data_2C86 # _entry.id 2C86 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.382 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2C86 pdb_00002c86 10.2210/pdb2c86/pdb PDBE EBI-26635 ? ? WWPDB D_1290026635 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 2BTL unspecified 'CRYSTAL STRUCTURE OF THE N-TERMINAL DOMAIN OF IBV CORONAVIRUS NUCLEOCAPSID' PDB 2BXX unspecified 'CRYSTAL STRUCTURE OF THE N-TERMINAL DOMAIN OF IBV CORONAVIRUS NUCLEOCAPSID. NATIVE CRYSTAL FORM' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2C86 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2005-12-02 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Jayaram, H.' 1 'Fan, H.' 2 'Bowman, B.R.' 3 'Ooi, A.' 4 'Jayaram, J.' 5 'Collinson, E.W.' 6 'Lescar, J.' 7 'Prasad, B.V.V.' 8 # _citation.id primary _citation.title 'X-Ray Structures of the N- and C-Terminal Domains of a Coronavirus Nucleocapsid Protein: Implications for Nucleocapsid Formation.' _citation.journal_abbrev J.Virol. _citation.journal_volume 80 _citation.page_first 6612 _citation.page_last ? _citation.year 2006 _citation.journal_id_ASTM JOVIAM _citation.country US _citation.journal_id_ISSN 0022-538X _citation.journal_id_CSD 0825 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16775348 _citation.pdbx_database_id_DOI 10.1128/JVI.00157-06 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Jayaram, H.' 1 ? primary 'Fan, H.' 2 ? primary 'Bowman, B.R.' 3 ? primary 'Ooi, A.' 4 ? primary 'Jayaram, J.' 5 ? primary 'Collisson, E.W.' 6 ? primary 'Lescar, J.' 7 ? primary 'Prasad, B.V.V.' 8 ? # _cell.entry_id 2C86 _cell.length_a 71.399 _cell.length_b 96.662 _cell.length_c 66.593 _cell.angle_alpha 90.00 _cell.angle_beta 98.53 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2C86 _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'NUCLEOCAPSID PROTEIN' 15014.549 2 ? YES 'N-TERMINAL DOMAIN, RESIDUES 29-160' ? 2 water nat water 18.015 34 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'IBV NUCLEOCAPSID, N STRUCTURAL PROTEIN, NC' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;HMSSGNASWFQAIKAKKLNTPPPKFEGSGVPDNENIKPSQQHGYWRRQARFKPGKGGRCPVPDAWYFYYTGTGPAADLNW GDTQDGIVWVAAKGADTKSRSNQGTRDPDKFDQYPLRFSDGGPDGNFRWDFIPL ; _entity_poly.pdbx_seq_one_letter_code_can ;HMSSGNASWFQAIKAKKLNTPPPKFEGSGVPDNENIKPSQQHGYWRRQARFKPGKGGRCPVPDAWYFYYTGTGPAADLNW GDTQDGIVWVAAKGADTKSRSNQGTRDPDKFDQYPLRFSDGGPDGNFRWDFIPL ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 HIS n 1 2 MET n 1 3 SER n 1 4 SER n 1 5 GLY n 1 6 ASN n 1 7 ALA n 1 8 SER n 1 9 TRP n 1 10 PHE n 1 11 GLN n 1 12 ALA n 1 13 ILE n 1 14 LYS n 1 15 ALA n 1 16 LYS n 1 17 LYS n 1 18 LEU n 1 19 ASN n 1 20 THR n 1 21 PRO n 1 22 PRO n 1 23 PRO n 1 24 LYS n 1 25 PHE n 1 26 GLU n 1 27 GLY n 1 28 SER n 1 29 GLY n 1 30 VAL n 1 31 PRO n 1 32 ASP n 1 33 ASN n 1 34 GLU n 1 35 ASN n 1 36 ILE n 1 37 LYS n 1 38 PRO n 1 39 SER n 1 40 GLN n 1 41 GLN n 1 42 HIS n 1 43 GLY n 1 44 TYR n 1 45 TRP n 1 46 ARG n 1 47 ARG n 1 48 GLN n 1 49 ALA n 1 50 ARG n 1 51 PHE n 1 52 LYS n 1 53 PRO n 1 54 GLY n 1 55 LYS n 1 56 GLY n 1 57 GLY n 1 58 ARG n 1 59 CYS n 1 60 PRO n 1 61 VAL n 1 62 PRO n 1 63 ASP n 1 64 ALA n 1 65 TRP n 1 66 TYR n 1 67 PHE n 1 68 TYR n 1 69 TYR n 1 70 THR n 1 71 GLY n 1 72 THR n 1 73 GLY n 1 74 PRO n 1 75 ALA n 1 76 ALA n 1 77 ASP n 1 78 LEU n 1 79 ASN n 1 80 TRP n 1 81 GLY n 1 82 ASP n 1 83 THR n 1 84 GLN n 1 85 ASP n 1 86 GLY n 1 87 ILE n 1 88 VAL n 1 89 TRP n 1 90 VAL n 1 91 ALA n 1 92 ALA n 1 93 LYS n 1 94 GLY n 1 95 ALA n 1 96 ASP n 1 97 THR n 1 98 LYS n 1 99 SER n 1 100 ARG n 1 101 SER n 1 102 ASN n 1 103 GLN n 1 104 GLY n 1 105 THR n 1 106 ARG n 1 107 ASP n 1 108 PRO n 1 109 ASP n 1 110 LYS n 1 111 PHE n 1 112 ASP n 1 113 GLN n 1 114 TYR n 1 115 PRO n 1 116 LEU n 1 117 ARG n 1 118 PHE n 1 119 SER n 1 120 ASP n 1 121 GLY n 1 122 GLY n 1 123 PRO n 1 124 ASP n 1 125 GLY n 1 126 ASN n 1 127 PHE n 1 128 ARG n 1 129 TRP n 1 130 ASP n 1 131 PHE n 1 132 ILE n 1 133 PRO n 1 134 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'BEAUDETTE US' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'AVIAN INFECTIOUS BRONCHITIS VIRUS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 11120 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET16B _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 PDB 2C86 1 ? ? 2C86 ? 2 UNP NCAP_IBVBU 1 ? ? P69598 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2C86 A 1 ? 2 ? 2C86 27 ? 28 ? 27 28 2 2 2C86 A 3 ? 134 ? P69598 29 ? 160 ? 29 160 3 1 2C86 B 1 ? 2 ? 2C86 27 ? 28 ? 27 28 4 2 2C86 B 3 ? 134 ? P69598 29 ? 160 ? 29 160 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2C86 CYS A 59 ? UNP P69598 LYS 85 'engineered mutation' 85 1 3 2C86 CYS B 59 ? UNP P69598 LYS 85 'engineered mutation' 85 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2C86 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.5 _exptl_crystal.density_percent_sol 50 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.40 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '20% PEG 3350, 0.2M LITHIUM SULFATE, pH 7.40' # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date 2005-06-01 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type RIGAKU _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2C86 _reflns.observed_criterion_sigma_I 2.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 20.000 _reflns.d_resolution_high 3.000 _reflns.number_obs 8739 _reflns.number_all ? _reflns.percent_possible_obs 96.9 _reflns.pdbx_Rmerge_I_obs 0.11000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 16.3000 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.000 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 3.00 _reflns_shell.d_res_low 3.16 _reflns_shell.percent_possible_all 96.3 _reflns_shell.Rmerge_I_obs 0.50000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.100 _reflns_shell.pdbx_redundancy 5.00 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2C86 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 8264 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.00 _refine.ls_d_res_high 3.00 _refine.ls_percent_reflns_obs 96.6 _refine.ls_R_factor_obs 0.269 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.266 _refine.ls_R_factor_R_free 0.328 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.800 _refine.ls_number_reflns_R_free 413 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.881 _refine.correlation_coeff_Fo_to_Fc_free 0.826 _refine.B_iso_mean 57.42 _refine.aniso_B[1][1] 3.47000 _refine.aniso_B[2][2] -5.00000 _refine.aniso_B[3][3] 0.99000 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] -1.80000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.' _refine.pdbx_starting_model 'PDB ENTRY 1BTL' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free 0.518 _refine.overall_SU_ML 0.432 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 23.676 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2130 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 34 _refine_hist.number_atoms_total 2164 _refine_hist.d_res_high 3.00 _refine_hist.d_res_low 20.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.011 0.022 ? 2208 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.346 1.923 ? 3000 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 7.390 5.000 ? 266 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 34.574 23.509 ? 114 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 20.781 15.000 ? 320 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 19.559 15.000 ? 16 'X-RAY DIFFRACTION' ? r_chiral_restr 0.090 0.200 ? 272 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.003 0.020 ? 1816 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.244 0.200 ? 1062 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.317 0.200 ? 1438 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.209 0.200 ? 80 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.303 0.200 ? 32 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.252 0.200 ? 6 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.534 1.500 ? 1353 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 0.974 2.000 ? 2132 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 0.715 3.000 ? 1012 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 1.064 4.500 ? 868 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso _refine_ls_restr_ncs.pdbx_asym_id _refine_ls_restr_ncs.pdbx_rms _refine_ls_restr_ncs.pdbx_weight 1 A 1065 0.47 0.50 'medium positional' 1 1 'X-RAY DIFFRACTION' ? ? ? ? ? ? 1 A 1065 0.26 2.00 'medium thermal' 1 2 'X-RAY DIFFRACTION' ? ? ? ? ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 3.00 _refine_ls_shell.d_res_low 3.08 _refine_ls_shell.number_reflns_R_work 573 _refine_ls_shell.R_factor_R_work 0.3920 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.4470 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 31 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct_ncs_oper.id 1 _struct_ncs_oper.code given _struct_ncs_oper.details ? _struct_ncs_oper.matrix[1][1] 0.375910 _struct_ncs_oper.matrix[1][2] -0.926650 _struct_ncs_oper.matrix[1][3] 0.003050 _struct_ncs_oper.matrix[2][1] -0.926290 _struct_ncs_oper.matrix[2][2] -0.375850 _struct_ncs_oper.matrix[2][3] -0.026850 _struct_ncs_oper.matrix[3][1] 0.026030 _struct_ncs_oper.matrix[3][2] 0.007260 _struct_ncs_oper.matrix[3][3] -0.999630 _struct_ncs_oper.vector[1] 1.56722 _struct_ncs_oper.vector[2] -3.17674 _struct_ncs_oper.vector[3] 16.00610 # loop_ _struct_ncs_dom.id _struct_ncs_dom.details _struct_ncs_dom.pdbx_ens_id 1 A 1 2 B 1 # loop_ _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.selection_details _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.end_auth_comp_id 1 A 1 A 134 1 4 ? ? ? ? ? ? ? ? 1 ? ? ? 2 B 1 B 134 1 4 ? ? ? ? ? ? ? ? 1 ? ? ? # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? # _struct.entry_id 2C86 _struct.title 'x-ray structure of the N and C-terminal domain of coronavirus nucleocapsid protein.' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2C86 _struct_keywords.pdbx_keywords 'NUCLEOCAPSID PROTEIN' _struct_keywords.text 'NUCLEOCAPSID PROTEIN, PHOSPHORYLATION, RNA-BINDING, VIRAL NUCLEOPROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_biol.id 1 # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id LYS _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 37 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id GLN _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 40 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id LYS _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 63 _struct_conf.end_auth_comp_id GLN _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 66 _struct_conf.pdbx_PDB_helix_class 5 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLY 5 A . ? GLY 31 A ASN 6 A ? ASN 32 A 1 5.59 2 ASP 109 A . ? ASP 135 A LYS 110 A ? LYS 136 A 1 -6.42 3 ASP 109 B . ? ASP 135 B LYS 110 B ? LYS 136 B 1 -6.09 4 ASP 112 B . ? ASP 138 B GLN 113 B ? GLN 139 B 1 9.26 5 GLN 113 B . ? GLN 139 B TYR 114 B ? TYR 140 B 1 -7.43 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 5 ? AB ? 2 ? BA ? 5 ? BB ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? anti-parallel AA 4 5 ? anti-parallel AB 1 2 ? anti-parallel BA 1 2 ? anti-parallel BA 2 3 ? anti-parallel BA 3 4 ? anti-parallel BA 4 5 ? anti-parallel BB 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 ILE A 87 ? ALA A 91 ? ILE A 113 ALA A 117 AA 2 HIS A 42 ? ARG A 47 ? HIS A 68 ARG A 73 AA 3 ALA A 64 ? TYR A 69 ? ALA A 90 TYR A 95 AA 4 ILE A 13 ? ALA A 15 ? ILE A 39 ALA A 41 AA 5 PHE A 127 ? ARG A 128 ? PHE A 153 ARG A 154 AB 1 PHE A 25 ? GLU A 26 ? PHE A 51 GLU A 52 AB 2 GLY A 122 ? PRO A 123 ? GLY A 148 PRO A 149 BA 1 ILE B 87 ? ALA B 91 ? ILE B 113 ALA B 117 BA 2 HIS B 42 ? ARG B 47 ? HIS B 68 ARG B 73 BA 3 ALA B 64 ? TYR B 68 ? ALA B 90 TYR B 94 BA 4 ILE B 13 ? ALA B 15 ? ILE B 39 ALA B 41 BA 5 PHE B 127 ? ARG B 128 ? PHE B 153 ARG B 154 BB 1 ARG B 50 ? GLY B 54 ? ARG B 76 GLY B 80 BB 2 GLY B 57 ? VAL B 61 ? GLY B 83 VAL B 87 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N VAL A 90 ? N VAL A 116 O GLY A 43 ? O GLY A 69 AA 2 3 N ARG A 46 ? N ARG A 72 O TYR A 66 ? O TYR A 92 AA 3 4 N TRP A 65 ? N TRP A 91 O ILE A 13 ? O ILE A 39 AA 4 5 N LYS A 14 ? N LYS A 40 O ARG A 128 ? O ARG A 154 AB 1 2 N GLU A 26 ? N GLU A 52 O GLY A 122 ? O GLY A 148 BA 1 2 N VAL B 90 ? N VAL B 116 O GLY B 43 ? O GLY B 69 BA 2 3 N ARG B 46 ? N ARG B 72 O TYR B 66 ? O TYR B 92 BA 3 4 N TRP B 65 ? N TRP B 91 O ILE B 13 ? O ILE B 39 BA 4 5 N LYS B 14 ? N LYS B 40 O ARG B 128 ? O ARG B 154 BB 1 2 N GLY B 54 ? N GLY B 80 O GLY B 57 ? O GLY B 83 # _database_PDB_matrix.entry_id 2C86 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2C86 _atom_sites.fract_transf_matrix[1][1] 0.014006 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.002101 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010345 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015185 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 HIS 1 27 27 HIS HIS A . n A 1 2 MET 2 28 28 MET MET A . n A 1 3 SER 3 29 29 SER SER A . n A 1 4 SER 4 30 30 SER SER A . n A 1 5 GLY 5 31 31 GLY GLY A . n A 1 6 ASN 6 32 32 ASN ASN A . n A 1 7 ALA 7 33 33 ALA ALA A . n A 1 8 SER 8 34 34 SER SER A . n A 1 9 TRP 9 35 35 TRP TRP A . n A 1 10 PHE 10 36 36 PHE PHE A . n A 1 11 GLN 11 37 37 GLN GLN A . n A 1 12 ALA 12 38 38 ALA ALA A . n A 1 13 ILE 13 39 39 ILE ILE A . n A 1 14 LYS 14 40 40 LYS LYS A . n A 1 15 ALA 15 41 41 ALA ALA A . n A 1 16 LYS 16 42 42 LYS LYS A . n A 1 17 LYS 17 43 43 LYS LYS A . n A 1 18 LEU 18 44 44 LEU LEU A . n A 1 19 ASN 19 45 45 ASN ASN A . n A 1 20 THR 20 46 46 THR THR A . n A 1 21 PRO 21 47 47 PRO PRO A . n A 1 22 PRO 22 48 48 PRO PRO A . n A 1 23 PRO 23 49 49 PRO PRO A . n A 1 24 LYS 24 50 50 LYS LYS A . n A 1 25 PHE 25 51 51 PHE PHE A . n A 1 26 GLU 26 52 52 GLU GLU A . n A 1 27 GLY 27 53 53 GLY GLY A . n A 1 28 SER 28 54 54 SER SER A . n A 1 29 GLY 29 55 55 GLY GLY A . n A 1 30 VAL 30 56 56 VAL VAL A . n A 1 31 PRO 31 57 57 PRO PRO A . n A 1 32 ASP 32 58 58 ASP ASP A . n A 1 33 ASN 33 59 59 ASN ASN A . n A 1 34 GLU 34 60 60 GLU GLU A . n A 1 35 ASN 35 61 61 ASN ASN A . n A 1 36 ILE 36 62 62 ILE ILE A . n A 1 37 LYS 37 63 63 LYS LYS A . n A 1 38 PRO 38 64 64 PRO PRO A . n A 1 39 SER 39 65 65 SER SER A . n A 1 40 GLN 40 66 66 GLN GLN A . n A 1 41 GLN 41 67 67 GLN GLN A . n A 1 42 HIS 42 68 68 HIS HIS A . n A 1 43 GLY 43 69 69 GLY GLY A . n A 1 44 TYR 44 70 70 TYR TYR A . n A 1 45 TRP 45 71 71 TRP TRP A . n A 1 46 ARG 46 72 72 ARG ARG A . n A 1 47 ARG 47 73 73 ARG ARG A . n A 1 48 GLN 48 74 74 GLN GLN A . n A 1 49 ALA 49 75 75 ALA ALA A . n A 1 50 ARG 50 76 76 ARG ARG A . n A 1 51 PHE 51 77 77 PHE PHE A . n A 1 52 LYS 52 78 78 LYS LYS A . n A 1 53 PRO 53 79 79 PRO PRO A . n A 1 54 GLY 54 80 80 GLY GLY A . n A 1 55 LYS 55 81 81 LYS LYS A . n A 1 56 GLY 56 82 82 GLY GLY A . n A 1 57 GLY 57 83 83 GLY GLY A . n A 1 58 ARG 58 84 84 ARG ARG A . n A 1 59 CYS 59 85 85 CYS CYS A . n A 1 60 PRO 60 86 86 PRO PRO A . n A 1 61 VAL 61 87 87 VAL VAL A . n A 1 62 PRO 62 88 88 PRO PRO A . n A 1 63 ASP 63 89 89 ASP ASP A . n A 1 64 ALA 64 90 90 ALA ALA A . n A 1 65 TRP 65 91 91 TRP TRP A . n A 1 66 TYR 66 92 92 TYR TYR A . n A 1 67 PHE 67 93 93 PHE PHE A . n A 1 68 TYR 68 94 94 TYR TYR A . n A 1 69 TYR 69 95 95 TYR TYR A . n A 1 70 THR 70 96 96 THR THR A . n A 1 71 GLY 71 97 97 GLY GLY A . n A 1 72 THR 72 98 98 THR THR A . n A 1 73 GLY 73 99 99 GLY GLY A . n A 1 74 PRO 74 100 100 PRO PRO A . n A 1 75 ALA 75 101 101 ALA ALA A . n A 1 76 ALA 76 102 102 ALA ALA A . n A 1 77 ASP 77 103 103 ASP ASP A . n A 1 78 LEU 78 104 104 LEU LEU A . n A 1 79 ASN 79 105 105 ASN ASN A . n A 1 80 TRP 80 106 106 TRP TRP A . n A 1 81 GLY 81 107 107 GLY GLY A . n A 1 82 ASP 82 108 108 ASP ASP A . n A 1 83 THR 83 109 109 THR THR A . n A 1 84 GLN 84 110 110 GLN GLN A . n A 1 85 ASP 85 111 111 ASP ASP A . n A 1 86 GLY 86 112 112 GLY GLY A . n A 1 87 ILE 87 113 113 ILE ILE A . n A 1 88 VAL 88 114 114 VAL VAL A . n A 1 89 TRP 89 115 115 TRP TRP A . n A 1 90 VAL 90 116 116 VAL VAL A . n A 1 91 ALA 91 117 117 ALA ALA A . n A 1 92 ALA 92 118 118 ALA ALA A . n A 1 93 LYS 93 119 119 LYS LYS A . n A 1 94 GLY 94 120 120 GLY GLY A . n A 1 95 ALA 95 121 121 ALA ALA A . n A 1 96 ASP 96 122 122 ASP ASP A . n A 1 97 THR 97 123 123 THR THR A . n A 1 98 LYS 98 124 124 LYS LYS A . n A 1 99 SER 99 125 125 SER SER A . n A 1 100 ARG 100 126 126 ARG ARG A . n A 1 101 SER 101 127 127 SER SER A . n A 1 102 ASN 102 128 128 ASN ASN A . n A 1 103 GLN 103 129 129 GLN GLN A . n A 1 104 GLY 104 130 130 GLY GLY A . n A 1 105 THR 105 131 131 THR THR A . n A 1 106 ARG 106 132 132 ARG ARG A . n A 1 107 ASP 107 133 133 ASP ASP A . n A 1 108 PRO 108 134 134 PRO PRO A . n A 1 109 ASP 109 135 135 ASP ASP A . n A 1 110 LYS 110 136 136 LYS LYS A . n A 1 111 PHE 111 137 137 PHE PHE A . n A 1 112 ASP 112 138 138 ASP ASP A . n A 1 113 GLN 113 139 139 GLN GLN A . n A 1 114 TYR 114 140 140 TYR TYR A . n A 1 115 PRO 115 141 141 PRO PRO A . n A 1 116 LEU 116 142 142 LEU LEU A . n A 1 117 ARG 117 143 143 ARG ARG A . n A 1 118 PHE 118 144 144 PHE PHE A . n A 1 119 SER 119 145 145 SER SER A . n A 1 120 ASP 120 146 146 ASP ASP A . n A 1 121 GLY 121 147 147 GLY GLY A . n A 1 122 GLY 122 148 148 GLY GLY A . n A 1 123 PRO 123 149 149 PRO PRO A . n A 1 124 ASP 124 150 150 ASP ASP A . n A 1 125 GLY 125 151 151 GLY GLY A . n A 1 126 ASN 126 152 152 ASN ASN A . n A 1 127 PHE 127 153 153 PHE PHE A . n A 1 128 ARG 128 154 154 ARG ARG A . n A 1 129 TRP 129 155 155 TRP TRP A . n A 1 130 ASP 130 156 156 ASP ASP A . n A 1 131 PHE 131 157 157 PHE PHE A . n A 1 132 ILE 132 158 158 ILE ILE A . n A 1 133 PRO 133 159 159 PRO PRO A . n A 1 134 LEU 134 160 160 LEU LEU A . n B 1 1 HIS 1 27 27 HIS HIS B . n B 1 2 MET 2 28 28 MET MET B . n B 1 3 SER 3 29 29 SER SER B . n B 1 4 SER 4 30 30 SER SER B . n B 1 5 GLY 5 31 31 GLY GLY B . n B 1 6 ASN 6 32 32 ASN ASN B . n B 1 7 ALA 7 33 33 ALA ALA B . n B 1 8 SER 8 34 34 SER SER B . n B 1 9 TRP 9 35 35 TRP TRP B . n B 1 10 PHE 10 36 36 PHE PHE B . n B 1 11 GLN 11 37 37 GLN GLN B . n B 1 12 ALA 12 38 38 ALA ALA B . n B 1 13 ILE 13 39 39 ILE ILE B . n B 1 14 LYS 14 40 40 LYS LYS B . n B 1 15 ALA 15 41 41 ALA ALA B . n B 1 16 LYS 16 42 42 LYS LYS B . n B 1 17 LYS 17 43 43 LYS LYS B . n B 1 18 LEU 18 44 44 LEU LEU B . n B 1 19 ASN 19 45 45 ASN ASN B . n B 1 20 THR 20 46 46 THR THR B . n B 1 21 PRO 21 47 47 PRO PRO B . n B 1 22 PRO 22 48 48 PRO PRO B . n B 1 23 PRO 23 49 49 PRO PRO B . n B 1 24 LYS 24 50 50 LYS LYS B . n B 1 25 PHE 25 51 51 PHE PHE B . n B 1 26 GLU 26 52 52 GLU GLU B . n B 1 27 GLY 27 53 53 GLY GLY B . n B 1 28 SER 28 54 54 SER SER B . n B 1 29 GLY 29 55 55 GLY GLY B . n B 1 30 VAL 30 56 56 VAL VAL B . n B 1 31 PRO 31 57 57 PRO PRO B . n B 1 32 ASP 32 58 58 ASP ASP B . n B 1 33 ASN 33 59 59 ASN ASN B . n B 1 34 GLU 34 60 60 GLU GLU B . n B 1 35 ASN 35 61 61 ASN ASN B . n B 1 36 ILE 36 62 62 ILE ILE B . n B 1 37 LYS 37 63 63 LYS LYS B . n B 1 38 PRO 38 64 64 PRO PRO B . n B 1 39 SER 39 65 65 SER SER B . n B 1 40 GLN 40 66 66 GLN GLN B . n B 1 41 GLN 41 67 67 GLN GLN B . n B 1 42 HIS 42 68 68 HIS HIS B . n B 1 43 GLY 43 69 69 GLY GLY B . n B 1 44 TYR 44 70 70 TYR TYR B . n B 1 45 TRP 45 71 71 TRP TRP B . n B 1 46 ARG 46 72 72 ARG ARG B . n B 1 47 ARG 47 73 73 ARG ARG B . n B 1 48 GLN 48 74 74 GLN GLN B . n B 1 49 ALA 49 75 75 ALA ALA B . n B 1 50 ARG 50 76 76 ARG ARG B . n B 1 51 PHE 51 77 77 PHE PHE B . n B 1 52 LYS 52 78 78 LYS LYS B . n B 1 53 PRO 53 79 79 PRO PRO B . n B 1 54 GLY 54 80 80 GLY GLY B . n B 1 55 LYS 55 81 81 LYS LYS B . n B 1 56 GLY 56 82 82 GLY GLY B . n B 1 57 GLY 57 83 83 GLY GLY B . n B 1 58 ARG 58 84 84 ARG ARG B . n B 1 59 CYS 59 85 85 CYS CYS B . n B 1 60 PRO 60 86 86 PRO PRO B . n B 1 61 VAL 61 87 87 VAL VAL B . n B 1 62 PRO 62 88 88 PRO PRO B . n B 1 63 ASP 63 89 89 ASP ASP B . n B 1 64 ALA 64 90 90 ALA ALA B . n B 1 65 TRP 65 91 91 TRP TRP B . n B 1 66 TYR 66 92 92 TYR TYR B . n B 1 67 PHE 67 93 93 PHE PHE B . n B 1 68 TYR 68 94 94 TYR TYR B . n B 1 69 TYR 69 95 95 TYR TYR B . n B 1 70 THR 70 96 96 THR THR B . n B 1 71 GLY 71 97 97 GLY GLY B . n B 1 72 THR 72 98 98 THR THR B . n B 1 73 GLY 73 99 99 GLY GLY B . n B 1 74 PRO 74 100 100 PRO PRO B . n B 1 75 ALA 75 101 101 ALA ALA B . n B 1 76 ALA 76 102 102 ALA ALA B . n B 1 77 ASP 77 103 103 ASP ASP B . n B 1 78 LEU 78 104 104 LEU LEU B . n B 1 79 ASN 79 105 105 ASN ASN B . n B 1 80 TRP 80 106 106 TRP TRP B . n B 1 81 GLY 81 107 107 GLY GLY B . n B 1 82 ASP 82 108 108 ASP ASP B . n B 1 83 THR 83 109 109 THR THR B . n B 1 84 GLN 84 110 110 GLN GLN B . n B 1 85 ASP 85 111 111 ASP ASP B . n B 1 86 GLY 86 112 112 GLY GLY B . n B 1 87 ILE 87 113 113 ILE ILE B . n B 1 88 VAL 88 114 114 VAL VAL B . n B 1 89 TRP 89 115 115 TRP TRP B . n B 1 90 VAL 90 116 116 VAL VAL B . n B 1 91 ALA 91 117 117 ALA ALA B . n B 1 92 ALA 92 118 118 ALA ALA B . n B 1 93 LYS 93 119 119 LYS LYS B . n B 1 94 GLY 94 120 120 GLY GLY B . n B 1 95 ALA 95 121 121 ALA ALA B . n B 1 96 ASP 96 122 122 ASP ASP B . n B 1 97 THR 97 123 123 THR THR B . n B 1 98 LYS 98 124 124 LYS LYS B . n B 1 99 SER 99 125 125 SER SER B . n B 1 100 ARG 100 126 126 ARG ARG B . n B 1 101 SER 101 127 127 SER SER B . n B 1 102 ASN 102 128 128 ASN ASN B . n B 1 103 GLN 103 129 129 GLN GLN B . n B 1 104 GLY 104 130 130 GLY GLY B . n B 1 105 THR 105 131 131 THR THR B . n B 1 106 ARG 106 132 132 ARG ARG B . n B 1 107 ASP 107 133 133 ASP ASP B . n B 1 108 PRO 108 134 134 PRO PRO B . n B 1 109 ASP 109 135 135 ASP ASP B . n B 1 110 LYS 110 136 136 LYS LYS B . n B 1 111 PHE 111 137 137 PHE PHE B . n B 1 112 ASP 112 138 138 ASP ASP B . n B 1 113 GLN 113 139 139 GLN GLN B . n B 1 114 TYR 114 140 140 TYR TYR B . n B 1 115 PRO 115 141 141 PRO PRO B . n B 1 116 LEU 116 142 142 LEU LEU B . n B 1 117 ARG 117 143 143 ARG ARG B . n B 1 118 PHE 118 144 144 PHE PHE B . n B 1 119 SER 119 145 145 SER SER B . n B 1 120 ASP 120 146 146 ASP ASP B . n B 1 121 GLY 121 147 147 GLY GLY B . n B 1 122 GLY 122 148 148 GLY GLY B . n B 1 123 PRO 123 149 149 PRO PRO B . n B 1 124 ASP 124 150 150 ASP ASP B . n B 1 125 GLY 125 151 151 GLY GLY B . n B 1 126 ASN 126 152 152 ASN ASN B . n B 1 127 PHE 127 153 153 PHE PHE B . n B 1 128 ARG 128 154 154 ARG ARG B . n B 1 129 TRP 129 155 155 TRP TRP B . n B 1 130 ASP 130 156 156 ASP ASP B . n B 1 131 PHE 131 157 157 PHE PHE B . n B 1 132 ILE 132 158 158 ILE ILE B . n B 1 133 PRO 133 159 159 PRO PRO B . n B 1 134 LEU 134 160 160 LEU LEU B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 2001 2001 HOH HOH A . C 2 HOH 2 2002 2002 HOH HOH A . C 2 HOH 3 2003 2003 HOH HOH A . C 2 HOH 4 2004 2004 HOH HOH A . C 2 HOH 5 2005 2005 HOH HOH A . C 2 HOH 6 2006 2006 HOH HOH A . C 2 HOH 7 2007 2007 HOH HOH A . C 2 HOH 8 2008 2008 HOH HOH A . C 2 HOH 9 2009 2009 HOH HOH A . C 2 HOH 10 2010 2010 HOH HOH A . C 2 HOH 11 2011 2011 HOH HOH A . C 2 HOH 12 2012 2012 HOH HOH A . C 2 HOH 13 2013 2013 HOH HOH A . C 2 HOH 14 2014 2014 HOH HOH A . C 2 HOH 15 2015 2015 HOH HOH A . C 2 HOH 16 2016 2016 HOH HOH A . C 2 HOH 17 2017 2017 HOH HOH A . C 2 HOH 18 2018 2018 HOH HOH A . C 2 HOH 19 2019 2019 HOH HOH A . C 2 HOH 20 2020 2020 HOH HOH A . D 2 HOH 1 2001 2001 HOH HOH B . D 2 HOH 2 2002 2002 HOH HOH B . D 2 HOH 3 2003 2003 HOH HOH B . D 2 HOH 4 2004 2004 HOH HOH B . D 2 HOH 5 2005 2005 HOH HOH B . D 2 HOH 6 2006 2006 HOH HOH B . D 2 HOH 7 2007 2007 HOH HOH B . D 2 HOH 8 2008 2008 HOH HOH B . D 2 HOH 9 2009 2009 HOH HOH B . D 2 HOH 10 2010 2010 HOH HOH B . D 2 HOH 11 2011 2011 HOH HOH B . D 2 HOH 12 2012 2012 HOH HOH B . D 2 HOH 13 2013 2013 HOH HOH B . D 2 HOH 14 2014 2014 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PQS monomeric 1 2 author_and_software_defined_assembly PQS monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C 2 1 B,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-06-21 2 'Structure model' 1 1 2011-05-08 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-12-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' Other 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_database_status 5 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_database_status.status_code_sf' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0005 ? 1 MOSFLM 'data reduction' . ? 2 CCP4 'data scaling' . ? 3 MOLREP phasing . ? 4 # _pdbx_entry_details.entry_id 2C86 _pdbx_entry_details.compound_details ;MAJOR STRUCTURAL COMPONENT OF VIRIONS ENGINEERED RESIDUE IN CHAIN A, LYS 85 TO CYS ENGINEERED RESIDUE IN CHAIN B, LYS 85 TO CYS ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 C _pdbx_validate_rmsd_angle.auth_asym_id_1 B _pdbx_validate_rmsd_angle.auth_comp_id_1 LYS _pdbx_validate_rmsd_angle.auth_seq_id_1 63 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 N _pdbx_validate_rmsd_angle.auth_asym_id_2 B _pdbx_validate_rmsd_angle.auth_comp_id_2 PRO _pdbx_validate_rmsd_angle.auth_seq_id_2 64 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CA _pdbx_validate_rmsd_angle.auth_asym_id_3 B _pdbx_validate_rmsd_angle.auth_comp_id_3 PRO _pdbx_validate_rmsd_angle.auth_seq_id_3 64 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 129.70 _pdbx_validate_rmsd_angle.angle_target_value 119.30 _pdbx_validate_rmsd_angle.angle_deviation 10.40 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.50 _pdbx_validate_rmsd_angle.linker_flag Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 32 ? ? 81.55 -11.92 2 1 GLN A 37 ? ? -35.79 150.07 3 1 LYS A 42 ? ? -72.59 -74.29 4 1 LEU A 44 ? ? -78.49 -166.56 5 1 ASN A 45 ? ? 24.22 42.65 6 1 ILE A 62 ? ? -175.45 146.27 7 1 LYS A 81 ? ? -64.84 -86.54 8 1 PRO A 86 ? ? -65.45 86.92 9 1 ASP A 89 ? ? -64.59 -176.70 10 1 THR A 96 ? ? -37.41 123.92 11 1 ASP A 122 ? ? -69.66 95.44 12 1 PRO A 134 ? ? -69.03 27.48 13 1 PHE A 144 ? ? -156.69 50.44 14 1 ASP A 156 ? ? -44.88 150.29 15 1 SER B 29 ? ? 64.00 -131.78 16 1 LYS B 42 ? ? -76.03 -70.52 17 1 LEU B 44 ? ? -68.19 -168.91 18 1 ASN B 45 ? ? 19.83 75.46 19 1 PRO B 47 ? ? -49.64 164.77 20 1 SER B 54 ? ? -55.55 -78.21 21 1 ASN B 61 ? ? -66.28 27.44 22 1 PRO B 64 ? ? -22.31 -33.29 23 1 GLN B 67 ? ? -63.79 82.88 24 1 THR B 96 ? ? -43.10 98.87 25 1 PRO B 100 ? ? -69.09 1.61 26 1 ASP B 108 ? ? -48.80 100.98 27 1 GLN B 110 ? ? -170.38 128.33 28 1 LYS B 119 ? ? -23.65 128.05 29 1 PHE B 137 ? ? -169.92 21.84 30 1 ASP B 138 ? ? -45.48 156.46 31 1 ARG B 143 ? ? -101.07 -169.25 32 1 PHE B 144 ? ? 171.63 72.44 33 1 ASN B 152 ? ? -147.23 -5.71 34 1 PRO B 159 ? ? -34.38 148.94 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TRP N N N N 321 TRP CA C N S 322 TRP C C N N 323 TRP O O N N 324 TRP CB C N N 325 TRP CG C Y N 326 TRP CD1 C Y N 327 TRP CD2 C Y N 328 TRP NE1 N Y N 329 TRP CE2 C Y N 330 TRP CE3 C Y N 331 TRP CZ2 C Y N 332 TRP CZ3 C Y N 333 TRP CH2 C Y N 334 TRP OXT O N N 335 TRP H H N N 336 TRP H2 H N N 337 TRP HA H N N 338 TRP HB2 H N N 339 TRP HB3 H N N 340 TRP HD1 H N N 341 TRP HE1 H N N 342 TRP HE3 H N N 343 TRP HZ2 H N N 344 TRP HZ3 H N N 345 TRP HH2 H N N 346 TRP HXT H N N 347 TYR N N N N 348 TYR CA C N S 349 TYR C C N N 350 TYR O O N N 351 TYR CB C N N 352 TYR CG C Y N 353 TYR CD1 C Y N 354 TYR CD2 C Y N 355 TYR CE1 C Y N 356 TYR CE2 C Y N 357 TYR CZ C Y N 358 TYR OH O N N 359 TYR OXT O N N 360 TYR H H N N 361 TYR H2 H N N 362 TYR HA H N N 363 TYR HB2 H N N 364 TYR HB3 H N N 365 TYR HD1 H N N 366 TYR HD2 H N N 367 TYR HE1 H N N 368 TYR HE2 H N N 369 TYR HH H N N 370 TYR HXT H N N 371 VAL N N N N 372 VAL CA C N S 373 VAL C C N N 374 VAL O O N N 375 VAL CB C N N 376 VAL CG1 C N N 377 VAL CG2 C N N 378 VAL OXT O N N 379 VAL H H N N 380 VAL H2 H N N 381 VAL HA H N N 382 VAL HB H N N 383 VAL HG11 H N N 384 VAL HG12 H N N 385 VAL HG13 H N N 386 VAL HG21 H N N 387 VAL HG22 H N N 388 VAL HG23 H N N 389 VAL HXT H N N 390 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1BTL _pdbx_initial_refinement_model.details 'PDB ENTRY 1BTL' #