ynw/pdb NDB PD0626 ? ? RCSB RCSB031732 ? ? WWPDB D_1000031732 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1YNW _pdbx_database_status.recvd_initial_deposition_date 2005-01-25 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry N _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Shaffer, P.L.' 1 'Gewirth, D.T.' 2 # _citation.id primary _citation.title 'Structural analysis of RXR-VDR interactions on DR3 DNA' _citation.journal_abbrev 'J.Steroid Biochem.Mol.Biol.' _citation.journal_volume 89-90 _citation.page_first 215 _citation.page_last 219 _citation.year 2004 _citation.journal_id_ASTM JSBBEZ _citation.country UK _citation.journal_id_ISSN 0960-0760 _citation.journal_id_CSD 2046 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15225774 _citation.pdbx_database_id_DOI 10.1016/j.jsbmb.2004.03.084 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Shaffer, P.L.' 1 ? primary 'Gewirth, D.T.' 2 ? # _cell.entry_id 1YNW _cell.length_a 123.104 _cell.length_b 57.049 _cell.length_c 73.438 _cell.angle_alpha 90.00 _cell.angle_beta 110.31 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1YNW _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.cell_setting monoclinic _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-d(*TP*TP*AP*GP*GP*TP*CP*AP*CP*GP*AP*AP*GP*GP*TP*CP*AP*A)-3'" 5564.629 1 ? ? ? 'DR3 Response Element' 2 polymer syn "5'-d(*TP*TP*TP*GP*AP*CP*CP*TP*TP*CP*GP*TP*GP*AP*CP*CP*TP*A)-3'" 5457.539 1 ? ? ? 'DR3 Response Element' 3 polymer man 'Vitamin D3 Receptor' 12784.103 1 ? P61A,F62A,H75A 'DNA-binding Domain (Residues 16-125)' ? 4 polymer man 'Retinoic acid receptor RXR-alpha' 11642.225 1 ? ? 'DNA-binding Domain (Residues 130-228)' ? 5 non-polymer syn 'ZINC ION' 65.409 4 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 3 'VDR; 1,25-dihydroxyvitamin D3 receptor' 4 '9-cis Retinoic Acid Receptor; Retinoid X receptor alpha' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DT)(DT)(DA)(DG)(DG)(DT)(DC)(DA)(DC)(DG)(DA)(DA)(DG)(DG)(DT)(DC)(DA)(DA)' TTAGGTCACGAAGGTCAA C ? 2 polydeoxyribonucleotide no no '(DT)(DT)(DT)(DG)(DA)(DC)(DC)(DT)(DT)(DC)(DG)(DT)(DG)(DA)(DC)(DC)(DT)(DA)' TTTGACCTTCGTGACCTA D ? 3 'polypeptide(L)' no no ;FDRNVPRICGVCGDRATGFHFNAMTCEGCKGFFRRSMKRKALFTCAANGDCRITKDNRRACQACRLKRCVDIGMMKEFIL TDEEVQRKREMILKRKEEEALKDSLRPKLS ; ;FDRNVPRICGVCGDRATGFHFNAMTCEGCKGFFRRSMKRKALFTCAANGDCRITKDNRRACQACRLKRCVDIGMMKEFIL TDEEVQRKREMILKRKEEEALKDSLRPKLS ; A ? 4 'polypeptide(L)' no no ;FTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEER QRGKDRNENEVESTSSANE ; ;FTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEER QRGKDRNENEVESTSSANE ; B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DT n 1 2 DT n 1 3 DA n 1 4 DG n 1 5 DG n 1 6 DT n 1 7 DC n 1 8 DA n 1 9 DC n 1 10 DG n 1 11 DA n 1 12 DA n 1 13 DG n 1 14 DG n 1 15 DT n 1 16 DC n 1 17 DA n 1 18 DA n 2 1 DT n 2 2 DT n 2 3 DT n 2 4 DG n 2 5 DA n 2 6 DC n 2 7 DC n 2 8 DT n 2 9 DT n 2 10 DC n 2 11 DG n 2 12 DT n 2 13 DG n 2 14 DA n 2 15 DC n 2 16 DC n 2 17 DT n 2 18 DA n 3 1 PHE n 3 2 ASP n 3 3 ARG n 3 4 ASN n 3 5 VAL n 3 6 PRO n 3 7 ARG n 3 8 ILE n 3 9 CYS n 3 10 GLY n 3 11 VAL n 3 12 CYS n 3 13 GLY n 3 14 ASP n 3 15 ARG n 3 16 ALA n 3 17 THR n 3 18 GLY n 3 19 PHE n 3 20 HIS n 3 21 PHE n 3 22 ASN n 3 23 ALA n 3 24 MET n 3 25 THR n 3 26 CYS n 3 27 GLU n 3 28 GLY n 3 29 CYS n 3 30 LYS n 3 31 GLY n 3 32 PHE n 3 33 PHE n 3 34 ARG n 3 35 ARG n 3 36 SER n 3 37 MET n 3 38 LYS n 3 39 ARG n 3 40 LYS n 3 41 ALA n 3 42 LEU n 3 43 PHE n 3 44 THR n 3 45 CYS n 3 46 ALA n 3 47 ALA n 3 48 ASN n 3 49 GLY n 3 50 ASP n 3 51 CYS n 3 52 ARG n 3 53 ILE n 3 54 THR n 3 55 LYS n 3 56 ASP n 3 57 ASN n 3 58 ARG n 3 59 ARG n 3 60 ALA n 3 61 CYS n 3 62 GLN n 3 63 ALA n 3 64 CYS n 3 65 ARG n 3 66 LEU n 3 67 LYS n 3 68 ARG n 3 69 CYS n 3 70 VAL n 3 71 ASP n 3 72 ILE n 3 73 GLY n 3 74 MET n 3 75 MET n 3 76 LYS n 3 77 GLU n 3 78 PHE n 3 79 ILE n 3 80 LEU n 3 81 THR n 3 82 ASP n 3 83 GLU n 3 84 GLU n 3 85 VAL n 3 86 GLN n 3 87 ARG n 3 88 LYS n 3 89 ARG n 3 90 GLU n 3 91 MET n 3 92 ILE n 3 93 LEU n 3 94 LYS n 3 95 ARG n 3 96 LYS n 3 97 GLU n 3 98 GLU n 3 99 GLU n 3 100 ALA n 3 101 LEU n 3 102 LYS n 3 103 ASP n 3 104 SER n 3 105 LEU n 3 106 ARG n 3 107 PRO n 3 108 LYS n 3 109 LEU n 3 110 SER n 4 1 PHE n 4 2 THR n 4 3 LYS n 4 4 HIS n 4 5 ILE n 4 6 CYS n 4 7 ALA n 4 8 ILE n 4 9 CYS n 4 10 GLY n 4 11 ASP n 4 12 ARG n 4 13 SER n 4 14 SER n 4 15 GLY n 4 16 LYS n 4 17 HIS n 4 18 TYR n 4 19 GLY n 4 20 VAL n 4 21 TYR n 4 22 SER n 4 23 CYS n 4 24 GLU n 4 25 GLY n 4 26 CYS n 4 27 LYS n 4 28 GLY n 4 29 PHE n 4 30 PHE n 4 31 LYS n 4 32 ARG n 4 33 THR n 4 34 VAL n 4 35 ARG n 4 36 LYS n 4 37 ASP n 4 38 LEU n 4 39 THR n 4 40 TYR n 4 41 THR n 4 42 CYS n 4 43 ARG n 4 44 ASP n 4 45 ASN n 4 46 LYS n 4 47 ASP n 4 48 CYS n 4 49 LEU n 4 50 ILE n 4 51 ASP n 4 52 LYS n 4 53 ARG n 4 54 GLN n 4 55 ARG n 4 56 ASN n 4 57 ARG n 4 58 CYS n 4 59 GLN n 4 60 TYR n 4 61 CYS n 4 62 ARG n 4 63 TYR n 4 64 GLN n 4 65 LYS n 4 66 CYS n 4 67 LEU n 4 68 ALA n 4 69 MET n 4 70 GLY n 4 71 MET n 4 72 LYS n 4 73 ARG n 4 74 GLU n 4 75 ALA n 4 76 VAL n 4 77 GLN n 4 78 GLU n 4 79 GLU n 4 80 ARG n 4 81 GLN n 4 82 ARG n 4 83 GLY n 4 84 LYS n 4 85 ASP n 4 86 ARG n 4 87 ASN n 4 88 GLU n 4 89 ASN n 4 90 GLU n 4 91 VAL n 4 92 GLU n 4 93 SER n 4 94 THR n 4 95 SER n 4 96 SER n 4 97 ALA n 4 98 ASN n 4 99 GLU n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 3 1 sample ? ? ? human Homo 'VDR, NR1I1' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli BL21(DE3)' 469008 Escherichia ? ? 'Escherichia coli' ? ? 'BL21(DE3)' ? ? ? ? ? ? ? plasmid ? ? ? 'pET11a-VDR(RPKLS)' ? ? 4 1 sample ? ? ? human Homo 'RXRA, NR2B1' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli BL21(DE3)' 469008 Escherichia ? ? 'Escherichia coli' ? ? 'BL21(DE3)' ? ? ? ? ? ? ? plasmid ? ? ? 'pGEX-RXR(SANE)' ? ? # loop_ _struct_ref.id _struct_ref.entity_id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 3 UNP VDR_HUMAN P11473 16 ;FDRNVPRICGVCGDRATGFHFNAMTCEGCKGFFRRSMKRKALFTCPFNGDCRITKDNRRHCQACRLKRCVDIGMMKEFIL TDEEVQRKREMILKRKEEEALKDSLRPKLS ; ? 2 4 UNP RXRA_HUMAN P19793 130 ;FTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEER QRGKDRNENEVESTSSANE ; ? 3 1 PDB 1YNW 1YNW ? ? ? 4 2 PDB 1YNW 1YNW ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1YNW A 1 ? 110 ? P11473 16 ? 125 ? 16 125 2 2 1YNW B 1 ? 99 ? P19793 130 ? 228 ? 230 328 3 3 1YNW C 1 ? 18 ? 1YNW 401 ? 418 ? 401 418 4 4 1YNW D 1 ? 18 ? 1YNW 419 ? 436 ? 419 436 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1YNW ALA A 46 ? UNP P11473 PRO 61 'engineered mutation' 61 1 1 1YNW ALA A 47 ? UNP P11473 PHE 62 'engineered mutation' 62 2 1 1YNW ALA A 60 ? UNP P11473 HIS 75 'engineered mutation' 75 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.entry_id 1YNW _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_percent_sol 70.3 _exptl_crystal.density_Matthews 4.2 _exptl_crystal.density_meas ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details 'PEG 8000, ammonium citrate, Tris, glycerol, DTT, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.details 1 1 1 'PEG 8000' ? ? ? 1 2 1 'ammonium citrate' ? ? ? 1 3 1 Tris ? ? ? 1 4 1 glycerol ? ? ? 1 5 1 DTT ? ? ? 1 6 2 'PEG 8000' ? ? ? 1 7 2 'ammonium citrate' ? ? ? 1 8 2 glycerol ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2002-03-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.1808 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 14-ID-B' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 14-ID-B _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.1808 # _reflns.entry_id 1YNW _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50. _reflns.d_resolution_high 3.00 _reflns.number_obs 18127 _reflns.number_all ? _reflns.percent_possible_obs 96.3 _reflns.pdbx_Rmerge_I_obs 0.045 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 31.2 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.4 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 3.00 _reflns_shell.d_res_low 3.11 _reflns_shell.percent_possible_all 97.5 _reflns_shell.Rmerge_I_obs 0.34 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.6 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1844 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1YNW _refine.ls_number_reflns_obs 8849 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 800311.58 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 50. _refine.ls_d_res_high 3.00 _refine.ls_percent_reflns_obs 87.6 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.232 _refine.ls_R_factor_R_free 0.283 _refine.ls_R_factor_R_free_error 0.010 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 823 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 97.6 _refine.aniso_B[1][1] -20.69 _refine.aniso_B[2][2] 24.55 _refine.aniso_B[3][3] -3.86 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -18.54 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.287038 _refine.solvent_model_param_bsol 34.7974 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 1KB4 and 1DSZ' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1YNW _refine_analyze.Luzzati_coordinate_error_obs 0.45 _refine_analyze.Luzzati_sigma_a_obs 0.63 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.53 _refine_analyze.Luzzati_sigma_a_free 0.53 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1335 _refine_hist.pdbx_number_atoms_nucleic_acid 731 _refine_hist.pdbx_number_atoms_ligand 4 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2070 _refine_hist.d_res_high 3.00 _refine_hist.d_res_low 50. # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.014 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.6 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 21.5 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 1.42 ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 0.91 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 1.61 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 1.63 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 2.65 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 10 _refine_ls_shell.d_res_high 3.00 _refine_ls_shell.d_res_low 3.11 _refine_ls_shell.number_reflns_R_work 1179 _refine_ls_shell.R_factor_R_work 0.431 _refine_ls_shell.percent_reflns_obs 66.9 _refine_ls_shell.R_factor_R_free 0.373 _refine_ls_shell.R_factor_R_free_error 0.043 _refine_ls_shell.percent_reflns_R_free 6.0 _refine_ls_shell.number_reflns_R_free 75 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 DNA-RNA_REP.PARAM DNA-RNA.TOP 'X-RAY DIFFRACTION' 3 ION.PARAM ION.TOP 'X-RAY DIFFRACTION' 4 PARAM_ZN ? 'X-RAY DIFFRACTION' # _struct.entry_id 1YNW _struct.title 'Crystal Structure of Vitamin D Receptor and 9-cis Retinoic Acid Receptor DNA-Binding Domains Bound to a DR3 Response Element' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1YNW _struct_keywords.pdbx_keywords TRANSCRIPTION/DNA _struct_keywords.text 'VDR; RXR; Nuclear Receptor; Protein-DNA Complex, TRANSCRIPTION-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? H N N 5 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 CYS C 26 ? LYS C 40 ? CYS A 41 LYS A 55 1 ? 15 HELX_P HELX_P2 2 ASN C 57 ? ALA C 60 ? ASN A 72 ALA A 75 5 ? 4 HELX_P HELX_P3 3 CYS C 61 ? ILE C 72 ? CYS A 76 ILE A 87 1 ? 12 HELX_P HELX_P4 4 MET C 75 ? ILE C 79 ? MET A 90 ILE A 94 5 ? 5 HELX_P HELX_P5 5 THR C 81 ? ARG C 95 ? THR A 96 ARG A 110 1 ? 15 HELX_P HELX_P6 6 GLU D 24 ? LYS D 36 ? GLU B 253 LYS B 265 1 ? 13 HELX_P HELX_P7 7 CYS D 58 ? MET D 69 ? CYS B 287 MET B 298 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? C CYS 9 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 24 A ZN 150 1_555 ? ? ? ? ? ? ? 2.469 ? ? metalc2 metalc ? ? C CYS 12 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 27 A ZN 150 1_555 ? ? ? ? ? ? ? 2.655 ? ? metalc3 metalc ? ? C CYS 26 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 41 A ZN 150 1_555 ? ? ? ? ? ? ? 2.608 ? ? metalc4 metalc ? ? C CYS 29 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 44 A ZN 150 1_555 ? ? ? ? ? ? ? 2.536 ? ? metalc5 metalc ? ? C CYS 45 SG ? ? ? 1_555 F ZN . ZN ? ? A CYS 60 A ZN 151 1_555 ? ? ? ? ? ? ? 2.426 ? ? metalc6 metalc ? ? C CYS 51 SG ? ? ? 1_555 F ZN . ZN ? ? A CYS 66 A ZN 151 1_555 ? ? ? ? ? ? ? 2.274 ? ? metalc7 metalc ? ? C CYS 61 SG ? ? ? 1_555 F ZN . ZN ? ? A CYS 76 A ZN 151 1_555 ? ? ? ? ? ? ? 2.354 ? ? metalc8 metalc ? ? C CYS 64 SG ? ? ? 1_555 F ZN . ZN ? ? A CYS 79 A ZN 151 1_555 ? ? ? ? ? ? ? 2.375 ? ? metalc9 metalc ? ? D CYS 6 SG ? ? ? 1_555 G ZN . ZN ? ? B CYS 235 B ZN 350 1_555 ? ? ? ? ? ? ? 2.422 ? ? metalc10 metalc ? ? D CYS 9 SG ? ? ? 1_555 G ZN . ZN ? ? B CYS 238 B ZN 350 1_555 ? ? ? ? ? ? ? 2.473 ? ? metalc11 metalc ? ? D CYS 23 SG ? ? ? 1_555 G ZN . ZN ? ? B CYS 252 B ZN 350 1_555 ? ? ? ? ? ? ? 2.553 ? ? metalc12 metalc ? ? D CYS 26 SG ? ? ? 1_555 G ZN . ZN ? ? B CYS 255 B ZN 350 1_555 ? ? ? ? ? ? ? 2.221 ? ? metalc13 metalc ? ? D CYS 42 SG ? ? ? 1_555 H ZN . ZN ? ? B CYS 271 B ZN 351 1_555 ? ? ? ? ? ? ? 2.578 ? ? metalc14 metalc ? ? D CYS 48 SG ? ? ? 1_555 H ZN . ZN ? ? B CYS 277 B ZN 351 1_555 ? ? ? ? ? ? ? 2.463 ? ? metalc15 metalc ? ? D CYS 58 SG ? ? ? 1_555 H ZN . ZN ? ? B CYS 287 B ZN 351 1_555 ? ? ? ? ? ? ? 2.227 ? ? metalc16 metalc ? ? D CYS 61 SG ? ? ? 1_555 H ZN . ZN ? ? B CYS 290 B ZN 351 1_555 ? ? ? ? ? ? ? 2.761 ? ? hydrog1 hydrog ? ? A DT 2 N3 ? ? ? 1_555 B DA 18 N1 ? ? C DT 402 D DA 436 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DT 2 O4 ? ? ? 1_555 B DA 18 N6 ? ? C DT 402 D DA 436 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DA 3 N1 ? ? ? 1_555 B DT 17 N3 ? ? C DA 403 D DT 435 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DA 3 N6 ? ? ? 1_555 B DT 17 O4 ? ? C DA 403 D DT 435 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DG 4 N1 ? ? ? 1_555 B DC 16 N3 ? ? C DG 404 D DC 434 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 4 N2 ? ? ? 1_555 B DC 16 O2 ? ? C DG 404 D DC 434 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B DC 16 N4 ? ? C DG 404 D DC 434 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 5 N1 ? ? ? 1_555 B DC 15 N3 ? ? C DG 405 D DC 433 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 5 N2 ? ? ? 1_555 B DC 15 O2 ? ? C DG 405 D DC 433 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 5 O6 ? ? ? 1_555 B DC 15 N4 ? ? C DG 405 D DC 433 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DT 6 N3 ? ? ? 1_555 B DA 14 N1 ? ? C DT 406 D DA 432 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DT 6 O4 ? ? ? 1_555 B DA 14 N6 ? ? C DT 406 D DA 432 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 7 N3 ? ? ? 1_555 B DG 13 N1 ? ? C DC 407 D DG 431 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 7 N4 ? ? ? 1_555 B DG 13 O6 ? ? C DC 407 D DG 431 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 7 O2 ? ? ? 1_555 B DG 13 N2 ? ? C DC 407 D DG 431 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DA 8 N1 ? ? ? 1_555 B DT 12 N3 ? ? C DA 408 D DT 430 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DA 8 N6 ? ? ? 1_555 B DT 12 O4 ? ? C DA 408 D DT 430 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DC 9 N3 ? ? ? 1_555 B DG 11 N1 ? ? C DC 409 D DG 429 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DC 9 N4 ? ? ? 1_555 B DG 11 O6 ? ? C DC 409 D DG 429 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DC 9 O2 ? ? ? 1_555 B DG 11 N2 ? ? C DC 409 D DG 429 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DG 10 N1 ? ? ? 1_555 B DC 10 N3 ? ? C DG 410 D DC 428 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DG 10 N2 ? ? ? 1_555 B DC 10 O2 ? ? C DG 410 D DC 428 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DG 10 O6 ? ? ? 1_555 B DC 10 N4 ? ? C DG 410 D DC 428 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DA 11 N1 ? ? ? 1_555 B DT 9 N3 ? ? C DA 411 D DT 427 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DA 11 N6 ? ? ? 1_555 B DT 9 O4 ? ? C DA 411 D DT 427 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DA 12 N1 ? ? ? 1_555 B DT 8 N3 ? ? C DA 412 D DT 426 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DA 12 N6 ? ? ? 1_555 B DT 8 O4 ? ? C DA 412 D DT 426 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DG 13 N1 ? ? ? 1_555 B DC 7 N3 ? ? C DG 413 D DC 425 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DG 13 N2 ? ? ? 1_555 B DC 7 O2 ? ? C DG 413 D DC 425 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DG 13 O6 ? ? ? 1_555 B DC 7 N4 ? ? C DG 413 D DC 425 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DG 14 N1 ? ? ? 1_555 B DC 6 N3 ? ? C DG 414 D DC 424 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DG 14 N2 ? ? ? 1_555 B DC 6 O2 ? ? C DG 414 D DC 424 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DG 14 O6 ? ? ? 1_555 B DC 6 N4 ? ? C DG 414 D DC 424 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DT 15 N3 ? ? ? 1_555 B DA 5 N1 ? ? C DT 415 D DA 423 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A DT 15 O4 ? ? ? 1_555 B DA 5 N6 ? ? C DT 415 D DA 423 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DC 16 N3 ? ? ? 1_555 B DG 4 N1 ? ? C DC 416 D DG 422 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A DC 16 N4 ? ? ? 1_555 B DG 4 O6 ? ? C DC 416 D DG 422 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A DC 16 O2 ? ? ? 1_555 B DG 4 N2 ? ? C DC 416 D DG 422 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A DA 17 N1 ? ? ? 1_555 B DT 3 N3 ? ? C DA 417 D DT 421 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A DA 17 N6 ? ? ? 1_555 B DT 3 O4 ? ? C DA 417 D DT 421 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A DA 18 N1 ? ? ? 1_555 B DT 2 N3 ? ? C DA 418 D DT 420 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A DA 18 N6 ? ? ? 1_555 B DT 2 O4 ? ? C DA 418 D DT 420 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id A _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE C 19 ? HIS C 20 ? PHE A 34 HIS A 35 A 2 ALA C 23 ? MET C 24 ? ALA A 38 MET A 39 # _pdbx_struct_sheet_hbond.sheet_id A _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id HIS _pdbx_struct_sheet_hbond.range_1_label_asym_id C _pdbx_struct_sheet_hbond.range_1_label_seq_id 20 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id HIS _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 35 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id ALA _pdbx_struct_sheet_hbond.range_2_label_asym_id C _pdbx_struct_sheet_hbond.range_2_label_seq_id 23 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id ALA _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 38 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 150 ? 4 'BINDING SITE FOR RESIDUE ZN A 150' AC2 Software A ZN 151 ? 4 'BINDING SITE FOR RESIDUE ZN A 151' AC3 Software B ZN 350 ? 4 'BINDING SITE FOR RESIDUE ZN B 350' AC4 Software B ZN 351 ? 4 'BINDING SITE FOR RESIDUE ZN B 351' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS C 9 ? CYS A 24 . ? 1_555 ? 2 AC1 4 CYS C 12 ? CYS A 27 . ? 1_555 ? 3 AC1 4 CYS C 26 ? CYS A 41 . ? 1_555 ? 4 AC1 4 CYS C 29 ? CYS A 44 . ? 1_555 ? 5 AC2 4 CYS C 45 ? CYS A 60 . ? 1_555 ? 6 AC2 4 CYS C 51 ? CYS A 66 . ? 1_555 ? 7 AC2 4 CYS C 61 ? CYS A 76 . ? 1_555 ? 8 AC2 4 CYS C 64 ? CYS A 79 . ? 1_555 ? 9 AC3 4 CYS D 6 ? CYS B 235 . ? 1_555 ? 10 AC3 4 CYS D 9 ? CYS B 238 . ? 1_555 ? 11 AC3 4 CYS D 23 ? CYS B 252 . ? 1_555 ? 12 AC3 4 CYS D 26 ? CYS B 255 . ? 1_555 ? 13 AC4 4 CYS D 42 ? CYS B 271 . ? 1_555 ? 14 AC4 4 CYS D 48 ? CYS B 277 . ? 1_555 ? 15 AC4 4 CYS D 58 ? CYS B 287 . ? 1_555 ? 16 AC4 4 CYS D 61 ? CYS B 290 . ? 1_555 ? # _atom_sites.entry_id 1YNW _atom_sites.fract_transf_matrix[1][1] 0.008123 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.003006 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017529 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014520 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DT 1 401 401 DT T C . n A 1 2 DT 2 402 402 DT T C . n A 1 3 DA 3 403 403 DA A C . n A 1 4 DG 4 404 404 DG G C . n A 1 5 DG 5 405 405 DG G C . n A 1 6 DT 6 406 406 DT T C . n A 1 7 DC 7 407 407 DC C C . n A 1 8 DA 8 408 408 DA A C . n A 1 9 DC 9 409 409 DC C C . n A 1 10 DG 10 410 410 DG G C . n A 1 11 DA 11 411 411 DA A C . n A 1 12 DA 12 412 412 DA A C . n A 1 13 DG 13 413 413 DG G C . n A 1 14 DG 14 414 414 DG G C . n A 1 15 DT 15 415 415 DT T C . n A 1 16 DC 16 416 416 DC C C . n A 1 17 DA 17 417 417 DA A C . n A 1 18 DA 18 418 418 DA A C . n B 2 1 DT 1 419 419 DT T D . n B 2 2 DT 2 420 420 DT T D . n B 2 3 DT 3 421 421 DT T D . n B 2 4 DG 4 422 422 DG G D . n B 2 5 DA 5 423 423 DA A D . n B 2 6 DC 6 424 424 DC C D . n B 2 7 DC 7 425 425 DC C D . n B 2 8 DT 8 426 426 DT T D . n B 2 9 DT 9 427 427 DT T D . n B 2 10 DC 10 428 428 DC C D . n B 2 11 DG 11 429 429 DG G D . n B 2 12 DT 12 430 430 DT T D . n B 2 13 DG 13 431 431 DG G D . n B 2 14 DA 14 432 432 DA A D . n B 2 15 DC 15 433 433 DC C D . n B 2 16 DC 16 434 434 DC C D . n B 2 17 DT 17 435 435 DT T D . n B 2 18 DA 18 436 436 DA A D . n C 3 1 PHE 1 16 ? ? ? A . n C 3 2 ASP 2 17 ? ? ? A . n C 3 3 ARG 3 18 18 ARG ARG A . n C 3 4 ASN 4 19 19 ASN ASN A . n C 3 5 VAL 5 20 20 VAL VAL A . n C 3 6 PRO 6 21 21 PRO PRO A . n C 3 7 ARG 7 22 22 ARG ARG A . n C 3 8 ILE 8 23 23 ILE ILE A . n C 3 9 CYS 9 24 24 CYS CYS A . n C 3 10 GLY 10 25 25 GLY GLY A . n C 3 11 VAL 11 26 26 VAL VAL A . n C 3 12 CYS 12 27 27 CYS CYS A . n C 3 13 GLY 13 28 28 GLY GLY A . n C 3 14 ASP 14 29 29 ASP ASP A . n C 3 15 ARG 15 30 30 ARG ARG A . n C 3 16 ALA 16 31 31 ALA ALA A . n C 3 17 THR 17 32 32 THR THR A . n C 3 18 GLY 18 33 33 GLY GLY A . n C 3 19 PHE 19 34 34 PHE PHE A . n C 3 20 HIS 20 35 35 HIS HIS A . n C 3 21 PHE 21 36 36 PHE PHE A . n C 3 22 ASN 22 37 37 ASN ASN A . n C 3 23 ALA 23 38 38 ALA ALA A . n C 3 24 MET 24 39 39 MET MET A . n C 3 25 THR 25 40 40 THR THR A . n C 3 26 CYS 26 41 41 CYS CYS A . n C 3 27 GLU 27 42 42 GLU GLU A . n C 3 28 GLY 28 43 43 GLY GLY A . n C 3 29 CYS 29 44 44 CYS CYS A . n C 3 30 LYS 30 45 45 LYS LYS A . n C 3 31 GLY 31 46 46 GLY GLY A . n C 3 32 PHE 32 47 47 PHE PHE A . n C 3 33 PHE 33 48 48 PHE PHE A . n C 3 34 ARG 34 49 49 ARG ARG A . n C 3 35 ARG 35 50 50 ARG ARG A . n C 3 36 SER 36 51 51 SER SER A . n C 3 37 MET 37 52 52 MET MET A . n C 3 38 LYS 38 53 53 LYS LYS A . n C 3 39 ARG 39 54 54 ARG ARG A . n C 3 40 LYS 40 55 55 LYS LYS A . n C 3 41 ALA 41 56 56 ALA ALA A . n C 3 42 LEU 42 57 57 LEU LEU A . n C 3 43 PHE 43 58 58 PHE PHE A . n C 3 44 THR 44 59 59 THR THR A . n C 3 45 CYS 45 60 60 CYS CYS A . n C 3 46 ALA 46 61 61 ALA ALA A . n C 3 47 ALA 47 62 62 ALA ALA A . n C 3 48 ASN 48 63 63 ASN ASN A . n C 3 49 GLY 49 64 64 GLY GLY A . n C 3 50 ASP 50 65 65 ASP ASP A . n C 3 51 CYS 51 66 66 CYS CYS A . n C 3 52 ARG 52 67 67 ARG ARG A . n C 3 53 ILE 53 68 68 ILE ILE A . n C 3 54 THR 54 69 69 THR THR A . n C 3 55 LYS 55 70 70 LYS LYS A . n C 3 56 ASP 56 71 71 ASP ASP A . n C 3 57 ASN 57 72 72 ASN ASN A . n C 3 58 ARG 58 73 73 ARG ARG A . n C 3 59 ARG 59 74 74 ARG ARG A . n C 3 60 ALA 60 75 75 ALA ALA A . n C 3 61 CYS 61 76 76 CYS CYS A . n C 3 62 GLN 62 77 77 GLN GLN A . n C 3 63 ALA 63 78 78 ALA ALA A . n C 3 64 CYS 64 79 79 CYS CYS A . n C 3 65 ARG 65 80 80 ARG ARG A . n C 3 66 LEU 66 81 81 LEU LEU A . n C 3 67 LYS 67 82 82 LYS LYS A . n C 3 68 ARG 68 83 83 ARG ARG A . n C 3 69 CYS 69 84 84 CYS CYS A . n C 3 70 VAL 70 85 85 VAL VAL A . n C 3 71 ASP 71 86 86 ASP ASP A . n C 3 72 ILE 72 87 87 ILE ILE A . n C 3 73 GLY 73 88 88 GLY GLY A . n C 3 74 MET 74 89 89 MET MET A . n C 3 75 MET 75 90 90 MET MET A . n C 3 76 LYS 76 91 91 LYS LYS A . n C 3 77 GLU 77 92 92 GLU GLU A . n C 3 78 PHE 78 93 93 PHE PHE A . n C 3 79 ILE 79 94 94 ILE ILE A . n C 3 80 LEU 80 95 95 LEU LEU A . n C 3 81 THR 81 96 96 THR THR A . n C 3 82 ASP 82 97 97 ASP ASP A . n C 3 83 GLU 83 98 98 GLU GLU A . n C 3 84 GLU 84 99 99 GLU GLU A . n C 3 85 VAL 85 100 100 VAL VAL A . n C 3 86 GLN 86 101 101 GLN GLN A . n C 3 87 ARG 87 102 102 ARG ARG A . n C 3 88 LYS 88 103 103 LYS LYS A . n C 3 89 ARG 89 104 104 ARG ARG A . n C 3 90 GLU 90 105 105 GLU GLU A . n C 3 91 MET 91 106 106 MET MET A . n C 3 92 ILE 92 107 107 ILE ILE A . n C 3 93 LEU 93 108 108 LEU LEU A . n C 3 94 LYS 94 109 109 LYS LYS A . n C 3 95 ARG 95 110 110 ARG ARG A . n C 3 96 LYS 96 111 111 LYS LYS A . n C 3 97 GLU 97 112 112 GLU GLU A . n C 3 98 GLU 98 113 113 GLU GLU A . n C 3 99 GLU 99 114 ? ? ? A . n C 3 100 ALA 100 115 ? ? ? A . n C 3 101 LEU 101 116 ? ? ? A . n C 3 102 LYS 102 117 ? ? ? A . n C 3 103 ASP 103 118 ? ? ? A . n C 3 104 SER 104 119 ? ? ? A . n C 3 105 LEU 105 120 ? ? ? A . n C 3 106 ARG 106 121 ? ? ? A . n C 3 107 PRO 107 122 ? ? ? A . n C 3 108 LYS 108 123 ? ? ? A . n C 3 109 LEU 109 124 ? ? ? A . n C 3 110 SER 110 125 ? ? ? A . n D 4 1 PHE 1 230 ? ? ? B . n D 4 2 THR 2 231 ? ? ? B . n D 4 3 LYS 3 232 ? ? ? B . n D 4 4 HIS 4 233 ? ? ? B . n D 4 5 ILE 5 234 234 ILE ILE B . n D 4 6 CYS 6 235 235 CYS CYS B . n D 4 7 ALA 7 236 236 ALA ALA B . n D 4 8 ILE 8 237 237 ILE ILE B . n D 4 9 CYS 9 238 238 CYS CYS B . n D 4 10 GLY 10 239 239 GLY GLY B . n D 4 11 ASP 11 240 240 ASP ASP B . n D 4 12 ARG 12 241 241 ARG ARG B . n D 4 13 SER 13 242 242 SER SER B . n D 4 14 SER 14 243 243 SER SER B . n D 4 15 GLY 15 244 244 GLY GLY B . n D 4 16 LYS 16 245 245 LYS LYS B . n D 4 17 HIS 17 246 246 HIS HIS B . n D 4 18 TYR 18 247 247 TYR TYR B . n D 4 19 GLY 19 248 248 GLY GLY B . n D 4 20 VAL 20 249 249 VAL VAL B . n D 4 21 TYR 21 250 250 TYR TYR B . n D 4 22 SER 22 251 251 SER SER B . n D 4 23 CYS 23 252 252 CYS CYS B . n D 4 24 GLU 24 253 253 GLU GLU B . n D 4 25 GLY 25 254 254 GLY GLY B . n D 4 26 CYS 26 255 255 CYS CYS B . n D 4 27 LYS 27 256 256 LYS LYS B . n D 4 28 GLY 28 257 257 GLY GLY B . n D 4 29 PHE 29 258 258 PHE PHE B . n D 4 30 PHE 30 259 259 PHE PHE B . n D 4 31 LYS 31 260 260 LYS LYS B . n D 4 32 ARG 32 261 261 ARG ARG B . n D 4 33 THR 33 262 262 THR THR B . n D 4 34 VAL 34 263 263 VAL VAL B . n D 4 35 ARG 35 264 264 ARG ARG B . n D 4 36 LYS 36 265 265 LYS LYS B . n D 4 37 ASP 37 266 266 ASP ASP B . n D 4 38 LEU 38 267 267 LEU LEU B . n D 4 39 THR 39 268 268 THR THR B . n D 4 40 TYR 40 269 269 TYR TYR B . n D 4 41 THR 41 270 270 THR THR B . n D 4 42 CYS 42 271 271 CYS CYS B . n D 4 43 ARG 43 272 272 ARG ARG B . n D 4 44 ASP 44 273 273 ASP ASP B . n D 4 45 ASN 45 274 274 ASN ASN B . n D 4 46 LYS 46 275 275 LYS LYS B . n D 4 47 ASP 47 276 276 ASP ASP B . n D 4 48 CYS 48 277 277 CYS CYS B . n D 4 49 LEU 49 278 278 LEU LEU B . n D 4 50 ILE 50 279 279 ILE ILE B . n D 4 51 ASP 51 280 280 ASP ASP B . n D 4 52 LYS 52 281 281 LYS LYS B . n D 4 53 ARG 53 282 282 ARG ARG B . n D 4 54 GLN 54 283 283 GLN GLN B . n D 4 55 ARG 55 284 284 ARG ARG B . n D 4 56 ASN 56 285 285 ASN ASN B . n D 4 57 ARG 57 286 286 ARG ARG B . n D 4 58 CYS 58 287 287 CYS CYS B . n D 4 59 GLN 59 288 288 GLN GLN B . n D 4 60 TYR 60 289 289 TYR TYR B . n D 4 61 CYS 61 290 290 CYS CYS B . n D 4 62 ARG 62 291 291 ARG ARG B . n D 4 63 TYR 63 292 292 TYR TYR B . n D 4 64 GLN 64 293 293 GLN GLN B . n D 4 65 LYS 65 294 294 LYS LYS B . n D 4 66 CYS 66 295 295 CYS CYS B . n D 4 67 LEU 67 296 296 LEU LEU B . n D 4 68 ALA 68 297 297 ALA ALA B . n D 4 69 MET 69 298 298 MET MET B . n D 4 70 GLY 70 299 299 GLY GLY B . n D 4 71 MET 71 300 300 MET MET B . n D 4 72 LYS 72 301 301 LYS LYS B . n D 4 73 ARG 73 302 302 ARG ARG B . n D 4 74 GLU 74 303 303 GLU GLU B . n D 4 75 ALA 75 304 304 ALA ALA B . n D 4 76 VAL 76 305 305 VAL VAL B . n D 4 77 GLN 77 306 306 GLN GLN B . n D 4 78 GLU 78 307 ? ? ? B . n D 4 79 GLU 79 308 ? ? ? B . n D 4 80 ARG 80 309 ? ? ? B . n D 4 81 GLN 81 310 ? ? ? B . n D 4 82 ARG 82 311 ? ? ? B . n D 4 83 GLY 83 312 ? ? ? B . n D 4 84 LYS 84 313 ? ? ? B . n D 4 85 ASP 85 314 ? ? ? B . n D 4 86 ARG 86 315 ? ? ? B . n D 4 87 ASN 87 316 ? ? ? B . n D 4 88 GLU 88 317 ? ? ? B . n D 4 89 ASN 89 318 ? ? ? B . n D 4 90 GLU 90 319 ? ? ? B . n D 4 91 VAL 91 320 ? ? ? B . n D 4 92 GLU 92 321 ? ? ? B . n D 4 93 SER 93 322 ? ? ? B . n D 4 94 THR 94 323 ? ? ? B . n D 4 95 SER 95 324 ? ? ? B . n D 4 96 SER 96 325 ? ? ? B . n D 4 97 ALA 97 326 ? ? ? B . n D 4 98 ASN 98 327 ? ? ? B . n D 4 99 GLU 99 328 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 ZN 1 150 150 ZN ZN A . F 5 ZN 1 151 151 ZN ZN A . G 5 ZN 1 350 350 ZN ZN B . H 5 ZN 1 351 351 ZN ZN B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? C CYS 9 ? A CYS 24 ? 1_555 ZN ? E ZN . ? A ZN 150 ? 1_555 SG ? C CYS 12 ? A CYS 27 ? 1_555 106.1 ? 2 SG ? C CYS 9 ? A CYS 24 ? 1_555 ZN ? E ZN . ? A ZN 150 ? 1_555 SG ? C CYS 26 ? A CYS 41 ? 1_555 136.8 ? 3 SG ? C CYS 12 ? A CYS 27 ? 1_555 ZN ? E ZN . ? A ZN 150 ? 1_555 SG ? C CYS 26 ? A CYS 41 ? 1_555 95.0 ? 4 SG ? C CYS 9 ? A CYS 24 ? 1_555 ZN ? E ZN . ? A ZN 150 ? 1_555 SG ? C CYS 29 ? A CYS 44 ? 1_555 122.5 ? 5 SG ? C CYS 12 ? A CYS 27 ? 1_555 ZN ? E ZN . ? A ZN 150 ? 1_555 SG ? C CYS 29 ? A CYS 44 ? 1_555 102.0 ? 6 SG ? C CYS 26 ? A CYS 41 ? 1_555 ZN ? E ZN . ? A ZN 150 ? 1_555 SG ? C CYS 29 ? A CYS 44 ? 1_555 87.8 ? 7 SG ? C CYS 45 ? A CYS 60 ? 1_555 ZN ? F ZN . ? A ZN 151 ? 1_555 SG ? C CYS 51 ? A CYS 66 ? 1_555 129.8 ? 8 SG ? C CYS 45 ? A CYS 60 ? 1_555 ZN ? F ZN . ? A ZN 151 ? 1_555 SG ? C CYS 61 ? A CYS 76 ? 1_555 105.7 ? 9 SG ? C CYS 51 ? A CYS 66 ? 1_555 ZN ? F ZN . ? A ZN 151 ? 1_555 SG ? C CYS 61 ? A CYS 76 ? 1_555 89.3 ? 10 SG ? C CYS 45 ? A CYS 60 ? 1_555 ZN ? F ZN . ? A ZN 151 ? 1_555 SG ? C CYS 64 ? A CYS 79 ? 1_555 118.7 ? 11 SG ? C CYS 51 ? A CYS 66 ? 1_555 ZN ? F ZN . ? A ZN 151 ? 1_555 SG ? C CYS 64 ? A CYS 79 ? 1_555 92.4 ? 12 SG ? C CYS 61 ? A CYS 76 ? 1_555 ZN ? F ZN . ? A ZN 151 ? 1_555 SG ? C CYS 64 ? A CYS 79 ? 1_555 118.7 ? 13 SG ? D CYS 6 ? B CYS 235 ? 1_555 ZN ? G ZN . ? B ZN 350 ? 1_555 SG ? D CYS 9 ? B CYS 238 ? 1_555 133.2 ? 14 SG ? D CYS 6 ? B CYS 235 ? 1_555 ZN ? G ZN . ? B ZN 350 ? 1_555 SG ? D CYS 23 ? B CYS 252 ? 1_555 117.0 ? 15 SG ? D CYS 9 ? B CYS 238 ? 1_555 ZN ? G ZN . ? B ZN 350 ? 1_555 SG ? D CYS 23 ? B CYS 252 ? 1_555 83.0 ? 16 SG ? D CYS 6 ? B CYS 235 ? 1_555 ZN ? G ZN . ? B ZN 350 ? 1_555 SG ? D CYS 26 ? B CYS 255 ? 1_555 112.9 ? 17 SG ? D CYS 9 ? B CYS 238 ? 1_555 ZN ? G ZN . ? B ZN 350 ? 1_555 SG ? D CYS 26 ? B CYS 255 ? 1_555 109.7 ? 18 SG ? D CYS 23 ? B CYS 252 ? 1_555 ZN ? G ZN . ? B ZN 350 ? 1_555 SG ? D CYS 26 ? B CYS 255 ? 1_555 87.4 ? 19 SG ? D CYS 42 ? B CYS 271 ? 1_555 ZN ? H ZN . ? B ZN 351 ? 1_555 SG ? D CYS 48 ? B CYS 277 ? 1_555 99.0 ? 20 SG ? D CYS 42 ? B CYS 271 ? 1_555 ZN ? H ZN . ? B ZN 351 ? 1_555 SG ? D CYS 58 ? B CYS 287 ? 1_555 113.9 ? 21 SG ? D CYS 48 ? B CYS 277 ? 1_555 ZN ? H ZN . ? B ZN 351 ? 1_555 SG ? D CYS 58 ? B CYS 287 ? 1_555 130.8 ? 22 SG ? D CYS 42 ? B CYS 271 ? 1_555 ZN ? H ZN . ? B ZN 351 ? 1_555 SG ? D CYS 61 ? B CYS 290 ? 1_555 70.4 ? 23 SG ? D CYS 48 ? B CYS 277 ? 1_555 ZN ? H ZN . ? B ZN 351 ? 1_555 SG ? D CYS 61 ? B CYS 290 ? 1_555 70.7 ? 24 SG ? D CYS 58 ? B CYS 287 ? 1_555 ZN ? H ZN . ? B ZN 351 ? 1_555 SG ? D CYS 61 ? B CYS 290 ? 1_555 86.6 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-02-15 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2011-10-26 5 'Structure model' 1 4 2021-10-20 6 'Structure model' 1 5 2023-08-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Structure summary' 4 5 'Structure model' 'Database references' 5 5 'Structure model' 'Derived calculations' 6 6 'Structure model' 'Data collection' 7 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' database_2 2 5 'Structure model' pdbx_struct_conn_angle 3 5 'Structure model' struct_conn 4 5 'Structure model' struct_ref_seq_dif 5 5 'Structure model' struct_site 6 6 'Structure model' chem_comp_atom 7 6 'Structure model' chem_comp_bond 8 6 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 4 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 5 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 6 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 7 5 'Structure model' '_pdbx_struct_conn_angle.value' 8 5 'Structure model' '_struct_conn.pdbx_dist_value' 9 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 10 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 11 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 12 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 13 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 14 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 15 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 16 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 17 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 18 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 19 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 20 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 21 5 'Structure model' '_struct_ref_seq_dif.details' 22 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 23 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 24 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 HKL-2000 'data reduction' . ? 2 CNS refinement . ? 3 HKL-2000 'data scaling' . ? 4 CNS phasing . ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 19 ? ? 81.50 2.03 2 1 PRO A 21 ? ? -30.06 124.65 3 1 ARG A 22 ? ? -70.74 43.28 4 1 VAL A 26 ? ? -97.77 -64.42 5 1 ASP A 29 ? ? -58.21 179.49 6 1 PHE A 36 ? ? 26.73 50.83 7 1 ALA A 62 ? ? -52.78 -156.39 8 1 ASN A 63 ? ? -99.41 46.71 9 1 ASP A 65 ? ? -169.81 36.71 10 1 ARG A 73 ? ? -14.24 -73.15 11 1 ARG A 74 ? ? -43.28 -10.51 12 1 GLU A 98 ? ? -47.15 -77.96 13 1 GLU A 99 ? ? -27.31 -56.06 14 1 ARG A 102 ? ? -41.46 -71.00 15 1 ARG A 110 ? ? -76.00 34.68 16 1 GLU A 112 ? ? -43.00 98.78 17 1 ILE B 237 ? ? -99.30 -72.41 18 1 ASP B 240 ? ? -34.71 165.30 19 1 TYR B 247 ? ? 27.26 43.02 20 1 SER B 251 ? ? -172.36 148.77 21 1 LYS B 260 ? ? -74.66 -70.09 22 1 ASP B 273 ? ? -139.24 -122.10 23 1 ASP B 276 ? ? -155.20 26.38 24 1 GLN B 283 ? ? -112.26 61.66 25 1 ARG B 291 ? ? -63.86 -75.23 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DT C 401 ? ? 0.068 'SIDE CHAIN' 2 1 DA C 412 ? ? 0.061 'SIDE CHAIN' 3 1 DT D 419 ? ? 0.107 'SIDE CHAIN' 4 1 DA D 423 ? ? 0.084 'SIDE CHAIN' 5 1 DC D 425 ? ? 0.064 'SIDE CHAIN' 6 1 DT D 430 ? ? 0.072 'SIDE CHAIN' 7 1 DA D 436 ? ? 0.057 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 98 ? CG ? C GLU 83 CG 2 1 Y 1 A GLU 98 ? CD ? C GLU 83 CD 3 1 Y 1 A GLU 98 ? OE1 ? C GLU 83 OE1 4 1 Y 1 A GLU 98 ? OE2 ? C GLU 83 OE2 5 1 Y 1 A GLN 101 ? CG ? C GLN 86 CG 6 1 Y 1 A GLN 101 ? CD ? C GLN 86 CD 7 1 Y 1 A GLN 101 ? OE1 ? C GLN 86 OE1 8 1 Y 1 A GLN 101 ? NE2 ? C GLN 86 NE2 9 1 Y 1 B LYS 245 ? CG ? D LYS 16 CG 10 1 Y 1 B LYS 245 ? CD ? D LYS 16 CD 11 1 Y 1 B LYS 245 ? CE ? D LYS 16 CE 12 1 Y 1 B LYS 245 ? NZ ? D LYS 16 NZ 13 1 Y 1 B ARG 282 ? CG ? D ARG 53 CG 14 1 Y 1 B ARG 282 ? CD ? D ARG 53 CD 15 1 Y 1 B ARG 282 ? NE ? D ARG 53 NE 16 1 Y 1 B ARG 282 ? CZ ? D ARG 53 CZ 17 1 Y 1 B ARG 282 ? NH1 ? D ARG 53 NH1 18 1 Y 1 B ARG 282 ? NH2 ? D ARG 53 NH2 19 1 Y 1 B ARG 286 ? CG ? D ARG 57 CG 20 1 Y 1 B ARG 286 ? CD ? D ARG 57 CD 21 1 Y 1 B ARG 286 ? NE ? D ARG 57 NE 22 1 Y 1 B ARG 286 ? CZ ? D ARG 57 CZ 23 1 Y 1 B ARG 286 ? NH1 ? D ARG 57 NH1 24 1 Y 1 B ARG 286 ? NH2 ? D ARG 57 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A PHE 16 ? C PHE 1 2 1 Y 1 A ASP 17 ? C ASP 2 3 1 Y 1 A GLU 114 ? C GLU 99 4 1 Y 1 A ALA 115 ? C ALA 100 5 1 Y 1 A LEU 116 ? C LEU 101 6 1 Y 1 A LYS 117 ? C LYS 102 7 1 Y 1 A ASP 118 ? C ASP 103 8 1 Y 1 A SER 119 ? C SER 104 9 1 Y 1 A LEU 120 ? C LEU 105 10 1 Y 1 A ARG 121 ? C ARG 106 11 1 Y 1 A PRO 122 ? C PRO 107 12 1 Y 1 A LYS 123 ? C LYS 108 13 1 Y 1 A LEU 124 ? C LEU 109 14 1 Y 1 A SER 125 ? C SER 110 15 1 Y 1 B PHE 230 ? D PHE 1 16 1 Y 1 B THR 231 ? D THR 2 17 1 Y 1 B LYS 232 ? D LYS 3 18 1 Y 1 B HIS 233 ? D HIS 4 19 1 Y 1 B GLU 307 ? D GLU 78 20 1 Y 1 B GLU 308 ? D GLU 79 21 1 Y 1 B ARG 309 ? D ARG 80 22 1 Y 1 B GLN 310 ? D GLN 81 23 1 Y 1 B ARG 311 ? D ARG 82 24 1 Y 1 B GLY 312 ? D GLY 83 25 1 Y 1 B LYS 313 ? D LYS 84 26 1 Y 1 B ASP 314 ? D ASP 85 27 1 Y 1 B ARG 315 ? D ARG 86 28 1 Y 1 B ASN 316 ? D ASN 87 29 1 Y 1 B GLU 317 ? D GLU 88 30 1 Y 1 B ASN 318 ? D ASN 89 31 1 Y 1 B GLU 319 ? D GLU 90 32 1 Y 1 B VAL 320 ? D VAL 91 33 1 Y 1 B GLU 321 ? D GLU 92 34 1 Y 1 B SER 322 ? D SER 93 35 1 Y 1 B THR 323 ? D THR 94 36 1 Y 1 B SER 324 ? D SER 95 37 1 Y 1 B SER 325 ? D SER 96 38 1 Y 1 B ALA 326 ? D ALA 97 39 1 Y 1 B ASN 327 ? D ASN 98 40 1 Y 1 B GLU 328 ? D GLU 99 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HIS N N N N 280 HIS CA C N S 281 HIS C C N N 282 HIS O O N N 283 HIS CB C N N 284 HIS CG C Y N 285 HIS ND1 N Y N 286 HIS CD2 C Y N 287 HIS CE1 C Y N 288 HIS NE2 N Y N 289 HIS OXT O N N 290 HIS H H N N 291 HIS H2 H N N 292 HIS HA H N N 293 HIS HB2 H N N 294 HIS HB3 H N N 295 HIS HD1 H N N 296 HIS HD2 H N N 297 HIS HE1 H N N 298 HIS HE2 H N N 299 HIS HXT H N N 300 ILE N N N N 301 ILE CA C N S 302 ILE C C N N 303 ILE O O N N 304 ILE CB C N S 305 ILE CG1 C N N 306 ILE CG2 C N N 307 ILE CD1 C N N 308 ILE OXT O N N 309 ILE H H N N 310 ILE H2 H N N 311 ILE HA H N N 312 ILE HB H N N 313 ILE HG12 H N N 314 ILE HG13 H N N 315 ILE HG21 H N N 316 ILE HG22 H N N 317 ILE HG23 H N N 318 ILE HD11 H N N 319 ILE HD12 H N N 320 ILE HD13 H N N 321 ILE HXT H N N 322 LEU N N N N 323 LEU CA C N S 324 LEU C C N N 325 LEU O O N N 326 LEU CB C N N 327 LEU CG C N N 328 LEU CD1 C N N 329 LEU CD2 C N N 330 LEU OXT O N N 331 LEU H H N N 332 LEU H2 H N N 333 LEU HA H N N 334 LEU HB2 H N N 335 LEU HB3 H N N 336 LEU HG H N N 337 LEU HD11 H N N 338 LEU HD12 H N N 339 LEU HD13 H N N 340 LEU HD21 H N N 341 LEU HD22 H N N 342 LEU HD23 H N N 343 LEU HXT H N N 344 LYS N N N N 345 LYS CA C N S 346 LYS C C N N 347 LYS O O N N 348 LYS CB C N N 349 LYS CG C N N 350 LYS CD C N N 351 LYS CE C N N 352 LYS NZ N N N 353 LYS OXT O N N 354 LYS H H N N 355 LYS H2 H N N 356 LYS HA H N N 357 LYS HB2 H N N 358 LYS HB3 H N N 359 LYS HG2 H N N 360 LYS HG3 H N N 361 LYS HD2 H N N 362 LYS HD3 H N N 363 LYS HE2 H N N 364 LYS HE3 H N N 365 LYS HZ1 H N N 366 LYS HZ2 H N N 367 LYS HZ3 H N N 368 LYS HXT H N N 369 MET N N N N 370 MET CA C N S 371 MET C C N N 372 MET O O N N 373 MET CB C N N 374 MET CG C N N 375 MET SD S N N 376 MET CE C N N 377 MET OXT O N N 378 MET H H N N 379 MET H2 H N N 380 MET HA H N N 381 MET HB2 H N N 382 MET HB3 H N N 383 MET HG2 H N N 384 MET HG3 H N N 385 MET HE1 H N N 386 MET HE2 H N N 387 MET HE3 H N N 388 MET HXT H N N 389 PHE N N N N 390 PHE CA C N S 391 PHE C C N N 392 PHE O O N N 393 PHE CB C N N 394 PHE CG C Y N 395 PHE CD1 C Y N 396 PHE CD2 C Y N 397 PHE CE1 C Y N 398 PHE CE2 C Y N 399 PHE CZ C Y N 400 PHE OXT O N N 401 PHE H H N N 402 PHE H2 H N N 403 PHE HA H N N 404 PHE HB2 H N N 405 PHE HB3 H N N 406 PHE HD1 H N N 407 PHE HD2 H N N 408 PHE HE1 H N N 409 PHE HE2 H N N 410 PHE HZ H N N 411 PHE HXT H N N 412 PRO N N N N 413 PRO CA C N S 414 PRO C C N N 415 PRO O O N N 416 PRO CB C N N 417 PRO CG C N N 418 PRO CD C N N 419 PRO OXT O N N 420 PRO H H N N 421 PRO HA H N N 422 PRO HB2 H N N 423 PRO HB3 H N N 424 PRO HG2 H N N 425 PRO HG3 H N N 426 PRO HD2 H N N 427 PRO HD3 H N N 428 PRO HXT H N N 429 SER N N N N 430 SER CA C N S 431 SER C C N N 432 SER O O N N 433 SER CB C N N 434 SER OG O N N 435 SER OXT O N N 436 SER H H N N 437 SER H2 H N N 438 SER HA H N N 439 SER HB2 H N N 440 SER HB3 H N N 441 SER HG H N N 442 SER HXT H N N 443 THR N N N N 444 THR CA C N S 445 THR C C N N 446 THR O O N N 447 THR CB C N R 448 THR OG1 O N N 449 THR CG2 C N N 450 THR OXT O N N 451 THR H H N N 452 THR H2 H N N 453 THR HA H N N 454 THR HB H N N 455 THR HG1 H N N 456 THR HG21 H N N 457 THR HG22 H N N 458 THR HG23 H N N 459 THR HXT H N N 460 TYR N N N N 461 TYR CA C N S 462 TYR C C N N 463 TYR O O N N 464 TYR CB C N N 465 TYR CG C Y N 466 TYR CD1 C Y N 467 TYR CD2 C Y N 468 TYR CE1 C Y N 469 TYR CE2 C Y N 470 TYR CZ C Y N 471 TYR OH O N N 472 TYR OXT O N N 473 TYR H H N N 474 TYR H2 H N N 475 TYR HA H N N 476 TYR HB2 H N N 477 TYR HB3 H N N 478 TYR HD1 H N N 479 TYR HD2 H N N 480 TYR HE1 H N N 481 TYR HE2 H N N 482 TYR HH H N N 483 TYR HXT H N N 484 VAL N N N N 485 VAL CA C N S 486 VAL C C N N 487 VAL O O N N 488 VAL CB C N N 489 VAL CG1 C N N 490 VAL CG2 C N N 491 VAL OXT O N N 492 VAL H H N N 493 VAL H2 H N N 494 VAL HA H N N 495 VAL HB H N N 496 VAL HG11 H N N 497 VAL HG12 H N N 498 VAL HG13 H N N 499 VAL HG21 H N N 500 VAL HG22 H N N 501 VAL HG23 H N N 502 VAL HXT H N N 503 ZN ZN ZN N N 504 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 ILE N CA sing N N 299 ILE N H sing N N 300 ILE N H2 sing N N 301 ILE CA C sing N N 302 ILE CA CB sing N N 303 ILE CA HA sing N N 304 ILE C O doub N N 305 ILE C OXT sing N N 306 ILE CB CG1 sing N N 307 ILE CB CG2 sing N N 308 ILE CB HB sing N N 309 ILE CG1 CD1 sing N N 310 ILE CG1 HG12 sing N N 311 ILE CG1 HG13 sing N N 312 ILE CG2 HG21 sing N N 313 ILE CG2 HG22 sing N N 314 ILE CG2 HG23 sing N N 315 ILE CD1 HD11 sing N N 316 ILE CD1 HD12 sing N N 317 ILE CD1 HD13 sing N N 318 ILE OXT HXT sing N N 319 LEU N CA sing N N 320 LEU N H sing N N 321 LEU N H2 sing N N 322 LEU CA C sing N N 323 LEU CA CB sing N N 324 LEU CA HA sing N N 325 LEU C O doub N N 326 LEU C OXT sing N N 327 LEU CB CG sing N N 328 LEU CB HB2 sing N N 329 LEU CB HB3 sing N N 330 LEU CG CD1 sing N N 331 LEU CG CD2 sing N N 332 LEU CG HG sing N N 333 LEU CD1 HD11 sing N N 334 LEU CD1 HD12 sing N N 335 LEU CD1 HD13 sing N N 336 LEU CD2 HD21 sing N N 337 LEU CD2 HD22 sing N N 338 LEU CD2 HD23 sing N N 339 LEU OXT HXT sing N N 340 LYS N CA sing N N 341 LYS N H sing N N 342 LYS N H2 sing N N 343 LYS CA C sing N N 344 LYS CA CB sing N N 345 LYS CA HA sing N N 346 LYS C O doub N N 347 LYS C OXT sing N N 348 LYS CB CG sing N N 349 LYS CB HB2 sing N N 350 LYS CB HB3 sing N N 351 LYS CG CD sing N N 352 LYS CG HG2 sing N N 353 LYS CG HG3 sing N N 354 LYS CD CE sing N N 355 LYS CD HD2 sing N N 356 LYS CD HD3 sing N N 357 LYS CE NZ sing N N 358 LYS CE HE2 sing N N 359 LYS CE HE3 sing N N 360 LYS NZ HZ1 sing N N 361 LYS NZ HZ2 sing N N 362 LYS NZ HZ3 sing N N 363 LYS OXT HXT sing N N 364 MET N CA sing N N 365 MET N H sing N N 366 MET N H2 sing N N 367 MET CA C sing N N 368 MET CA CB sing N N 369 MET CA HA sing N N 370 MET C O doub N N 371 MET C OXT sing N N 372 MET CB CG sing N N 373 MET CB HB2 sing N N 374 MET CB HB3 sing N N 375 MET CG SD sing N N 376 MET CG HG2 sing N N 377 MET CG HG3 sing N N 378 MET SD CE sing N N 379 MET CE HE1 sing N N 380 MET CE HE2 sing N N 381 MET CE HE3 sing N N 382 MET OXT HXT sing N N 383 PHE N CA sing N N 384 PHE N H sing N N 385 PHE N H2 sing N N 386 PHE CA C sing N N 387 PHE CA CB sing N N 388 PHE CA HA sing N N 389 PHE C O doub N N 390 PHE C OXT sing N N 391 PHE CB CG sing N N 392 PHE CB HB2 sing N N 393 PHE CB HB3 sing N N 394 PHE CG CD1 doub Y N 395 PHE CG CD2 sing Y N 396 PHE CD1 CE1 sing Y N 397 PHE CD1 HD1 sing N N 398 PHE CD2 CE2 doub Y N 399 PHE CD2 HD2 sing N N 400 PHE CE1 CZ doub Y N 401 PHE CE1 HE1 sing N N 402 PHE CE2 CZ sing Y N 403 PHE CE2 HE2 sing N N 404 PHE CZ HZ sing N N 405 PHE OXT HXT sing N N 406 PRO N CA sing N N 407 PRO N CD sing N N 408 PRO N H sing N N 409 PRO CA C sing N N 410 PRO CA CB sing N N 411 PRO CA HA sing N N 412 PRO C O doub N N 413 PRO C OXT sing N N 414 PRO CB CG sing N N 415 PRO CB HB2 sing N N 416 PRO CB HB3 sing N N 417 PRO CG CD sing N N 418 PRO CG HG2 sing N N 419 PRO CG HG3 sing N N 420 PRO CD HD2 sing N N 421 PRO CD HD3 sing N N 422 PRO OXT HXT sing N N 423 SER N CA sing N N 424 SER N H sing N N 425 SER N H2 sing N N 426 SER CA C sing N N 427 SER CA CB sing N N 428 SER CA HA sing N N 429 SER C O doub N N 430 SER C OXT sing N N 431 SER CB OG sing N N 432 SER CB HB2 sing N N 433 SER CB HB3 sing N N 434 SER OG HG sing N N 435 SER OXT HXT sing N N 436 THR N CA sing N N 437 THR N H sing N N 438 THR N H2 sing N N 439 THR CA C sing N N 440 THR CA CB sing N N 441 THR CA HA sing N N 442 THR C O doub N N 443 THR C OXT sing N N 444 THR CB OG1 sing N N 445 THR CB CG2 sing N N 446 THR CB HB sing N N 447 THR OG1 HG1 sing N N 448 THR CG2 HG21 sing N N 449 THR CG2 HG22 sing N N 450 THR CG2 HG23 sing N N 451 THR OXT HXT sing N N 452 TYR N CA sing N N 453 TYR N H sing N N 454 TYR N H2 sing N N 455 TYR CA C sing N N 456 TYR CA CB sing N N 457 TYR CA HA sing N N 458 TYR C O doub N N 459 TYR C OXT sing N N 460 TYR CB CG sing N N 461 TYR CB HB2 sing N N 462 TYR CB HB3 sing N N 463 TYR CG CD1 doub Y N 464 TYR CG CD2 sing Y N 465 TYR CD1 CE1 sing Y N 466 TYR CD1 HD1 sing N N 467 TYR CD2 CE2 doub Y N 468 TYR CD2 HD2 sing N N 469 TYR CE1 CZ doub Y N 470 TYR CE1 HE1 sing N N 471 TYR CE2 CZ sing Y N 472 TYR CE2 HE2 sing N N 473 TYR CZ OH sing N N 474 TYR OH HH sing N N 475 TYR OXT HXT sing N N 476 VAL N CA sing N N 477 VAL N H sing N N 478 VAL N H2 sing N N 479 VAL CA C sing N N 480 VAL CA CB sing N N 481 VAL CA HA sing N N 482 VAL C O doub N N 483 VAL C OXT sing N N 484 VAL CB CG1 sing N N 485 VAL CB CG2 sing N N 486 VAL CB HB sing N N 487 VAL CG1 HG11 sing N N 488 VAL CG1 HG12 sing N N 489 VAL CG1 HG13 sing N N 490 VAL CG2 HG21 sing N N 491 VAL CG2 HG22 sing N N 492 VAL CG2 HG23 sing N N 493 VAL OXT HXT sing N N 494 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1YNW 'double helix' 1YNW 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DT 2 1_555 B DA 18 1_555 -0.305 -0.546 0.959 -17.903 4.139 6.012 1 C_DT402:DA436_D C 402 ? D 436 ? 20 1 1 A DA 3 1_555 B DT 17 1_555 -0.011 -0.177 0.488 -19.251 0.970 -0.460 2 C_DA403:DT435_D C 403 ? D 435 ? 20 1 1 A DG 4 1_555 B DC 16 1_555 0.107 -0.165 -0.040 -10.497 -3.536 -3.922 3 C_DG404:DC434_D C 404 ? D 434 ? 19 1 1 A DG 5 1_555 B DC 15 1_555 -0.384 -0.199 -0.370 -6.972 2.124 1.980 4 C_DG405:DC433_D C 405 ? D 433 ? 19 1 1 A DT 6 1_555 B DA 14 1_555 0.696 -0.150 -0.192 -0.503 -13.247 11.422 5 C_DT406:DA432_D C 406 ? D 432 ? 20 1 1 A DC 7 1_555 B DG 13 1_555 0.669 -0.522 -0.747 12.926 -3.372 1.011 6 C_DC407:DG431_D C 407 ? D 431 ? 19 1 1 A DA 8 1_555 B DT 12 1_555 0.472 -0.256 0.328 16.424 -8.830 -1.793 7 C_DA408:DT430_D C 408 ? D 430 ? 20 1 1 A DC 9 1_555 B DG 11 1_555 0.415 -0.321 -0.067 10.826 -8.955 -1.950 8 C_DC409:DG429_D C 409 ? D 429 ? 19 1 1 A DG 10 1_555 B DC 10 1_555 -0.673 -0.485 -0.110 -3.498 -2.910 -0.145 9 C_DG410:DC428_D C 410 ? D 428 ? 19 1 1 A DA 11 1_555 B DT 9 1_555 0.739 -0.231 -0.320 5.061 -5.374 -1.394 10 C_DA411:DT427_D C 411 ? D 427 ? 20 1 1 A DA 12 1_555 B DT 8 1_555 0.202 -0.338 0.042 -0.853 -2.413 -1.938 11 C_DA412:DT426_D C 412 ? D 426 ? 20 1 1 A DG 13 1_555 B DC 7 1_555 -0.600 -0.542 -0.329 -7.929 -11.745 -0.201 12 C_DG413:DC425_D C 413 ? D 425 ? 19 1 1 A DG 14 1_555 B DC 6 1_555 -1.146 -0.725 -0.524 -17.689 -6.239 -0.860 13 C_DG414:DC424_D C 414 ? D 424 ? 19 1 1 A DT 15 1_555 B DA 5 1_555 -0.159 -0.177 -0.131 -12.194 -4.435 -2.868 14 C_DT415:DA423_D C 415 ? D 423 ? 20 1 1 A DC 16 1_555 B DG 4 1_555 -0.638 -0.372 -0.188 0.363 1.112 -1.055 15 C_DC416:DG422_D C 416 ? D 422 ? 19 1 1 A DA 17 1_555 B DT 3 1_555 -0.284 -0.483 0.037 0.799 -20.043 7.485 16 C_DA417:DT421_D C 417 ? D 421 ? 20 1 1 A DA 18 1_555 B DT 2 1_555 0.505 -0.131 0.614 8.556 -6.034 0.075 17 C_DA418:DT420_D C 418 ? D 420 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DT 2 1_555 B DA 18 1_555 A DA 3 1_555 B DT 17 1_555 -1.636 -0.183 3.250 -1.225 0.284 39.208 -0.306 2.291 3.296 0.423 1.825 39.227 1 CC_DT402DA403:DT435DA436_DD C 402 ? D 436 ? C 403 ? D 435 ? 1 A DA 3 1_555 B DT 17 1_555 A DG 4 1_555 B DC 16 1_555 -0.137 0.045 3.373 2.806 3.377 33.731 -0.478 0.697 3.340 5.790 -4.810 34.007 2 CC_DA403DG404:DC434DT435_DD C 403 ? D 435 ? C 404 ? D 434 ? 1 A DG 4 1_555 B DC 16 1_555 A DG 5 1_555 B DC 15 1_555 -0.402 -0.759 3.263 -1.778 -0.447 30.037 -1.370 0.410 3.292 -0.861 3.426 30.091 3 CC_DG404DG405:DC433DC434_DD C 404 ? D 434 ? C 405 ? D 433 ? 1 A DG 5 1_555 B DC 15 1_555 A DT 6 1_555 B DA 14 1_555 0.239 -0.427 3.131 1.857 2.173 36.033 -0.981 -0.135 3.109 3.506 -2.996 36.143 4 CC_DG405DT406:DA432DC433_DD C 405 ? D 433 ? C 406 ? D 432 ? 1 A DT 6 1_555 B DA 14 1_555 A DC 7 1_555 B DG 13 1_555 1.093 1.469 2.956 10.493 1.820 31.230 2.289 -0.191 3.224 3.264 -18.818 32.953 5 CC_DT406DC407:DG431DA432_DD C 406 ? D 432 ? C 407 ? D 431 ? 1 A DC 7 1_555 B DG 13 1_555 A DA 8 1_555 B DT 12 1_555 -0.354 1.672 3.386 -4.790 4.823 35.571 1.961 -0.156 3.590 7.806 7.754 36.194 6 CC_DC407DA408:DT430DG431_DD C 407 ? D 431 ? C 408 ? D 430 ? 1 A DA 8 1_555 B DT 12 1_555 A DC 9 1_555 B DG 11 1_555 0.340 -1.201 3.357 4.514 3.368 33.535 -2.602 0.151 3.241 5.787 -7.756 33.992 7 CC_DA408DC409:DG429DT430_DD C 408 ? D 430 ? C 409 ? D 429 ? 1 A DC 9 1_555 B DG 11 1_555 A DG 10 1_555 B DC 10 1_555 0.713 0.430 3.703 4.858 8.189 34.719 -0.661 -0.350 3.767 13.413 -7.958 35.962 8 CC_DC409DG410:DC428DG429_DD C 409 ? D 429 ? C 410 ? D 428 ? 1 A DG 10 1_555 B DC 10 1_555 A DA 11 1_555 B DT 9 1_555 -0.424 0.496 3.260 2.255 6.547 33.775 -0.189 1.069 3.261 11.124 -3.831 34.457 9 CC_DG410DA411:DT427DC428_DD C 410 ? D 428 ? C 411 ? D 427 ? 1 A DA 11 1_555 B DT 9 1_555 A DA 12 1_555 B DT 8 1_555 -0.681 -0.539 3.127 -11.398 8.124 35.012 -1.864 -0.387 3.005 12.885 18.078 37.624 10 CC_DA411DA412:DT426DT427_DD C 411 ? D 427 ? C 412 ? D 426 ? 1 A DA 12 1_555 B DT 8 1_555 A DG 13 1_555 B DC 7 1_555 0.151 -1.290 3.613 -1.277 -0.786 31.221 -2.230 -0.548 3.635 -1.460 2.371 31.256 11 CC_DA412DG413:DC425DT426_DD C 412 ? D 426 ? C 413 ? D 425 ? 1 A DG 13 1_555 B DC 7 1_555 A DG 14 1_555 B DC 6 1_555 0.050 -1.052 3.794 2.776 0.780 26.369 -2.531 0.739 3.747 1.703 -6.063 26.524 12 CC_DG413DG414:DC424DC425_DD C 413 ? D 425 ? C 414 ? D 424 ? 1 A DG 14 1_555 B DC 6 1_555 A DT 15 1_555 B DA 5 1_555 -0.772 -0.372 3.341 -1.665 2.564 41.602 -0.798 0.905 3.341 3.604 2.340 41.710 13 CC_DG414DT415:DA423DC424_DD C 414 ? D 424 ? C 415 ? D 423 ? 1 A DT 15 1_555 B DA 5 1_555 A DC 16 1_555 B DG 4 1_555 1.000 0.995 3.180 2.322 2.444 31.645 1.371 -1.401 3.309 4.466 -4.243 31.820 14 CC_DT415DC416:DG422DA423_DD C 415 ? D 423 ? C 416 ? D 422 ? 1 A DC 16 1_555 B DG 4 1_555 A DA 17 1_555 B DT 3 1_555 -0.743 1.683 3.483 -2.381 2.684 36.759 2.262 0.823 3.632 4.244 3.765 36.928 15 CC_DC416DA417:DT421DG422_DD C 416 ? D 422 ? C 417 ? D 421 ? 1 A DA 17 1_555 B DT 3 1_555 A DA 18 1_555 B DT 2 1_555 0.337 -0.122 2.879 -2.552 -6.534 37.076 0.556 -0.813 2.830 -10.163 3.970 37.711 16 CC_DA417DA418:DT420DT421_DD C 417 ? D 421 ? C 418 ? D 420 ? # _pdbx_entity_nonpoly.entity_id 5 _pdbx_entity_nonpoly.name 'ZINC ION' _pdbx_entity_nonpoly.comp_id ZN # loop_ _pdbx_initial_refinement_model.id _pdbx_initial_refinement_model.entity_id_list _pdbx_initial_refinement_model.type _pdbx_initial_refinement_model.source_name _pdbx_initial_refinement_model.accession_code _pdbx_initial_refinement_model.details 1 ? 'experimental model' PDB 1KB4 'PDB ENTRY 1KB4 and 1DSZ' 2 ? 'experimental model' PDB 1DSZ 'PDB ENTRY 1KB4 and 1DSZ' #