data_265D # _entry.id 265D # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 265D pdb_0000265d 10.2210/pdb265d/pdb RCSB BDLB72 ? ? WWPDB D_1000177677 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1996-08-28 2 'Structure model' 1 1 2008-05-22 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2012-02-29 5 'Structure model' 1 4 2024-02-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' Other 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' chem_comp_atom 2 5 'Structure model' chem_comp_bond 3 5 'Structure model' database_2 4 5 'Structure model' pdbx_struct_conn_angle 5 5 'Structure model' struct_conn 6 5 'Structure model' struct_conn_type 7 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 4 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 7 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 8 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 9 5 'Structure model' '_pdbx_struct_conn_angle.value' 10 5 'Structure model' '_struct_conn.conn_type_id' 11 5 'Structure model' '_struct_conn.id' 12 5 'Structure model' '_struct_conn.pdbx_dist_value' 13 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 14 5 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 15 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 16 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 17 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 18 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 19 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 20 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 21 5 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 22 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 23 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 24 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 25 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 26 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 27 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 28 5 'Structure model' '_struct_conn_type.id' 29 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 30 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 31 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 265D _pdbx_database_status.recvd_initial_deposition_date 1996-07-12 _pdbx_database_status.deposit_site NDB _pdbx_database_status.process_site NDB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 266D unspecified . PDB 267D unspecified . PDB 268D unspecified . PDB 269D unspecified . PDB 270D unspecified . PDB 271D unspecified . # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Partridge, B.L.' 1 'Salisbury, S.A.' 2 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI 1 'Structural Studies on Nucleic Acids' 'Thesis, University of Cambridge' ? ? ? 1996 ? UK ? 2108 ? ? ? primary ? 'To be Published' ? ? ? 1996 ? ? ? 0353 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Partridge, B.L.' 1 ? primary 'Salisbury, S.A.' 2 ? 1 'Partridge, B.L.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man ;DNA (5'-D(*CP*GP*(5CM)P*GP*AP*AP*TP*TP*(5CM)P*GP*CP*G)-3') ; 3691.446 2 ? ? ? ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 3 water nat water 18.015 117 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(DC)(DG)(5CM)(DG)(DA)(DA)(DT)(DT)(5CM)(DG)(DC)(DG)' _entity_poly.pdbx_seq_one_letter_code_can CGCGAATTCGCG _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DG n 1 3 5CM n 1 4 DG n 1 5 DA n 1 6 DA n 1 7 DT n 1 8 DT n 1 9 5CM n 1 10 DG n 1 11 DC n 1 12 DG n # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 5CM 'DNA linking' n "5-METHYL-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE" ? 'C10 H16 N3 O7 P' 321.224 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC C A . n A 1 2 DG 2 2 2 DG G A . n A 1 3 5CM 3 3 3 5CM +C A . n A 1 4 DG 4 4 4 DG G A . n A 1 5 DA 5 5 5 DA A A . n A 1 6 DA 6 6 6 DA A A . n A 1 7 DT 7 7 7 DT T A . n A 1 8 DT 8 8 8 DT T A . n A 1 9 5CM 9 9 9 5CM +C A . n A 1 10 DG 10 10 10 DG G A . n A 1 11 DC 11 11 11 DC C A . n A 1 12 DG 12 12 12 DG G A . n B 1 1 DC 1 13 13 DC C B . n B 1 2 DG 2 14 14 DG G B . n B 1 3 5CM 3 15 15 5CM +C B . n B 1 4 DG 4 16 16 DG G B . n B 1 5 DA 5 17 17 DA A B . n B 1 6 DA 6 18 18 DA A B . n B 1 7 DT 7 19 19 DT T B . n B 1 8 DT 8 20 20 DT T B . n B 1 9 5CM 9 21 21 5CM +C B . n B 1 10 DG 10 22 22 DG G B . n B 1 11 DC 11 23 23 DC C B . n B 1 12 DG 12 24 24 DG G B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG 1 25 25 MG MO6 A . D 3 HOH 1 26 26 HOH HOH A . D 3 HOH 2 29 29 HOH HOH A . D 3 HOH 3 30 30 HOH HOH A . D 3 HOH 4 31 31 HOH HOH A . D 3 HOH 5 32 32 HOH HOH A . D 3 HOH 6 33 33 HOH HOH A . D 3 HOH 7 34 34 HOH HOH A . D 3 HOH 8 37 37 HOH HOH A . D 3 HOH 9 41 41 HOH HOH A . D 3 HOH 10 44 44 HOH HOH A . D 3 HOH 11 46 46 HOH HOH A . D 3 HOH 12 47 47 HOH HOH A . D 3 HOH 13 51 51 HOH HOH A . D 3 HOH 14 54 54 HOH HOH A . D 3 HOH 15 55 55 HOH HOH A . D 3 HOH 16 57 57 HOH HOH A . D 3 HOH 17 58 58 HOH HOH A . D 3 HOH 18 60 60 HOH HOH A . D 3 HOH 19 64 64 HOH HOH A . D 3 HOH 20 65 65 HOH HOH A . D 3 HOH 21 66 66 HOH HOH A . D 3 HOH 22 67 67 HOH HOH A . D 3 HOH 23 68 68 HOH HOH A . D 3 HOH 24 71 71 HOH HOH A . D 3 HOH 25 72 72 HOH HOH A . D 3 HOH 26 73 73 HOH HOH A . D 3 HOH 27 75 75 HOH HOH A . D 3 HOH 28 77 77 HOH HOH A . D 3 HOH 29 78 78 HOH HOH A . D 3 HOH 30 81 81 HOH HOH A . D 3 HOH 31 82 82 HOH HOH A . D 3 HOH 32 84 84 HOH HOH A . D 3 HOH 33 86 86 HOH HOH A . D 3 HOH 34 88 88 HOH HOH A . D 3 HOH 35 89 89 HOH HOH A . D 3 HOH 36 90 90 HOH HOH A . D 3 HOH 37 94 94 HOH HOH A . D 3 HOH 38 95 95 HOH HOH A . D 3 HOH 39 97 97 HOH HOH A . D 3 HOH 40 98 98 HOH HOH A . D 3 HOH 41 99 99 HOH HOH A . D 3 HOH 42 100 100 HOH HOH A . D 3 HOH 43 102 102 HOH HOH A . D 3 HOH 44 105 105 HOH HOH A . D 3 HOH 45 106 106 HOH HOH A . D 3 HOH 46 107 107 HOH HOH A . D 3 HOH 47 110 110 HOH HOH A . D 3 HOH 48 116 116 HOH HOH A . D 3 HOH 49 120 120 HOH HOH A . D 3 HOH 50 124 124 HOH HOH A . D 3 HOH 51 126 126 HOH HOH A . D 3 HOH 52 127 127 HOH HOH A . D 3 HOH 53 128 128 HOH HOH A . D 3 HOH 54 132 132 HOH HOH A . D 3 HOH 55 133 133 HOH HOH A . D 3 HOH 56 134 134 HOH HOH A . D 3 HOH 57 135 135 HOH HOH A . D 3 HOH 58 136 136 HOH HOH A . D 3 HOH 59 137 25 HOH MO6 A . D 3 HOH 60 140 25 HOH MO6 A . D 3 HOH 61 141 25 HOH MO6 A . E 3 HOH 1 27 27 HOH HOH B . E 3 HOH 2 28 28 HOH HOH B . E 3 HOH 3 35 35 HOH HOH B . E 3 HOH 4 36 36 HOH HOH B . E 3 HOH 5 38 38 HOH HOH B . E 3 HOH 6 39 39 HOH HOH B . E 3 HOH 7 40 40 HOH HOH B . E 3 HOH 8 42 42 HOH HOH B . E 3 HOH 9 43 43 HOH HOH B . E 3 HOH 10 45 45 HOH HOH B . E 3 HOH 11 48 48 HOH HOH B . E 3 HOH 12 49 49 HOH HOH B . E 3 HOH 13 50 50 HOH HOH B . E 3 HOH 14 52 52 HOH HOH B . E 3 HOH 15 53 53 HOH HOH B . E 3 HOH 16 56 56 HOH HOH B . E 3 HOH 17 59 59 HOH HOH B . E 3 HOH 18 61 61 HOH HOH B . E 3 HOH 19 62 62 HOH HOH B . E 3 HOH 20 63 63 HOH HOH B . E 3 HOH 21 69 69 HOH HOH B . E 3 HOH 22 70 70 HOH HOH B . E 3 HOH 23 74 74 HOH HOH B . E 3 HOH 24 76 76 HOH HOH B . E 3 HOH 25 79 79 HOH HOH B . E 3 HOH 26 80 80 HOH HOH B . E 3 HOH 27 83 83 HOH HOH B . E 3 HOH 28 85 85 HOH HOH B . E 3 HOH 29 87 87 HOH HOH B . E 3 HOH 30 91 91 HOH HOH B . E 3 HOH 31 92 92 HOH HOH B . E 3 HOH 32 93 93 HOH HOH B . E 3 HOH 33 96 96 HOH HOH B . E 3 HOH 34 101 101 HOH HOH B . E 3 HOH 35 103 103 HOH HOH B . E 3 HOH 36 104 104 HOH HOH B . E 3 HOH 37 108 108 HOH HOH B . E 3 HOH 38 109 109 HOH HOH B . E 3 HOH 39 111 111 HOH HOH B . E 3 HOH 40 112 112 HOH HOH B . E 3 HOH 41 113 113 HOH HOH B . E 3 HOH 42 114 114 HOH HOH B . E 3 HOH 43 115 115 HOH HOH B . E 3 HOH 44 117 117 HOH HOH B . E 3 HOH 45 118 118 HOH HOH B . E 3 HOH 46 119 119 HOH HOH B . E 3 HOH 47 121 121 HOH HOH B . E 3 HOH 48 122 122 HOH HOH B . E 3 HOH 49 123 123 HOH HOH B . E 3 HOH 50 125 125 HOH HOH B . E 3 HOH 51 129 129 HOH HOH B . E 3 HOH 52 130 130 HOH HOH B . E 3 HOH 53 131 131 HOH HOH B . E 3 HOH 54 138 25 HOH MO6 B . E 3 HOH 55 139 25 HOH MO6 B . E 3 HOH 56 142 25 HOH MO6 B . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal NUCLSQ refinement . ? 1 RIGAKU 'data reduction' . ? 2 RIGAKU 'data scaling' . ? 3 # _cell.entry_id 265D _cell.length_a 25.426 _cell.length_b 40.490 _cell.length_c 65.319 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 265D _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # _exptl.entry_id 265D _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 45.98 _exptl_crystal.density_Matthews 2.28 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.10 _exptl_crystal_grow.pdbx_details 'pH 7.10' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 WATER ? ? ? 1 2 1 'NA CACODYLATE' ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100.00 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IIC' _diffrn_detector.pdbx_collection_date 1995-03-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator GRAPHITE _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU200' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 265D _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 32.600 _reflns.d_resolution_high 2.010 _reflns.number_obs 11473 _reflns.number_all ? _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs 0.1148 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _refine.entry_id 265D _refine.ls_number_reflns_obs 4233 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 4.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high 2.010 _refine.ls_percent_reflns_obs 86.200 _refine.ls_R_factor_obs 0.172 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ;STANDARD R-FACTOR = 17.2% ERROR R-FACTOR = 5.3% WEIGHTED R-FACTOR = 16.8% NUMBER OF REFLECTIONS INCLUDED = 11473 AVERAGE |FO-FC| DISCREPANCY = 29.47 AVERAGE WEIGHTED |FO-FC| DISCREPANCY = 0.13 CORRELATION COEFFICIENT = 102.8% RESOLUTION BREAKDOWN "ALL" R FACTOR = 17.2% ; _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MIR _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_overall_phase_error ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 490 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 117 _refine_hist.number_atoms_total 608 _refine_hist.d_res_high 2.010 _refine_hist.d_res_low . # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function n_bond_d 0.024 0.015 ? ? 'X-RAY DIFFRACTION' ? n_angle_d 0.053 0.025 ? ? 'X-RAY DIFFRACTION' ? n_planar_d ? ? ? ? 'X-RAY DIFFRACTION' ? n_hb_or_metal_coord ? ? ? ? 'X-RAY DIFFRACTION' ? n_sugar_bond_it 10.020 7.500 ? ? 'X-RAY DIFFRACTION' ? n_sugar_angle_it 11.008 7.500 ? ? 'X-RAY DIFFRACTION' ? n_phos_bond_it 10.707 7.500 ? ? 'X-RAY DIFFRACTION' ? n_phos_angle_it 11.229 7.500 ? ? 'X-RAY DIFFRACTION' ? n_bond_angle_restr ? ? ? ? 'X-RAY DIFFRACTION' ? n_dihedral_angle_restr ? ? ? ? 'X-RAY DIFFRACTION' ? n_impr_tor ? ? ? ? 'X-RAY DIFFRACTION' ? n_sugar_bond_d ? ? ? ? 'X-RAY DIFFRACTION' ? n_sugar_bond_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? n_phos_bond_d 0.028 0.015 ? ? 'X-RAY DIFFRACTION' ? n_phos_bond_angle_d 0.057 0.025 ? ? 'X-RAY DIFFRACTION' ? n_plane_restr 0.029 0.015 ? ? 'X-RAY DIFFRACTION' ? n_chiral_restr 0.055 0.040 ? ? 'X-RAY DIFFRACTION' ? n_singtor_nbd 0.101 0.063 ? ? 'X-RAY DIFFRACTION' ? n_multtor_nbd 0.272 0.063 ? ? 'X-RAY DIFFRACTION' ? n_xhyhbond_nbd 0.393 0.063 ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 265D _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 265D _struct.title 'STRUCTURAL STUDIES ON NUCLEIC ACIDS' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 265D _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'B-DNA, DOUBLE HELIX, MODIFIED, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 265D _struct_ref.pdbx_db_accession 265D _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 265D A 1 ? 12 ? 265D 1 ? 12 ? 1 12 2 1 265D B 1 ? 12 ? 265D 13 ? 24 ? 13 24 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A DG 2 "O3'" ? ? ? 1_555 A 5CM 3 P ? ? A DG 2 A 5CM 3 1_555 ? ? ? ? ? ? ? 1.572 ? ? covale2 covale both ? A 5CM 3 "O3'" ? ? ? 1_555 A DG 4 P ? ? A 5CM 3 A DG 4 1_555 ? ? ? ? ? ? ? 1.649 ? ? covale3 covale both ? A DT 8 "O3'" ? ? ? 1_555 A 5CM 9 P ? ? A DT 8 A 5CM 9 1_555 ? ? ? ? ? ? ? 1.657 ? ? covale4 covale both ? A 5CM 9 "O3'" ? ? ? 1_555 A DG 10 P ? ? A 5CM 9 A DG 10 1_555 ? ? ? ? ? ? ? 1.646 ? ? covale5 covale both ? B DG 2 "O3'" ? ? ? 1_555 B 5CM 3 P ? ? B DG 14 B 5CM 15 1_555 ? ? ? ? ? ? ? 1.608 ? ? covale6 covale both ? B 5CM 3 "O3'" ? ? ? 1_555 B DG 4 P ? ? B 5CM 15 B DG 16 1_555 ? ? ? ? ? ? ? 1.562 ? ? covale7 covale both ? B DT 8 "O3'" ? ? ? 1_555 B 5CM 9 P ? ? B DT 20 B 5CM 21 1_555 ? ? ? ? ? ? ? 1.625 ? ? covale8 covale both ? B 5CM 9 "O3'" ? ? ? 1_555 B DG 10 P ? ? B 5CM 21 B DG 22 1_555 ? ? ? ? ? ? ? 1.601 ? ? metalc1 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 25 A HOH 137 1_555 ? ? ? ? ? ? ? 2.057 ? ? metalc2 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 25 A HOH 140 1_555 ? ? ? ? ? ? ? 1.980 ? ? metalc3 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 25 A HOH 141 1_555 ? ? ? ? ? ? ? 2.129 ? ? metalc4 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 25 B HOH 138 1_555 ? ? ? ? ? ? ? 1.929 ? ? metalc5 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 25 B HOH 139 1_555 ? ? ? ? ? ? ? 2.030 ? ? metalc6 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 25 B HOH 142 1_555 ? ? ? ? ? ? ? 1.926 ? ? hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 B DG 12 N1 ? ? A DC 1 B DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DG 12 O6 ? ? A DC 1 B DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 B DG 12 N2 ? ? A DC 1 B DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DG 2 N1 ? ? ? 1_555 B DC 11 N3 ? ? A DG 2 B DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DG 2 N2 ? ? ? 1_555 B DC 11 O2 ? ? A DG 2 B DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B DC 11 N4 ? ? A DG 2 B DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A 5CM 3 N3 ? ? ? 1_555 B DG 10 N1 ? ? A 5CM 3 B DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A 5CM 3 N4 ? ? ? 1_555 B DG 10 O6 ? ? A 5CM 3 B DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A 5CM 3 O2 ? ? ? 1_555 B DG 10 N2 ? ? A 5CM 3 B DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 4 N1 ? ? ? 1_555 B 5CM 9 N3 ? ? A DG 4 B 5CM 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 4 N2 ? ? ? 1_555 B 5CM 9 O2 ? ? A DG 4 B 5CM 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B 5CM 9 N4 ? ? A DG 4 B 5CM 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DA 5 N1 ? ? ? 1_555 B DT 8 N3 ? ? A DA 5 B DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DA 5 N6 ? ? ? 1_555 B DT 8 O4 ? ? A DA 5 B DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DA 6 N1 ? ? ? 1_555 B DT 7 N3 ? ? A DA 6 B DT 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DA 6 N6 ? ? ? 1_555 B DT 7 O4 ? ? A DA 6 B DT 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DT 7 N3 ? ? ? 1_555 B DA 6 N1 ? ? A DT 7 B DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DT 7 O4 ? ? ? 1_555 B DA 6 N6 ? ? A DT 7 B DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DT 8 N3 ? ? ? 1_555 B DA 5 N1 ? ? A DT 8 B DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DT 8 O4 ? ? ? 1_555 B DA 5 N6 ? ? A DT 8 B DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A 5CM 9 N3 ? ? ? 1_555 B DG 4 N1 ? ? A 5CM 9 B DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A 5CM 9 N4 ? ? ? 1_555 B DG 4 O6 ? ? A 5CM 9 B DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A 5CM 9 O2 ? ? ? 1_555 B DG 4 N2 ? ? A 5CM 9 B DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DG 10 N1 ? ? ? 1_555 B 5CM 3 N3 ? ? A DG 10 B 5CM 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DG 10 N2 ? ? ? 1_555 B 5CM 3 O2 ? ? A DG 10 B 5CM 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DG 10 O6 ? ? ? 1_555 B 5CM 3 N4 ? ? A DG 10 B 5CM 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DC 11 N3 ? ? ? 1_555 B DG 2 N1 ? ? A DC 11 B DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DC 11 N4 ? ? ? 1_555 B DG 2 O6 ? ? A DC 11 B DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DC 11 O2 ? ? ? 1_555 B DG 2 N2 ? ? A DC 11 B DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DG 12 N1 ? ? ? 1_555 B DC 1 N3 ? ? A DG 12 B DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DG 12 N2 ? ? ? 1_555 B DC 1 O2 ? ? A DG 12 B DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DG 12 O6 ? ? ? 1_555 B DC 1 N4 ? ? A DG 12 B DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? D HOH . ? A HOH 137 ? 1_555 MG ? C MG . ? A MG 25 ? 1_555 O ? D HOH . ? A HOH 140 ? 1_555 86.5 ? 2 O ? D HOH . ? A HOH 137 ? 1_555 MG ? C MG . ? A MG 25 ? 1_555 O ? D HOH . ? A HOH 141 ? 1_555 88.2 ? 3 O ? D HOH . ? A HOH 140 ? 1_555 MG ? C MG . ? A MG 25 ? 1_555 O ? D HOH . ? A HOH 141 ? 1_555 81.7 ? 4 O ? D HOH . ? A HOH 137 ? 1_555 MG ? C MG . ? A MG 25 ? 1_555 O ? E HOH . ? B HOH 138 ? 1_555 176.8 ? 5 O ? D HOH . ? A HOH 140 ? 1_555 MG ? C MG . ? A MG 25 ? 1_555 O ? E HOH . ? B HOH 138 ? 1_555 94.6 ? 6 O ? D HOH . ? A HOH 141 ? 1_555 MG ? C MG . ? A MG 25 ? 1_555 O ? E HOH . ? B HOH 138 ? 1_555 88.9 ? 7 O ? D HOH . ? A HOH 137 ? 1_555 MG ? C MG . ? A MG 25 ? 1_555 O ? E HOH . ? B HOH 139 ? 1_555 89.4 ? 8 O ? D HOH . ? A HOH 140 ? 1_555 MG ? C MG . ? A MG 25 ? 1_555 O ? E HOH . ? B HOH 139 ? 1_555 170.2 ? 9 O ? D HOH . ? A HOH 141 ? 1_555 MG ? C MG . ? A MG 25 ? 1_555 O ? E HOH . ? B HOH 139 ? 1_555 89.3 ? 10 O ? E HOH . ? B HOH 138 ? 1_555 MG ? C MG . ? A MG 25 ? 1_555 O ? E HOH . ? B HOH 139 ? 1_555 89.0 ? 11 O ? D HOH . ? A HOH 137 ? 1_555 MG ? C MG . ? A MG 25 ? 1_555 O ? E HOH . ? B HOH 142 ? 1_555 90.3 ? 12 O ? D HOH . ? A HOH 140 ? 1_555 MG ? C MG . ? A MG 25 ? 1_555 O ? E HOH . ? B HOH 142 ? 1_555 96.0 ? 13 O ? D HOH . ? A HOH 141 ? 1_555 MG ? C MG . ? A MG 25 ? 1_555 O ? E HOH . ? B HOH 142 ? 1_555 177.3 ? 14 O ? E HOH . ? B HOH 138 ? 1_555 MG ? C MG . ? A MG 25 ? 1_555 O ? E HOH . ? B HOH 142 ? 1_555 92.6 ? 15 O ? E HOH . ? B HOH 139 ? 1_555 MG ? C MG . ? A MG 25 ? 1_555 O ? E HOH . ? B HOH 142 ? 1_555 93.0 ? # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id MG _struct_site.pdbx_auth_seq_id 25 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 6 _struct_site.details 'BINDING SITE FOR RESIDUE MG A 25' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 HOH D . ? HOH A 137 . ? 1_555 ? 2 AC1 6 HOH D . ? HOH A 140 . ? 1_555 ? 3 AC1 6 HOH D . ? HOH A 141 . ? 1_555 ? 4 AC1 6 HOH E . ? HOH B 138 . ? 1_555 ? 5 AC1 6 HOH E . ? HOH B 139 . ? 1_555 ? 6 AC1 6 HOH E . ? HOH B 142 . ? 1_555 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 31 ? ? O B HOH 59 ? ? 2.07 2 1 "O4'" B DC 13 ? ? O B HOH 52 ? ? 2.11 3 1 OP1 A DA 6 ? ? O A HOH 34 ? ? 2.12 4 1 OP2 A DC 11 ? ? O A HOH 97 ? ? 2.13 5 1 O A HOH 107 ? ? O A HOH 126 ? ? 2.19 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "O4'" A DC 1 ? ? "C4'" A DC 1 ? ? 1.380 1.446 -0.066 0.010 N 2 1 C5 A DG 2 ? ? N7 A DG 2 ? ? 1.430 1.388 0.042 0.006 N 3 1 N9 A DG 2 ? ? C4 A DG 2 ? ? 1.321 1.375 -0.054 0.008 N 4 1 "O3'" A DG 4 ? ? "C3'" A DG 4 ? ? 1.382 1.419 -0.037 0.006 N 5 1 N7 A DG 4 ? ? C8 A DG 4 ? ? 1.351 1.305 0.046 0.006 N 6 1 P A DG 10 ? ? "O5'" A DG 10 ? ? 1.657 1.593 0.064 0.010 N 7 1 C8 A DG 10 ? ? N9 A DG 10 ? ? 1.329 1.374 -0.045 0.007 N 8 1 "O4'" A DG 12 ? ? "C4'" A DG 12 ? ? 1.381 1.446 -0.065 0.010 N 9 1 "O4'" B DG 16 ? ? "C1'" B DG 16 ? ? 1.489 1.420 0.069 0.011 N 10 1 "O4'" B DG 16 ? ? "C4'" B DG 16 ? ? 1.351 1.446 -0.095 0.010 N 11 1 C6 B DA 18 ? ? N1 B DA 18 ? ? 1.399 1.351 0.048 0.007 N 12 1 C5 B DA 18 ? ? N7 B DA 18 ? ? 1.428 1.388 0.040 0.006 N 13 1 "O4'" B DT 19 ? ? "C1'" B DT 19 ? ? 1.506 1.420 0.086 0.011 N 14 1 C2 B DT 19 ? ? N3 B DT 19 ? ? 1.321 1.373 -0.052 0.008 N 15 1 N3 B DC 23 ? ? C4 B DC 23 ? ? 1.385 1.335 0.050 0.007 N 16 1 "O3'" B DC 23 ? ? P B DG 24 ? ? 1.686 1.607 0.079 0.012 Y # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DC 1 ? ? "C4'" A DC 1 ? ? "C3'" A DC 1 ? ? 101.48 104.50 -3.02 0.40 N 2 1 "C1'" A DC 1 ? ? "O4'" A DC 1 ? ? "C4'" A DC 1 ? ? 115.58 110.30 5.28 0.70 N 3 1 "C4'" A DC 1 ? ? "C3'" A DC 1 ? ? "C2'" A DC 1 ? ? 96.61 102.20 -5.59 0.70 N 4 1 "C3'" A DC 1 ? ? "C2'" A DC 1 ? ? "C1'" A DC 1 ? ? 97.16 102.40 -5.24 0.80 N 5 1 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? "C2'" A DC 1 ? ? 95.99 105.90 -9.91 0.80 N 6 1 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 121.04 108.30 12.74 0.30 N 7 1 C6 A DC 1 ? ? N1 A DC 1 ? ? C2 A DC 1 ? ? 117.70 120.30 -2.60 0.40 N 8 1 N3 A DC 1 ? ? C4 A DC 1 ? ? C5 A DC 1 ? ? 119.30 121.90 -2.60 0.40 N 9 1 N1 A DC 1 ? ? C2 A DC 1 ? ? O2 A DC 1 ? ? 126.15 118.90 7.25 0.60 N 10 1 N3 A DC 1 ? ? C2 A DC 1 ? ? O2 A DC 1 ? ? 113.36 121.90 -8.54 0.70 N 11 1 "C5'" A DG 2 ? ? "C4'" A DG 2 ? ? "C3'" A DG 2 ? ? 124.01 115.70 8.31 1.20 N 12 1 "C3'" A DG 2 ? ? "C2'" A DG 2 ? ? "C1'" A DG 2 ? ? 97.56 102.40 -4.84 0.80 N 13 1 C6 A DG 2 ? ? N1 A DG 2 ? ? C2 A DG 2 ? ? 118.06 125.10 -7.04 0.60 N 14 1 N1 A DG 2 ? ? C2 A DG 2 ? ? N3 A DG 2 ? ? 129.31 123.90 5.41 0.60 N 15 1 C5 A DG 2 ? ? C6 A DG 2 ? ? N1 A DG 2 ? ? 116.12 111.50 4.62 0.50 N 16 1 C5 A DG 2 ? ? N7 A DG 2 ? ? C8 A DG 2 ? ? 99.57 104.30 -4.73 0.50 N 17 1 N7 A DG 2 ? ? C8 A DG 2 ? ? N9 A DG 2 ? ? 117.43 113.10 4.33 0.50 N 18 1 C8 A DG 2 ? ? N9 A DG 2 ? ? C4 A DG 2 ? ? 103.77 106.40 -2.63 0.40 N 19 1 N3 A DG 2 ? ? C2 A DG 2 ? ? N2 A DG 2 ? ? 111.92 119.90 -7.98 0.70 N 20 1 C5 A DG 2 ? ? C6 A DG 2 ? ? O6 A DG 2 ? ? 120.68 128.60 -7.92 0.60 N 21 1 "C3'" A DG 2 ? ? "O3'" A DG 2 ? ? P A 5CM 3 ? ? 140.91 119.70 21.21 1.20 Y 22 1 "O5'" A DG 4 ? ? "C5'" A DG 4 ? ? "C4'" A DG 4 ? ? 99.75 109.40 -9.65 0.80 N 23 1 "C3'" A DG 4 ? ? "C2'" A DG 4 ? ? "C1'" A DG 4 ? ? 94.34 102.40 -8.06 0.80 N 24 1 C6 A DG 4 ? ? N1 A DG 4 ? ? C2 A DG 4 ? ? 118.78 125.10 -6.32 0.60 N 25 1 N1 A DG 4 ? ? C2 A DG 4 ? ? N3 A DG 4 ? ? 128.93 123.90 5.03 0.60 N 26 1 C5 A DG 4 ? ? C6 A DG 4 ? ? N1 A DG 4 ? ? 116.05 111.50 4.55 0.50 N 27 1 N3 A DG 4 ? ? C2 A DG 4 ? ? N2 A DG 4 ? ? 114.47 119.90 -5.43 0.70 N 28 1 C5 A DG 4 ? ? C6 A DG 4 ? ? O6 A DG 4 ? ? 123.69 128.60 -4.91 0.60 N 29 1 "C3'" A DG 4 ? ? "O3'" A DG 4 ? ? P A DA 5 ? ? 141.85 119.70 22.15 1.20 Y 30 1 "O5'" A DA 5 ? ? P A DA 5 ? ? OP1 A DA 5 ? ? 100.20 105.70 -5.50 0.90 N 31 1 "O5'" A DA 5 ? ? P A DA 5 ? ? OP2 A DA 5 ? ? 119.56 110.70 8.86 1.20 N 32 1 "O5'" A DA 5 ? ? "C5'" A DA 5 ? ? "C4'" A DA 5 ? ? 103.17 109.40 -6.23 0.80 N 33 1 P A DA 5 ? ? "O5'" A DA 5 ? ? "C5'" A DA 5 ? ? 136.16 120.90 15.26 1.60 N 34 1 "C1'" A DA 5 ? ? "O4'" A DA 5 ? ? "C4'" A DA 5 ? ? 102.57 110.10 -7.53 1.00 N 35 1 "O4'" A DA 5 ? ? "C1'" A DA 5 ? ? N9 A DA 5 ? ? 98.82 108.00 -9.18 0.70 N 36 1 C6 A DA 5 ? ? N1 A DA 5 ? ? C2 A DA 5 ? ? 128.73 118.60 10.13 0.60 N 37 1 N1 A DA 5 ? ? C2 A DA 5 ? ? N3 A DA 5 ? ? 120.98 129.30 -8.32 0.50 N 38 1 C5 A DA 5 ? ? C6 A DA 5 ? ? N1 A DA 5 ? ? 112.47 117.70 -5.23 0.50 N 39 1 N1 A DA 5 ? ? C6 A DA 5 ? ? N6 A DA 5 ? ? 122.96 118.60 4.36 0.60 N 40 1 "C3'" A DA 5 ? ? "O3'" A DA 5 ? ? P A DA 6 ? ? 132.13 119.70 12.43 1.20 Y 41 1 C5 A DA 6 ? ? C6 A DA 6 ? ? N1 A DA 6 ? ? 113.70 117.70 -4.00 0.50 N 42 1 "C3'" A DA 6 ? ? "O3'" A DA 6 ? ? P A DT 7 ? ? 134.93 119.70 15.23 1.20 Y 43 1 "O5'" A DT 7 ? ? "C5'" A DT 7 ? ? "C4'" A DT 7 ? ? 102.77 109.40 -6.63 0.80 N 44 1 "C1'" A DT 7 ? ? "O4'" A DT 7 ? ? "C4'" A DT 7 ? ? 99.53 110.10 -10.57 1.00 N 45 1 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 102.79 108.00 -5.21 0.70 N 46 1 N3 A DT 7 ? ? C4 A DT 7 ? ? O4 A DT 7 ? ? 115.78 119.90 -4.12 0.60 N 47 1 C4 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 124.99 119.00 5.99 0.60 N 48 1 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 116.09 122.90 -6.81 0.60 N 49 1 "C3'" A DT 7 ? ? "O3'" A DT 7 ? ? P A DT 8 ? ? 134.45 119.70 14.75 1.20 Y 50 1 C2 A DT 8 ? ? N3 A DT 8 ? ? C4 A DT 8 ? ? 121.12 127.20 -6.08 0.60 N 51 1 N3 A DT 8 ? ? C4 A DT 8 ? ? C5 A DT 8 ? ? 120.78 115.20 5.58 0.60 N 52 1 C5 A DT 8 ? ? C6 A DT 8 ? ? N1 A DT 8 ? ? 119.95 123.70 -3.75 0.60 N 53 1 "C3'" A 5CM 9 ? ? "O3'" A 5CM 9 ? ? P A DG 10 ? ? 131.08 119.70 11.38 1.20 Y 54 1 "O5'" A DG 10 ? ? "C5'" A DG 10 ? ? "C4'" A DG 10 ? ? 101.60 109.40 -7.80 0.80 N 55 1 "C1'" A DG 10 ? ? "O4'" A DG 10 ? ? "C4'" A DG 10 ? ? 103.46 110.10 -6.64 1.00 N 56 1 "C3'" A DG 10 ? ? "C2'" A DG 10 ? ? "C1'" A DG 10 ? ? 92.98 102.40 -9.42 0.80 N 57 1 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? "C2'" A DG 10 ? ? 98.49 105.90 -7.41 0.80 N 58 1 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 114.21 108.30 5.91 0.30 N 59 1 C6 A DG 10 ? ? N1 A DG 10 ? ? C2 A DG 10 ? ? 118.59 125.10 -6.51 0.60 N 60 1 N1 A DG 10 ? ? C2 A DG 10 ? ? N3 A DG 10 ? ? 129.06 123.90 5.16 0.60 N 61 1 C5 A DG 10 ? ? C6 A DG 10 ? ? N1 A DG 10 ? ? 115.94 111.50 4.44 0.50 N 62 1 C4 A DG 10 ? ? C5 A DG 10 ? ? N7 A DG 10 ? ? 108.13 110.80 -2.67 0.40 N 63 1 C8 A DG 10 ? ? N9 A DG 10 ? ? C4 A DG 10 ? ? 102.92 106.40 -3.48 0.40 N 64 1 N9 A DG 10 ? ? C4 A DG 10 ? ? C5 A DG 10 ? ? 108.99 105.40 3.59 0.40 N 65 1 N3 A DG 10 ? ? C2 A DG 10 ? ? N2 A DG 10 ? ? 112.71 119.90 -7.19 0.70 N 66 1 "O5'" A DC 11 ? ? P A DC 11 ? ? OP2 A DC 11 ? ? 123.49 110.70 12.79 1.20 N 67 1 "O5'" A DC 11 ? ? "C5'" A DC 11 ? ? "C4'" A DC 11 ? ? 102.32 109.40 -7.08 0.80 N 68 1 "C5'" A DC 11 ? ? "C4'" A DC 11 ? ? "O4'" A DC 11 ? ? 117.04 109.80 7.24 1.10 N 69 1 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? "C2'" A DC 11 ? ? 101.04 105.90 -4.86 0.80 N 70 1 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? N1 A DC 11 ? ? 114.62 108.30 6.32 0.30 N 71 1 C6 A DC 11 ? ? N1 A DC 11 ? ? C2 A DC 11 ? ? 117.58 120.30 -2.72 0.40 N 72 1 C2 A DC 11 ? ? N3 A DC 11 ? ? C4 A DC 11 ? ? 123.42 119.90 3.52 0.50 N 73 1 C5 A DC 11 ? ? C6 A DC 11 ? ? N1 A DC 11 ? ? 124.57 121.00 3.57 0.50 N 74 1 "C3'" A DC 11 ? ? "O3'" A DC 11 ? ? P A DG 12 ? ? 127.84 119.70 8.14 1.20 Y 75 1 "O5'" A DG 12 ? ? "C5'" A DG 12 ? ? "C4'" A DG 12 ? ? 102.61 109.40 -6.79 0.80 N 76 1 C6 A DG 12 ? ? N1 A DG 12 ? ? C2 A DG 12 ? ? 118.16 125.10 -6.94 0.60 N 77 1 N1 A DG 12 ? ? C2 A DG 12 ? ? N3 A DG 12 ? ? 128.08 123.90 4.18 0.60 N 78 1 C5 A DG 12 ? ? C6 A DG 12 ? ? N1 A DG 12 ? ? 116.50 111.50 5.00 0.50 N 79 1 N3 A DG 12 ? ? C2 A DG 12 ? ? N2 A DG 12 ? ? 114.90 119.90 -5.00 0.70 N 80 1 N1 A DG 12 ? ? C6 A DG 12 ? ? O6 A DG 12 ? ? 115.04 119.90 -4.86 0.60 N 81 1 "O4'" B DC 13 ? ? "C1'" B DC 13 ? ? N1 B DC 13 ? ? 116.88 108.30 8.58 0.30 N 82 1 C4 B DC 13 ? ? C5 B DC 13 ? ? C6 B DC 13 ? ? 113.73 117.40 -3.67 0.50 N 83 1 "O5'" B DG 14 ? ? "C5'" B DG 14 ? ? "C4'" B DG 14 ? ? 102.74 109.40 -6.66 0.80 N 84 1 P B DG 14 ? ? "O5'" B DG 14 ? ? "C5'" B DG 14 ? ? 111.04 120.90 -9.86 1.60 N 85 1 C5 B DG 14 ? ? C6 B DG 14 ? ? O6 B DG 14 ? ? 122.73 128.60 -5.87 0.60 N 86 1 "C3'" B 5CM 15 ? ? "O3'" B 5CM 15 ? ? P B DG 16 ? ? 136.28 119.70 16.58 1.20 Y 87 1 "O4'" B DG 16 ? ? "C1'" B DG 16 ? ? N9 B DG 16 ? ? 112.67 108.30 4.37 0.30 N 88 1 N1 B DG 16 ? ? C2 B DG 16 ? ? N3 B DG 16 ? ? 127.59 123.90 3.69 0.60 N 89 1 C2 B DG 16 ? ? N3 B DG 16 ? ? C4 B DG 16 ? ? 107.86 111.90 -4.04 0.50 N 90 1 N1 B DG 16 ? ? C6 B DG 16 ? ? O6 B DG 16 ? ? 116.13 119.90 -3.77 0.60 N 91 1 "C3'" B DG 16 ? ? "O3'" B DG 16 ? ? P B DA 17 ? ? 131.29 119.70 11.59 1.20 Y 92 1 "O5'" B DA 17 ? ? P B DA 17 ? ? OP2 B DA 17 ? ? 118.31 110.70 7.61 1.20 N 93 1 P B DA 17 ? ? "O5'" B DA 17 ? ? "C5'" B DA 17 ? ? 130.78 120.90 9.88 1.60 N 94 1 "O4'" B DA 17 ? ? "C4'" B DA 17 ? ? "C3'" B DA 17 ? ? 100.33 104.50 -4.17 0.40 N 95 1 C6 B DA 17 ? ? N1 B DA 17 ? ? C2 B DA 17 ? ? 123.45 118.60 4.85 0.60 N 96 1 N1 B DA 17 ? ? C2 B DA 17 ? ? N3 B DA 17 ? ? 125.13 129.30 -4.17 0.50 N 97 1 C5 B DA 17 ? ? C6 B DA 17 ? ? N1 B DA 17 ? ? 114.05 117.70 -3.65 0.50 N 98 1 N1 B DA 17 ? ? C6 B DA 17 ? ? N6 B DA 17 ? ? 124.16 118.60 5.56 0.60 N 99 1 "O4'" B DA 18 ? ? "C1'" B DA 18 ? ? N9 B DA 18 ? ? 103.53 108.00 -4.47 0.70 N 100 1 C6 B DA 18 ? ? N1 B DA 18 ? ? C2 B DA 18 ? ? 122.35 118.60 3.75 0.60 N 101 1 N1 B DA 18 ? ? C2 B DA 18 ? ? N3 B DA 18 ? ? 123.99 129.30 -5.31 0.50 N 102 1 C5 B DA 18 ? ? N7 B DA 18 ? ? C8 B DA 18 ? ? 100.75 103.90 -3.15 0.50 N 103 1 "C3'" B DA 18 ? ? "O3'" B DA 18 ? ? P B DT 19 ? ? 130.14 119.70 10.44 1.20 Y 104 1 "O5'" B DT 19 ? ? "C5'" B DT 19 ? ? "C4'" B DT 19 ? ? 103.88 109.40 -5.52 0.80 N 105 1 "C1'" B DT 19 ? ? "O4'" B DT 19 ? ? "C4'" B DT 19 ? ? 103.06 110.10 -7.04 1.00 N 106 1 "O4'" B DT 19 ? ? "C1'" B DT 19 ? ? N1 B DT 19 ? ? 102.02 108.00 -5.98 0.70 N 107 1 C4 B DT 19 ? ? C5 B DT 19 ? ? C7 B DT 19 ? ? 123.54 119.00 4.54 0.60 N 108 1 C6 B DT 19 ? ? C5 B DT 19 ? ? C7 B DT 19 ? ? 117.77 122.90 -5.13 0.60 N 109 1 "O5'" B DT 20 ? ? P B DT 20 ? ? OP1 B DT 20 ? ? 120.66 110.70 9.96 1.20 N 110 1 "O4'" B DT 20 ? ? "C1'" B DT 20 ? ? N1 B DT 20 ? ? 102.65 108.00 -5.35 0.70 N 111 1 "C3'" B DT 20 ? ? "O3'" B DT 20 ? ? P B 5CM 21 ? ? 132.02 119.70 12.32 1.20 Y 112 1 "C3'" B 5CM 21 ? ? "O3'" B 5CM 21 ? ? P B DG 22 ? ? 131.44 119.70 11.74 1.20 Y 113 1 "O5'" B DG 22 ? ? "C5'" B DG 22 ? ? "C4'" B DG 22 ? ? 99.01 109.40 -10.39 0.80 N 114 1 P B DG 22 ? ? "O5'" B DG 22 ? ? "C5'" B DG 22 ? ? 107.11 120.90 -13.79 1.60 N 115 1 "C4'" B DG 22 ? ? "C3'" B DG 22 ? ? "C2'" B DG 22 ? ? 97.58 102.20 -4.62 0.70 N 116 1 "C3'" B DG 22 ? ? "C2'" B DG 22 ? ? "C1'" B DG 22 ? ? 96.69 102.40 -5.71 0.80 N 117 1 "O4'" B DG 22 ? ? "C1'" B DG 22 ? ? "C2'" B DG 22 ? ? 99.28 105.90 -6.62 0.80 N 118 1 C6 B DG 22 ? ? N1 B DG 22 ? ? C2 B DG 22 ? ? 118.67 125.10 -6.43 0.60 N 119 1 N1 B DG 22 ? ? C2 B DG 22 ? ? N3 B DG 22 ? ? 128.68 123.90 4.78 0.60 N 120 1 C5 B DG 22 ? ? C6 B DG 22 ? ? N1 B DG 22 ? ? 115.78 111.50 4.28 0.50 N 121 1 "C3'" B DG 22 ? ? "O3'" B DG 22 ? ? P B DC 23 ? ? 128.62 119.70 8.92 1.20 Y 122 1 OP1 B DC 23 ? ? P B DC 23 ? ? OP2 B DC 23 ? ? 109.97 119.60 -9.63 1.50 N 123 1 P B DC 23 ? ? "O5'" B DC 23 ? ? "C5'" B DC 23 ? ? 136.34 120.90 15.44 1.60 N 124 1 "O4'" B DC 23 ? ? "C4'" B DC 23 ? ? "C3'" B DC 23 ? ? 102.00 104.50 -2.50 0.40 N 125 1 "O5'" B DG 24 ? ? "C5'" B DG 24 ? ? "C4'" B DG 24 ? ? 102.73 109.40 -6.67 0.80 N 126 1 "O4'" B DG 24 ? ? "C1'" B DG 24 ? ? N9 B DG 24 ? ? 112.53 108.30 4.23 0.30 N 127 1 C6 B DG 24 ? ? N1 B DG 24 ? ? C2 B DG 24 ? ? 117.98 125.10 -7.12 0.60 N 128 1 C5 B DG 24 ? ? C6 B DG 24 ? ? N1 B DG 24 ? ? 117.10 111.50 5.60 0.50 N # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A 5CM 3 A 5CM 3 ? DC ? 2 A 5CM 9 A 5CM 9 ? DC ? 3 B 5CM 3 B 5CM 15 ? DC ? 4 B 5CM 9 B 5CM 21 ? DC ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 5CM N1 N N N 1 5CM C2 C N N 2 5CM N3 N N N 3 5CM C4 C N N 4 5CM C5 C N N 5 5CM C5A C N N 6 5CM C6 C N N 7 5CM O2 O N N 8 5CM N4 N N N 9 5CM "C1'" C N R 10 5CM "C2'" C N N 11 5CM "C3'" C N S 12 5CM "C4'" C N R 13 5CM "O4'" O N N 14 5CM "O3'" O N N 15 5CM "C5'" C N N 16 5CM "O5'" O N N 17 5CM P P N N 18 5CM OP1 O N N 19 5CM OP2 O N N 20 5CM OP3 O N N 21 5CM H5A1 H N N 22 5CM H5A2 H N N 23 5CM H5A3 H N N 24 5CM H6 H N N 25 5CM HN41 H N N 26 5CM HN42 H N N 27 5CM "H1'" H N N 28 5CM "H2'" H N N 29 5CM "H2''" H N N 30 5CM "H3'" H N N 31 5CM "H4'" H N N 32 5CM "HO3'" H N N 33 5CM "H5'" H N N 34 5CM "H5''" H N N 35 5CM HOP2 H N N 36 5CM HOP3 H N N 37 DA OP3 O N N 38 DA P P N N 39 DA OP1 O N N 40 DA OP2 O N N 41 DA "O5'" O N N 42 DA "C5'" C N N 43 DA "C4'" C N R 44 DA "O4'" O N N 45 DA "C3'" C N S 46 DA "O3'" O N N 47 DA "C2'" C N N 48 DA "C1'" C N R 49 DA N9 N Y N 50 DA C8 C Y N 51 DA N7 N Y N 52 DA C5 C Y N 53 DA C6 C Y N 54 DA N6 N N N 55 DA N1 N Y N 56 DA C2 C Y N 57 DA N3 N Y N 58 DA C4 C Y N 59 DA HOP3 H N N 60 DA HOP2 H N N 61 DA "H5'" H N N 62 DA "H5''" H N N 63 DA "H4'" H N N 64 DA "H3'" H N N 65 DA "HO3'" H N N 66 DA "H2'" H N N 67 DA "H2''" H N N 68 DA "H1'" H N N 69 DA H8 H N N 70 DA H61 H N N 71 DA H62 H N N 72 DA H2 H N N 73 DC OP3 O N N 74 DC P P N N 75 DC OP1 O N N 76 DC OP2 O N N 77 DC "O5'" O N N 78 DC "C5'" C N N 79 DC "C4'" C N R 80 DC "O4'" O N N 81 DC "C3'" C N S 82 DC "O3'" O N N 83 DC "C2'" C N N 84 DC "C1'" C N R 85 DC N1 N N N 86 DC C2 C N N 87 DC O2 O N N 88 DC N3 N N N 89 DC C4 C N N 90 DC N4 N N N 91 DC C5 C N N 92 DC C6 C N N 93 DC HOP3 H N N 94 DC HOP2 H N N 95 DC "H5'" H N N 96 DC "H5''" H N N 97 DC "H4'" H N N 98 DC "H3'" H N N 99 DC "HO3'" H N N 100 DC "H2'" H N N 101 DC "H2''" H N N 102 DC "H1'" H N N 103 DC H41 H N N 104 DC H42 H N N 105 DC H5 H N N 106 DC H6 H N N 107 DG OP3 O N N 108 DG P P N N 109 DG OP1 O N N 110 DG OP2 O N N 111 DG "O5'" O N N 112 DG "C5'" C N N 113 DG "C4'" C N R 114 DG "O4'" O N N 115 DG "C3'" C N S 116 DG "O3'" O N N 117 DG "C2'" C N N 118 DG "C1'" C N R 119 DG N9 N Y N 120 DG C8 C Y N 121 DG N7 N Y N 122 DG C5 C Y N 123 DG C6 C N N 124 DG O6 O N N 125 DG N1 N N N 126 DG C2 C N N 127 DG N2 N N N 128 DG N3 N N N 129 DG C4 C Y N 130 DG HOP3 H N N 131 DG HOP2 H N N 132 DG "H5'" H N N 133 DG "H5''" H N N 134 DG "H4'" H N N 135 DG "H3'" H N N 136 DG "HO3'" H N N 137 DG "H2'" H N N 138 DG "H2''" H N N 139 DG "H1'" H N N 140 DG H8 H N N 141 DG H1 H N N 142 DG H21 H N N 143 DG H22 H N N 144 DT OP3 O N N 145 DT P P N N 146 DT OP1 O N N 147 DT OP2 O N N 148 DT "O5'" O N N 149 DT "C5'" C N N 150 DT "C4'" C N R 151 DT "O4'" O N N 152 DT "C3'" C N S 153 DT "O3'" O N N 154 DT "C2'" C N N 155 DT "C1'" C N R 156 DT N1 N N N 157 DT C2 C N N 158 DT O2 O N N 159 DT N3 N N N 160 DT C4 C N N 161 DT O4 O N N 162 DT C5 C N N 163 DT C7 C N N 164 DT C6 C N N 165 DT HOP3 H N N 166 DT HOP2 H N N 167 DT "H5'" H N N 168 DT "H5''" H N N 169 DT "H4'" H N N 170 DT "H3'" H N N 171 DT "HO3'" H N N 172 DT "H2'" H N N 173 DT "H2''" H N N 174 DT "H1'" H N N 175 DT H3 H N N 176 DT H71 H N N 177 DT H72 H N N 178 DT H73 H N N 179 DT H6 H N N 180 HOH O O N N 181 HOH H1 H N N 182 HOH H2 H N N 183 MG MG MG N N 184 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5CM N1 C2 sing N N 1 5CM N1 C6 sing N N 2 5CM N1 "C1'" sing N N 3 5CM C2 N3 sing N N 4 5CM C2 O2 doub N N 5 5CM N3 C4 doub N N 6 5CM C4 C5 sing N N 7 5CM C4 N4 sing N N 8 5CM C5 C5A sing N N 9 5CM C5 C6 doub N N 10 5CM C5A H5A1 sing N N 11 5CM C5A H5A2 sing N N 12 5CM C5A H5A3 sing N N 13 5CM C6 H6 sing N N 14 5CM N4 HN41 sing N N 15 5CM N4 HN42 sing N N 16 5CM "C1'" "C2'" sing N N 17 5CM "C1'" "O4'" sing N N 18 5CM "C1'" "H1'" sing N N 19 5CM "C2'" "C3'" sing N N 20 5CM "C2'" "H2'" sing N N 21 5CM "C2'" "H2''" sing N N 22 5CM "C3'" "C4'" sing N N 23 5CM "C3'" "O3'" sing N N 24 5CM "C3'" "H3'" sing N N 25 5CM "C4'" "O4'" sing N N 26 5CM "C4'" "C5'" sing N N 27 5CM "C4'" "H4'" sing N N 28 5CM "O3'" "HO3'" sing N N 29 5CM "C5'" "O5'" sing N N 30 5CM "C5'" "H5'" sing N N 31 5CM "C5'" "H5''" sing N N 32 5CM "O5'" P sing N N 33 5CM P OP1 doub N N 34 5CM P OP2 sing N N 35 5CM P OP3 sing N N 36 5CM OP2 HOP2 sing N N 37 5CM OP3 HOP3 sing N N 38 DA OP3 P sing N N 39 DA OP3 HOP3 sing N N 40 DA P OP1 doub N N 41 DA P OP2 sing N N 42 DA P "O5'" sing N N 43 DA OP2 HOP2 sing N N 44 DA "O5'" "C5'" sing N N 45 DA "C5'" "C4'" sing N N 46 DA "C5'" "H5'" sing N N 47 DA "C5'" "H5''" sing N N 48 DA "C4'" "O4'" sing N N 49 DA "C4'" "C3'" sing N N 50 DA "C4'" "H4'" sing N N 51 DA "O4'" "C1'" sing N N 52 DA "C3'" "O3'" sing N N 53 DA "C3'" "C2'" sing N N 54 DA "C3'" "H3'" sing N N 55 DA "O3'" "HO3'" sing N N 56 DA "C2'" "C1'" sing N N 57 DA "C2'" "H2'" sing N N 58 DA "C2'" "H2''" sing N N 59 DA "C1'" N9 sing N N 60 DA "C1'" "H1'" sing N N 61 DA N9 C8 sing Y N 62 DA N9 C4 sing Y N 63 DA C8 N7 doub Y N 64 DA C8 H8 sing N N 65 DA N7 C5 sing Y N 66 DA C5 C6 sing Y N 67 DA C5 C4 doub Y N 68 DA C6 N6 sing N N 69 DA C6 N1 doub Y N 70 DA N6 H61 sing N N 71 DA N6 H62 sing N N 72 DA N1 C2 sing Y N 73 DA C2 N3 doub Y N 74 DA C2 H2 sing N N 75 DA N3 C4 sing Y N 76 DC OP3 P sing N N 77 DC OP3 HOP3 sing N N 78 DC P OP1 doub N N 79 DC P OP2 sing N N 80 DC P "O5'" sing N N 81 DC OP2 HOP2 sing N N 82 DC "O5'" "C5'" sing N N 83 DC "C5'" "C4'" sing N N 84 DC "C5'" "H5'" sing N N 85 DC "C5'" "H5''" sing N N 86 DC "C4'" "O4'" sing N N 87 DC "C4'" "C3'" sing N N 88 DC "C4'" "H4'" sing N N 89 DC "O4'" "C1'" sing N N 90 DC "C3'" "O3'" sing N N 91 DC "C3'" "C2'" sing N N 92 DC "C3'" "H3'" sing N N 93 DC "O3'" "HO3'" sing N N 94 DC "C2'" "C1'" sing N N 95 DC "C2'" "H2'" sing N N 96 DC "C2'" "H2''" sing N N 97 DC "C1'" N1 sing N N 98 DC "C1'" "H1'" sing N N 99 DC N1 C2 sing N N 100 DC N1 C6 sing N N 101 DC C2 O2 doub N N 102 DC C2 N3 sing N N 103 DC N3 C4 doub N N 104 DC C4 N4 sing N N 105 DC C4 C5 sing N N 106 DC N4 H41 sing N N 107 DC N4 H42 sing N N 108 DC C5 C6 doub N N 109 DC C5 H5 sing N N 110 DC C6 H6 sing N N 111 DG OP3 P sing N N 112 DG OP3 HOP3 sing N N 113 DG P OP1 doub N N 114 DG P OP2 sing N N 115 DG P "O5'" sing N N 116 DG OP2 HOP2 sing N N 117 DG "O5'" "C5'" sing N N 118 DG "C5'" "C4'" sing N N 119 DG "C5'" "H5'" sing N N 120 DG "C5'" "H5''" sing N N 121 DG "C4'" "O4'" sing N N 122 DG "C4'" "C3'" sing N N 123 DG "C4'" "H4'" sing N N 124 DG "O4'" "C1'" sing N N 125 DG "C3'" "O3'" sing N N 126 DG "C3'" "C2'" sing N N 127 DG "C3'" "H3'" sing N N 128 DG "O3'" "HO3'" sing N N 129 DG "C2'" "C1'" sing N N 130 DG "C2'" "H2'" sing N N 131 DG "C2'" "H2''" sing N N 132 DG "C1'" N9 sing N N 133 DG "C1'" "H1'" sing N N 134 DG N9 C8 sing Y N 135 DG N9 C4 sing Y N 136 DG C8 N7 doub Y N 137 DG C8 H8 sing N N 138 DG N7 C5 sing Y N 139 DG C5 C6 sing N N 140 DG C5 C4 doub Y N 141 DG C6 O6 doub N N 142 DG C6 N1 sing N N 143 DG N1 C2 sing N N 144 DG N1 H1 sing N N 145 DG C2 N2 sing N N 146 DG C2 N3 doub N N 147 DG N2 H21 sing N N 148 DG N2 H22 sing N N 149 DG N3 C4 sing N N 150 DT OP3 P sing N N 151 DT OP3 HOP3 sing N N 152 DT P OP1 doub N N 153 DT P OP2 sing N N 154 DT P "O5'" sing N N 155 DT OP2 HOP2 sing N N 156 DT "O5'" "C5'" sing N N 157 DT "C5'" "C4'" sing N N 158 DT "C5'" "H5'" sing N N 159 DT "C5'" "H5''" sing N N 160 DT "C4'" "O4'" sing N N 161 DT "C4'" "C3'" sing N N 162 DT "C4'" "H4'" sing N N 163 DT "O4'" "C1'" sing N N 164 DT "C3'" "O3'" sing N N 165 DT "C3'" "C2'" sing N N 166 DT "C3'" "H3'" sing N N 167 DT "O3'" "HO3'" sing N N 168 DT "C2'" "C1'" sing N N 169 DT "C2'" "H2'" sing N N 170 DT "C2'" "H2''" sing N N 171 DT "C1'" N1 sing N N 172 DT "C1'" "H1'" sing N N 173 DT N1 C2 sing N N 174 DT N1 C6 sing N N 175 DT C2 O2 doub N N 176 DT C2 N3 sing N N 177 DT N3 C4 sing N N 178 DT N3 H3 sing N N 179 DT C4 O4 doub N N 180 DT C4 C5 sing N N 181 DT C5 C7 sing N N 182 DT C5 C6 doub N N 183 DT C7 H71 sing N N 184 DT C7 H72 sing N N 185 DT C7 H73 sing N N 186 DT C6 H6 sing N N 187 HOH O H1 sing N N 188 HOH O H2 sing N N 189 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 265D 'double helix' 265D 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 B DG 12 1_555 0.280 -0.268 0.320 3.946 -14.870 -1.868 1 A_DC1:DG24_B A 1 ? B 24 ? 19 1 1 A DG 2 1_555 B DC 11 1_555 -0.440 -0.376 0.203 4.691 -15.021 -3.560 2 A_DG2:DC23_B A 2 ? B 23 ? 19 1 1 A 5CM 3 1_555 B DG 10 1_555 -0.534 -0.265 0.026 -0.745 -4.878 -6.437 3 A_5CM3:DG22_B A 3 ? B 22 ? 19 1 1 A DG 4 1_555 B 5CM 9 1_555 -0.374 -0.348 -0.003 12.107 -6.968 2.694 4 A_DG4:5CM21_B A 4 ? B 21 ? 19 1 1 A DA 5 1_555 B DT 8 1_555 -0.092 -0.212 0.562 14.440 -17.655 3.800 5 A_DA5:DT20_B A 5 ? B 20 ? 20 1 1 A DA 6 1_555 B DT 7 1_555 0.324 -0.178 0.481 2.648 -15.991 4.283 6 A_DA6:DT19_B A 6 ? B 19 ? 20 1 1 A DT 7 1_555 B DA 6 1_555 -0.419 -0.357 0.269 1.192 -19.006 0.566 7 A_DT7:DA18_B A 7 ? B 18 ? 20 1 1 A DT 8 1_555 B DA 5 1_555 -0.215 -0.061 0.106 1.022 -10.732 8.010 8 A_DT8:DA17_B A 8 ? B 17 ? 20 1 1 A 5CM 9 1_555 B DG 4 1_555 0.091 -0.297 -0.018 -8.072 -8.820 -2.517 9 A_5CM9:DG16_B A 9 ? B 16 ? 19 1 1 A DG 10 1_555 B 5CM 3 1_555 0.102 -0.231 0.427 10.860 -5.637 -0.606 10 A_DG10:5CM15_B A 10 ? B 15 ? 19 1 1 A DC 11 1_555 B DG 2 1_555 -0.185 -0.401 0.389 1.536 -12.813 -8.251 11 A_DC11:DG14_B A 11 ? B 14 ? 19 1 1 A DG 12 1_555 B DC 1 1_555 0.319 -0.328 0.825 20.303 -3.178 -8.476 12 A_DG12:DC13_B A 12 ? B 13 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 B DG 12 1_555 A DG 2 1_555 B DC 11 1_555 -0.396 0.134 3.218 -0.759 7.282 33.526 -0.905 0.553 3.185 12.440 1.296 34.294 1 AA_DC1DG2:DC23DG24_BB A 1 ? B 24 ? A 2 ? B 23 ? 1 A DG 2 1_555 B DC 11 1_555 A 5CM 3 1_555 B DG 10 1_555 0.395 0.337 3.508 4.111 -9.704 40.373 1.568 -0.092 3.365 -13.779 -5.837 41.670 2 AA_DG25CM3:DG22DC23_BB A 2 ? B 23 ? A 3 ? B 22 ? 1 A 5CM 3 1_555 B DG 10 1_555 A DG 4 1_555 B 5CM 9 1_555 0.528 0.611 3.029 1.977 10.260 25.520 -1.151 -0.640 3.071 22.082 -4.255 27.543 3 AA_5CM3DG4:5CM21DG22_BB A 3 ? B 22 ? A 4 ? B 21 ? 1 A DG 4 1_555 B 5CM 9 1_555 A DA 5 1_555 B DT 8 1_555 -0.248 -0.320 3.138 -5.155 1.218 38.438 -0.626 -0.233 3.133 1.839 7.785 38.787 4 AA_DG4DA5:DT205CM21_BB A 4 ? B 21 ? A 5 ? B 20 ? 1 A DA 5 1_555 B DT 8 1_555 A DA 6 1_555 B DT 7 1_555 0.020 -0.293 3.479 0.932 -3.891 40.595 0.038 0.081 3.490 -5.592 -1.339 40.783 5 AA_DA5DA6:DT19DT20_BB A 5 ? B 20 ? A 6 ? B 19 ? 1 A DA 6 1_555 B DT 7 1_555 A DT 7 1_555 B DA 6 1_555 0.063 -0.713 3.196 2.888 0.475 30.280 -1.451 0.445 3.177 0.906 -5.513 30.417 6 AA_DA6DT7:DA18DT19_BB A 6 ? B 19 ? A 7 ? B 18 ? 1 A DT 7 1_555 B DA 6 1_555 A DT 8 1_555 B DA 5 1_555 0.147 -0.237 3.223 1.590 -4.736 36.284 0.267 -0.018 3.231 -7.561 -2.538 36.615 7 AA_DT7DT8:DA17DA18_BB A 7 ? B 18 ? A 8 ? B 17 ? 1 A DT 8 1_555 B DA 5 1_555 A 5CM 9 1_555 B DG 4 1_555 -0.202 -0.089 3.538 1.740 2.343 40.514 -0.410 0.500 3.516 3.378 -2.509 40.615 8 AA_DT85CM9:DG16DA17_BB A 8 ? B 17 ? A 9 ? B 16 ? 1 A 5CM 9 1_555 B DG 4 1_555 A DG 10 1_555 B 5CM 3 1_555 0.461 0.440 2.911 -5.737 -2.098 28.344 1.284 -2.025 2.728 -4.222 11.547 28.981 9 AA_5CM9DG10:5CM15DG16_BB A 9 ? B 16 ? A 10 ? B 15 ? 1 A DG 10 1_555 B 5CM 3 1_555 A DC 11 1_555 B DG 2 1_555 -1.280 0.298 3.609 -1.919 -7.665 37.624 1.508 1.681 3.542 -11.726 2.936 38.416 10 AA_DG10DC11:DG145CM15_BB A 10 ? B 15 ? A 11 ? B 14 ? 1 A DC 11 1_555 B DG 2 1_555 A DG 12 1_555 B DC 1 1_555 0.219 -0.073 2.888 -2.627 1.152 40.092 -0.222 -0.582 2.865 1.677 3.827 40.191 11 AA_DC11DG12:DC13DG14_BB A 11 ? B 14 ? A 12 ? B 13 ? # _atom_sites.entry_id 265D _atom_sites.fract_transf_matrix[1][1] 0.039330 _atom_sites.fract_transf_matrix[1][2] -0.000001 _atom_sites.fract_transf_matrix[1][3] -0.000001 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.024697 _atom_sites.fract_transf_matrix[2][3] -0.000001 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015309 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P # loop_