data_2B02 # _entry.id 2B02 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.351 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2B02 pdb_00002b02 10.2210/pdb2b02/pdb RCSB RCSB034506 ? ? WWPDB D_1000034506 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2B02 _pdbx_database_status.recvd_initial_deposition_date 2005-09-12 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lee, J.' 1 'Botuyan, M.V.' 2 'Nomine, Y.' 3 'Ohh, M.' 4 'Thompson, J.R.' 5 'Mer, G.' 6 # _citation.id primary _citation.title 'Crystal Structure and Binding Properties of ARNT PAS-B Heterodimerization Domain' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lee, J.' 1 ? primary 'Botuyan, M.V.' 2 ? primary 'Nomine, Y.' 3 ? primary 'Ohh, M.' 4 ? primary 'Thompson, J.R.' 5 ? primary 'Mer, G.' 6 ? # _cell.entry_id 2B02 _cell.length_a 55.321 _cell.length_b 61.610 _cell.length_c 76.711 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2B02 _symmetry.space_group_name_H-M 'I 2 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Aryl hydrocarbon receptor nuclear translocator' 14120.381 1 ? C358S 'PAS-B Domain' ? 2 water nat water 18.015 111 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'ARNT protein, Dioxin receptor, nuclear translocator, Hypoxia-inducible factor 1 beta, HIF-1 beta' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GH(MSE)SNVSQPTEFISRHNIEGIFTFVDHRCVATVGYQPQELLGKNIVEFCHPEDQQLLRDSFQQVVKLKGQVLSV (MSE)FRFRSKNQEWLW(MSE)RTSSFTFQNPYSDEIEYIICTNTNVKNSSQE ; _entity_poly.pdbx_seq_one_letter_code_can ;GHMSNVSQPTEFISRHNIEGIFTFVDHRCVATVGYQPQELLGKNIVEFCHPEDQQLLRDSFQQVVKLKGQVLSVMFRFRS KNQEWLWMRTSSFTFQNPYSDEIEYIICTNTNVKNSSQE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 HIS n 1 3 MSE n 1 4 SER n 1 5 ASN n 1 6 VAL n 1 7 SER n 1 8 GLN n 1 9 PRO n 1 10 THR n 1 11 GLU n 1 12 PHE n 1 13 ILE n 1 14 SER n 1 15 ARG n 1 16 HIS n 1 17 ASN n 1 18 ILE n 1 19 GLU n 1 20 GLY n 1 21 ILE n 1 22 PHE n 1 23 THR n 1 24 PHE n 1 25 VAL n 1 26 ASP n 1 27 HIS n 1 28 ARG n 1 29 CYS n 1 30 VAL n 1 31 ALA n 1 32 THR n 1 33 VAL n 1 34 GLY n 1 35 TYR n 1 36 GLN n 1 37 PRO n 1 38 GLN n 1 39 GLU n 1 40 LEU n 1 41 LEU n 1 42 GLY n 1 43 LYS n 1 44 ASN n 1 45 ILE n 1 46 VAL n 1 47 GLU n 1 48 PHE n 1 49 CYS n 1 50 HIS n 1 51 PRO n 1 52 GLU n 1 53 ASP n 1 54 GLN n 1 55 GLN n 1 56 LEU n 1 57 LEU n 1 58 ARG n 1 59 ASP n 1 60 SER n 1 61 PHE n 1 62 GLN n 1 63 GLN n 1 64 VAL n 1 65 VAL n 1 66 LYS n 1 67 LEU n 1 68 LYS n 1 69 GLY n 1 70 GLN n 1 71 VAL n 1 72 LEU n 1 73 SER n 1 74 VAL n 1 75 MSE n 1 76 PHE n 1 77 ARG n 1 78 PHE n 1 79 ARG n 1 80 SER n 1 81 LYS n 1 82 ASN n 1 83 GLN n 1 84 GLU n 1 85 TRP n 1 86 LEU n 1 87 TRP n 1 88 MSE n 1 89 ARG n 1 90 THR n 1 91 SER n 1 92 SER n 1 93 PHE n 1 94 THR n 1 95 PHE n 1 96 GLN n 1 97 ASN n 1 98 PRO n 1 99 TYR n 1 100 SER n 1 101 ASP n 1 102 GLU n 1 103 ILE n 1 104 GLU n 1 105 TYR n 1 106 ILE n 1 107 ILE n 1 108 CYS n 1 109 THR n 1 110 ASN n 1 111 THR n 1 112 ASN n 1 113 VAL n 1 114 LYS n 1 115 ASN n 1 116 SER n 1 117 SER n 1 118 GLN n 1 119 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene ARNT _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'B834(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code ARNT_HUMAN _struct_ref.pdbx_db_accession P27540 _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin 354 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2B02 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 119 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P27540 _struct_ref_seq.db_align_beg 354 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 470 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 354 _struct_ref_seq.pdbx_auth_seq_align_end 470 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2B02 GLY A 1 ? UNP P27540 ? ? 'cloning artifact' 352 1 1 2B02 HIS A 2 ? UNP P27540 ? ? 'cloning artifact' 353 2 1 2B02 MSE A 3 ? UNP P27540 MET 354 'modified residue' 354 3 1 2B02 SER A 7 ? UNP P27540 CYS 358 'engineered mutation' 358 4 1 2B02 MSE A 75 ? UNP P27540 MET 426 'modified residue' 426 5 1 2B02 MSE A 88 ? UNP P27540 MET 439 'modified residue' 439 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2B02 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.3 _exptl_crystal.density_percent_sol 47 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.65 _exptl_crystal_grow.pdbx_details 'Ammonium sulfate, PEG 400, HEPES, pH 8.65, VAPOR DIFFUSION, HANGING DROP, temperature 295K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type CUSTOM-MADE _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.96209 1.0 2 0.97932 1.0 3 0.97942 1.0 4 0.99503 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-BM' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-BM _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.96209, 0.97932, 0.97942, 0.99503' # _reflns.entry_id 2B02 _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 48.06 _reflns.d_resolution_high 1.50 _reflns.number_obs 4398 _reflns.number_all ? _reflns.percent_possible_obs 99.6 _reflns.pdbx_Rmerge_I_obs 0.04 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 396.7 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.6 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.50 _reflns_shell.d_res_low 1.55 _reflns_shell.percent_possible_all 99.3 _reflns_shell.Rmerge_I_obs 0.473 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 13.2 _reflns_shell.pdbx_redundancy 4.4 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2B02 _refine.ls_number_reflns_obs 20229 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 48.06 _refine.ls_d_res_high 1.50 _refine.ls_percent_reflns_obs 99.5 _refine.ls_R_factor_obs 0.188 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.187 _refine.ls_R_factor_R_free 0.208 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 1093 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.963 _refine.correlation_coeff_Fo_to_Fc_free 0.952 _refine.B_iso_mean 21.71 _refine.aniso_B[1][1] -0.28000 _refine.aniso_B[2][2] -0.55000 _refine.aniso_B[3][3] 0.83000 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.076 _refine.pdbx_overall_ESU_R_Free 0.075 _refine.overall_SU_ML 0.043 _refine.overall_SU_B 2.327 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 921 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 111 _refine_hist.number_atoms_total 1032 _refine_hist.d_res_high 1.50 _refine_hist.d_res_low 48.06 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.009 0.022 ? 1029 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.187 1.923 ? 1406 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.561 5.000 ? 129 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 40.109 24.259 ? 54 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 11.978 15.000 ? 182 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 24.580 15.000 ? 7 'X-RAY DIFFRACTION' ? r_chiral_restr 0.086 0.200 ? 152 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.020 ? 812 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.211 0.200 ? 464 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.300 0.200 ? 737 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.145 0.200 ? 100 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.178 0.200 ? 55 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.137 0.200 ? 16 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.921 1.500 ? 634 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.216 2.000 ? 1018 'X-RAY DIFFRACTION' ? r_scbond_it 2.062 3.000 ? 449 'X-RAY DIFFRACTION' ? r_scangle_it 3.073 4.500 ? 388 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.50 _refine_ls_shell.d_res_low 1.54 _refine_ls_shell.number_reflns_R_work 1452 _refine_ls_shell.R_factor_R_work 0.237 _refine_ls_shell.percent_reflns_obs 99.03 _refine_ls_shell.R_factor_R_free 0.272 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 83 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _struct.entry_id 2B02 _struct.title 'Crystal Structure of ARNT PAS-B Domain' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2B02 _struct_keywords.pdbx_keywords TRANSCRIPTION _struct_keywords.text 'PAS DOMAIN, ARNT, HIF, AHR, TRANSCRIPTION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ARG A 28 ? GLY A 34 ? ARG A 379 GLY A 385 1 ? 7 HELX_P HELX_P2 2 GLN A 36 ? LEU A 40 ? GLN A 387 LEU A 391 5 ? 5 HELX_P HELX_P3 3 ASN A 44 ? CYS A 49 ? ASN A 395 CYS A 400 5 ? 6 HELX_P HELX_P4 4 HIS A 50 ? GLU A 52 ? HIS A 401 GLU A 403 5 ? 3 HELX_P HELX_P5 5 ASP A 53 ? LEU A 67 ? ASP A 404 LEU A 418 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A MSE 3 C ? ? ? 1_555 A SER 4 N ? ? A MSE 354 A SER 355 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale2 covale both ? A VAL 74 C ? ? ? 1_555 A MSE 75 N B ? A VAL 425 A MSE 426 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale3 covale both ? A VAL 74 C ? ? ? 1_555 A MSE 75 N A ? A VAL 425 A MSE 426 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale4 covale both ? A MSE 75 C B ? ? 1_555 A PHE 76 N ? ? A MSE 426 A PHE 427 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale5 covale both ? A MSE 75 C A ? ? 1_555 A PHE 76 N ? ? A MSE 426 A PHE 427 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale6 covale both ? A TRP 87 C ? ? ? 1_555 A MSE 88 N B ? A TRP 438 A MSE 439 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale7 covale both ? A TRP 87 C ? ? ? 1_555 A MSE 88 N A ? A TRP 438 A MSE 439 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale8 covale both ? A MSE 88 C B ? ? 1_555 A ARG 89 N ? ? A MSE 439 A ARG 440 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale9 covale both ? A MSE 88 C A ? ? 1_555 A ARG 89 N ? ? A MSE 439 A ARG 440 1_555 ? ? ? ? ? ? ? 1.323 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 22 ? VAL A 25 ? PHE A 373 VAL A 376 A 2 GLU A 11 ? HIS A 16 ? GLU A 362 HIS A 367 A 3 ILE A 103 ? ASN A 112 ? ILE A 454 ASN A 463 A 4 TRP A 85 ? GLN A 96 ? TRP A 436 GLN A 447 A 5 LEU A 72 ? ARG A 79 ? LEU A 423 ARG A 430 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O THR A 23 ? O THR A 374 N ARG A 15 ? N ARG A 366 A 2 3 N SER A 14 ? N SER A 365 O CYS A 108 ? O CYS A 459 A 3 4 O GLU A 104 ? O GLU A 455 N PHE A 95 ? N PHE A 446 A 4 5 O MSE A 88 ? O MSE A 439 N PHE A 76 ? N PHE A 427 # _database_PDB_matrix.entry_id 2B02 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2B02 _atom_sites.fract_transf_matrix[1][1] 0.018076 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016231 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013036 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 352 ? ? ? A . n A 1 2 HIS 2 353 ? ? ? A . n A 1 3 MSE 3 354 354 MSE MSE A . n A 1 4 SER 4 355 355 SER SER A . n A 1 5 ASN 5 356 356 ASN ASN A . n A 1 6 VAL 6 357 357 VAL VAL A . n A 1 7 SER 7 358 358 SER SER A . n A 1 8 GLN 8 359 359 GLN GLN A . n A 1 9 PRO 9 360 360 PRO PRO A . n A 1 10 THR 10 361 361 THR THR A . n A 1 11 GLU 11 362 362 GLU GLU A . n A 1 12 PHE 12 363 363 PHE PHE A . n A 1 13 ILE 13 364 364 ILE ILE A . n A 1 14 SER 14 365 365 SER SER A . n A 1 15 ARG 15 366 366 ARG ARG A . n A 1 16 HIS 16 367 367 HIS HIS A . n A 1 17 ASN 17 368 368 ASN ASN A . n A 1 18 ILE 18 369 369 ILE ILE A . n A 1 19 GLU 19 370 370 GLU GLU A . n A 1 20 GLY 20 371 371 GLY GLY A . n A 1 21 ILE 21 372 372 ILE ILE A . n A 1 22 PHE 22 373 373 PHE PHE A . n A 1 23 THR 23 374 374 THR THR A . n A 1 24 PHE 24 375 375 PHE PHE A . n A 1 25 VAL 25 376 376 VAL VAL A . n A 1 26 ASP 26 377 377 ASP ASP A . n A 1 27 HIS 27 378 378 HIS HIS A . n A 1 28 ARG 28 379 379 ARG ARG A . n A 1 29 CYS 29 380 380 CYS CYS A . n A 1 30 VAL 30 381 381 VAL VAL A . n A 1 31 ALA 31 382 382 ALA ALA A . n A 1 32 THR 32 383 383 THR THR A . n A 1 33 VAL 33 384 384 VAL VAL A . n A 1 34 GLY 34 385 385 GLY GLY A . n A 1 35 TYR 35 386 386 TYR TYR A . n A 1 36 GLN 36 387 387 GLN GLN A . n A 1 37 PRO 37 388 388 PRO PRO A . n A 1 38 GLN 38 389 389 GLN GLN A . n A 1 39 GLU 39 390 390 GLU GLU A . n A 1 40 LEU 40 391 391 LEU LEU A . n A 1 41 LEU 41 392 392 LEU LEU A . n A 1 42 GLY 42 393 393 GLY GLY A . n A 1 43 LYS 43 394 394 LYS LYS A . n A 1 44 ASN 44 395 395 ASN ASN A . n A 1 45 ILE 45 396 396 ILE ILE A . n A 1 46 VAL 46 397 397 VAL VAL A . n A 1 47 GLU 47 398 398 GLU GLU A . n A 1 48 PHE 48 399 399 PHE PHE A . n A 1 49 CYS 49 400 400 CYS CYS A . n A 1 50 HIS 50 401 401 HIS HIS A . n A 1 51 PRO 51 402 402 PRO PRO A . n A 1 52 GLU 52 403 403 GLU GLU A . n A 1 53 ASP 53 404 404 ASP ASP A . n A 1 54 GLN 54 405 405 GLN GLN A . n A 1 55 GLN 55 406 406 GLN GLN A . n A 1 56 LEU 56 407 407 LEU LEU A . n A 1 57 LEU 57 408 408 LEU LEU A . n A 1 58 ARG 58 409 409 ARG ARG A . n A 1 59 ASP 59 410 410 ASP ASP A . n A 1 60 SER 60 411 411 SER SER A . n A 1 61 PHE 61 412 412 PHE PHE A . n A 1 62 GLN 62 413 413 GLN GLN A . n A 1 63 GLN 63 414 414 GLN GLN A . n A 1 64 VAL 64 415 415 VAL VAL A . n A 1 65 VAL 65 416 416 VAL VAL A . n A 1 66 LYS 66 417 417 LYS LYS A . n A 1 67 LEU 67 418 418 LEU LEU A . n A 1 68 LYS 68 419 419 LYS LYS A . n A 1 69 GLY 69 420 420 GLY GLY A . n A 1 70 GLN 70 421 421 GLN GLN A . n A 1 71 VAL 71 422 422 VAL VAL A . n A 1 72 LEU 72 423 423 LEU LEU A . n A 1 73 SER 73 424 424 SER SER A . n A 1 74 VAL 74 425 425 VAL VAL A . n A 1 75 MSE 75 426 426 MSE MSE A . n A 1 76 PHE 76 427 427 PHE PHE A . n A 1 77 ARG 77 428 428 ARG ARG A . n A 1 78 PHE 78 429 429 PHE PHE A . n A 1 79 ARG 79 430 430 ARG ARG A . n A 1 80 SER 80 431 431 SER SER A . n A 1 81 LYS 81 432 432 LYS LYS A . n A 1 82 ASN 82 433 433 ASN ASN A . n A 1 83 GLN 83 434 434 GLN GLN A . n A 1 84 GLU 84 435 435 GLU GLU A . n A 1 85 TRP 85 436 436 TRP TRP A . n A 1 86 LEU 86 437 437 LEU LEU A . n A 1 87 TRP 87 438 438 TRP TRP A . n A 1 88 MSE 88 439 439 MSE MSE A . n A 1 89 ARG 89 440 440 ARG ARG A . n A 1 90 THR 90 441 441 THR THR A . n A 1 91 SER 91 442 442 SER SER A . n A 1 92 SER 92 443 443 SER SER A . n A 1 93 PHE 93 444 444 PHE PHE A . n A 1 94 THR 94 445 445 THR THR A . n A 1 95 PHE 95 446 446 PHE PHE A . n A 1 96 GLN 96 447 447 GLN GLN A . n A 1 97 ASN 97 448 448 ASN ASN A . n A 1 98 PRO 98 449 449 PRO PRO A . n A 1 99 TYR 99 450 450 TYR TYR A . n A 1 100 SER 100 451 451 SER SER A . n A 1 101 ASP 101 452 452 ASP ASP A . n A 1 102 GLU 102 453 453 GLU GLU A . n A 1 103 ILE 103 454 454 ILE ILE A . n A 1 104 GLU 104 455 455 GLU GLU A . n A 1 105 TYR 105 456 456 TYR TYR A . n A 1 106 ILE 106 457 457 ILE ILE A . n A 1 107 ILE 107 458 458 ILE ILE A . n A 1 108 CYS 108 459 459 CYS CYS A . n A 1 109 THR 109 460 460 THR THR A . n A 1 110 ASN 110 461 461 ASN ASN A . n A 1 111 THR 111 462 462 THR THR A . n A 1 112 ASN 112 463 463 ASN ASN A . n A 1 113 VAL 113 464 464 VAL VAL A . n A 1 114 LYS 114 465 ? ? ? A . n A 1 115 ASN 115 466 ? ? ? A . n A 1 116 SER 116 467 ? ? ? A . n A 1 117 SER 117 468 ? ? ? A . n A 1 118 GLN 118 469 ? ? ? A . n A 1 119 GLU 119 470 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 1 1 HOH HOH A . B 2 HOH 2 2 2 HOH HOH A . B 2 HOH 3 3 3 HOH HOH A . B 2 HOH 4 4 4 HOH HOH A . B 2 HOH 5 5 5 HOH HOH A . B 2 HOH 6 6 6 HOH HOH A . B 2 HOH 7 7 7 HOH HOH A . B 2 HOH 8 8 8 HOH HOH A . B 2 HOH 9 9 9 HOH HOH A . B 2 HOH 10 10 10 HOH HOH A . B 2 HOH 11 11 11 HOH HOH A . B 2 HOH 12 12 12 HOH HOH A . B 2 HOH 13 13 13 HOH HOH A . B 2 HOH 14 14 14 HOH HOH A . B 2 HOH 15 15 15 HOH HOH A . B 2 HOH 16 16 16 HOH HOH A . B 2 HOH 17 17 17 HOH HOH A . B 2 HOH 18 18 18 HOH HOH A . B 2 HOH 19 19 19 HOH HOH A . B 2 HOH 20 20 20 HOH HOH A . B 2 HOH 21 21 21 HOH HOH A . B 2 HOH 22 22 22 HOH HOH A . B 2 HOH 23 23 23 HOH HOH A . B 2 HOH 24 24 24 HOH HOH A . B 2 HOH 25 25 25 HOH HOH A . B 2 HOH 26 26 26 HOH HOH A . B 2 HOH 27 27 27 HOH HOH A . B 2 HOH 28 28 28 HOH HOH A . B 2 HOH 29 29 29 HOH HOH A . B 2 HOH 30 30 30 HOH HOH A . B 2 HOH 31 31 31 HOH HOH A . B 2 HOH 32 32 32 HOH HOH A . B 2 HOH 33 33 33 HOH HOH A . B 2 HOH 34 34 34 HOH HOH A . B 2 HOH 35 35 35 HOH HOH A . B 2 HOH 36 36 36 HOH HOH A . B 2 HOH 37 37 37 HOH HOH A . B 2 HOH 38 38 38 HOH HOH A . B 2 HOH 39 39 39 HOH HOH A . B 2 HOH 40 40 40 HOH HOH A . B 2 HOH 41 41 41 HOH HOH A . B 2 HOH 42 42 42 HOH HOH A . B 2 HOH 43 43 43 HOH HOH A . B 2 HOH 44 44 44 HOH HOH A . B 2 HOH 45 45 45 HOH HOH A . B 2 HOH 46 46 46 HOH HOH A . B 2 HOH 47 47 47 HOH HOH A . B 2 HOH 48 48 48 HOH HOH A . B 2 HOH 49 49 49 HOH HOH A . B 2 HOH 50 50 50 HOH HOH A . B 2 HOH 51 51 51 HOH HOH A . B 2 HOH 52 52 52 HOH HOH A . B 2 HOH 53 53 53 HOH HOH A . B 2 HOH 54 54 54 HOH HOH A . B 2 HOH 55 55 55 HOH HOH A . B 2 HOH 56 56 56 HOH HOH A . B 2 HOH 57 57 57 HOH HOH A . B 2 HOH 58 58 58 HOH HOH A . B 2 HOH 59 59 59 HOH HOH A . B 2 HOH 60 60 60 HOH HOH A . B 2 HOH 61 61 61 HOH HOH A . B 2 HOH 62 62 62 HOH HOH A . B 2 HOH 63 63 63 HOH HOH A . B 2 HOH 64 64 64 HOH HOH A . B 2 HOH 65 65 65 HOH HOH A . B 2 HOH 66 66 66 HOH HOH A . B 2 HOH 67 67 67 HOH HOH A . B 2 HOH 68 68 68 HOH HOH A . B 2 HOH 69 69 69 HOH HOH A . B 2 HOH 70 70 70 HOH HOH A . B 2 HOH 71 71 71 HOH HOH A . B 2 HOH 72 72 72 HOH HOH A . B 2 HOH 73 73 73 HOH HOH A . B 2 HOH 74 74 74 HOH HOH A . B 2 HOH 75 75 75 HOH HOH A . B 2 HOH 76 76 76 HOH HOH A . B 2 HOH 77 77 77 HOH HOH A . B 2 HOH 78 78 78 HOH HOH A . B 2 HOH 79 79 79 HOH HOH A . B 2 HOH 80 80 80 HOH HOH A . B 2 HOH 81 81 81 HOH HOH A . B 2 HOH 82 82 82 HOH HOH A . B 2 HOH 83 83 83 HOH HOH A . B 2 HOH 84 84 84 HOH HOH A . B 2 HOH 85 85 85 HOH HOH A . B 2 HOH 86 86 86 HOH HOH A . B 2 HOH 87 87 87 HOH HOH A . B 2 HOH 88 88 88 HOH HOH A . B 2 HOH 89 89 89 HOH HOH A . B 2 HOH 90 90 90 HOH HOH A . B 2 HOH 91 91 91 HOH HOH A . B 2 HOH 92 92 92 HOH HOH A . B 2 HOH 93 93 93 HOH HOH A . B 2 HOH 94 94 94 HOH HOH A . B 2 HOH 95 95 95 HOH HOH A . B 2 HOH 96 96 96 HOH HOH A . B 2 HOH 97 97 97 HOH HOH A . B 2 HOH 98 98 98 HOH HOH A . B 2 HOH 99 99 99 HOH HOH A . B 2 HOH 100 100 100 HOH HOH A . B 2 HOH 101 101 101 HOH HOH A . B 2 HOH 102 102 102 HOH HOH A . B 2 HOH 103 103 103 HOH HOH A . B 2 HOH 104 104 104 HOH HOH A . B 2 HOH 105 105 105 HOH HOH A . B 2 HOH 106 106 106 HOH HOH A . B 2 HOH 107 107 107 HOH HOH A . B 2 HOH 108 108 108 HOH HOH A . B 2 HOH 109 109 109 HOH HOH A . B 2 HOH 110 110 110 HOH HOH A . B 2 HOH 111 111 111 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 3 A MSE 354 ? MET SELENOMETHIONINE 2 A MSE 75 A MSE 426 ? MET SELENOMETHIONINE 3 A MSE 88 A MSE 439 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 43 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id B _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-10-24 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2021-10-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' struct_conn 3 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 4 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 20.5425 _pdbx_refine_tls.origin_y 38.2812 _pdbx_refine_tls.origin_z 22.8709 _pdbx_refine_tls.T[1][1] -0.0261 _pdbx_refine_tls.T[2][2] -0.0182 _pdbx_refine_tls.T[3][3] -0.0313 _pdbx_refine_tls.T[1][2] 0.0064 _pdbx_refine_tls.T[1][3] 0.0060 _pdbx_refine_tls.T[2][3] 0.0162 _pdbx_refine_tls.L[1][1] 0.6535 _pdbx_refine_tls.L[2][2] 1.6424 _pdbx_refine_tls.L[3][3] 0.6748 _pdbx_refine_tls.L[1][2] -0.0597 _pdbx_refine_tls.L[1][3] 0.0348 _pdbx_refine_tls.L[2][3] -0.1742 _pdbx_refine_tls.S[1][1] 0.0504 _pdbx_refine_tls.S[1][2] 0.0328 _pdbx_refine_tls.S[1][3] 0.0857 _pdbx_refine_tls.S[2][1] 0.0128 _pdbx_refine_tls.S[2][2] -0.0234 _pdbx_refine_tls.S[2][3] 0.0708 _pdbx_refine_tls.S[3][1] 0.0085 _pdbx_refine_tls.S[3][2] -0.0447 _pdbx_refine_tls.S[3][3] -0.0270 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 354 _pdbx_refine_tls_group.beg_label_asym_id A _pdbx_refine_tls_group.beg_label_seq_id 3 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 464 _pdbx_refine_tls_group.end_label_asym_id A _pdbx_refine_tls_group.end_label_seq_id 113 _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.selection_details ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0005 ? 1 HKL-2000 'data reduction' . ? 2 HKL-2000 'data scaling' . ? 3 SOLVE phasing . ? 4 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OE2 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 GLU _pdbx_validate_close_contact.auth_seq_id_1 403 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 B _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 37 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.19 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 352 ? A GLY 1 2 1 Y 1 A HIS 353 ? A HIS 2 3 1 Y 1 A LYS 465 ? A LYS 114 4 1 Y 1 A ASN 466 ? A ASN 115 5 1 Y 1 A SER 467 ? A SER 116 6 1 Y 1 A SER 468 ? A SER 117 7 1 Y 1 A GLN 469 ? A GLN 118 8 1 Y 1 A GLU 470 ? A GLU 119 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #