HEADER SIGNALING PROTEIN 23-SEP-05 2B4A TITLE CRYSTAL STRUCTURE OF A RESPONSE REGULATOR RECEIVER DOMAIN PROTEIN TITLE 2 (BH3024) FROM BACILLUS HALODURANS C-125 AT 2.42 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: BH3024; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS HALODURANS; SOURCE 3 ORGANISM_TAXID: 272558; SOURCE 4 STRAIN: C-125; SOURCE 5 GENE: 10175646; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: HK100 KEYWDS FLAVODOXIN-LIKE FOLD, STRUCTURAL GENOMICS, JOINT CENTER FOR KEYWDS 2 STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI-2, KEYWDS 3 SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 6 20-SEP-23 2B4A 1 REMARK REVDAT 5 25-JAN-23 2B4A 1 REMARK SEQADV REVDAT 4 13-JUL-11 2B4A 1 VERSN REVDAT 3 23-MAR-11 2B4A 1 HEADER TITLE KEYWDS REVDAT 2 24-FEB-09 2B4A 1 VERSN REVDAT 1 11-OCT-05 2B4A 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF BH3024 PROTEIN (10175646) FROM BACILLUS JRNL TITL 2 HALODURANS AT 2.42 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.42 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0013 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.42 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.94 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 5309 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.600 REMARK 3 FREE R VALUE TEST SET COUNT : 257 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.42 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.48 REMARK 3 REFLECTION IN BIN (WORKING SET) : 326 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 89.15 REMARK 3 BIN R VALUE (WORKING SET) : 0.2890 REMARK 3 BIN FREE R VALUE SET COUNT : 19 REMARK 3 BIN FREE R VALUE : 0.4940 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 889 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 8 REMARK 3 SOLVENT ATOMS : 25 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.12 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.68000 REMARK 3 B22 (A**2) : 0.68000 REMARK 3 B33 (A**2) : -1.35000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.339 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.250 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.179 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 16.654 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.935 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 912 ; 0.017 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 589 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1237 ; 1.732 ; 1.966 REMARK 3 BOND ANGLES OTHERS (DEGREES): 1455 ; 0.995 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 114 ; 8.017 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 36 ;38.418 ;25.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 150 ;15.545 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 2 ;27.805 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 152 ; 0.104 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 985 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 165 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 158 ; 0.211 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 558 ; 0.195 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 455 ; 0.177 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 455 ; 0.094 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 28 ; 0.176 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 12 ; 0.116 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 24 ; 0.247 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 2 ; 0.145 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 602 ; 2.372 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 228 ; 0.443 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 940 ; 3.815 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 347 ; 6.309 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 297 ; 8.326 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 119 REMARK 3 ORIGIN FOR THE GROUP (A): 28.6778 16.2032 73.4553 REMARK 3 T TENSOR REMARK 3 T11: -0.0405 T22: 0.1811 REMARK 3 T33: 0.0432 T12: 0.0020 REMARK 3 T13: -0.0099 T23: -0.1066 REMARK 3 L TENSOR REMARK 3 L11: 6.7271 L22: 2.1846 REMARK 3 L33: 7.2576 L12: -1.3427 REMARK 3 L13: -3.4635 L23: 2.6625 REMARK 3 S TENSOR REMARK 3 S11: 0.2299 S12: 0.2097 S13: 0.0733 REMARK 3 S21: 0.0225 S22: 0.0664 S23: -0.0196 REMARK 3 S31: -0.2541 S32: 0.0259 S33: -0.2963 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 3 2. HIS 87 AND GLU 88 ARE NOT VISIBLE IN THE ELECTRON DENSITY MAPS. REMARK 4 REMARK 4 2B4A COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-SEP-05. REMARK 100 THE DEPOSITION ID IS D_1000034656. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUN-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL SI(333) BENT REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : FLAT MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA, CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 5994 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.360 REMARK 200 RESOLUTION RANGE LOW (A) : 28.940 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : 10.90 REMARK 200 R MERGE (I) : 0.08600 REMARK 200 R SYM (I) : 0.08600 REMARK 200 FOR THE DATA SET : 6.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.36 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.42 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : 0.71000 REMARK 200 R SYM FOR SHELL (I) : 0.71000 REMARK 200 FOR SHELL : 1.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MR REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1KGS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.29 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.54 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M NACL, 10.0% PEG-8000, 0.1M NA, K REMARK 280 -PHOSPHATE, PH 6.2, VAPOR DIFFUSION,SITTING DROP,NANODROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 86.37050 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 19.50150 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 19.50150 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 43.18525 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 19.50150 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 19.50150 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 129.55575 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 19.50150 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 19.50150 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 43.18525 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 19.50150 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 19.50150 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 129.55575 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 86.37050 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -11 REMARK 465 GLY A -10 REMARK 465 SER A -9 REMARK 465 ASP A -8 REMARK 465 LYS A -7 REMARK 465 ILE A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 HIS A 87 REMARK 465 GLU A 88 REMARK 465 MET A 120 REMARK 465 GLY A 121 REMARK 465 VAL A 122 REMARK 465 THR A 123 REMARK 465 MET A 124 REMARK 465 ASN A 125 REMARK 465 VAL A 126 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 2 CG CD OE1 NE2 REMARK 470 ARG A 5 CZ NH1 NH2 REMARK 470 GLU A 29 CD OE1 OE2 REMARK 470 LYS A 75 CE NZ REMARK 470 ARG A 86 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 89 CG CD1 CD2 REMARK 470 GLU A 91 CG CD OE1 OE2 REMARK 470 PRO A 103 CG CD REMARK 470 ASP A 114 OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 72 CG GLU A 72 CD 0.091 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 43 -48.11 -29.00 REMARK 500 GLN A 57 48.39 -143.20 REMARK 500 PRO A 118 153.85 -39.29 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER A 93 GLU A 94 144.67 REMARK 500 LYS A 117 PRO A 118 148.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 127 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 128 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 358875 RELATED DB: TARGETDB DBREF 2B4A A 1 126 UNP Q9K8I2 Q9K8I2_BACHD 1 126 SEQADV 2B4A MET A -11 UNP Q9K8I2 INITIATING METHIONINE SEQADV 2B4A GLY A -10 UNP Q9K8I2 EXPRESSION TAG SEQADV 2B4A SER A -9 UNP Q9K8I2 EXPRESSION TAG SEQADV 2B4A ASP A -8 UNP Q9K8I2 EXPRESSION TAG SEQADV 2B4A LYS A -7 UNP Q9K8I2 EXPRESSION TAG SEQADV 2B4A ILE A -6 UNP Q9K8I2 EXPRESSION TAG SEQADV 2B4A HIS A -5 UNP Q9K8I2 EXPRESSION TAG SEQADV 2B4A HIS A -4 UNP Q9K8I2 EXPRESSION TAG SEQADV 2B4A HIS A -3 UNP Q9K8I2 EXPRESSION TAG SEQADV 2B4A HIS A -2 UNP Q9K8I2 EXPRESSION TAG SEQADV 2B4A HIS A -1 UNP Q9K8I2 EXPRESSION TAG SEQADV 2B4A HIS A 0 UNP Q9K8I2 EXPRESSION TAG SEQRES 1 A 138 MET GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS MET SEQRES 2 A 138 GLN PRO PHE ARG VAL THR LEU VAL GLU ASP GLU PRO SER SEQRES 3 A 138 HIS ALA THR LEU ILE GLN TYR HIS LEU ASN GLN LEU GLY SEQRES 4 A 138 ALA GLU VAL THR VAL HIS PRO SER GLY SER ALA PHE PHE SEQRES 5 A 138 GLN HIS ARG SER GLN LEU SER THR CYS ASP LEU LEU ILE SEQRES 6 A 138 VAL SER ASP GLN LEU VAL ASP LEU SER ILE PHE SER LEU SEQRES 7 A 138 LEU ASP ILE VAL LYS GLU GLN THR LYS GLN PRO SER VAL SEQRES 8 A 138 LEU ILE LEU THR THR GLY ARG HIS GLU LEU ILE GLU SER SEQRES 9 A 138 SER GLU HIS ASN LEU SER TYR LEU GLN LYS PRO PHE ALA SEQRES 10 A 138 ILE SER GLU LEU ARG ALA ALA ILE ASP TYR HIS LYS PRO SEQRES 11 A 138 SER MET GLY VAL THR MET ASN VAL HET EDO A 127 4 HET EDO A 128 4 HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 EDO 2(C2 H6 O2) FORMUL 4 HOH *25(H2 O) HELIX 1 1 GLU A 12 LEU A 26 1 15 HELIX 2 2 SER A 35 HIS A 42 1 8 HELIX 3 3 ARG A 43 THR A 48 5 6 HELIX 4 4 SER A 62 LYS A 71 1 10 HELIX 5 5 ALA A 105 HIS A 116 1 12 SHEET 1 A 5 GLU A 29 HIS A 33 0 SHEET 2 A 5 ARG A 5 VAL A 9 1 N LEU A 8 O THR A 31 SHEET 3 A 5 LEU A 51 SER A 55 1 O ILE A 53 N VAL A 9 SHEET 4 A 5 SER A 78 THR A 83 1 O LEU A 80 N LEU A 52 SHEET 5 A 5 LEU A 97 GLN A 101 1 O LEU A 100 N ILE A 81 CISPEP 1 LYS A 102 PRO A 103 0 -10.37 CISPEP 2 PRO A 118 SER A 119 0 9.72 SITE 1 AC1 4 HIS A 15 PRO A 103 PHE A 104 SER A 119 SITE 1 AC2 7 LEU A 67 VAL A 70 LYS A 71 GLN A 76 SITE 2 AC2 7 SER A 92 GLU A 94 ASN A 96 CRYST1 39.003 39.003 172.741 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025640 0.000000 0.000000 0.00000 SCALE2 0.000000 0.025640 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005790 0.00000