data_226D # _entry.id 226D # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 226D pdb_0000226d 10.2210/pdb226d/pdb WWPDB D_1000177602 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1996-01-29 2 'Structure model' 1 1 2008-03-03 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-09 5 'Structure model' 1 4 2024-03-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' Other 7 5 'Structure model' 'Data collection' 8 5 'Structure model' 'Source and taxonomy' 9 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_database_status 3 4 'Structure model' pdbx_nmr_software 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_site 7 5 'Structure model' chem_comp_atom 8 5 'Structure model' chem_comp_bond 9 5 'Structure model' entity 10 5 'Structure model' pdbx_entity_src_syn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_database_status.process_site' 4 4 'Structure model' '_pdbx_nmr_software.name' 5 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 4 'Structure model' '_struct_site.pdbx_auth_seq_id' 8 5 'Structure model' '_entity.details' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 226D _pdbx_database_status.recvd_initial_deposition_date 1995-07-19 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Thompson, A.S.' 1 'Hurley, L.H.' 2 # _citation.id primary _citation.title 'Solution conformation of a bizelesin A-tract duplex adduct: DNA-DNA cross-linking of an A-tract straightens out bent DNA.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 252 _citation.page_first 86 _citation.page_last 101 _citation.year 1995 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 7666436 _citation.pdbx_database_id_DOI 10.1006/jmbi.1994.0477 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Thompson, A.S.' 1 ? primary 'Hurley, L.H.' 2 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*CP*GP*TP*TP*TP*TP*TP*AP*CP*G)-3') ; 3025.989 1 ? ? ? ? 2 polymer syn ;DNA (5'-D(*CP*GP*TP*AP*AP*AP*AP*AP*CP*G)-3') ; 3062.045 1 ? ? ? ? 3 non-polymer syn BIZELESIN 746.812 1 ? ? ? 'CHEMICALLY SYNTHESIZED' # loop_ _entity_keywords.entity_id _entity_keywords.text 1 'DEOXYRIBONUCLEIC ACID' 2 'DEOXYRIBONUCLEIC ACID' # _entity_name_com.entity_id 3 _entity_name_com.name BIZELESIN # _entity_name_sys.entity_id 3 _entity_name_sys.name ;6,6'-{CARBONYLBIS(IMINO-1H-INDOLE-5,2-DIYLCARBONYL)}BIS{8-(CHLOROMETHYL)-3,6,7,8-TETRAHYDRO-1-METHYL-BENZO{1,2-B,4,3-B'}DIPYRROL-4-OL{S-(R*,R*)} ; # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DC)(DG)(DT)(DT)(DT)(DT)(DT)(DA)(DC)(DG)' CGTTTTTACG A ? 2 polydeoxyribonucleotide no no '(DC)(DG)(DT)(DA)(DA)(DA)(DA)(DA)(DC)(DG)' CGTAAAAACG B ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name BIZELESIN _pdbx_entity_nonpoly.comp_id BIZ # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DG n 1 3 DT n 1 4 DT n 1 5 DT n 1 6 DT n 1 7 DT n 1 8 DA n 1 9 DC n 1 10 DG n 2 1 DC n 2 2 DG n 2 3 DT n 2 4 DA n 2 5 DA n 2 6 DA n 2 7 DA n 2 8 DA n 2 9 DC n 2 10 DG n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample ? ? ? ? ? 'CHEMICALLY SYNTHESIZED' 2 1 sample ? ? ? ? ? 'CHEMICALLY SYNTHESIZED' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight BIZ non-polymer . BIZELESIN ? 'C43 H38 N8 O5' 746.812 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC C A . n A 1 2 DG 2 2 2 DG G A . n A 1 3 DT 3 3 3 DT T A . n A 1 4 DT 4 4 4 DT T A . n A 1 5 DT 5 5 5 DT T A . n A 1 6 DT 6 6 6 DT T A . n A 1 7 DT 7 7 7 DT T A . n A 1 8 DA 8 8 8 DA A A . n A 1 9 DC 9 9 9 DC C A . n A 1 10 DG 10 10 10 DG G A . n B 2 1 DC 1 11 11 DC C B . n B 2 2 DG 2 12 12 DG G B . n B 2 3 DT 3 13 13 DT T B . n B 2 4 DA 4 14 14 DA A B . n B 2 5 DA 5 15 15 DA A B . n B 2 6 DA 6 16 16 DA A B . n B 2 7 DA 7 17 17 DA A B . n B 2 8 DA 8 18 18 DA A B . n B 2 9 DC 9 19 19 DC C B . n B 2 10 DG 10 20 20 DG G B . n # _pdbx_nonpoly_scheme.asym_id C _pdbx_nonpoly_scheme.entity_id 3 _pdbx_nonpoly_scheme.mon_id BIZ _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 21 _pdbx_nonpoly_scheme.auth_seq_num 21 _pdbx_nonpoly_scheme.pdb_mon_id BIZ _pdbx_nonpoly_scheme.auth_mon_id BIZ _pdbx_nonpoly_scheme.pdb_strand_id B _pdbx_nonpoly_scheme.pdb_ins_code . # _software.name AMBER _software.classification refinement _software.version . _software.citation_id ? _software.pdbx_ordinal 1 # _cell.entry_id 226D _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 226D _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # _exptl.entry_id 226D _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _database_PDB_matrix.entry_id 226D _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 226D _struct.title 'SOLUTION CONFORMATION OF A BIZELESIN A-TRACT DUPLEX ADDUCT, NMR, 1 STRUCTURE' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 226D _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'DNA, DNA-LIGAND, ADDUCT, BIZELESIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_ref.id _struct_ref.entity_id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 1 PDB 226D 226D ? ? ? 2 2 PDB 226D 226D ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 226D A 1 ? 10 ? 226D 1 ? 10 ? 1 10 2 2 226D B 1 ? 10 ? 226D 11 ? 20 ? 11 20 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 B DG 10 N1 ? ? A DC 1 B DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DG 10 O6 ? ? A DC 1 B DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 B DG 10 N2 ? ? A DC 1 B DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DG 2 N1 ? ? ? 1_555 B DC 9 N3 ? ? A DG 2 B DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DG 2 N2 ? ? ? 1_555 B DC 9 O2 ? ? A DG 2 B DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B DC 9 N4 ? ? A DG 2 B DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DT 3 N3 ? ? ? 1_555 B DA 8 N1 ? ? A DT 3 B DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DT 3 O4 ? ? ? 1_555 B DA 8 N6 ? ? A DT 3 B DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DT 4 N3 ? ? ? 1_555 B DA 7 N1 ? ? A DT 4 B DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DT 4 O4 ? ? ? 1_555 B DA 7 N6 ? ? A DT 4 B DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DT 5 N3 ? ? ? 1_555 B DA 6 N1 ? ? A DT 5 B DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DT 5 O4 ? ? ? 1_555 B DA 6 N6 ? ? A DT 5 B DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DT 6 N3 ? ? ? 1_555 B DA 5 N1 ? ? A DT 6 B DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DT 6 O4 ? ? ? 1_555 B DA 5 N6 ? ? A DT 6 B DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DT 7 N3 ? ? ? 1_555 B DA 4 N1 ? ? A DT 7 B DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DT 7 O4 ? ? ? 1_555 B DA 4 N6 ? ? A DT 7 B DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DA 8 N1 ? ? ? 1_555 B DT 3 N3 ? ? A DA 8 B DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DA 8 N6 ? ? ? 1_555 B DT 3 O4 ? ? A DA 8 B DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DC 9 N3 ? ? ? 1_555 B DG 2 N1 ? ? A DC 9 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DC 9 N4 ? ? ? 1_555 B DG 2 O6 ? ? A DC 9 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DC 9 O2 ? ? ? 1_555 B DG 2 N2 ? ? A DC 9 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DG 10 N1 ? ? ? 1_555 B DC 1 N3 ? ? A DG 10 B DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DG 10 N2 ? ? ? 1_555 B DC 1 O2 ? ? A DG 10 B DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DG 10 O6 ? ? ? 1_555 B DC 1 N4 ? ? A DG 10 B DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id B _struct_site.pdbx_auth_comp_id BIZ _struct_site.pdbx_auth_seq_id 21 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 10 _struct_site.details 'BINDING SITE FOR RESIDUE BIZ B 21' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 10 DT A 4 ? DT A 4 . ? 1_555 ? 2 AC1 10 DT A 7 ? DT A 7 . ? 1_555 ? 3 AC1 10 DA A 8 ? DA A 8 . ? 1_555 ? 4 AC1 10 DC A 9 ? DC A 9 . ? 1_555 ? 5 AC1 10 DT B 3 ? DT B 13 . ? 1_555 ? 6 AC1 10 DA B 4 ? DA B 14 . ? 1_555 ? 7 AC1 10 DA B 6 ? DA B 16 . ? 1_555 ? 8 AC1 10 DA B 7 ? DA B 17 . ? 1_555 ? 9 AC1 10 DA B 8 ? DA B 18 . ? 1_555 ? 10 AC1 10 DC B 9 ? DC B 19 . ? 1_555 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 N3 B DA 18 ? ? "CI'" B BIZ 21 ? ? 1.46 2 1 N3 A DA 8 ? ? C18 B BIZ 21 ? ? 1.46 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "O5'" A DC 1 ? ? "C5'" A DC 1 ? ? 0.923 1.418 -0.495 0.025 N 2 1 "C5'" A DC 1 ? ? "C4'" A DC 1 ? ? 1.338 1.509 -0.171 0.011 N 3 1 "C4'" A DC 1 ? ? "C3'" A DC 1 ? ? 1.402 1.521 -0.119 0.010 N 4 1 "C3'" A DC 1 ? ? "C2'" A DC 1 ? ? 1.446 1.516 -0.070 0.008 N 5 1 "C2'" A DC 1 ? ? "C1'" A DC 1 ? ? 1.415 1.518 -0.103 0.010 N 6 1 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? 1.325 1.418 -0.093 0.012 N 7 1 "O4'" A DC 1 ? ? "C4'" A DC 1 ? ? 1.286 1.446 -0.160 0.010 N 8 1 "O3'" A DC 1 ? ? "C3'" A DC 1 ? ? 1.294 1.419 -0.125 0.006 N 9 1 C2 A DC 1 ? ? O2 A DC 1 ? ? 1.169 1.240 -0.071 0.009 N 10 1 N1 A DC 1 ? ? C2 A DC 1 ? ? 1.322 1.397 -0.075 0.010 N 11 1 N1 A DC 1 ? ? C6 A DC 1 ? ? 1.296 1.367 -0.071 0.006 N 12 1 N3 A DC 1 ? ? C4 A DC 1 ? ? 1.271 1.335 -0.064 0.007 N 13 1 C4 A DC 1 ? ? C5 A DC 1 ? ? 1.364 1.425 -0.061 0.008 N 14 1 "O3'" A DC 1 ? ? P A DG 2 ? ? 1.470 1.607 -0.137 0.012 Y 15 1 P A DG 2 ? ? OP1 A DG 2 ? ? 1.273 1.485 -0.212 0.017 N 16 1 P A DG 2 ? ? OP2 A DG 2 ? ? 1.244 1.485 -0.241 0.017 N 17 1 P A DG 2 ? ? "O5'" A DG 2 ? ? 1.487 1.593 -0.106 0.010 N 18 1 "O5'" A DG 2 ? ? "C5'" A DG 2 ? ? 1.258 1.418 -0.160 0.025 N 19 1 "C5'" A DG 2 ? ? "C4'" A DG 2 ? ? 1.422 1.509 -0.087 0.011 N 20 1 "O4'" A DG 2 ? ? "C4'" A DG 2 ? ? 1.356 1.446 -0.090 0.010 N 21 1 "O3'" A DG 2 ? ? "C3'" A DG 2 ? ? 1.366 1.419 -0.053 0.006 N 22 1 "C3'" A DT 3 ? ? "C2'" A DT 3 ? ? 1.462 1.516 -0.054 0.008 N 23 1 "O4'" A DT 3 ? ? "C4'" A DT 3 ? ? 1.383 1.446 -0.063 0.010 N 24 1 "O3'" A DT 3 ? ? "C3'" A DT 3 ? ? 1.367 1.419 -0.052 0.006 N 25 1 "C3'" A DT 4 ? ? "C2'" A DT 4 ? ? 1.432 1.516 -0.084 0.008 N 26 1 "O4'" A DT 4 ? ? "C4'" A DT 4 ? ? 1.368 1.446 -0.078 0.010 N 27 1 "O3'" A DT 4 ? ? "C3'" A DT 4 ? ? 1.320 1.419 -0.099 0.006 N 28 1 P A DT 5 ? ? OP1 A DT 5 ? ? 1.376 1.485 -0.109 0.017 N 29 1 P A DT 5 ? ? OP2 A DT 5 ? ? 1.374 1.485 -0.111 0.017 N 30 1 "O4'" A DT 5 ? ? "C4'" A DT 5 ? ? 1.377 1.446 -0.069 0.010 N 31 1 "O4'" A DT 7 ? ? "C4'" A DT 7 ? ? 1.384 1.446 -0.062 0.010 N 32 1 "O3'" A DA 8 ? ? "C3'" A DA 8 ? ? 1.382 1.419 -0.037 0.006 N 33 1 C2 A DA 8 ? ? N3 A DA 8 ? ? 1.491 1.331 0.160 0.009 N 34 1 "O3'" A DA 8 ? ? P A DC 9 ? ? 1.476 1.607 -0.131 0.012 Y 35 1 P A DC 9 ? ? OP1 A DC 9 ? ? 1.348 1.485 -0.137 0.017 N 36 1 "O4'" A DC 9 ? ? "C4'" A DC 9 ? ? 1.381 1.446 -0.065 0.010 N 37 1 "O4'" A DG 10 ? ? "C4'" A DG 10 ? ? 1.380 1.446 -0.066 0.010 N 38 1 "O3'" A DG 10 ? ? "C3'" A DG 10 ? ? 1.349 1.419 -0.070 0.006 N 39 1 "O5'" B DC 11 ? ? "C5'" B DC 11 ? ? 0.984 1.418 -0.434 0.025 N 40 1 "C5'" B DC 11 ? ? "C4'" B DC 11 ? ? 1.437 1.509 -0.072 0.011 N 41 1 "O4'" B DC 11 ? ? "C4'" B DC 11 ? ? 1.335 1.446 -0.111 0.010 N 42 1 "O3'" B DC 11 ? ? "C3'" B DC 11 ? ? 1.360 1.419 -0.059 0.006 N 43 1 N1 B DC 11 ? ? C2 B DC 11 ? ? 1.335 1.397 -0.062 0.010 N 44 1 N1 B DC 11 ? ? C6 B DC 11 ? ? 1.319 1.367 -0.048 0.006 N 45 1 "O4'" B DG 12 ? ? "C4'" B DG 12 ? ? 1.373 1.446 -0.073 0.010 N 46 1 "O3'" B DG 12 ? ? "C3'" B DG 12 ? ? 1.383 1.419 -0.036 0.006 N 47 1 "O3'" B DT 13 ? ? "C3'" B DT 13 ? ? 1.375 1.419 -0.044 0.006 N 48 1 "O3'" B DA 14 ? ? "C3'" B DA 14 ? ? 1.368 1.419 -0.051 0.006 N 49 1 P B DA 15 ? ? OP1 B DA 15 ? ? 1.343 1.485 -0.142 0.017 N 50 1 P B DA 15 ? ? OP2 B DA 15 ? ? 1.358 1.485 -0.127 0.017 N 51 1 P B DA 15 ? ? "O5'" B DA 15 ? ? 1.499 1.593 -0.094 0.010 N 52 1 "C3'" B DA 15 ? ? "C2'" B DA 15 ? ? 1.463 1.516 -0.053 0.008 N 53 1 "O3'" B DA 15 ? ? "C3'" B DA 15 ? ? 1.368 1.419 -0.051 0.006 N 54 1 "O3'" B DA 16 ? ? "C3'" B DA 16 ? ? 1.368 1.419 -0.051 0.006 N 55 1 "O3'" B DA 16 ? ? P B DA 17 ? ? 1.434 1.607 -0.173 0.012 Y 56 1 P B DA 17 ? ? OP1 B DA 17 ? ? 1.333 1.485 -0.152 0.017 N 57 1 "O4'" B DA 17 ? ? "C4'" B DA 17 ? ? 1.371 1.446 -0.075 0.010 N 58 1 "O3'" B DA 17 ? ? "C3'" B DA 17 ? ? 1.364 1.419 -0.055 0.006 N 59 1 "O4'" B DA 18 ? ? "C4'" B DA 18 ? ? 1.380 1.446 -0.066 0.010 N 60 1 C2 B DA 18 ? ? N3 B DA 18 ? ? 1.489 1.331 0.158 0.009 N 61 1 "O3'" B DC 19 ? ? "C3'" B DC 19 ? ? 1.333 1.419 -0.086 0.006 N 62 1 "C4'" B DG 20 ? ? "C3'" B DG 20 ? ? 1.421 1.521 -0.100 0.010 N 63 1 "C3'" B DG 20 ? ? "C2'" B DG 20 ? ? 1.329 1.516 -0.187 0.008 N 64 1 "C2'" B DG 20 ? ? "C1'" B DG 20 ? ? 1.442 1.518 -0.076 0.010 N 65 1 "O4'" B DG 20 ? ? "C4'" B DG 20 ? ? 1.296 1.446 -0.150 0.010 N 66 1 "O3'" B DG 20 ? ? "C3'" B DG 20 ? ? 1.171 1.419 -0.248 0.006 N 67 1 C4 B DG 20 ? ? C5 B DG 20 ? ? 1.331 1.379 -0.048 0.007 N 68 1 N7 B DG 20 ? ? C8 B DG 20 ? ? 1.265 1.305 -0.040 0.006 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O5'" A DC 1 ? ? "C5'" A DC 1 ? ? "C4'" A DC 1 ? ? 132.57 111.00 21.57 2.50 N 2 1 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 113.82 108.30 5.52 0.30 N 3 1 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 112.36 108.30 4.06 0.30 N 4 1 "O4'" A DT 3 ? ? "C1'" A DT 3 ? ? N1 A DT 3 ? ? 113.04 108.30 4.74 0.30 N 5 1 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 112.16 108.30 3.86 0.30 N 6 1 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 111.29 108.30 2.99 0.30 N 7 1 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? N1 A DT 6 ? ? 114.04 108.30 5.74 0.30 N 8 1 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 111.18 108.30 2.88 0.30 N 9 1 "O4'" A DA 8 ? ? "C1'" A DA 8 ? ? "C2'" A DA 8 ? ? 98.81 105.90 -7.09 0.80 N 10 1 "O4'" A DA 8 ? ? "C1'" A DA 8 ? ? N9 A DA 8 ? ? 120.49 108.30 12.19 0.30 N 11 1 N1 A DA 8 ? ? C2 A DA 8 ? ? N3 A DA 8 ? ? 123.49 129.30 -5.81 0.50 N 12 1 C2 A DA 8 ? ? N3 A DA 8 ? ? C4 A DA 8 ? ? 115.51 110.60 4.91 0.50 N 13 1 N3 A DA 8 ? ? C4 A DA 8 ? ? C5 A DA 8 ? ? 118.37 126.80 -8.43 0.70 N 14 1 C4 A DA 8 ? ? C5 A DA 8 ? ? C6 A DA 8 ? ? 123.23 117.00 6.23 0.50 N 15 1 N3 A DA 8 ? ? C4 A DA 8 ? ? N9 A DA 8 ? ? 134.40 127.40 7.00 0.80 N 16 1 "C3'" A DA 8 ? ? "O3'" A DA 8 ? ? P A DC 9 ? ? 129.15 119.70 9.45 1.20 Y 17 1 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 111.45 108.30 3.15 0.30 N 18 1 "O4'" B DC 11 ? ? "C1'" B DC 11 ? ? N1 B DC 11 ? ? 110.90 108.30 2.60 0.30 N 19 1 "O4'" B DT 13 ? ? "C1'" B DT 13 ? ? N1 B DT 13 ? ? 113.58 108.30 5.28 0.30 N 20 1 "O4'" B DA 14 ? ? "C1'" B DA 14 ? ? "C2'" B DA 14 ? ? 100.77 105.90 -5.13 0.80 N 21 1 "O4'" B DA 14 ? ? "C1'" B DA 14 ? ? N9 B DA 14 ? ? 112.91 108.30 4.61 0.30 N 22 1 "O4'" B DA 15 ? ? "C1'" B DA 15 ? ? N9 B DA 15 ? ? 113.57 108.30 5.27 0.30 N 23 1 "O4'" B DA 16 ? ? "C1'" B DA 16 ? ? "C2'" B DA 16 ? ? 99.77 105.90 -6.13 0.80 N 24 1 "O4'" B DA 16 ? ? "C1'" B DA 16 ? ? N9 B DA 16 ? ? 112.82 108.30 4.52 0.30 N 25 1 "C3'" B DA 16 ? ? "O3'" B DA 16 ? ? P B DA 17 ? ? 133.68 119.70 13.98 1.20 Y 26 1 "O4'" B DA 17 ? ? "C1'" B DA 17 ? ? N9 B DA 17 ? ? 112.69 108.30 4.39 0.30 N 27 1 "O4'" B DA 18 ? ? "C4'" B DA 18 ? ? "C3'" B DA 18 ? ? 109.90 106.00 3.90 0.60 N 28 1 N1 B DA 18 ? ? C2 B DA 18 ? ? N3 B DA 18 ? ? 123.03 129.30 -6.27 0.50 N 29 1 C2 B DA 18 ? ? N3 B DA 18 ? ? C4 B DA 18 ? ? 116.53 110.60 5.93 0.50 N 30 1 N3 B DA 18 ? ? C4 B DA 18 ? ? C5 B DA 18 ? ? 117.71 126.80 -9.09 0.70 N 31 1 C4 B DA 18 ? ? C5 B DA 18 ? ? C6 B DA 18 ? ? 123.32 117.00 6.32 0.50 N 32 1 C5 B DA 18 ? ? C6 B DA 18 ? ? N1 B DA 18 ? ? 120.75 117.70 3.05 0.50 N 33 1 N3 B DA 18 ? ? C4 B DA 18 ? ? N9 B DA 18 ? ? 134.54 127.40 7.14 0.80 N 34 1 C6 B DA 18 ? ? C5 B DA 18 ? ? N7 B DA 18 ? ? 128.01 132.30 -4.29 0.70 N 35 1 "O4'" B DC 19 ? ? "C1'" B DC 19 ? ? N1 B DC 19 ? ? 110.52 108.30 2.22 0.30 N 36 1 "C4'" B DG 20 ? ? "C3'" B DG 20 ? ? "C2'" B DG 20 ? ? 110.97 103.10 7.87 0.90 N # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DT A 4 ? ? 0.062 'SIDE CHAIN' 2 1 DT A 6 ? ? 0.065 'SIDE CHAIN' 3 1 DA A 8 ? ? 0.084 'SIDE CHAIN' 4 1 DC A 9 ? ? 0.100 'SIDE CHAIN' 5 1 DG A 10 ? ? 0.071 'SIDE CHAIN' 6 1 DA B 18 ? ? 0.058 'SIDE CHAIN' # _pdbx_nmr_ensemble.entry_id 226D _pdbx_nmr_ensemble.conformers_calculated_total_number ? _pdbx_nmr_ensemble.conformers_submitted_total_number 1 _pdbx_nmr_ensemble.conformer_selection_criteria ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_refine.entry_id 226D _pdbx_nmr_refine.method 'RESTRAINED MOLECULAR MECHANICS, MOLECULAR DYNAMICS' _pdbx_nmr_refine.details ;THE STRUCTURE WAS REFINED USING A COMBINATION OF RESTRAINED MOLECULAR MECHANICS AND DYNAMICS USING THE AMBER 4.0 PROGRAM (UCSF). DISTANCE RESTRAINTS WERE CALCULATED USING MARDIGRAS FROM NUCLEAR OVERHAUSER EFFECT SPECTRA AT VARIOUS MIXING TIMES. ; _pdbx_nmr_refine.software_ordinal 1 # loop_ _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.classification _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal Amber 4 refinement ? 1 MARDIGRAS ? refinement ? 2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal BIZ C C N N 1 BIZ O O N N 2 BIZ N1 N N N 3 BIZ C2 C Y N 4 BIZ C3 C Y N 5 BIZ C4 C Y N 6 BIZ C5 C Y N 7 BIZ C6 C Y N 8 BIZ C7 C Y N 9 BIZ N8 N Y N 10 BIZ C9 C Y N 11 BIZ C10 C Y N 12 BIZ C11 C N N 13 BIZ O12 O N N 14 BIZ N13 N N N 15 BIZ C14 C N N 16 BIZ C15 C N S 17 BIZ C16 C Y N 18 BIZ C17 C Y N 19 BIZ C18 C N N 20 BIZ C19 C Y N 21 BIZ C20 C Y N 22 BIZ O21 O N N 23 BIZ C22 C Y N 24 BIZ C23 C Y N 25 BIZ C24 C Y N 26 BIZ C25 C Y N 27 BIZ C26 C N N 28 BIZ N27 N Y N 29 BIZ "N1'" N N N 30 BIZ "C2'" C Y N 31 BIZ "C3'" C Y N 32 BIZ "C4'" C Y N 33 BIZ "C5'" C Y N 34 BIZ "C6'" C Y N 35 BIZ "C7'" C Y N 36 BIZ "N8'" N Y N 37 BIZ "C9'" C Y N 38 BIZ "CA'" C Y N 39 BIZ "CB'" C N N 40 BIZ "OC'" O N N 41 BIZ "ND'" N N N 42 BIZ "CE'" C N N 43 BIZ "CF'" C N S 44 BIZ "CG'" C Y N 45 BIZ "CH'" C Y N 46 BIZ "CI'" C N N 47 BIZ "CJ'" C Y N 48 BIZ "CK'" C Y N 49 BIZ "OL'" O N N 50 BIZ "CM'" C Y N 51 BIZ "CN'" C Y N 52 BIZ "CO'" C Y N 53 BIZ "CP'" C Y N 54 BIZ "CQ'" C N N 55 BIZ "NR'" N Y N 56 BIZ HN1 H N N 57 BIZ H3 H N N 58 BIZ H6 H N N 59 BIZ H7 H N N 60 BIZ HN8 H N N 61 BIZ H10 H N N 62 BIZ H141 H N N 63 BIZ H142 H N N 64 BIZ H15 H N N 65 BIZ H181 H N N 66 BIZ H182 H N N 67 BIZ H183 H N N 68 BIZ H19 H N N 69 BIZ HO2 H N N 70 BIZ H25 H N N 71 BIZ H261 H N N 72 BIZ H262 H N N 73 BIZ H263 H N N 74 BIZ HN7 H N N 75 BIZ "HN1'" H N N 76 BIZ "H3'" H N N 77 BIZ "H6'" H N N 78 BIZ "H7'" H N N 79 BIZ "HN8'" H N N 80 BIZ "H10'" H N N 81 BIZ "H4'1" H N N 82 BIZ "H4'2" H N N 83 BIZ "H15'" H N N 84 BIZ "H8'1" H N N 85 BIZ "H8'2" H N N 86 BIZ "H8'3" H N N 87 BIZ "H19'" H N N 88 BIZ "HO2'" H N N 89 BIZ "H25'" H N N 90 BIZ "H6'1" H N N 91 BIZ "H6'2" H N N 92 BIZ "H6'3" H N N 93 BIZ "HN7'" H N N 94 DA OP3 O N N 95 DA P P N N 96 DA OP1 O N N 97 DA OP2 O N N 98 DA "O5'" O N N 99 DA "C5'" C N N 100 DA "C4'" C N R 101 DA "O4'" O N N 102 DA "C3'" C N S 103 DA "O3'" O N N 104 DA "C2'" C N N 105 DA "C1'" C N R 106 DA N9 N Y N 107 DA C8 C Y N 108 DA N7 N Y N 109 DA C5 C Y N 110 DA C6 C Y N 111 DA N6 N N N 112 DA N1 N Y N 113 DA C2 C Y N 114 DA N3 N Y N 115 DA C4 C Y N 116 DA HOP3 H N N 117 DA HOP2 H N N 118 DA "H5'" H N N 119 DA "H5''" H N N 120 DA "H4'" H N N 121 DA "H3'" H N N 122 DA "HO3'" H N N 123 DA "H2'" H N N 124 DA "H2''" H N N 125 DA "H1'" H N N 126 DA H8 H N N 127 DA H61 H N N 128 DA H62 H N N 129 DA H2 H N N 130 DC OP3 O N N 131 DC P P N N 132 DC OP1 O N N 133 DC OP2 O N N 134 DC "O5'" O N N 135 DC "C5'" C N N 136 DC "C4'" C N R 137 DC "O4'" O N N 138 DC "C3'" C N S 139 DC "O3'" O N N 140 DC "C2'" C N N 141 DC "C1'" C N R 142 DC N1 N N N 143 DC C2 C N N 144 DC O2 O N N 145 DC N3 N N N 146 DC C4 C N N 147 DC N4 N N N 148 DC C5 C N N 149 DC C6 C N N 150 DC HOP3 H N N 151 DC HOP2 H N N 152 DC "H5'" H N N 153 DC "H5''" H N N 154 DC "H4'" H N N 155 DC "H3'" H N N 156 DC "HO3'" H N N 157 DC "H2'" H N N 158 DC "H2''" H N N 159 DC "H1'" H N N 160 DC H41 H N N 161 DC H42 H N N 162 DC H5 H N N 163 DC H6 H N N 164 DG OP3 O N N 165 DG P P N N 166 DG OP1 O N N 167 DG OP2 O N N 168 DG "O5'" O N N 169 DG "C5'" C N N 170 DG "C4'" C N R 171 DG "O4'" O N N 172 DG "C3'" C N S 173 DG "O3'" O N N 174 DG "C2'" C N N 175 DG "C1'" C N R 176 DG N9 N Y N 177 DG C8 C Y N 178 DG N7 N Y N 179 DG C5 C Y N 180 DG C6 C N N 181 DG O6 O N N 182 DG N1 N N N 183 DG C2 C N N 184 DG N2 N N N 185 DG N3 N N N 186 DG C4 C Y N 187 DG HOP3 H N N 188 DG HOP2 H N N 189 DG "H5'" H N N 190 DG "H5''" H N N 191 DG "H4'" H N N 192 DG "H3'" H N N 193 DG "HO3'" H N N 194 DG "H2'" H N N 195 DG "H2''" H N N 196 DG "H1'" H N N 197 DG H8 H N N 198 DG H1 H N N 199 DG H21 H N N 200 DG H22 H N N 201 DT OP3 O N N 202 DT P P N N 203 DT OP1 O N N 204 DT OP2 O N N 205 DT "O5'" O N N 206 DT "C5'" C N N 207 DT "C4'" C N R 208 DT "O4'" O N N 209 DT "C3'" C N S 210 DT "O3'" O N N 211 DT "C2'" C N N 212 DT "C1'" C N R 213 DT N1 N N N 214 DT C2 C N N 215 DT O2 O N N 216 DT N3 N N N 217 DT C4 C N N 218 DT O4 O N N 219 DT C5 C N N 220 DT C7 C N N 221 DT C6 C N N 222 DT HOP3 H N N 223 DT HOP2 H N N 224 DT "H5'" H N N 225 DT "H5''" H N N 226 DT "H4'" H N N 227 DT "H3'" H N N 228 DT "HO3'" H N N 229 DT "H2'" H N N 230 DT "H2''" H N N 231 DT "H1'" H N N 232 DT H3 H N N 233 DT H71 H N N 234 DT H72 H N N 235 DT H73 H N N 236 DT H6 H N N 237 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal BIZ C O doub N N 1 BIZ C N1 sing N N 2 BIZ C "N1'" sing N N 3 BIZ N1 C2 sing N N 4 BIZ N1 HN1 sing N N 5 BIZ C2 C3 doub Y N 6 BIZ C2 C7 sing Y N 7 BIZ C3 C4 sing Y N 8 BIZ C3 H3 sing N N 9 BIZ C4 C5 doub Y N 10 BIZ C4 C10 sing Y N 11 BIZ C5 C6 sing Y N 12 BIZ C5 N8 sing Y N 13 BIZ C6 C7 doub Y N 14 BIZ C6 H6 sing N N 15 BIZ C7 H7 sing N N 16 BIZ N8 C9 sing Y N 17 BIZ N8 HN8 sing N N 18 BIZ C9 C10 doub Y N 19 BIZ C9 C11 sing N N 20 BIZ C10 H10 sing N N 21 BIZ C11 O12 doub N N 22 BIZ C11 N13 sing N N 23 BIZ N13 C14 sing N N 24 BIZ N13 C17 sing N N 25 BIZ C14 C15 sing N N 26 BIZ C14 H141 sing N N 27 BIZ C14 H142 sing N N 28 BIZ C15 C16 sing N N 29 BIZ C15 C18 sing N N 30 BIZ C15 H15 sing N N 31 BIZ C16 C17 doub Y N 32 BIZ C16 C23 sing Y N 33 BIZ C17 C19 sing Y N 34 BIZ C18 H181 sing N N 35 BIZ C18 H182 sing N N 36 BIZ C18 H183 sing N N 37 BIZ C19 C20 doub Y N 38 BIZ C19 H19 sing N N 39 BIZ C20 O21 sing N N 40 BIZ C20 C22 sing Y N 41 BIZ O21 HO2 sing N N 42 BIZ C22 C23 doub Y N 43 BIZ C22 N27 sing Y N 44 BIZ C23 C24 sing Y N 45 BIZ C24 C25 doub Y N 46 BIZ C24 C26 sing N N 47 BIZ C25 N27 sing Y N 48 BIZ C25 H25 sing N N 49 BIZ C26 H261 sing N N 50 BIZ C26 H262 sing N N 51 BIZ C26 H263 sing N N 52 BIZ N27 HN7 sing N N 53 BIZ "N1'" "C2'" sing N N 54 BIZ "N1'" "HN1'" sing N N 55 BIZ "C2'" "C3'" doub Y N 56 BIZ "C2'" "C7'" sing Y N 57 BIZ "C3'" "C4'" sing Y N 58 BIZ "C3'" "H3'" sing N N 59 BIZ "C4'" "C5'" doub Y N 60 BIZ "C4'" "CA'" sing Y N 61 BIZ "C5'" "C6'" sing Y N 62 BIZ "C5'" "N8'" sing Y N 63 BIZ "C6'" "C7'" doub Y N 64 BIZ "C6'" "H6'" sing N N 65 BIZ "C7'" "H7'" sing N N 66 BIZ "N8'" "C9'" sing Y N 67 BIZ "N8'" "HN8'" sing N N 68 BIZ "C9'" "CA'" doub Y N 69 BIZ "C9'" "CB'" sing N N 70 BIZ "CA'" "H10'" sing N N 71 BIZ "CB'" "OC'" doub N N 72 BIZ "CB'" "ND'" sing N N 73 BIZ "ND'" "CE'" sing N N 74 BIZ "ND'" "CH'" sing N N 75 BIZ "CE'" "CF'" sing N N 76 BIZ "CE'" "H4'1" sing N N 77 BIZ "CE'" "H4'2" sing N N 78 BIZ "CF'" "CG'" sing N N 79 BIZ "CF'" "CI'" sing N N 80 BIZ "CF'" "H15'" sing N N 81 BIZ "CG'" "CH'" doub Y N 82 BIZ "CG'" "CN'" sing Y N 83 BIZ "CH'" "CJ'" sing Y N 84 BIZ "CI'" "H8'1" sing N N 85 BIZ "CI'" "H8'2" sing N N 86 BIZ "CI'" "H8'3" sing N N 87 BIZ "CJ'" "CK'" doub Y N 88 BIZ "CJ'" "H19'" sing N N 89 BIZ "CK'" "OL'" sing N N 90 BIZ "CK'" "CM'" sing Y N 91 BIZ "OL'" "HO2'" sing N N 92 BIZ "CM'" "CN'" doub Y N 93 BIZ "CM'" "NR'" sing Y N 94 BIZ "CN'" "CO'" sing Y N 95 BIZ "CO'" "CP'" doub Y N 96 BIZ "CO'" "CQ'" sing N N 97 BIZ "CP'" "NR'" sing Y N 98 BIZ "CP'" "H25'" sing N N 99 BIZ "CQ'" "H6'1" sing N N 100 BIZ "CQ'" "H6'2" sing N N 101 BIZ "CQ'" "H6'3" sing N N 102 BIZ "NR'" "HN7'" sing N N 103 DA OP3 P sing N N 104 DA OP3 HOP3 sing N N 105 DA P OP1 doub N N 106 DA P OP2 sing N N 107 DA P "O5'" sing N N 108 DA OP2 HOP2 sing N N 109 DA "O5'" "C5'" sing N N 110 DA "C5'" "C4'" sing N N 111 DA "C5'" "H5'" sing N N 112 DA "C5'" "H5''" sing N N 113 DA "C4'" "O4'" sing N N 114 DA "C4'" "C3'" sing N N 115 DA "C4'" "H4'" sing N N 116 DA "O4'" "C1'" sing N N 117 DA "C3'" "O3'" sing N N 118 DA "C3'" "C2'" sing N N 119 DA "C3'" "H3'" sing N N 120 DA "O3'" "HO3'" sing N N 121 DA "C2'" "C1'" sing N N 122 DA "C2'" "H2'" sing N N 123 DA "C2'" "H2''" sing N N 124 DA "C1'" N9 sing N N 125 DA "C1'" "H1'" sing N N 126 DA N9 C8 sing Y N 127 DA N9 C4 sing Y N 128 DA C8 N7 doub Y N 129 DA C8 H8 sing N N 130 DA N7 C5 sing Y N 131 DA C5 C6 sing Y N 132 DA C5 C4 doub Y N 133 DA C6 N6 sing N N 134 DA C6 N1 doub Y N 135 DA N6 H61 sing N N 136 DA N6 H62 sing N N 137 DA N1 C2 sing Y N 138 DA C2 N3 doub Y N 139 DA C2 H2 sing N N 140 DA N3 C4 sing Y N 141 DC OP3 P sing N N 142 DC OP3 HOP3 sing N N 143 DC P OP1 doub N N 144 DC P OP2 sing N N 145 DC P "O5'" sing N N 146 DC OP2 HOP2 sing N N 147 DC "O5'" "C5'" sing N N 148 DC "C5'" "C4'" sing N N 149 DC "C5'" "H5'" sing N N 150 DC "C5'" "H5''" sing N N 151 DC "C4'" "O4'" sing N N 152 DC "C4'" "C3'" sing N N 153 DC "C4'" "H4'" sing N N 154 DC "O4'" "C1'" sing N N 155 DC "C3'" "O3'" sing N N 156 DC "C3'" "C2'" sing N N 157 DC "C3'" "H3'" sing N N 158 DC "O3'" "HO3'" sing N N 159 DC "C2'" "C1'" sing N N 160 DC "C2'" "H2'" sing N N 161 DC "C2'" "H2''" sing N N 162 DC "C1'" N1 sing N N 163 DC "C1'" "H1'" sing N N 164 DC N1 C2 sing N N 165 DC N1 C6 sing N N 166 DC C2 O2 doub N N 167 DC C2 N3 sing N N 168 DC N3 C4 doub N N 169 DC C4 N4 sing N N 170 DC C4 C5 sing N N 171 DC N4 H41 sing N N 172 DC N4 H42 sing N N 173 DC C5 C6 doub N N 174 DC C5 H5 sing N N 175 DC C6 H6 sing N N 176 DG OP3 P sing N N 177 DG OP3 HOP3 sing N N 178 DG P OP1 doub N N 179 DG P OP2 sing N N 180 DG P "O5'" sing N N 181 DG OP2 HOP2 sing N N 182 DG "O5'" "C5'" sing N N 183 DG "C5'" "C4'" sing N N 184 DG "C5'" "H5'" sing N N 185 DG "C5'" "H5''" sing N N 186 DG "C4'" "O4'" sing N N 187 DG "C4'" "C3'" sing N N 188 DG "C4'" "H4'" sing N N 189 DG "O4'" "C1'" sing N N 190 DG "C3'" "O3'" sing N N 191 DG "C3'" "C2'" sing N N 192 DG "C3'" "H3'" sing N N 193 DG "O3'" "HO3'" sing N N 194 DG "C2'" "C1'" sing N N 195 DG "C2'" "H2'" sing N N 196 DG "C2'" "H2''" sing N N 197 DG "C1'" N9 sing N N 198 DG "C1'" "H1'" sing N N 199 DG N9 C8 sing Y N 200 DG N9 C4 sing Y N 201 DG C8 N7 doub Y N 202 DG C8 H8 sing N N 203 DG N7 C5 sing Y N 204 DG C5 C6 sing N N 205 DG C5 C4 doub Y N 206 DG C6 O6 doub N N 207 DG C6 N1 sing N N 208 DG N1 C2 sing N N 209 DG N1 H1 sing N N 210 DG C2 N2 sing N N 211 DG C2 N3 doub N N 212 DG N2 H21 sing N N 213 DG N2 H22 sing N N 214 DG N3 C4 sing N N 215 DT OP3 P sing N N 216 DT OP3 HOP3 sing N N 217 DT P OP1 doub N N 218 DT P OP2 sing N N 219 DT P "O5'" sing N N 220 DT OP2 HOP2 sing N N 221 DT "O5'" "C5'" sing N N 222 DT "C5'" "C4'" sing N N 223 DT "C5'" "H5'" sing N N 224 DT "C5'" "H5''" sing N N 225 DT "C4'" "O4'" sing N N 226 DT "C4'" "C3'" sing N N 227 DT "C4'" "H4'" sing N N 228 DT "O4'" "C1'" sing N N 229 DT "C3'" "O3'" sing N N 230 DT "C3'" "C2'" sing N N 231 DT "C3'" "H3'" sing N N 232 DT "O3'" "HO3'" sing N N 233 DT "C2'" "C1'" sing N N 234 DT "C2'" "H2'" sing N N 235 DT "C2'" "H2''" sing N N 236 DT "C1'" N1 sing N N 237 DT "C1'" "H1'" sing N N 238 DT N1 C2 sing N N 239 DT N1 C6 sing N N 240 DT C2 O2 doub N N 241 DT C2 N3 sing N N 242 DT N3 C4 sing N N 243 DT N3 H3 sing N N 244 DT C4 O4 doub N N 245 DT C4 C5 sing N N 246 DT C5 C7 sing N N 247 DT C5 C6 doub N N 248 DT C7 H71 sing N N 249 DT C7 H72 sing N N 250 DT C7 H73 sing N N 251 DT C6 H6 sing N N 252 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 226D 'double helix' 226D 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 B DG 10 1_555 0.127 -0.278 0.281 -5.552 -12.104 -1.877 1 A_DC1:DG20_B A 1 ? B 20 ? 19 1 1 A DG 2 1_555 B DC 9 1_555 -0.187 -0.210 0.055 -10.659 -15.342 -0.725 2 A_DG2:DC19_B A 2 ? B 19 ? 19 1 1 A DT 3 1_555 B DA 8 1_555 0.272 -0.088 0.230 -9.497 -16.375 -0.694 3 A_DT3:DA18_B A 3 ? B 18 ? 20 1 1 A DT 4 1_555 B DA 7 1_555 0.030 -0.064 0.187 -12.632 -21.902 -6.161 4 A_DT4:DA17_B A 4 ? B 17 ? 20 1 1 A DT 5 1_555 B DA 6 1_555 0.010 -0.150 -0.016 0.160 -1.336 0.583 5 A_DT5:DA16_B A 5 ? B 16 ? 20 1 1 A DT 6 1_555 B DA 5 1_555 0.474 -0.192 0.200 -5.148 -12.168 2.023 6 A_DT6:DA15_B A 6 ? B 15 ? 20 1 1 A DT 7 1_555 B DA 4 1_555 -0.100 -0.057 0.333 -8.966 -14.963 5.293 7 A_DT7:DA14_B A 7 ? B 14 ? 20 1 1 A DA 8 1_555 B DT 3 1_555 -0.197 -0.088 0.423 1.792 -9.563 2.326 8 A_DA8:DT13_B A 8 ? B 13 ? 20 1 1 A DC 9 1_555 B DG 2 1_555 0.019 -0.192 0.354 1.715 -15.826 -2.918 9 A_DC9:DG12_B A 9 ? B 12 ? 19 1 1 A DG 10 1_555 B DC 1 1_555 -0.019 -0.252 0.518 0.752 -17.391 -3.374 10 A_DG10:DC11_B A 10 ? B 11 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 B DG 10 1_555 A DG 2 1_555 B DC 9 1_555 -0.010 -0.793 3.328 3.735 6.809 34.933 -2.268 0.552 3.107 11.173 -6.128 35.759 1 AA_DC1DG2:DC19DG20_BB A 1 ? B 20 ? A 2 ? B 19 ? 1 A DG 2 1_555 B DC 9 1_555 A DT 3 1_555 B DA 8 1_555 0.322 -0.339 3.209 0.404 1.242 32.566 -0.817 -0.505 3.198 2.214 -0.719 32.592 2 AA_DG2DT3:DA18DC19_BB A 2 ? B 19 ? A 3 ? B 18 ? 1 A DT 3 1_555 B DA 8 1_555 A DT 4 1_555 B DA 7 1_555 0.317 -0.691 3.154 5.359 2.452 37.646 -1.359 0.170 3.119 3.772 -8.243 38.088 3 AA_DT3DT4:DA17DA18_BB A 3 ? B 18 ? A 4 ? B 17 ? 1 A DT 4 1_555 B DA 7 1_555 A DT 5 1_555 B DA 6 1_555 0.781 -0.053 3.176 -1.502 -10.375 34.699 1.330 -1.462 3.031 -16.923 2.451 36.201 4 AA_DT4DT5:DA16DA17_BB A 4 ? B 17 ? A 5 ? B 16 ? 1 A DT 5 1_555 B DA 6 1_555 A DT 6 1_555 B DA 5 1_555 0.602 -1.682 3.395 1.717 6.359 28.613 -4.674 -0.822 2.989 12.656 -3.416 29.346 5 AA_DT5DT6:DA15DA16_BB A 5 ? B 16 ? A 6 ? B 15 ? 1 A DT 6 1_555 B DA 5 1_555 A DT 7 1_555 B DA 4 1_555 -0.166 -1.546 3.193 2.209 2.258 28.671 -3.585 0.805 3.044 4.543 -4.444 28.841 6 AA_DT6DT7:DA14DA15_BB A 6 ? B 15 ? A 7 ? B 14 ? 1 A DT 7 1_555 B DA 4 1_555 A DA 8 1_555 B DT 3 1_555 -0.147 -0.725 2.818 -1.840 1.477 29.557 -1.683 -0.045 2.783 2.888 3.599 29.649 7 AA_DT7DA8:DT13DA14_BB A 7 ? B 14 ? A 8 ? B 13 ? 1 A DA 8 1_555 B DT 3 1_555 A DC 9 1_555 B DG 2 1_555 -1.511 -0.193 3.292 1.642 -0.863 37.600 -0.188 2.553 3.229 -1.338 -2.545 37.644 8 AA_DA8DC9:DG12DT13_BB A 8 ? B 13 ? A 9 ? B 12 ? 1 A DC 9 1_555 B DG 2 1_555 A DG 10 1_555 B DC 1 1_555 0.167 -0.183 3.111 -2.346 6.030 35.717 -1.091 -0.578 3.025 9.732 3.787 36.280 9 AA_DC9DG10:DC11DG12_BB A 9 ? B 12 ? A 10 ? B 11 ? # _atom_sites.entry_id 226D _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P # loop_