data_1YQM # _entry.id 1YQM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1YQM pdb_00001yqm 10.2210/pdb1yqm/pdb NDB PD0631 ? ? RCSB RCSB031816 ? ? WWPDB D_1000031816 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-04-05 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2021-10-20 5 'Structure model' 1 4 2024-02-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' 5 5 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_struct_conn_angle 3 4 'Structure model' struct_conn 4 4 'Structure model' struct_conn_type 5 4 'Structure model' struct_ref_seq_dif 6 4 'Structure model' struct_site 7 5 'Structure model' chem_comp_atom 8 5 'Structure model' chem_comp_bond # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 20 4 'Structure model' '_pdbx_struct_conn_angle.value' 21 4 'Structure model' '_struct_conn.conn_type_id' 22 4 'Structure model' '_struct_conn.id' 23 4 'Structure model' '_struct_conn.pdbx_dist_value' 24 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 25 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 26 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 27 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 28 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 29 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 30 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 31 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 32 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 33 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 34 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 35 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 36 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 37 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 38 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 39 4 'Structure model' '_struct_conn_type.id' 40 4 'Structure model' '_struct_ref_seq_dif.details' 41 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 42 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 43 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1YQM _pdbx_database_status.recvd_initial_deposition_date 2005-02-02 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1YQK 'Structure of hOGG1 crosslinked to guanine containing DNA' unspecified PDB 1EBM 'Structure of hOGG1 with oxoG containing DNA' unspecified PDB 1KO9 'Native structure of hOGG1' unspecified PDB 1FN7 'Structure of hOGG1 with abasic DNA' unspecified PDB 1YQL 'crosslinked with 7-deaza-8-azaguanine containing DNA' unspecified PDB 1YQR 'crosslinked to oxoG containing DNA' unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Banerjee, A.' 1 'Yang, W.' 2 'Karplus, M.' 3 'Verdine, G.L.' 4 # _citation.id primary _citation.title 'Structure of a repair enzyme interrogating undamaged DNA elucidates recognition of damaged DNA.' _citation.journal_abbrev Nature _citation.journal_volume 434 _citation.page_first 612 _citation.page_last 618 _citation.year 2005 _citation.journal_id_ASTM NATUAS _citation.country UK _citation.journal_id_ISSN 0028-0836 _citation.journal_id_CSD 0006 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15800616 _citation.pdbx_database_id_DOI 10.1038/nature03458 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Banerjee, A.' 1 ? primary 'Yang, W.' 2 ? primary 'Karplus, M.' 3 ? primary 'Verdine, G.L.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(P*GP*GP*TP*AP*GP*AP*CP*CP*TP*GP*GP*AP*C)-3'" 4016.623 1 ? ? ? ? 2 polymer syn "5'-D(P*GP*TP*CP*CP*AP*(7GU)P*GP*TP*CP*TP*AP*C)-3'" 3637.391 1 ? ? ? ? 3 polymer man 'N-glycosylase/DNA lyase' 35970.695 1 3.2.2.- N149C,K249Q '8-oxoguanine DNA glycosylase' ? 4 non-polymer syn 'CALCIUM ION' 40.078 2 ? ? ? ? 5 water nat water 18.015 96 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DG)(DG)(DT)(DA)(DG)(DA)(DC)(DC)(DT)(DG)(DG)(DA)(DC)' GGTAGACCTGGAC B ? 2 polydeoxyribonucleotide no yes '(DG)(DT)(DC)(DC)(DA)(7GU)(DG)(DT)(DC)(DT)(DA)(DC)' GTCCAGGTCTAC C ? 3 'polypeptide(L)' no no ;SEFGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLADQVWTLTQTEEQLHCTVYRGDKSQASRP TPDELEAVRKYFQLDVTLAQLYHHWGSVDSHFQEVAQKFQGVRLLRQDPIECLFSFICSSCNNIARITGMVERLCQAFGP RLIQLDDVTYHGFPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKALCILPGVGT QVADCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELGNFFRSLWGPYAGWAQAVLFSADLRQSR ; ;SEFGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLADQVWTLTQTEEQLHCTVYRGDKSQASRP TPDELEAVRKYFQLDVTLAQLYHHWGSVDSHFQEVAQKFQGVRLLRQDPIECLFSFICSSCNNIARITGMVERLCQAFGP RLIQLDDVTYHGFPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKALCILPGVGT QVADCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELGNFFRSLWGPYAGWAQAVLFSADLRQSR ; A ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'CALCIUM ION' CA 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DG n 1 3 DT n 1 4 DA n 1 5 DG n 1 6 DA n 1 7 DC n 1 8 DC n 1 9 DT n 1 10 DG n 1 11 DG n 1 12 DA n 1 13 DC n 2 1 DG n 2 2 DT n 2 3 DC n 2 4 DC n 2 5 DA n 2 6 7GU n 2 7 DG n 2 8 DT n 2 9 DC n 2 10 DT n 2 11 DA n 2 12 DC n 3 1 SER n 3 2 GLU n 3 3 PHE n 3 4 GLY n 3 5 HIS n 3 6 ARG n 3 7 THR n 3 8 LEU n 3 9 ALA n 3 10 SER n 3 11 THR n 3 12 PRO n 3 13 ALA n 3 14 LEU n 3 15 TRP n 3 16 ALA n 3 17 SER n 3 18 ILE n 3 19 PRO n 3 20 CYS n 3 21 PRO n 3 22 ARG n 3 23 SER n 3 24 GLU n 3 25 LEU n 3 26 ARG n 3 27 LEU n 3 28 ASP n 3 29 LEU n 3 30 VAL n 3 31 LEU n 3 32 PRO n 3 33 SER n 3 34 GLY n 3 35 GLN n 3 36 SER n 3 37 PHE n 3 38 ARG n 3 39 TRP n 3 40 ARG n 3 41 GLU n 3 42 GLN n 3 43 SER n 3 44 PRO n 3 45 ALA n 3 46 HIS n 3 47 TRP n 3 48 SER n 3 49 GLY n 3 50 VAL n 3 51 LEU n 3 52 ALA n 3 53 ASP n 3 54 GLN n 3 55 VAL n 3 56 TRP n 3 57 THR n 3 58 LEU n 3 59 THR n 3 60 GLN n 3 61 THR n 3 62 GLU n 3 63 GLU n 3 64 GLN n 3 65 LEU n 3 66 HIS n 3 67 CYS n 3 68 THR n 3 69 VAL n 3 70 TYR n 3 71 ARG n 3 72 GLY n 3 73 ASP n 3 74 LYS n 3 75 SER n 3 76 GLN n 3 77 ALA n 3 78 SER n 3 79 ARG n 3 80 PRO n 3 81 THR n 3 82 PRO n 3 83 ASP n 3 84 GLU n 3 85 LEU n 3 86 GLU n 3 87 ALA n 3 88 VAL n 3 89 ARG n 3 90 LYS n 3 91 TYR n 3 92 PHE n 3 93 GLN n 3 94 LEU n 3 95 ASP n 3 96 VAL n 3 97 THR n 3 98 LEU n 3 99 ALA n 3 100 GLN n 3 101 LEU n 3 102 TYR n 3 103 HIS n 3 104 HIS n 3 105 TRP n 3 106 GLY n 3 107 SER n 3 108 VAL n 3 109 ASP n 3 110 SER n 3 111 HIS n 3 112 PHE n 3 113 GLN n 3 114 GLU n 3 115 VAL n 3 116 ALA n 3 117 GLN n 3 118 LYS n 3 119 PHE n 3 120 GLN n 3 121 GLY n 3 122 VAL n 3 123 ARG n 3 124 LEU n 3 125 LEU n 3 126 ARG n 3 127 GLN n 3 128 ASP n 3 129 PRO n 3 130 ILE n 3 131 GLU n 3 132 CYS n 3 133 LEU n 3 134 PHE n 3 135 SER n 3 136 PHE n 3 137 ILE n 3 138 CYS n 3 139 SER n 3 140 SER n 3 141 CYS n 3 142 ASN n 3 143 ASN n 3 144 ILE n 3 145 ALA n 3 146 ARG n 3 147 ILE n 3 148 THR n 3 149 GLY n 3 150 MET n 3 151 VAL n 3 152 GLU n 3 153 ARG n 3 154 LEU n 3 155 CYS n 3 156 GLN n 3 157 ALA n 3 158 PHE n 3 159 GLY n 3 160 PRO n 3 161 ARG n 3 162 LEU n 3 163 ILE n 3 164 GLN n 3 165 LEU n 3 166 ASP n 3 167 ASP n 3 168 VAL n 3 169 THR n 3 170 TYR n 3 171 HIS n 3 172 GLY n 3 173 PHE n 3 174 PRO n 3 175 SER n 3 176 LEU n 3 177 GLN n 3 178 ALA n 3 179 LEU n 3 180 ALA n 3 181 GLY n 3 182 PRO n 3 183 GLU n 3 184 VAL n 3 185 GLU n 3 186 ALA n 3 187 HIS n 3 188 LEU n 3 189 ARG n 3 190 LYS n 3 191 LEU n 3 192 GLY n 3 193 LEU n 3 194 GLY n 3 195 TYR n 3 196 ARG n 3 197 ALA n 3 198 ARG n 3 199 TYR n 3 200 VAL n 3 201 SER n 3 202 ALA n 3 203 SER n 3 204 ALA n 3 205 ARG n 3 206 ALA n 3 207 ILE n 3 208 LEU n 3 209 GLU n 3 210 GLU n 3 211 GLN n 3 212 GLY n 3 213 GLY n 3 214 LEU n 3 215 ALA n 3 216 TRP n 3 217 LEU n 3 218 GLN n 3 219 GLN n 3 220 LEU n 3 221 ARG n 3 222 GLU n 3 223 SER n 3 224 SER n 3 225 TYR n 3 226 GLU n 3 227 GLU n 3 228 ALA n 3 229 HIS n 3 230 LYS n 3 231 ALA n 3 232 LEU n 3 233 CYS n 3 234 ILE n 3 235 LEU n 3 236 PRO n 3 237 GLY n 3 238 VAL n 3 239 GLY n 3 240 THR n 3 241 GLN n 3 242 VAL n 3 243 ALA n 3 244 ASP n 3 245 CYS n 3 246 ILE n 3 247 CYS n 3 248 LEU n 3 249 MET n 3 250 ALA n 3 251 LEU n 3 252 ASP n 3 253 LYS n 3 254 PRO n 3 255 GLN n 3 256 ALA n 3 257 VAL n 3 258 PRO n 3 259 VAL n 3 260 ASP n 3 261 VAL n 3 262 HIS n 3 263 MET n 3 264 TRP n 3 265 HIS n 3 266 ILE n 3 267 ALA n 3 268 GLN n 3 269 ARG n 3 270 ASP n 3 271 TYR n 3 272 SER n 3 273 TRP n 3 274 HIS n 3 275 PRO n 3 276 THR n 3 277 THR n 3 278 SER n 3 279 GLN n 3 280 ALA n 3 281 LYS n 3 282 GLY n 3 283 PRO n 3 284 SER n 3 285 PRO n 3 286 GLN n 3 287 THR n 3 288 ASN n 3 289 LYS n 3 290 GLU n 3 291 LEU n 3 292 GLY n 3 293 ASN n 3 294 PHE n 3 295 PHE n 3 296 ARG n 3 297 SER n 3 298 LEU n 3 299 TRP n 3 300 GLY n 3 301 PRO n 3 302 TYR n 3 303 ALA n 3 304 GLY n 3 305 TRP n 3 306 ALA n 3 307 GLN n 3 308 ALA n 3 309 VAL n 3 310 LEU n 3 311 PHE n 3 312 SER n 3 313 ALA n 3 314 ASP n 3 315 LEU n 3 316 ARG n 3 317 GLN n 3 318 SER n 3 319 ARG n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene 'OGG1, MMH, MUTM, OGH1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL-21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET30-a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 7GU 'DNA linking' n "7-DEAZA-2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C11 H15 N4 O7 P' 346.233 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG GUA B . n A 1 2 DG 2 2 2 DG GUA B . n A 1 3 DT 3 3 3 DT THY B . n A 1 4 DA 4 4 4 DA ADE B . n A 1 5 DG 5 5 5 DG GUA B . n A 1 6 DA 6 6 6 DA ADE B . n A 1 7 DC 7 7 7 DC CYT B . n A 1 8 DC 8 8 8 DC CYT B . n A 1 9 DT 9 9 9 DT THY B . n A 1 10 DG 10 10 10 DG GUA B . n A 1 11 DG 11 11 11 DG GUA B . n A 1 12 DA 12 12 12 DA ADE B . n A 1 13 DC 13 13 13 DC CYT B . n B 2 1 DG 1 18 18 DG GUA C . n B 2 2 DT 2 19 19 DT THY C . n B 2 3 DC 3 20 20 DC CYT C . n B 2 4 DC 4 21 21 DC CYT C . n B 2 5 DA 5 22 22 DA ADE C . n B 2 6 7GU 6 23 23 7GU DZA C . n B 2 7 DG 7 24 24 DG GUA C . n B 2 8 DT 8 25 25 DT THY C . n B 2 9 DC 9 26 26 DC CYT C . n B 2 10 DT 10 27 27 DT THY C . n B 2 11 DA 11 28 28 DA ADE C . n B 2 12 DC 12 29 29 DC CYT C . n C 3 1 SER 1 9 9 SER SER A . n C 3 2 GLU 2 10 10 GLU GLU A . n C 3 3 PHE 3 11 11 PHE PHE A . n C 3 4 GLY 4 12 12 GLY GLY A . n C 3 5 HIS 5 13 13 HIS HIS A . n C 3 6 ARG 6 14 14 ARG ARG A . n C 3 7 THR 7 15 15 THR THR A . n C 3 8 LEU 8 16 16 LEU LEU A . n C 3 9 ALA 9 17 17 ALA ALA A . n C 3 10 SER 10 18 18 SER SER A . n C 3 11 THR 11 19 19 THR THR A . n C 3 12 PRO 12 20 20 PRO PRO A . n C 3 13 ALA 13 21 21 ALA ALA A . n C 3 14 LEU 14 22 22 LEU LEU A . n C 3 15 TRP 15 23 23 TRP TRP A . n C 3 16 ALA 16 24 24 ALA ALA A . n C 3 17 SER 17 25 25 SER SER A . n C 3 18 ILE 18 26 26 ILE ILE A . n C 3 19 PRO 19 27 27 PRO PRO A . n C 3 20 CYS 20 28 28 CYS CYS A . n C 3 21 PRO 21 29 29 PRO PRO A . n C 3 22 ARG 22 30 30 ARG ARG A . n C 3 23 SER 23 31 31 SER SER A . n C 3 24 GLU 24 32 32 GLU GLU A . n C 3 25 LEU 25 33 33 LEU LEU A . n C 3 26 ARG 26 34 34 ARG ARG A . n C 3 27 LEU 27 35 35 LEU LEU A . n C 3 28 ASP 28 36 36 ASP ASP A . n C 3 29 LEU 29 37 37 LEU LEU A . n C 3 30 VAL 30 38 38 VAL VAL A . n C 3 31 LEU 31 39 39 LEU LEU A . n C 3 32 PRO 32 40 40 PRO PRO A . n C 3 33 SER 33 41 41 SER SER A . n C 3 34 GLY 34 42 42 GLY GLY A . n C 3 35 GLN 35 43 43 GLN GLN A . n C 3 36 SER 36 44 44 SER SER A . n C 3 37 PHE 37 45 45 PHE PHE A . n C 3 38 ARG 38 46 46 ARG ARG A . n C 3 39 TRP 39 47 47 TRP TRP A . n C 3 40 ARG 40 48 48 ARG ARG A . n C 3 41 GLU 41 49 49 GLU GLU A . n C 3 42 GLN 42 50 50 GLN GLN A . n C 3 43 SER 43 51 51 SER SER A . n C 3 44 PRO 44 52 52 PRO PRO A . n C 3 45 ALA 45 53 53 ALA ALA A . n C 3 46 HIS 46 54 54 HIS HIS A . n C 3 47 TRP 47 55 55 TRP TRP A . n C 3 48 SER 48 56 56 SER SER A . n C 3 49 GLY 49 57 57 GLY GLY A . n C 3 50 VAL 50 58 58 VAL VAL A . n C 3 51 LEU 51 59 59 LEU LEU A . n C 3 52 ALA 52 60 60 ALA ALA A . n C 3 53 ASP 53 61 61 ASP ASP A . n C 3 54 GLN 54 62 62 GLN GLN A . n C 3 55 VAL 55 63 63 VAL VAL A . n C 3 56 TRP 56 64 64 TRP TRP A . n C 3 57 THR 57 65 65 THR THR A . n C 3 58 LEU 58 66 66 LEU LEU A . n C 3 59 THR 59 67 67 THR THR A . n C 3 60 GLN 60 68 68 GLN GLN A . n C 3 61 THR 61 69 69 THR THR A . n C 3 62 GLU 62 70 70 GLU GLU A . n C 3 63 GLU 63 71 71 GLU GLU A . n C 3 64 GLN 64 72 72 GLN GLN A . n C 3 65 LEU 65 73 73 LEU LEU A . n C 3 66 HIS 66 74 74 HIS HIS A . n C 3 67 CYS 67 75 75 CYS CYS A . n C 3 68 THR 68 76 76 THR THR A . n C 3 69 VAL 69 77 77 VAL VAL A . n C 3 70 TYR 70 78 78 TYR TYR A . n C 3 71 ARG 71 79 79 ARG ARG A . n C 3 72 GLY 72 80 ? ? ? A . n C 3 73 ASP 73 81 ? ? ? A . n C 3 74 LYS 74 82 ? ? ? A . n C 3 75 SER 75 83 83 SER SER A . n C 3 76 GLN 76 84 84 GLN GLN A . n C 3 77 ALA 77 85 85 ALA ALA A . n C 3 78 SER 78 86 86 SER SER A . n C 3 79 ARG 79 87 87 ARG ALA A . n C 3 80 PRO 80 88 88 PRO PRO A . n C 3 81 THR 81 89 89 THR THR A . n C 3 82 PRO 82 90 90 PRO PRO A . n C 3 83 ASP 83 91 91 ASP ASP A . n C 3 84 GLU 84 92 92 GLU GLU A . n C 3 85 LEU 85 93 93 LEU LEU A . n C 3 86 GLU 86 94 94 GLU GLU A . n C 3 87 ALA 87 95 95 ALA ALA A . n C 3 88 VAL 88 96 96 VAL VAL A . n C 3 89 ARG 89 97 97 ARG ARG A . n C 3 90 LYS 90 98 98 LYS LYS A . n C 3 91 TYR 91 99 99 TYR TYR A . n C 3 92 PHE 92 100 100 PHE PHE A . n C 3 93 GLN 93 101 101 GLN GLN A . n C 3 94 LEU 94 102 102 LEU LEU A . n C 3 95 ASP 95 103 103 ASP ASP A . n C 3 96 VAL 96 104 104 VAL VAL A . n C 3 97 THR 97 105 105 THR THR A . n C 3 98 LEU 98 106 106 LEU LEU A . n C 3 99 ALA 99 107 107 ALA ALA A . n C 3 100 GLN 100 108 108 GLN GLN A . n C 3 101 LEU 101 109 109 LEU LEU A . n C 3 102 TYR 102 110 110 TYR TYR A . n C 3 103 HIS 103 111 111 HIS HIS A . n C 3 104 HIS 104 112 112 HIS HIS A . n C 3 105 TRP 105 113 113 TRP TRP A . n C 3 106 GLY 106 114 114 GLY GLY A . n C 3 107 SER 107 115 115 SER SER A . n C 3 108 VAL 108 116 116 VAL VAL A . n C 3 109 ASP 109 117 117 ASP ASP A . n C 3 110 SER 110 118 118 SER SER A . n C 3 111 HIS 111 119 119 HIS HIS A . n C 3 112 PHE 112 120 120 PHE PHE A . n C 3 113 GLN 113 121 121 GLN GLN A . n C 3 114 GLU 114 122 122 GLU ALA A . n C 3 115 VAL 115 123 123 VAL VAL A . n C 3 116 ALA 116 124 124 ALA ALA A . n C 3 117 GLN 117 125 125 GLN GLN A . n C 3 118 LYS 118 126 126 LYS ALA A . n C 3 119 PHE 119 127 127 PHE PHE A . n C 3 120 GLN 120 128 128 GLN ALA A . n C 3 121 GLY 121 129 129 GLY GLY A . n C 3 122 VAL 122 130 130 VAL VAL A . n C 3 123 ARG 123 131 131 ARG ARG A . n C 3 124 LEU 124 132 132 LEU LEU A . n C 3 125 LEU 125 133 133 LEU LEU A . n C 3 126 ARG 126 134 134 ARG ARG A . n C 3 127 GLN 127 135 135 GLN GLN A . n C 3 128 ASP 128 136 136 ASP ASP A . n C 3 129 PRO 129 137 137 PRO PRO A . n C 3 130 ILE 130 138 138 ILE ILE A . n C 3 131 GLU 131 139 139 GLU GLU A . n C 3 132 CYS 132 140 140 CYS CYS A . n C 3 133 LEU 133 141 141 LEU LEU A . n C 3 134 PHE 134 142 142 PHE PHE A . n C 3 135 SER 135 143 143 SER SER A . n C 3 136 PHE 136 144 144 PHE PHE A . n C 3 137 ILE 137 145 145 ILE ILE A . n C 3 138 CYS 138 146 146 CYS CYS A . n C 3 139 SER 139 147 147 SER SER A . n C 3 140 SER 140 148 148 SER SER A . n C 3 141 CYS 141 149 149 CYS CYS A . n C 3 142 ASN 142 150 150 ASN ASN A . n C 3 143 ASN 143 151 151 ASN ASN A . n C 3 144 ILE 144 152 152 ILE ILE A . n C 3 145 ALA 145 153 153 ALA ALA A . n C 3 146 ARG 146 154 154 ARG ARG A . n C 3 147 ILE 147 155 155 ILE ILE A . n C 3 148 THR 148 156 156 THR THR A . n C 3 149 GLY 149 157 157 GLY GLY A . n C 3 150 MET 150 158 158 MET MET A . n C 3 151 VAL 151 159 159 VAL VAL A . n C 3 152 GLU 152 160 160 GLU GLU A . n C 3 153 ARG 153 161 161 ARG ARG A . n C 3 154 LEU 154 162 162 LEU LEU A . n C 3 155 CYS 155 163 163 CYS CYS A . n C 3 156 GLN 156 164 164 GLN GLN A . n C 3 157 ALA 157 165 165 ALA ALA A . n C 3 158 PHE 158 166 166 PHE PHE A . n C 3 159 GLY 159 167 167 GLY GLY A . n C 3 160 PRO 160 168 168 PRO PRO A . n C 3 161 ARG 161 169 169 ARG ARG A . n C 3 162 LEU 162 170 170 LEU LEU A . n C 3 163 ILE 163 171 171 ILE ILE A . n C 3 164 GLN 164 172 172 GLN GLN A . n C 3 165 LEU 165 173 173 LEU LEU A . n C 3 166 ASP 166 174 174 ASP ASP A . n C 3 167 ASP 167 175 175 ASP ASP A . n C 3 168 VAL 168 176 176 VAL VAL A . n C 3 169 THR 169 177 177 THR THR A . n C 3 170 TYR 170 178 178 TYR TYR A . n C 3 171 HIS 171 179 179 HIS HIS A . n C 3 172 GLY 172 180 180 GLY GLY A . n C 3 173 PHE 173 181 181 PHE PHE A . n C 3 174 PRO 174 182 182 PRO PRO A . n C 3 175 SER 175 183 183 SER SER A . n C 3 176 LEU 176 184 184 LEU LEU A . n C 3 177 GLN 177 185 185 GLN GLN A . n C 3 178 ALA 178 186 186 ALA ALA A . n C 3 179 LEU 179 187 187 LEU LEU A . n C 3 180 ALA 180 188 188 ALA ALA A . n C 3 181 GLY 181 189 189 GLY GLY A . n C 3 182 PRO 182 190 190 PRO PRO A . n C 3 183 GLU 183 191 191 GLU GLU A . n C 3 184 VAL 184 192 192 VAL VAL A . n C 3 185 GLU 185 193 193 GLU GLU A . n C 3 186 ALA 186 194 194 ALA ALA A . n C 3 187 HIS 187 195 195 HIS HIS A . n C 3 188 LEU 188 196 196 LEU LEU A . n C 3 189 ARG 189 197 197 ARG ARG A . n C 3 190 LYS 190 198 198 LYS LYS A . n C 3 191 LEU 191 199 199 LEU LEU A . n C 3 192 GLY 192 200 200 GLY GLY A . n C 3 193 LEU 193 201 201 LEU LEU A . n C 3 194 GLY 194 202 202 GLY GLY A . n C 3 195 TYR 195 203 203 TYR TYR A . n C 3 196 ARG 196 204 204 ARG ARG A . n C 3 197 ALA 197 205 205 ALA ALA A . n C 3 198 ARG 198 206 206 ARG ARG A . n C 3 199 TYR 199 207 207 TYR TYR A . n C 3 200 VAL 200 208 208 VAL VAL A . n C 3 201 SER 201 209 209 SER SER A . n C 3 202 ALA 202 210 210 ALA ALA A . n C 3 203 SER 203 211 211 SER SER A . n C 3 204 ALA 204 212 212 ALA ALA A . n C 3 205 ARG 205 213 213 ARG ARG A . n C 3 206 ALA 206 214 214 ALA ALA A . n C 3 207 ILE 207 215 215 ILE ILE A . n C 3 208 LEU 208 216 216 LEU LEU A . n C 3 209 GLU 209 217 217 GLU GLU A . n C 3 210 GLU 210 218 218 GLU GLU A . n C 3 211 GLN 211 219 219 GLN GLN A . n C 3 212 GLY 212 220 220 GLY GLY A . n C 3 213 GLY 213 221 221 GLY GLY A . n C 3 214 LEU 214 222 222 LEU LEU A . n C 3 215 ALA 215 223 223 ALA ALA A . n C 3 216 TRP 216 224 224 TRP TRP A . n C 3 217 LEU 217 225 225 LEU LEU A . n C 3 218 GLN 218 226 226 GLN GLN A . n C 3 219 GLN 219 227 227 GLN GLN A . n C 3 220 LEU 220 228 228 LEU LEU A . n C 3 221 ARG 221 229 229 ARG ARG A . n C 3 222 GLU 222 230 230 GLU GLU A . n C 3 223 SER 223 231 231 SER SER A . n C 3 224 SER 224 232 232 SER SER A . n C 3 225 TYR 225 233 233 TYR TYR A . n C 3 226 GLU 226 234 234 GLU ALA A . n C 3 227 GLU 227 235 235 GLU GLU A . n C 3 228 ALA 228 236 236 ALA ALA A . n C 3 229 HIS 229 237 237 HIS HIS A . n C 3 230 LYS 230 238 238 LYS LYS A . n C 3 231 ALA 231 239 239 ALA ALA A . n C 3 232 LEU 232 240 240 LEU LEU A . n C 3 233 CYS 233 241 241 CYS CYS A . n C 3 234 ILE 234 242 242 ILE ILE A . n C 3 235 LEU 235 243 243 LEU LEU A . n C 3 236 PRO 236 244 244 PRO PRO A . n C 3 237 GLY 237 245 245 GLY GLY A . n C 3 238 VAL 238 246 246 VAL VAL A . n C 3 239 GLY 239 247 247 GLY GLY A . n C 3 240 THR 240 248 248 THR THR A . n C 3 241 GLN 241 249 249 GLN GLN A . n C 3 242 VAL 242 250 250 VAL VAL A . n C 3 243 ALA 243 251 251 ALA ALA A . n C 3 244 ASP 244 252 252 ASP ASP A . n C 3 245 CYS 245 253 253 CYS CYS A . n C 3 246 ILE 246 254 254 ILE ILE A . n C 3 247 CYS 247 255 255 CYS CYS A . n C 3 248 LEU 248 256 256 LEU LEU A . n C 3 249 MET 249 257 257 MET MET A . n C 3 250 ALA 250 258 258 ALA ALA A . n C 3 251 LEU 251 259 259 LEU LEU A . n C 3 252 ASP 252 260 260 ASP ASP A . n C 3 253 LYS 253 261 261 LYS LYS A . n C 3 254 PRO 254 262 262 PRO PRO A . n C 3 255 GLN 255 263 263 GLN GLN A . n C 3 256 ALA 256 264 264 ALA ALA A . n C 3 257 VAL 257 265 265 VAL VAL A . n C 3 258 PRO 258 266 266 PRO PRO A . n C 3 259 VAL 259 267 267 VAL VAL A . n C 3 260 ASP 260 268 268 ASP ASP A . n C 3 261 VAL 261 269 269 VAL VAL A . n C 3 262 HIS 262 270 270 HIS HIS A . n C 3 263 MET 263 271 271 MET MET A . n C 3 264 TRP 264 272 272 TRP TRP A . n C 3 265 HIS 265 273 273 HIS HIS A . n C 3 266 ILE 266 274 274 ILE ILE A . n C 3 267 ALA 267 275 275 ALA ALA A . n C 3 268 GLN 268 276 276 GLN GLN A . n C 3 269 ARG 269 277 277 ARG ARG A . n C 3 270 ASP 270 278 278 ASP ASP A . n C 3 271 TYR 271 279 279 TYR TYR A . n C 3 272 SER 272 280 280 SER SER A . n C 3 273 TRP 273 281 281 TRP TRP A . n C 3 274 HIS 274 282 282 HIS HIS A . n C 3 275 PRO 275 283 283 PRO PRO A . n C 3 276 THR 276 284 284 THR THR A . n C 3 277 THR 277 285 285 THR THR A . n C 3 278 SER 278 286 286 SER ALA A . n C 3 279 GLN 279 287 287 GLN GLN A . n C 3 280 ALA 280 288 288 ALA ALA A . n C 3 281 LYS 281 289 289 LYS ALA A . n C 3 282 GLY 282 290 290 GLY GLY A . n C 3 283 PRO 283 291 291 PRO PRO A . n C 3 284 SER 284 292 292 SER SER A . n C 3 285 PRO 285 293 293 PRO PRO A . n C 3 286 GLN 286 294 294 GLN ALA A . n C 3 287 THR 287 295 295 THR THR A . n C 3 288 ASN 288 296 296 ASN ASN A . n C 3 289 LYS 289 297 297 LYS LYS A . n C 3 290 GLU 290 298 298 GLU GLU A . n C 3 291 LEU 291 299 299 LEU LEU A . n C 3 292 GLY 292 300 300 GLY GLY A . n C 3 293 ASN 293 301 301 ASN ASN A . n C 3 294 PHE 294 302 302 PHE PHE A . n C 3 295 PHE 295 303 303 PHE PHE A . n C 3 296 ARG 296 304 304 ARG ARG A . n C 3 297 SER 297 305 305 SER SER A . n C 3 298 LEU 298 306 306 LEU LEU A . n C 3 299 TRP 299 307 307 TRP TRP A . n C 3 300 GLY 300 308 308 GLY GLY A . n C 3 301 PRO 301 309 309 PRO PRO A . n C 3 302 TYR 302 310 310 TYR TYR A . n C 3 303 ALA 303 311 311 ALA ALA A . n C 3 304 GLY 304 312 312 GLY GLY A . n C 3 305 TRP 305 313 313 TRP TRP A . n C 3 306 ALA 306 314 314 ALA ALA A . n C 3 307 GLN 307 315 315 GLN GLN A . n C 3 308 ALA 308 316 316 ALA ALA A . n C 3 309 VAL 309 317 317 VAL VAL A . n C 3 310 LEU 310 318 318 LEU LEU A . n C 3 311 PHE 311 319 319 PHE PHE A . n C 3 312 SER 312 320 320 SER SER A . n C 3 313 ALA 313 321 321 ALA ALA A . n C 3 314 ASP 314 322 322 ASP ASP A . n C 3 315 LEU 315 323 323 LEU LEU A . n C 3 316 ARG 316 324 324 ARG ARG A . n C 3 317 GLN 317 325 325 GLN ALA A . n C 3 318 SER 318 326 ? ? ? A . n C 3 319 ARG 319 327 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 CA 1 201 1 CA CA2 C . E 4 CA 1 328 2 CA CA2 A . F 5 HOH 1 41 41 HOH HOH B . G 5 HOH 1 202 21 HOH HOH C . G 5 HOH 2 203 35 HOH HOH C . G 5 HOH 3 204 80 HOH HOH C . G 5 HOH 4 205 105 HOH HOH C . G 5 HOH 5 206 110 HOH HOH C . H 5 HOH 1 329 1 HOH HOH A . H 5 HOH 2 330 3 HOH HOH A . H 5 HOH 3 331 4 HOH HOH A . H 5 HOH 4 332 5 HOH HOH A . H 5 HOH 5 333 6 HOH HOH A . H 5 HOH 6 334 7 HOH HOH A . H 5 HOH 7 335 8 HOH HOH A . H 5 HOH 8 336 9 HOH HOH A . H 5 HOH 9 337 10 HOH HOH A . H 5 HOH 10 338 11 HOH HOH A . H 5 HOH 11 339 12 HOH HOH A . H 5 HOH 12 340 13 HOH HOH A . H 5 HOH 13 341 14 HOH HOH A . H 5 HOH 14 342 15 HOH HOH A . H 5 HOH 15 343 16 HOH HOH A . H 5 HOH 16 344 17 HOH HOH A . H 5 HOH 17 345 18 HOH HOH A . H 5 HOH 18 346 19 HOH HOH A . H 5 HOH 19 347 20 HOH HOH A . H 5 HOH 20 348 22 HOH HOH A . H 5 HOH 21 349 23 HOH HOH A . H 5 HOH 22 350 24 HOH HOH A . H 5 HOH 23 351 25 HOH HOH A . H 5 HOH 24 352 26 HOH HOH A . H 5 HOH 25 353 27 HOH HOH A . H 5 HOH 26 354 28 HOH HOH A . H 5 HOH 27 355 29 HOH HOH A . H 5 HOH 28 356 30 HOH HOH A . H 5 HOH 29 357 31 HOH HOH A . H 5 HOH 30 358 32 HOH HOH A . H 5 HOH 31 359 33 HOH HOH A . H 5 HOH 32 360 34 HOH HOH A . H 5 HOH 33 361 36 HOH HOH A . H 5 HOH 34 362 37 HOH HOH A . H 5 HOH 35 363 38 HOH HOH A . H 5 HOH 36 364 39 HOH HOH A . H 5 HOH 37 365 42 HOH HOH A . H 5 HOH 38 366 43 HOH HOH A . H 5 HOH 39 367 44 HOH HOH A . H 5 HOH 40 368 45 HOH HOH A . H 5 HOH 41 369 46 HOH HOH A . H 5 HOH 42 370 47 HOH HOH A . H 5 HOH 43 371 48 HOH HOH A . H 5 HOH 44 372 49 HOH HOH A . H 5 HOH 45 373 50 HOH HOH A . H 5 HOH 46 374 51 HOH HOH A . H 5 HOH 47 375 52 HOH HOH A . H 5 HOH 48 376 53 HOH HOH A . H 5 HOH 49 377 54 HOH HOH A . H 5 HOH 50 378 55 HOH HOH A . H 5 HOH 51 379 56 HOH HOH A . H 5 HOH 52 380 57 HOH HOH A . H 5 HOH 53 381 58 HOH HOH A . H 5 HOH 54 382 59 HOH HOH A . H 5 HOH 55 383 60 HOH HOH A . H 5 HOH 56 384 61 HOH HOH A . H 5 HOH 57 385 62 HOH HOH A . H 5 HOH 58 386 65 HOH HOH A . H 5 HOH 59 387 66 HOH HOH A . H 5 HOH 60 388 67 HOH HOH A . H 5 HOH 61 389 68 HOH HOH A . H 5 HOH 62 390 69 HOH HOH A . H 5 HOH 63 391 70 HOH HOH A . H 5 HOH 64 392 72 HOH HOH A . H 5 HOH 65 393 74 HOH HOH A . H 5 HOH 66 394 75 HOH HOH A . H 5 HOH 67 395 76 HOH HOH A . H 5 HOH 68 396 78 HOH HOH A . H 5 HOH 69 397 79 HOH HOH A . H 5 HOH 70 398 83 HOH HOH A . H 5 HOH 71 399 84 HOH HOH A . H 5 HOH 72 400 88 HOH HOH A . H 5 HOH 73 401 94 HOH HOH A . H 5 HOH 74 402 101 HOH HOH A . H 5 HOH 75 403 102 HOH HOH A . H 5 HOH 76 404 103 HOH HOH A . H 5 HOH 77 405 104 HOH HOH A . H 5 HOH 78 406 106 HOH HOH A . H 5 HOH 79 407 107 HOH HOH A . H 5 HOH 80 408 108 HOH HOH A . H 5 HOH 81 409 109 HOH HOH A . H 5 HOH 82 410 111 HOH HOH A . H 5 HOH 83 411 112 HOH HOH A . H 5 HOH 84 412 113 HOH HOH A . H 5 HOH 85 413 114 HOH HOH A . H 5 HOH 86 414 115 HOH HOH A . H 5 HOH 87 415 116 HOH HOH A . H 5 HOH 88 416 117 HOH HOH A . H 5 HOH 89 417 118 HOH HOH A . H 5 HOH 90 418 119 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLN 84 ? CD ? C GLN 76 CD 2 1 Y 1 A GLN 84 ? OE1 ? C GLN 76 OE1 3 1 Y 1 A GLN 84 ? NE2 ? C GLN 76 NE2 4 1 Y 1 A ARG 87 ? CG ? C ARG 79 CG 5 1 Y 1 A ARG 87 ? CD ? C ARG 79 CD 6 1 Y 1 A ARG 87 ? NE ? C ARG 79 NE 7 1 Y 1 A ARG 87 ? CZ ? C ARG 79 CZ 8 1 Y 1 A ARG 87 ? NH1 ? C ARG 79 NH1 9 1 Y 1 A ARG 87 ? NH2 ? C ARG 79 NH2 10 1 Y 1 A GLU 122 ? CG ? C GLU 114 CG 11 1 Y 1 A GLU 122 ? CD ? C GLU 114 CD 12 1 Y 1 A GLU 122 ? OE1 ? C GLU 114 OE1 13 1 Y 1 A GLU 122 ? OE2 ? C GLU 114 OE2 14 1 Y 1 A LYS 126 ? CG ? C LYS 118 CG 15 1 Y 1 A LYS 126 ? CD ? C LYS 118 CD 16 1 Y 1 A LYS 126 ? CE ? C LYS 118 CE 17 1 Y 1 A LYS 126 ? NZ ? C LYS 118 NZ 18 1 Y 1 A GLN 128 ? CG ? C GLN 120 CG 19 1 Y 1 A GLN 128 ? CD ? C GLN 120 CD 20 1 Y 1 A GLN 128 ? OE1 ? C GLN 120 OE1 21 1 Y 1 A GLN 128 ? NE2 ? C GLN 120 NE2 22 1 Y 1 A ARG 206 ? CZ ? C ARG 198 CZ 23 1 Y 1 A ARG 206 ? NH1 ? C ARG 198 NH1 24 1 Y 1 A ARG 206 ? NH2 ? C ARG 198 NH2 25 1 Y 1 A GLU 234 ? CG ? C GLU 226 CG 26 1 Y 1 A GLU 234 ? CD ? C GLU 226 CD 27 1 Y 1 A GLU 234 ? OE1 ? C GLU 226 OE1 28 1 Y 1 A GLU 234 ? OE2 ? C GLU 226 OE2 29 1 Y 1 A SER 286 ? OG ? C SER 278 OG 30 1 Y 1 A LYS 289 ? CG ? C LYS 281 CG 31 1 Y 1 A LYS 289 ? CD ? C LYS 281 CD 32 1 Y 1 A LYS 289 ? CE ? C LYS 281 CE 33 1 Y 1 A LYS 289 ? NZ ? C LYS 281 NZ 34 1 Y 1 A GLN 294 ? CG ? C GLN 286 CG 35 1 Y 1 A GLN 294 ? CD ? C GLN 286 CD 36 1 Y 1 A GLN 294 ? OE1 ? C GLN 286 OE1 37 1 Y 1 A GLN 294 ? NE2 ? C GLN 286 NE2 38 1 Y 1 A GLN 325 ? CG ? C GLN 317 CG 39 1 Y 1 A GLN 325 ? CD ? C GLN 317 CD 40 1 Y 1 A GLN 325 ? OE1 ? C GLN 317 OE1 41 1 Y 1 A GLN 325 ? NE2 ? C GLN 317 NE2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.1 ? 1 HKL-2000 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 CNS phasing . ? 4 # _cell.entry_id 1YQM _cell.length_a 92.508 _cell.length_b 92.508 _cell.length_c 210.649 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1YQM _symmetry.space_group_name_H-M 'P 65 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? # _exptl.entry_id 1YQM _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.96 _exptl_crystal.density_percent_sol 58.45 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2003-03-08 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X4A' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X4A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.979 # _reflns.entry_id 1YQM _reflns.observed_criterion_sigma_I 2 _reflns.observed_criterion_sigma_F 2 _reflns.d_resolution_low 44.01 _reflns.d_resolution_high 2.5 _reflns.number_obs 17250 _reflns.number_all 19214 _reflns.percent_possible_obs 89.8 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 27.8 _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.50 _reflns_shell.d_res_low 2.59 _reflns_shell.percent_possible_all 76.4 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1YQM _refine.ls_number_reflns_obs 17250 _refine.ls_number_reflns_all 19214 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 258229.63 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 37.29 _refine.ls_d_res_high 2.50 _refine.ls_percent_reflns_obs 89.7 _refine.ls_R_factor_obs 0.212 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.212 _refine.ls_R_factor_R_free 0.261 _refine.ls_R_factor_R_free_error 0.006 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 9.8 _refine.ls_number_reflns_R_free 1698 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 38.9 _refine.aniso_B[1][1] -0.30 _refine.aniso_B[2][2] -0.30 _refine.aniso_B[3][3] 0.59 _refine.aniso_B[1][2] 0.15 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.338075 _refine.solvent_model_param_bsol 30.8549 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1YQM _refine_analyze.Luzzati_coordinate_error_obs 0.30 _refine_analyze.Luzzati_sigma_a_obs 0.30 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.39 _refine_analyze.Luzzati_sigma_a_free 0.40 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2455 _refine_hist.pdbx_number_atoms_nucleic_acid 516 _refine_hist.pdbx_number_atoms_ligand 2 _refine_hist.number_atoms_solvent 96 _refine_hist.number_atoms_total 3069 _refine_hist.d_res_high 2.50 _refine_hist.d_res_low 37.29 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.005 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.2 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 21.1 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.91 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.29 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.14 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 2.40 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 3.58 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 10 _refine_ls_shell.d_res_high 2.50 _refine_ls_shell.d_res_low 2.59 _refine_ls_shell.number_reflns_R_work 1274 _refine_ls_shell.R_factor_R_work 0.285 _refine_ls_shell.percent_reflns_obs 76.6 _refine_ls_shell.R_factor_R_free 0.349 _refine_ls_shell.R_factor_R_free_error 0.030 _refine_ls_shell.percent_reflns_R_free 9.8 _refine_ls_shell.number_reflns_R_free 139 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 DNA-RNA_REP.PARAM DNA-RNA.TOP 'X-RAY DIFFRACTION' 3 WATER_REP.PARAM WATER.TOP 'X-RAY DIFFRACTION' 4 ION.PARAM ION.TOP 'X-RAY DIFFRACTION' 5 NSLS NSLS 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 1YQM _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1YQM _struct.title 'Catalytically inactive human 8-oxoguanine glycosylase crosslinked to 7-deazaguanine containing DNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1YQM _struct_keywords.pdbx_keywords HYDROLASE/DNA _struct_keywords.text 'Disulfide crosslinking, 8-oxoG analog, HYDROLASE-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? G N N 5 ? H N N 5 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP OGG1_HUMAN O15527 3 ;GHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLADQVWTLTQTEEQLHCTVYRGDKSQASRPTPD ELEAVRKYFQLDVTLAQLYHHWGSVDSHFQEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLI QLDDVTYHGFPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKALCILPGVGTKVA DCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELGNFFRSLWGPYAGWAQAVLFSADLRQSR ; 12 ? 2 PDB 1YQM 1YQM 1 ? ? ? 3 PDB 1YQM 1YQM 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1YQM A 4 ? 319 ? O15527 12 ? 327 ? 12 327 2 2 1YQM B 1 ? 13 ? 1YQM 1 ? 13 ? 1 13 3 3 1YQM C 1 ? 12 ? 1YQM 18 ? 29 ? 18 29 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1YQM SER A 1 ? UNP O15527 ? ? 'cloning artifact' 9 1 1 1YQM GLU A 2 ? UNP O15527 ? ? 'cloning artifact' 10 2 1 1YQM PHE A 3 ? UNP O15527 ? ? 'cloning artifact' 11 3 1 1YQM CYS A 141 ? UNP O15527 ASN 149 'engineered mutation' 149 4 1 1YQM GLN A 241 ? UNP O15527 LYS 249 'engineered mutation' 249 5 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR C 11 ? TRP C 15 ? THR A 19 TRP A 23 5 ? 5 HELX_P HELX_P2 2 PRO C 21 ? LEU C 25 ? PRO A 29 LEU A 33 5 ? 5 HELX_P HELX_P3 3 ARG C 26 ? LEU C 31 ? ARG A 34 LEU A 39 1 ? 6 HELX_P HELX_P4 4 THR C 81 ? PHE C 92 ? THR A 89 PHE A 100 1 ? 12 HELX_P HELX_P5 5 THR C 97 ? ASP C 109 ? THR A 105 ASP A 117 1 ? 13 HELX_P HELX_P6 6 ASP C 109 ? GLN C 117 ? ASP A 117 GLN A 125 1 ? 9 HELX_P HELX_P7 7 ASP C 128 ? CYS C 138 ? ASP A 136 CYS A 146 1 ? 11 HELX_P HELX_P8 8 ASN C 143 ? GLY C 159 ? ASN A 151 GLY A 167 1 ? 17 HELX_P HELX_P9 9 SER C 175 ? ALA C 180 ? SER A 183 ALA A 188 1 ? 6 HELX_P HELX_P10 10 GLU C 183 ? LEU C 191 ? GLU A 191 LEU A 199 1 ? 9 HELX_P HELX_P11 11 TYR C 195 ? GLN C 211 ? TYR A 203 GLN A 219 1 ? 17 HELX_P HELX_P12 12 GLY C 213 ? LEU C 220 ? GLY A 221 LEU A 228 1 ? 8 HELX_P HELX_P13 13 SER C 224 ? CYS C 233 ? SER A 232 CYS A 241 1 ? 10 HELX_P HELX_P14 14 GLY C 239 ? LEU C 251 ? GLY A 247 LEU A 259 1 ? 13 HELX_P HELX_P15 15 ASP C 260 ? SER C 272 ? ASP A 268 SER A 280 1 ? 13 HELX_P HELX_P16 16 SER C 284 ? GLY C 300 ? SER A 292 GLY A 308 1 ? 17 HELX_P HELX_P17 17 TYR C 302 ? GLN C 317 ? TYR A 310 GLN A 325 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B DA 5 "O3'" ? ? ? 1_555 B 7GU 6 P ? ? C DA 22 C 7GU 23 1_555 ? ? ? ? ? ? ? 1.604 ? ? covale2 covale both ? B 7GU 6 "O3'" ? ? ? 1_555 B DG 7 P ? ? C 7GU 23 C DG 24 1_555 ? ? ? ? ? ? ? 1.604 ? ? metalc1 metalc ? ? B DG 7 OP1 ? ? ? 1_555 D CA . CA ? ? C DG 24 C CA 201 1_555 ? ? ? ? ? ? ? 2.650 ? ? metalc2 metalc ? ? B DG 7 OP2 ? ? ? 1_555 D CA . CA ? ? C DG 24 C CA 201 1_555 ? ? ? ? ? ? ? 2.923 ? ? metalc3 metalc ? ? B DC 9 OP2 ? ? ? 1_555 E CA . CA ? ? C DC 26 A CA 328 1_555 ? ? ? ? ? ? ? 3.188 ? ? metalc4 metalc ? ? B DC 9 OP1 ? ? ? 1_555 E CA . CA ? ? C DC 26 A CA 328 1_555 ? ? ? ? ? ? ? 2.465 ? ? metalc5 metalc ? ? C CYS 233 O ? ? ? 1_555 E CA . CA ? ? A CYS 241 A CA 328 1_555 ? ? ? ? ? ? ? 2.349 ? ? metalc6 metalc ? ? C LEU 235 O ? ? ? 1_555 E CA . CA ? ? A LEU 243 A CA 328 1_555 ? ? ? ? ? ? ? 2.762 ? ? metalc7 metalc ? ? C VAL 238 O ? ? ? 1_555 E CA . CA ? ? A VAL 246 A CA 328 1_555 ? ? ? ? ? ? ? 2.674 ? ? hydrog1 hydrog ? ? A DG 2 N1 ? ? ? 1_555 B DC 12 N3 ? ? B DG 2 C DC 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 2 N2 ? ? ? 1_555 B DC 12 O2 ? ? B DG 2 C DC 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B DC 12 N4 ? ? B DG 2 C DC 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DT 3 N3 ? ? ? 1_555 B DA 11 N1 ? ? B DT 3 C DA 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DT 3 O4 ? ? ? 1_555 B DA 11 N6 ? ? B DT 3 C DA 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DA 4 N1 ? ? ? 1_555 B DT 10 N3 ? ? B DA 4 C DT 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DA 4 N6 ? ? ? 1_555 B DT 10 O4 ? ? B DA 4 C DT 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 5 N1 ? ? ? 1_555 B DC 9 N3 ? ? B DG 5 C DC 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 5 N2 ? ? ? 1_555 B DC 9 O2 ? ? B DG 5 C DC 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 5 O6 ? ? ? 1_555 B DC 9 N4 ? ? B DG 5 C DC 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DA 6 N1 ? ? ? 1_555 B DT 8 N3 ? ? B DA 6 C DT 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DA 6 N6 ? ? ? 1_555 B DT 8 O4 ? ? B DA 6 C DT 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 7 N3 ? ? ? 1_555 B DG 7 N1 ? ? B DC 7 C DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 7 N4 ? ? ? 1_555 B DG 7 O6 ? ? B DC 7 C DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 7 O2 ? ? ? 1_555 B DG 7 N2 ? ? B DC 7 C DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DT 9 N3 ? ? ? 1_555 B DA 5 N1 ? ? B DT 9 C DA 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DT 9 O4 ? ? ? 1_555 B DA 5 N6 ? ? B DT 9 C DA 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DG 10 N1 ? ? ? 1_555 B DC 4 N3 ? ? B DG 10 C DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DG 10 N2 ? ? ? 1_555 B DC 4 O2 ? ? B DG 10 C DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DG 10 O6 ? ? ? 1_555 B DC 4 N4 ? ? B DG 10 C DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DG 11 N1 ? ? ? 1_555 B DC 3 N3 ? ? B DG 11 C DC 20 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog22 hydrog ? ? A DA 12 N1 ? ? ? 1_555 B DT 2 N3 ? ? B DA 12 C DT 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DA 12 N6 ? ? ? 1_555 B DT 2 O4 ? ? B DA 12 C DT 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DC 13 N3 ? ? ? 1_555 B DG 1 N1 ? ? B DC 13 C DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DC 13 N4 ? ? ? 1_555 B DG 1 O6 ? ? B DC 13 C DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DC 13 O2 ? ? ? 1_555 B DG 1 N2 ? ? B DC 13 C DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OP1 ? B DG 7 ? C DG 24 ? 1_555 CA ? D CA . ? C CA 201 ? 1_555 OP2 ? B DG 7 ? C DG 24 ? 1_555 54.5 ? 2 OP2 ? B DC 9 ? C DC 26 ? 1_555 CA ? E CA . ? A CA 328 ? 1_555 OP1 ? B DC 9 ? C DC 26 ? 1_555 51.9 ? 3 OP2 ? B DC 9 ? C DC 26 ? 1_555 CA ? E CA . ? A CA 328 ? 1_555 O ? C CYS 233 ? A CYS 241 ? 1_555 133.5 ? 4 OP1 ? B DC 9 ? C DC 26 ? 1_555 CA ? E CA . ? A CA 328 ? 1_555 O ? C CYS 233 ? A CYS 241 ? 1_555 173.5 ? 5 OP2 ? B DC 9 ? C DC 26 ? 1_555 CA ? E CA . ? A CA 328 ? 1_555 O ? C LEU 235 ? A LEU 243 ? 1_555 129.4 ? 6 OP1 ? B DC 9 ? C DC 26 ? 1_555 CA ? E CA . ? A CA 328 ? 1_555 O ? C LEU 235 ? A LEU 243 ? 1_555 83.3 ? 7 O ? C CYS 233 ? A CYS 241 ? 1_555 CA ? E CA . ? A CA 328 ? 1_555 O ? C LEU 235 ? A LEU 243 ? 1_555 93.2 ? 8 OP2 ? B DC 9 ? C DC 26 ? 1_555 CA ? E CA . ? A CA 328 ? 1_555 O ? C VAL 238 ? A VAL 246 ? 1_555 76.6 ? 9 OP1 ? B DC 9 ? C DC 26 ? 1_555 CA ? E CA . ? A CA 328 ? 1_555 O ? C VAL 238 ? A VAL 246 ? 1_555 96.7 ? 10 O ? C CYS 233 ? A CYS 241 ? 1_555 CA ? E CA . ? A CA 328 ? 1_555 O ? C VAL 238 ? A VAL 246 ? 1_555 88.7 ? 11 O ? C LEU 235 ? A LEU 243 ? 1_555 CA ? E CA . ? A CA 328 ? 1_555 O ? C VAL 238 ? A VAL 246 ? 1_555 88.4 ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ALA C 16 ? PRO C 19 ? ALA A 24 PRO A 27 A 2 GLN C 64 ? TYR C 70 ? GLN A 72 TYR A 78 A 3 GLN C 54 ? GLN C 60 ? GLN A 62 GLN A 68 A 4 HIS C 46 ? LEU C 51 ? HIS A 54 LEU A 59 A 5 ARG C 40 ? SER C 43 ? ARG A 48 SER A 51 B 1 ARG C 161 ? LEU C 165 ? ARG A 169 LEU A 173 B 2 VAL C 168 ? HIS C 171 ? VAL A 176 HIS A 179 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE C 18 ? N ILE A 26 O LEU C 65 ? O LEU A 73 A 2 3 O HIS C 66 ? O HIS A 74 N THR C 59 ? N THR A 67 A 3 4 O GLN C 54 ? O GLN A 62 N LEU C 51 ? N LEU A 59 A 4 5 O SER C 48 ? O SER A 56 N ARG C 40 ? N ARG A 48 B 1 2 N LEU C 162 ? N LEU A 170 O TYR C 170 ? O TYR A 178 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software C CA 201 ? 2 'BINDING SITE FOR RESIDUE CA C 201' AC2 Software A CA 328 ? 4 'BINDING SITE FOR RESIDUE CA A 328' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 DA B 5 ? DA C 22 . ? 1_555 ? 2 AC1 2 DG B 7 ? DG C 24 . ? 1_555 ? 3 AC2 4 CYS C 233 ? CYS A 241 . ? 1_555 ? 4 AC2 4 LEU C 235 ? LEU A 243 . ? 1_555 ? 5 AC2 4 VAL C 238 ? VAL A 246 . ? 1_555 ? 6 AC2 4 DC B 9 ? DC C 26 . ? 1_555 ? # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 P B DG 1 ? ? OP3 B DG 1 ? ? 1.521 1.607 -0.086 0.012 N 2 1 P C DG 18 ? ? OP3 C DG 18 ? ? 1.520 1.607 -0.087 0.012 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 CYS A 28 ? ? -166.43 105.63 2 1 PRO A 52 ? ? -30.10 121.64 3 1 LEU A 102 ? ? -59.54 -6.44 4 1 CYS A 149 ? ? 37.03 58.37 5 1 LEU A 170 ? ? -108.00 -81.33 6 1 ASP A 174 ? ? 57.69 -129.77 7 1 ASP A 268 ? ? -125.47 -165.61 # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id B _pdbx_struct_mod_residue.label_comp_id 7GU _pdbx_struct_mod_residue.label_seq_id 6 _pdbx_struct_mod_residue.auth_asym_id C _pdbx_struct_mod_residue.auth_comp_id 7GU _pdbx_struct_mod_residue.auth_seq_id 23 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id DG _pdbx_struct_mod_residue.details ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 80 ? C GLY 72 2 1 Y 1 A ASP 81 ? C ASP 73 3 1 Y 1 A LYS 82 ? C LYS 74 4 1 Y 1 A SER 326 ? C SER 318 5 1 Y 1 A ARG 327 ? C ARG 319 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 7GU P P N N 1 7GU OP1 O N N 2 7GU OP2 O N N 3 7GU "O5'" O N N 4 7GU N9 N Y N 5 7GU C4 C Y N 6 7GU N3 N N N 7 7GU C2 C N N 8 7GU N2 N N N 9 7GU N1 N N N 10 7GU C6 C N N 11 7GU O6 O N N 12 7GU C5 C Y N 13 7GU C7 C Y N 14 7GU C8 C Y N 15 7GU "C2'" C N N 16 7GU "C5'" C N N 17 7GU "C4'" C N R 18 7GU "O4'" O N N 19 7GU "C1'" C N R 20 7GU "C3'" C N S 21 7GU "O3'" O N N 22 7GU OP3 O N N 23 7GU HOP2 H N N 24 7GU HN21 H N N 25 7GU HN22 H N N 26 7GU HN1 H N N 27 7GU H7 H N N 28 7GU H8 H N N 29 7GU "H2'" H N N 30 7GU "H2''" H N N 31 7GU "H5'" H N N 32 7GU "H5''" H N N 33 7GU "H4'" H N N 34 7GU "H1'" H N N 35 7GU "H3'" H N N 36 7GU "HO3'" H N N 37 7GU HOP3 H N N 38 ALA N N N N 39 ALA CA C N S 40 ALA C C N N 41 ALA O O N N 42 ALA CB C N N 43 ALA OXT O N N 44 ALA H H N N 45 ALA H2 H N N 46 ALA HA H N N 47 ALA HB1 H N N 48 ALA HB2 H N N 49 ALA HB3 H N N 50 ALA HXT H N N 51 ARG N N N N 52 ARG CA C N S 53 ARG C C N N 54 ARG O O N N 55 ARG CB C N N 56 ARG CG C N N 57 ARG CD C N N 58 ARG NE N N N 59 ARG CZ C N N 60 ARG NH1 N N N 61 ARG NH2 N N N 62 ARG OXT O N N 63 ARG H H N N 64 ARG H2 H N N 65 ARG HA H N N 66 ARG HB2 H N N 67 ARG HB3 H N N 68 ARG HG2 H N N 69 ARG HG3 H N N 70 ARG HD2 H N N 71 ARG HD3 H N N 72 ARG HE H N N 73 ARG HH11 H N N 74 ARG HH12 H N N 75 ARG HH21 H N N 76 ARG HH22 H N N 77 ARG HXT H N N 78 ASN N N N N 79 ASN CA C N S 80 ASN C C N N 81 ASN O O N N 82 ASN CB C N N 83 ASN CG C N N 84 ASN OD1 O N N 85 ASN ND2 N N N 86 ASN OXT O N N 87 ASN H H N N 88 ASN H2 H N N 89 ASN HA H N N 90 ASN HB2 H N N 91 ASN HB3 H N N 92 ASN HD21 H N N 93 ASN HD22 H N N 94 ASN HXT H N N 95 ASP N N N N 96 ASP CA C N S 97 ASP C C N N 98 ASP O O N N 99 ASP CB C N N 100 ASP CG C N N 101 ASP OD1 O N N 102 ASP OD2 O N N 103 ASP OXT O N N 104 ASP H H N N 105 ASP H2 H N N 106 ASP HA H N N 107 ASP HB2 H N N 108 ASP HB3 H N N 109 ASP HD2 H N N 110 ASP HXT H N N 111 CA CA CA N N 112 CYS N N N N 113 CYS CA C N R 114 CYS C C N N 115 CYS O O N N 116 CYS CB C N N 117 CYS SG S N N 118 CYS OXT O N N 119 CYS H H N N 120 CYS H2 H N N 121 CYS HA H N N 122 CYS HB2 H N N 123 CYS HB3 H N N 124 CYS HG H N N 125 CYS HXT H N N 126 DA OP3 O N N 127 DA P P N N 128 DA OP1 O N N 129 DA OP2 O N N 130 DA "O5'" O N N 131 DA "C5'" C N N 132 DA "C4'" C N R 133 DA "O4'" O N N 134 DA "C3'" C N S 135 DA "O3'" O N N 136 DA "C2'" C N N 137 DA "C1'" C N R 138 DA N9 N Y N 139 DA C8 C Y N 140 DA N7 N Y N 141 DA C5 C Y N 142 DA C6 C Y N 143 DA N6 N N N 144 DA N1 N Y N 145 DA C2 C Y N 146 DA N3 N Y N 147 DA C4 C Y N 148 DA HOP3 H N N 149 DA HOP2 H N N 150 DA "H5'" H N N 151 DA "H5''" H N N 152 DA "H4'" H N N 153 DA "H3'" H N N 154 DA "HO3'" H N N 155 DA "H2'" H N N 156 DA "H2''" H N N 157 DA "H1'" H N N 158 DA H8 H N N 159 DA H61 H N N 160 DA H62 H N N 161 DA H2 H N N 162 DC OP3 O N N 163 DC P P N N 164 DC OP1 O N N 165 DC OP2 O N N 166 DC "O5'" O N N 167 DC "C5'" C N N 168 DC "C4'" C N R 169 DC "O4'" O N N 170 DC "C3'" C N S 171 DC "O3'" O N N 172 DC "C2'" C N N 173 DC "C1'" C N R 174 DC N1 N N N 175 DC C2 C N N 176 DC O2 O N N 177 DC N3 N N N 178 DC C4 C N N 179 DC N4 N N N 180 DC C5 C N N 181 DC C6 C N N 182 DC HOP3 H N N 183 DC HOP2 H N N 184 DC "H5'" H N N 185 DC "H5''" H N N 186 DC "H4'" H N N 187 DC "H3'" H N N 188 DC "HO3'" H N N 189 DC "H2'" H N N 190 DC "H2''" H N N 191 DC "H1'" H N N 192 DC H41 H N N 193 DC H42 H N N 194 DC H5 H N N 195 DC H6 H N N 196 DG OP3 O N N 197 DG P P N N 198 DG OP1 O N N 199 DG OP2 O N N 200 DG "O5'" O N N 201 DG "C5'" C N N 202 DG "C4'" C N R 203 DG "O4'" O N N 204 DG "C3'" C N S 205 DG "O3'" O N N 206 DG "C2'" C N N 207 DG "C1'" C N R 208 DG N9 N Y N 209 DG C8 C Y N 210 DG N7 N Y N 211 DG C5 C Y N 212 DG C6 C N N 213 DG O6 O N N 214 DG N1 N N N 215 DG C2 C N N 216 DG N2 N N N 217 DG N3 N N N 218 DG C4 C Y N 219 DG HOP3 H N N 220 DG HOP2 H N N 221 DG "H5'" H N N 222 DG "H5''" H N N 223 DG "H4'" H N N 224 DG "H3'" H N N 225 DG "HO3'" H N N 226 DG "H2'" H N N 227 DG "H2''" H N N 228 DG "H1'" H N N 229 DG H8 H N N 230 DG H1 H N N 231 DG H21 H N N 232 DG H22 H N N 233 DT OP3 O N N 234 DT P P N N 235 DT OP1 O N N 236 DT OP2 O N N 237 DT "O5'" O N N 238 DT "C5'" C N N 239 DT "C4'" C N R 240 DT "O4'" O N N 241 DT "C3'" C N S 242 DT "O3'" O N N 243 DT "C2'" C N N 244 DT "C1'" C N R 245 DT N1 N N N 246 DT C2 C N N 247 DT O2 O N N 248 DT N3 N N N 249 DT C4 C N N 250 DT O4 O N N 251 DT C5 C N N 252 DT C7 C N N 253 DT C6 C N N 254 DT HOP3 H N N 255 DT HOP2 H N N 256 DT "H5'" H N N 257 DT "H5''" H N N 258 DT "H4'" H N N 259 DT "H3'" H N N 260 DT "HO3'" H N N 261 DT "H2'" H N N 262 DT "H2''" H N N 263 DT "H1'" H N N 264 DT H3 H N N 265 DT H71 H N N 266 DT H72 H N N 267 DT H73 H N N 268 DT H6 H N N 269 GLN N N N N 270 GLN CA C N S 271 GLN C C N N 272 GLN O O N N 273 GLN CB C N N 274 GLN CG C N N 275 GLN CD C N N 276 GLN OE1 O N N 277 GLN NE2 N N N 278 GLN OXT O N N 279 GLN H H N N 280 GLN H2 H N N 281 GLN HA H N N 282 GLN HB2 H N N 283 GLN HB3 H N N 284 GLN HG2 H N N 285 GLN HG3 H N N 286 GLN HE21 H N N 287 GLN HE22 H N N 288 GLN HXT H N N 289 GLU N N N N 290 GLU CA C N S 291 GLU C C N N 292 GLU O O N N 293 GLU CB C N N 294 GLU CG C N N 295 GLU CD C N N 296 GLU OE1 O N N 297 GLU OE2 O N N 298 GLU OXT O N N 299 GLU H H N N 300 GLU H2 H N N 301 GLU HA H N N 302 GLU HB2 H N N 303 GLU HB3 H N N 304 GLU HG2 H N N 305 GLU HG3 H N N 306 GLU HE2 H N N 307 GLU HXT H N N 308 GLY N N N N 309 GLY CA C N N 310 GLY C C N N 311 GLY O O N N 312 GLY OXT O N N 313 GLY H H N N 314 GLY H2 H N N 315 GLY HA2 H N N 316 GLY HA3 H N N 317 GLY HXT H N N 318 HIS N N N N 319 HIS CA C N S 320 HIS C C N N 321 HIS O O N N 322 HIS CB C N N 323 HIS CG C Y N 324 HIS ND1 N Y N 325 HIS CD2 C Y N 326 HIS CE1 C Y N 327 HIS NE2 N Y N 328 HIS OXT O N N 329 HIS H H N N 330 HIS H2 H N N 331 HIS HA H N N 332 HIS HB2 H N N 333 HIS HB3 H N N 334 HIS HD1 H N N 335 HIS HD2 H N N 336 HIS HE1 H N N 337 HIS HE2 H N N 338 HIS HXT H N N 339 HOH O O N N 340 HOH H1 H N N 341 HOH H2 H N N 342 ILE N N N N 343 ILE CA C N S 344 ILE C C N N 345 ILE O O N N 346 ILE CB C N S 347 ILE CG1 C N N 348 ILE CG2 C N N 349 ILE CD1 C N N 350 ILE OXT O N N 351 ILE H H N N 352 ILE H2 H N N 353 ILE HA H N N 354 ILE HB H N N 355 ILE HG12 H N N 356 ILE HG13 H N N 357 ILE HG21 H N N 358 ILE HG22 H N N 359 ILE HG23 H N N 360 ILE HD11 H N N 361 ILE HD12 H N N 362 ILE HD13 H N N 363 ILE HXT H N N 364 LEU N N N N 365 LEU CA C N S 366 LEU C C N N 367 LEU O O N N 368 LEU CB C N N 369 LEU CG C N N 370 LEU CD1 C N N 371 LEU CD2 C N N 372 LEU OXT O N N 373 LEU H H N N 374 LEU H2 H N N 375 LEU HA H N N 376 LEU HB2 H N N 377 LEU HB3 H N N 378 LEU HG H N N 379 LEU HD11 H N N 380 LEU HD12 H N N 381 LEU HD13 H N N 382 LEU HD21 H N N 383 LEU HD22 H N N 384 LEU HD23 H N N 385 LEU HXT H N N 386 LYS N N N N 387 LYS CA C N S 388 LYS C C N N 389 LYS O O N N 390 LYS CB C N N 391 LYS CG C N N 392 LYS CD C N N 393 LYS CE C N N 394 LYS NZ N N N 395 LYS OXT O N N 396 LYS H H N N 397 LYS H2 H N N 398 LYS HA H N N 399 LYS HB2 H N N 400 LYS HB3 H N N 401 LYS HG2 H N N 402 LYS HG3 H N N 403 LYS HD2 H N N 404 LYS HD3 H N N 405 LYS HE2 H N N 406 LYS HE3 H N N 407 LYS HZ1 H N N 408 LYS HZ2 H N N 409 LYS HZ3 H N N 410 LYS HXT H N N 411 MET N N N N 412 MET CA C N S 413 MET C C N N 414 MET O O N N 415 MET CB C N N 416 MET CG C N N 417 MET SD S N N 418 MET CE C N N 419 MET OXT O N N 420 MET H H N N 421 MET H2 H N N 422 MET HA H N N 423 MET HB2 H N N 424 MET HB3 H N N 425 MET HG2 H N N 426 MET HG3 H N N 427 MET HE1 H N N 428 MET HE2 H N N 429 MET HE3 H N N 430 MET HXT H N N 431 PHE N N N N 432 PHE CA C N S 433 PHE C C N N 434 PHE O O N N 435 PHE CB C N N 436 PHE CG C Y N 437 PHE CD1 C Y N 438 PHE CD2 C Y N 439 PHE CE1 C Y N 440 PHE CE2 C Y N 441 PHE CZ C Y N 442 PHE OXT O N N 443 PHE H H N N 444 PHE H2 H N N 445 PHE HA H N N 446 PHE HB2 H N N 447 PHE HB3 H N N 448 PHE HD1 H N N 449 PHE HD2 H N N 450 PHE HE1 H N N 451 PHE HE2 H N N 452 PHE HZ H N N 453 PHE HXT H N N 454 PRO N N N N 455 PRO CA C N S 456 PRO C C N N 457 PRO O O N N 458 PRO CB C N N 459 PRO CG C N N 460 PRO CD C N N 461 PRO OXT O N N 462 PRO H H N N 463 PRO HA H N N 464 PRO HB2 H N N 465 PRO HB3 H N N 466 PRO HG2 H N N 467 PRO HG3 H N N 468 PRO HD2 H N N 469 PRO HD3 H N N 470 PRO HXT H N N 471 SER N N N N 472 SER CA C N S 473 SER C C N N 474 SER O O N N 475 SER CB C N N 476 SER OG O N N 477 SER OXT O N N 478 SER H H N N 479 SER H2 H N N 480 SER HA H N N 481 SER HB2 H N N 482 SER HB3 H N N 483 SER HG H N N 484 SER HXT H N N 485 THR N N N N 486 THR CA C N S 487 THR C C N N 488 THR O O N N 489 THR CB C N R 490 THR OG1 O N N 491 THR CG2 C N N 492 THR OXT O N N 493 THR H H N N 494 THR H2 H N N 495 THR HA H N N 496 THR HB H N N 497 THR HG1 H N N 498 THR HG21 H N N 499 THR HG22 H N N 500 THR HG23 H N N 501 THR HXT H N N 502 TRP N N N N 503 TRP CA C N S 504 TRP C C N N 505 TRP O O N N 506 TRP CB C N N 507 TRP CG C Y N 508 TRP CD1 C Y N 509 TRP CD2 C Y N 510 TRP NE1 N Y N 511 TRP CE2 C Y N 512 TRP CE3 C Y N 513 TRP CZ2 C Y N 514 TRP CZ3 C Y N 515 TRP CH2 C Y N 516 TRP OXT O N N 517 TRP H H N N 518 TRP H2 H N N 519 TRP HA H N N 520 TRP HB2 H N N 521 TRP HB3 H N N 522 TRP HD1 H N N 523 TRP HE1 H N N 524 TRP HE3 H N N 525 TRP HZ2 H N N 526 TRP HZ3 H N N 527 TRP HH2 H N N 528 TRP HXT H N N 529 TYR N N N N 530 TYR CA C N S 531 TYR C C N N 532 TYR O O N N 533 TYR CB C N N 534 TYR CG C Y N 535 TYR CD1 C Y N 536 TYR CD2 C Y N 537 TYR CE1 C Y N 538 TYR CE2 C Y N 539 TYR CZ C Y N 540 TYR OH O N N 541 TYR OXT O N N 542 TYR H H N N 543 TYR H2 H N N 544 TYR HA H N N 545 TYR HB2 H N N 546 TYR HB3 H N N 547 TYR HD1 H N N 548 TYR HD2 H N N 549 TYR HE1 H N N 550 TYR HE2 H N N 551 TYR HH H N N 552 TYR HXT H N N 553 VAL N N N N 554 VAL CA C N S 555 VAL C C N N 556 VAL O O N N 557 VAL CB C N N 558 VAL CG1 C N N 559 VAL CG2 C N N 560 VAL OXT O N N 561 VAL H H N N 562 VAL H2 H N N 563 VAL HA H N N 564 VAL HB H N N 565 VAL HG11 H N N 566 VAL HG12 H N N 567 VAL HG13 H N N 568 VAL HG21 H N N 569 VAL HG22 H N N 570 VAL HG23 H N N 571 VAL HXT H N N 572 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 7GU P OP1 doub N N 1 7GU P OP2 sing N N 2 7GU P "O5'" sing N N 3 7GU P OP3 sing N N 4 7GU OP2 HOP2 sing N N 5 7GU "O5'" "C5'" sing N N 6 7GU N9 C4 sing Y N 7 7GU N9 C8 sing Y N 8 7GU N9 "C1'" sing N N 9 7GU C4 N3 sing N N 10 7GU C4 C5 doub Y N 11 7GU N3 C2 doub N N 12 7GU C2 N2 sing N N 13 7GU C2 N1 sing N N 14 7GU N2 HN21 sing N N 15 7GU N2 HN22 sing N N 16 7GU N1 C6 sing N N 17 7GU N1 HN1 sing N N 18 7GU C6 O6 doub N N 19 7GU C6 C5 sing N N 20 7GU C5 C7 sing Y N 21 7GU C7 C8 doub Y N 22 7GU C7 H7 sing N N 23 7GU C8 H8 sing N N 24 7GU "C2'" "C1'" sing N N 25 7GU "C2'" "C3'" sing N N 26 7GU "C2'" "H2'" sing N N 27 7GU "C2'" "H2''" sing N N 28 7GU "C5'" "C4'" sing N N 29 7GU "C5'" "H5'" sing N N 30 7GU "C5'" "H5''" sing N N 31 7GU "C4'" "O4'" sing N N 32 7GU "C4'" "C3'" sing N N 33 7GU "C4'" "H4'" sing N N 34 7GU "O4'" "C1'" sing N N 35 7GU "C1'" "H1'" sing N N 36 7GU "C3'" "O3'" sing N N 37 7GU "C3'" "H3'" sing N N 38 7GU "O3'" "HO3'" sing N N 39 7GU OP3 HOP3 sing N N 40 ALA N CA sing N N 41 ALA N H sing N N 42 ALA N H2 sing N N 43 ALA CA C sing N N 44 ALA CA CB sing N N 45 ALA CA HA sing N N 46 ALA C O doub N N 47 ALA C OXT sing N N 48 ALA CB HB1 sing N N 49 ALA CB HB2 sing N N 50 ALA CB HB3 sing N N 51 ALA OXT HXT sing N N 52 ARG N CA sing N N 53 ARG N H sing N N 54 ARG N H2 sing N N 55 ARG CA C sing N N 56 ARG CA CB sing N N 57 ARG CA HA sing N N 58 ARG C O doub N N 59 ARG C OXT sing N N 60 ARG CB CG sing N N 61 ARG CB HB2 sing N N 62 ARG CB HB3 sing N N 63 ARG CG CD sing N N 64 ARG CG HG2 sing N N 65 ARG CG HG3 sing N N 66 ARG CD NE sing N N 67 ARG CD HD2 sing N N 68 ARG CD HD3 sing N N 69 ARG NE CZ sing N N 70 ARG NE HE sing N N 71 ARG CZ NH1 sing N N 72 ARG CZ NH2 doub N N 73 ARG NH1 HH11 sing N N 74 ARG NH1 HH12 sing N N 75 ARG NH2 HH21 sing N N 76 ARG NH2 HH22 sing N N 77 ARG OXT HXT sing N N 78 ASN N CA sing N N 79 ASN N H sing N N 80 ASN N H2 sing N N 81 ASN CA C sing N N 82 ASN CA CB sing N N 83 ASN CA HA sing N N 84 ASN C O doub N N 85 ASN C OXT sing N N 86 ASN CB CG sing N N 87 ASN CB HB2 sing N N 88 ASN CB HB3 sing N N 89 ASN CG OD1 doub N N 90 ASN CG ND2 sing N N 91 ASN ND2 HD21 sing N N 92 ASN ND2 HD22 sing N N 93 ASN OXT HXT sing N N 94 ASP N CA sing N N 95 ASP N H sing N N 96 ASP N H2 sing N N 97 ASP CA C sing N N 98 ASP CA CB sing N N 99 ASP CA HA sing N N 100 ASP C O doub N N 101 ASP C OXT sing N N 102 ASP CB CG sing N N 103 ASP CB HB2 sing N N 104 ASP CB HB3 sing N N 105 ASP CG OD1 doub N N 106 ASP CG OD2 sing N N 107 ASP OD2 HD2 sing N N 108 ASP OXT HXT sing N N 109 CYS N CA sing N N 110 CYS N H sing N N 111 CYS N H2 sing N N 112 CYS CA C sing N N 113 CYS CA CB sing N N 114 CYS CA HA sing N N 115 CYS C O doub N N 116 CYS C OXT sing N N 117 CYS CB SG sing N N 118 CYS CB HB2 sing N N 119 CYS CB HB3 sing N N 120 CYS SG HG sing N N 121 CYS OXT HXT sing N N 122 DA OP3 P sing N N 123 DA OP3 HOP3 sing N N 124 DA P OP1 doub N N 125 DA P OP2 sing N N 126 DA P "O5'" sing N N 127 DA OP2 HOP2 sing N N 128 DA "O5'" "C5'" sing N N 129 DA "C5'" "C4'" sing N N 130 DA "C5'" "H5'" sing N N 131 DA "C5'" "H5''" sing N N 132 DA "C4'" "O4'" sing N N 133 DA "C4'" "C3'" sing N N 134 DA "C4'" "H4'" sing N N 135 DA "O4'" "C1'" sing N N 136 DA "C3'" "O3'" sing N N 137 DA "C3'" "C2'" sing N N 138 DA "C3'" "H3'" sing N N 139 DA "O3'" "HO3'" sing N N 140 DA "C2'" "C1'" sing N N 141 DA "C2'" "H2'" sing N N 142 DA "C2'" "H2''" sing N N 143 DA "C1'" N9 sing N N 144 DA "C1'" "H1'" sing N N 145 DA N9 C8 sing Y N 146 DA N9 C4 sing Y N 147 DA C8 N7 doub Y N 148 DA C8 H8 sing N N 149 DA N7 C5 sing Y N 150 DA C5 C6 sing Y N 151 DA C5 C4 doub Y N 152 DA C6 N6 sing N N 153 DA C6 N1 doub Y N 154 DA N6 H61 sing N N 155 DA N6 H62 sing N N 156 DA N1 C2 sing Y N 157 DA C2 N3 doub Y N 158 DA C2 H2 sing N N 159 DA N3 C4 sing Y N 160 DC OP3 P sing N N 161 DC OP3 HOP3 sing N N 162 DC P OP1 doub N N 163 DC P OP2 sing N N 164 DC P "O5'" sing N N 165 DC OP2 HOP2 sing N N 166 DC "O5'" "C5'" sing N N 167 DC "C5'" "C4'" sing N N 168 DC "C5'" "H5'" sing N N 169 DC "C5'" "H5''" sing N N 170 DC "C4'" "O4'" sing N N 171 DC "C4'" "C3'" sing N N 172 DC "C4'" "H4'" sing N N 173 DC "O4'" "C1'" sing N N 174 DC "C3'" "O3'" sing N N 175 DC "C3'" "C2'" sing N N 176 DC "C3'" "H3'" sing N N 177 DC "O3'" "HO3'" sing N N 178 DC "C2'" "C1'" sing N N 179 DC "C2'" "H2'" sing N N 180 DC "C2'" "H2''" sing N N 181 DC "C1'" N1 sing N N 182 DC "C1'" "H1'" sing N N 183 DC N1 C2 sing N N 184 DC N1 C6 sing N N 185 DC C2 O2 doub N N 186 DC C2 N3 sing N N 187 DC N3 C4 doub N N 188 DC C4 N4 sing N N 189 DC C4 C5 sing N N 190 DC N4 H41 sing N N 191 DC N4 H42 sing N N 192 DC C5 C6 doub N N 193 DC C5 H5 sing N N 194 DC C6 H6 sing N N 195 DG OP3 P sing N N 196 DG OP3 HOP3 sing N N 197 DG P OP1 doub N N 198 DG P OP2 sing N N 199 DG P "O5'" sing N N 200 DG OP2 HOP2 sing N N 201 DG "O5'" "C5'" sing N N 202 DG "C5'" "C4'" sing N N 203 DG "C5'" "H5'" sing N N 204 DG "C5'" "H5''" sing N N 205 DG "C4'" "O4'" sing N N 206 DG "C4'" "C3'" sing N N 207 DG "C4'" "H4'" sing N N 208 DG "O4'" "C1'" sing N N 209 DG "C3'" "O3'" sing N N 210 DG "C3'" "C2'" sing N N 211 DG "C3'" "H3'" sing N N 212 DG "O3'" "HO3'" sing N N 213 DG "C2'" "C1'" sing N N 214 DG "C2'" "H2'" sing N N 215 DG "C2'" "H2''" sing N N 216 DG "C1'" N9 sing N N 217 DG "C1'" "H1'" sing N N 218 DG N9 C8 sing Y N 219 DG N9 C4 sing Y N 220 DG C8 N7 doub Y N 221 DG C8 H8 sing N N 222 DG N7 C5 sing Y N 223 DG C5 C6 sing N N 224 DG C5 C4 doub Y N 225 DG C6 O6 doub N N 226 DG C6 N1 sing N N 227 DG N1 C2 sing N N 228 DG N1 H1 sing N N 229 DG C2 N2 sing N N 230 DG C2 N3 doub N N 231 DG N2 H21 sing N N 232 DG N2 H22 sing N N 233 DG N3 C4 sing N N 234 DT OP3 P sing N N 235 DT OP3 HOP3 sing N N 236 DT P OP1 doub N N 237 DT P OP2 sing N N 238 DT P "O5'" sing N N 239 DT OP2 HOP2 sing N N 240 DT "O5'" "C5'" sing N N 241 DT "C5'" "C4'" sing N N 242 DT "C5'" "H5'" sing N N 243 DT "C5'" "H5''" sing N N 244 DT "C4'" "O4'" sing N N 245 DT "C4'" "C3'" sing N N 246 DT "C4'" "H4'" sing N N 247 DT "O4'" "C1'" sing N N 248 DT "C3'" "O3'" sing N N 249 DT "C3'" "C2'" sing N N 250 DT "C3'" "H3'" sing N N 251 DT "O3'" "HO3'" sing N N 252 DT "C2'" "C1'" sing N N 253 DT "C2'" "H2'" sing N N 254 DT "C2'" "H2''" sing N N 255 DT "C1'" N1 sing N N 256 DT "C1'" "H1'" sing N N 257 DT N1 C2 sing N N 258 DT N1 C6 sing N N 259 DT C2 O2 doub N N 260 DT C2 N3 sing N N 261 DT N3 C4 sing N N 262 DT N3 H3 sing N N 263 DT C4 O4 doub N N 264 DT C4 C5 sing N N 265 DT C5 C7 sing N N 266 DT C5 C6 doub N N 267 DT C7 H71 sing N N 268 DT C7 H72 sing N N 269 DT C7 H73 sing N N 270 DT C6 H6 sing N N 271 GLN N CA sing N N 272 GLN N H sing N N 273 GLN N H2 sing N N 274 GLN CA C sing N N 275 GLN CA CB sing N N 276 GLN CA HA sing N N 277 GLN C O doub N N 278 GLN C OXT sing N N 279 GLN CB CG sing N N 280 GLN CB HB2 sing N N 281 GLN CB HB3 sing N N 282 GLN CG CD sing N N 283 GLN CG HG2 sing N N 284 GLN CG HG3 sing N N 285 GLN CD OE1 doub N N 286 GLN CD NE2 sing N N 287 GLN NE2 HE21 sing N N 288 GLN NE2 HE22 sing N N 289 GLN OXT HXT sing N N 290 GLU N CA sing N N 291 GLU N H sing N N 292 GLU N H2 sing N N 293 GLU CA C sing N N 294 GLU CA CB sing N N 295 GLU CA HA sing N N 296 GLU C O doub N N 297 GLU C OXT sing N N 298 GLU CB CG sing N N 299 GLU CB HB2 sing N N 300 GLU CB HB3 sing N N 301 GLU CG CD sing N N 302 GLU CG HG2 sing N N 303 GLU CG HG3 sing N N 304 GLU CD OE1 doub N N 305 GLU CD OE2 sing N N 306 GLU OE2 HE2 sing N N 307 GLU OXT HXT sing N N 308 GLY N CA sing N N 309 GLY N H sing N N 310 GLY N H2 sing N N 311 GLY CA C sing N N 312 GLY CA HA2 sing N N 313 GLY CA HA3 sing N N 314 GLY C O doub N N 315 GLY C OXT sing N N 316 GLY OXT HXT sing N N 317 HIS N CA sing N N 318 HIS N H sing N N 319 HIS N H2 sing N N 320 HIS CA C sing N N 321 HIS CA CB sing N N 322 HIS CA HA sing N N 323 HIS C O doub N N 324 HIS C OXT sing N N 325 HIS CB CG sing N N 326 HIS CB HB2 sing N N 327 HIS CB HB3 sing N N 328 HIS CG ND1 sing Y N 329 HIS CG CD2 doub Y N 330 HIS ND1 CE1 doub Y N 331 HIS ND1 HD1 sing N N 332 HIS CD2 NE2 sing Y N 333 HIS CD2 HD2 sing N N 334 HIS CE1 NE2 sing Y N 335 HIS CE1 HE1 sing N N 336 HIS NE2 HE2 sing N N 337 HIS OXT HXT sing N N 338 HOH O H1 sing N N 339 HOH O H2 sing N N 340 ILE N CA sing N N 341 ILE N H sing N N 342 ILE N H2 sing N N 343 ILE CA C sing N N 344 ILE CA CB sing N N 345 ILE CA HA sing N N 346 ILE C O doub N N 347 ILE C OXT sing N N 348 ILE CB CG1 sing N N 349 ILE CB CG2 sing N N 350 ILE CB HB sing N N 351 ILE CG1 CD1 sing N N 352 ILE CG1 HG12 sing N N 353 ILE CG1 HG13 sing N N 354 ILE CG2 HG21 sing N N 355 ILE CG2 HG22 sing N N 356 ILE CG2 HG23 sing N N 357 ILE CD1 HD11 sing N N 358 ILE CD1 HD12 sing N N 359 ILE CD1 HD13 sing N N 360 ILE OXT HXT sing N N 361 LEU N CA sing N N 362 LEU N H sing N N 363 LEU N H2 sing N N 364 LEU CA C sing N N 365 LEU CA CB sing N N 366 LEU CA HA sing N N 367 LEU C O doub N N 368 LEU C OXT sing N N 369 LEU CB CG sing N N 370 LEU CB HB2 sing N N 371 LEU CB HB3 sing N N 372 LEU CG CD1 sing N N 373 LEU CG CD2 sing N N 374 LEU CG HG sing N N 375 LEU CD1 HD11 sing N N 376 LEU CD1 HD12 sing N N 377 LEU CD1 HD13 sing N N 378 LEU CD2 HD21 sing N N 379 LEU CD2 HD22 sing N N 380 LEU CD2 HD23 sing N N 381 LEU OXT HXT sing N N 382 LYS N CA sing N N 383 LYS N H sing N N 384 LYS N H2 sing N N 385 LYS CA C sing N N 386 LYS CA CB sing N N 387 LYS CA HA sing N N 388 LYS C O doub N N 389 LYS C OXT sing N N 390 LYS CB CG sing N N 391 LYS CB HB2 sing N N 392 LYS CB HB3 sing N N 393 LYS CG CD sing N N 394 LYS CG HG2 sing N N 395 LYS CG HG3 sing N N 396 LYS CD CE sing N N 397 LYS CD HD2 sing N N 398 LYS CD HD3 sing N N 399 LYS CE NZ sing N N 400 LYS CE HE2 sing N N 401 LYS CE HE3 sing N N 402 LYS NZ HZ1 sing N N 403 LYS NZ HZ2 sing N N 404 LYS NZ HZ3 sing N N 405 LYS OXT HXT sing N N 406 MET N CA sing N N 407 MET N H sing N N 408 MET N H2 sing N N 409 MET CA C sing N N 410 MET CA CB sing N N 411 MET CA HA sing N N 412 MET C O doub N N 413 MET C OXT sing N N 414 MET CB CG sing N N 415 MET CB HB2 sing N N 416 MET CB HB3 sing N N 417 MET CG SD sing N N 418 MET CG HG2 sing N N 419 MET CG HG3 sing N N 420 MET SD CE sing N N 421 MET CE HE1 sing N N 422 MET CE HE2 sing N N 423 MET CE HE3 sing N N 424 MET OXT HXT sing N N 425 PHE N CA sing N N 426 PHE N H sing N N 427 PHE N H2 sing N N 428 PHE CA C sing N N 429 PHE CA CB sing N N 430 PHE CA HA sing N N 431 PHE C O doub N N 432 PHE C OXT sing N N 433 PHE CB CG sing N N 434 PHE CB HB2 sing N N 435 PHE CB HB3 sing N N 436 PHE CG CD1 doub Y N 437 PHE CG CD2 sing Y N 438 PHE CD1 CE1 sing Y N 439 PHE CD1 HD1 sing N N 440 PHE CD2 CE2 doub Y N 441 PHE CD2 HD2 sing N N 442 PHE CE1 CZ doub Y N 443 PHE CE1 HE1 sing N N 444 PHE CE2 CZ sing Y N 445 PHE CE2 HE2 sing N N 446 PHE CZ HZ sing N N 447 PHE OXT HXT sing N N 448 PRO N CA sing N N 449 PRO N CD sing N N 450 PRO N H sing N N 451 PRO CA C sing N N 452 PRO CA CB sing N N 453 PRO CA HA sing N N 454 PRO C O doub N N 455 PRO C OXT sing N N 456 PRO CB CG sing N N 457 PRO CB HB2 sing N N 458 PRO CB HB3 sing N N 459 PRO CG CD sing N N 460 PRO CG HG2 sing N N 461 PRO CG HG3 sing N N 462 PRO CD HD2 sing N N 463 PRO CD HD3 sing N N 464 PRO OXT HXT sing N N 465 SER N CA sing N N 466 SER N H sing N N 467 SER N H2 sing N N 468 SER CA C sing N N 469 SER CA CB sing N N 470 SER CA HA sing N N 471 SER C O doub N N 472 SER C OXT sing N N 473 SER CB OG sing N N 474 SER CB HB2 sing N N 475 SER CB HB3 sing N N 476 SER OG HG sing N N 477 SER OXT HXT sing N N 478 THR N CA sing N N 479 THR N H sing N N 480 THR N H2 sing N N 481 THR CA C sing N N 482 THR CA CB sing N N 483 THR CA HA sing N N 484 THR C O doub N N 485 THR C OXT sing N N 486 THR CB OG1 sing N N 487 THR CB CG2 sing N N 488 THR CB HB sing N N 489 THR OG1 HG1 sing N N 490 THR CG2 HG21 sing N N 491 THR CG2 HG22 sing N N 492 THR CG2 HG23 sing N N 493 THR OXT HXT sing N N 494 TRP N CA sing N N 495 TRP N H sing N N 496 TRP N H2 sing N N 497 TRP CA C sing N N 498 TRP CA CB sing N N 499 TRP CA HA sing N N 500 TRP C O doub N N 501 TRP C OXT sing N N 502 TRP CB CG sing N N 503 TRP CB HB2 sing N N 504 TRP CB HB3 sing N N 505 TRP CG CD1 doub Y N 506 TRP CG CD2 sing Y N 507 TRP CD1 NE1 sing Y N 508 TRP CD1 HD1 sing N N 509 TRP CD2 CE2 doub Y N 510 TRP CD2 CE3 sing Y N 511 TRP NE1 CE2 sing Y N 512 TRP NE1 HE1 sing N N 513 TRP CE2 CZ2 sing Y N 514 TRP CE3 CZ3 doub Y N 515 TRP CE3 HE3 sing N N 516 TRP CZ2 CH2 doub Y N 517 TRP CZ2 HZ2 sing N N 518 TRP CZ3 CH2 sing Y N 519 TRP CZ3 HZ3 sing N N 520 TRP CH2 HH2 sing N N 521 TRP OXT HXT sing N N 522 TYR N CA sing N N 523 TYR N H sing N N 524 TYR N H2 sing N N 525 TYR CA C sing N N 526 TYR CA CB sing N N 527 TYR CA HA sing N N 528 TYR C O doub N N 529 TYR C OXT sing N N 530 TYR CB CG sing N N 531 TYR CB HB2 sing N N 532 TYR CB HB3 sing N N 533 TYR CG CD1 doub Y N 534 TYR CG CD2 sing Y N 535 TYR CD1 CE1 sing Y N 536 TYR CD1 HD1 sing N N 537 TYR CD2 CE2 doub Y N 538 TYR CD2 HD2 sing N N 539 TYR CE1 CZ doub Y N 540 TYR CE1 HE1 sing N N 541 TYR CE2 CZ sing Y N 542 TYR CE2 HE2 sing N N 543 TYR CZ OH sing N N 544 TYR OH HH sing N N 545 TYR OXT HXT sing N N 546 VAL N CA sing N N 547 VAL N H sing N N 548 VAL N H2 sing N N 549 VAL CA C sing N N 550 VAL CA CB sing N N 551 VAL CA HA sing N N 552 VAL C O doub N N 553 VAL C OXT sing N N 554 VAL CB CG1 sing N N 555 VAL CB CG2 sing N N 556 VAL CB HB sing N N 557 VAL CG1 HG11 sing N N 558 VAL CG1 HG12 sing N N 559 VAL CG1 HG13 sing N N 560 VAL CG2 HG21 sing N N 561 VAL CG2 HG22 sing N N 562 VAL CG2 HG23 sing N N 563 VAL OXT HXT sing N N 564 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1YQM 'b-form double helix' 1YQM 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 2 1_555 B DC 12 1_555 0.335 0.213 -0.406 -13.275 8.149 -2.877 1 B_DG2:DC29_C B 2 ? C 29 ? 19 1 1 A DT 3 1_555 B DA 11 1_555 0.262 -0.149 0.361 -5.446 -15.983 1.344 2 B_DT3:DA28_C B 3 ? C 28 ? 20 1 1 A DA 4 1_555 B DT 10 1_555 -0.851 0.010 -0.108 -11.396 -7.167 -1.021 3 B_DA4:DT27_C B 4 ? C 27 ? 20 1 1 A DG 5 1_555 B DC 9 1_555 -0.254 -0.231 -0.246 0.828 -10.912 -1.802 4 B_DG5:DC26_C B 5 ? C 26 ? 19 1 1 A DA 6 1_555 B DT 8 1_555 0.102 0.019 0.120 0.170 -6.996 -2.057 5 B_DA6:DT25_C B 6 ? C 25 ? 20 1 1 A DC 7 1_555 B DG 7 1_555 0.225 -0.026 -0.483 16.238 -3.451 -3.021 6 B_DC7:DG24_C B 7 ? C 24 ? 19 1 1 A DT 9 1_555 B DA 5 1_555 -0.035 -0.043 -0.044 -7.067 3.241 2.525 7 B_DT9:DA22_C B 9 ? C 22 ? 20 1 1 A DG 10 1_555 B DC 4 1_555 -0.414 0.026 0.080 4.771 -6.579 2.032 8 B_DG10:DC21_C B 10 ? C 21 ? 19 1 1 A DG 11 1_555 B DC 3 1_555 0.546 0.258 0.002 6.298 -14.324 9.472 9 B_DG11:DC20_C B 11 ? C 20 ? ? 1 1 A DA 12 1_555 B DT 2 1_555 1.210 -0.027 0.026 -7.181 -10.670 0.504 10 B_DA12:DT19_C B 12 ? C 19 ? 20 1 1 A DC 13 1_555 B DG 1 1_555 -1.057 -0.009 -0.020 4.254 7.009 -5.712 11 B_DC13:DG18_C B 13 ? C 18 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 2 1_555 B DC 12 1_555 A DT 3 1_555 B DA 11 1_555 -0.145 -0.665 3.371 -3.301 0.570 35.141 -1.183 -0.264 3.359 0.941 5.452 35.295 1 BB_DG2DT3:DA28DC29_CC B 2 ? C 29 ? B 3 ? C 28 ? 1 A DT 3 1_555 B DA 11 1_555 A DA 4 1_555 B DT 10 1_555 -0.232 1.224 3.428 1.653 -4.370 39.252 2.338 0.543 3.266 -6.477 -2.450 39.518 2 BB_DT3DA4:DT27DA28_CC B 3 ? C 28 ? B 4 ? C 27 ? 1 A DA 4 1_555 B DT 10 1_555 A DG 5 1_555 B DC 9 1_555 -0.329 0.207 3.183 -0.391 5.174 33.357 -0.465 0.505 3.181 8.947 0.676 33.747 3 BB_DA4DG5:DC26DT27_CC B 4 ? C 27 ? B 5 ? C 26 ? 1 A DG 5 1_555 B DC 9 1_555 A DA 6 1_555 B DT 8 1_555 -0.379 0.018 3.236 -4.372 3.487 38.533 -0.394 0.041 3.248 5.250 6.583 38.921 4 BB_DG5DA6:DT25DC26_CC B 5 ? C 26 ? B 6 ? C 25 ? 1 A DA 6 1_555 B DT 8 1_555 A DC 7 1_555 B DG 7 1_555 0.394 -0.359 2.913 6.622 0.322 30.289 -0.728 0.416 2.927 0.606 -12.485 30.989 5 BB_DA6DC7:DG24DT25_CC B 6 ? C 25 ? B 7 ? C 24 ? 1 A DT 9 1_555 B DA 5 1_555 A DG 10 1_555 B DC 4 1_555 -0.087 1.528 3.136 -2.256 -2.469 36.845 2.722 -0.150 3.031 -3.896 3.561 36.991 6 BB_DT9DG10:DC21DA22_CC B 9 ? C 22 ? B 10 ? C 21 ? 1 A DG 10 1_555 B DC 4 1_555 A DG 11 1_555 B DC 3 1_555 0.299 -0.047 3.295 0.334 6.885 35.914 -1.032 -0.430 3.234 11.040 -0.536 36.548 7 BB_DG10DG11:DC20DC21_CC B 10 ? C 21 ? B 11 ? C 20 ? 1 A DG 11 1_555 B DC 3 1_555 A DA 12 1_555 B DT 2 1_555 -0.673 -0.245 3.566 -3.075 2.996 42.134 -0.674 0.588 3.579 4.154 4.263 42.342 8 BB_DG11DA12:DT19DC20_CC B 11 ? C 20 ? B 12 ? C 19 ? 1 A DA 12 1_555 B DT 2 1_555 A DC 13 1_555 B DG 1 1_555 -0.797 0.112 3.068 -2.152 -3.740 33.603 0.760 1.040 3.082 -6.435 3.704 33.871 9 BB_DA12DC13:DG18DT19_CC B 12 ? C 19 ? B 13 ? C 18 ? # _atom_sites.entry_id 1YQM _atom_sites.fract_transf_matrix[1][1] 0.010810 _atom_sites.fract_transf_matrix[1][2] 0.006241 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012482 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004747 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA N O P S # loop_