data_2CPH # _entry.id 2CPH # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2CPH pdb_00002cph 10.2210/pdb2cph/pdb RCSB RCSB024479 ? ? WWPDB D_1000024479 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id mmt007011210.11 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2CPH _pdbx_database_status.recvd_initial_deposition_date 2005-05-19 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nagata, T.' 1 'Muto, Y.' 2 'Inoue, M.' 3 'Kigawa, T.' 4 'Terada, T.' 5 'Shirouzu, M.' 6 'Yokoyama, S.' 7 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 8 # _citation.id primary _citation.title 'Solution structure of the C-terminal RNA recognition motif of hypothetical RNA-binding protein RBM19' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nagata, T.' 1 ? primary 'Muto, Y.' 2 ? primary 'Inoue, M.' 3 ? primary 'Kigawa, T.' 4 ? primary 'Terada, T.' 5 ? primary 'Shirouzu, M.' 6 ? primary 'Yokoyama, S.' 7 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'RNA binding motif protein 19' _entity.formula_weight 11773.376 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'RNA recognition motif' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGQVPKKQTTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCH STHLYGRRLVLEWADSEVTVQSGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGQVPKKQTTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCH STHLYGRRLVLEWADSEVTVQSGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier mmt007011210.11 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 GLN n 1 9 VAL n 1 10 PRO n 1 11 LYS n 1 12 LYS n 1 13 GLN n 1 14 THR n 1 15 THR n 1 16 SER n 1 17 LYS n 1 18 ILE n 1 19 LEU n 1 20 VAL n 1 21 ARG n 1 22 ASN n 1 23 ILE n 1 24 PRO n 1 25 PHE n 1 26 GLN n 1 27 ALA n 1 28 ASN n 1 29 GLN n 1 30 ARG n 1 31 GLU n 1 32 ILE n 1 33 ARG n 1 34 GLU n 1 35 LEU n 1 36 PHE n 1 37 SER n 1 38 THR n 1 39 PHE n 1 40 GLY n 1 41 GLU n 1 42 LEU n 1 43 LYS n 1 44 THR n 1 45 VAL n 1 46 ARG n 1 47 LEU n 1 48 PRO n 1 49 LYS n 1 50 LYS n 1 51 MET n 1 52 THR n 1 53 GLY n 1 54 THR n 1 55 GLY n 1 56 ALA n 1 57 HIS n 1 58 ARG n 1 59 GLY n 1 60 PHE n 1 61 GLY n 1 62 PHE n 1 63 VAL n 1 64 ASP n 1 65 PHE n 1 66 ILE n 1 67 THR n 1 68 LYS n 1 69 GLN n 1 70 ASP n 1 71 ALA n 1 72 LYS n 1 73 LYS n 1 74 ALA n 1 75 PHE n 1 76 ASN n 1 77 ALA n 1 78 LEU n 1 79 CYS n 1 80 HIS n 1 81 SER n 1 82 THR n 1 83 HIS n 1 84 LEU n 1 85 TYR n 1 86 GLY n 1 87 ARG n 1 88 ARG n 1 89 LEU n 1 90 VAL n 1 91 LEU n 1 92 GLU n 1 93 TRP n 1 94 ALA n 1 95 ASP n 1 96 SER n 1 97 GLU n 1 98 VAL n 1 99 THR n 1 100 VAL n 1 101 GLN n 1 102 SER n 1 103 GLY n 1 104 PRO n 1 105 SER n 1 106 SER n 1 107 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'house mouse' _entity_src_gen.gene_src_genus Mus _entity_src_gen.pdbx_gene_src_gene Rbm19 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name p040705-04 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell-free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RBM19_MOUSE _struct_ref.pdbx_db_accession Q8R3C6 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;QVPKKQTTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYGR RLVLEWADSEVTVQ ; _struct_ref.pdbx_align_begin 816 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2CPH _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 101 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8R3C6 _struct_ref_seq.db_align_beg 816 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 909 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 454 _struct_ref_seq.pdbx_auth_seq_align_end 547 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2CPH GLY A 1 ? UNP Q8R3C6 ? ? 'cloning artifact' 447 1 1 2CPH SER A 2 ? UNP Q8R3C6 ? ? 'cloning artifact' 448 2 1 2CPH SER A 3 ? UNP Q8R3C6 ? ? 'cloning artifact' 449 3 1 2CPH GLY A 4 ? UNP Q8R3C6 ? ? 'cloning artifact' 450 4 1 2CPH SER A 5 ? UNP Q8R3C6 ? ? 'cloning artifact' 451 5 1 2CPH SER A 6 ? UNP Q8R3C6 ? ? 'cloning artifact' 452 6 1 2CPH GLY A 7 ? UNP Q8R3C6 ? ? 'cloning artifact' 453 7 1 2CPH SER A 102 ? UNP Q8R3C6 ? ? 'cloning artifact' 548 8 1 2CPH GLY A 103 ? UNP Q8R3C6 ? ? 'cloning artifact' 549 9 1 2CPH PRO A 104 ? UNP Q8R3C6 ? ? 'cloning artifact' 550 10 1 2CPH SER A 105 ? UNP Q8R3C6 ? ? 'cloning artifact' 551 11 1 2CPH SER A 106 ? UNP Q8R3C6 ? ? 'cloning artifact' 552 12 1 2CPH GLY A 107 ? UNP Q8R3C6 ? ? 'cloning artifact' 553 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_15N-separated_NOESY 1 2 1 3D_13C-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1.20mM 13C/15N-PROTEIN; 20mM d-Tris-HCl(pH7.0); 100mM NaCl; 1mM d-DTT; 0.02% NaN3' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2CPH _pdbx_nmr_refine.method 'torsion angle dyanamics, simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2CPH _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function,structures with the lowest energy,structures with the least restraint violations' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2CPH _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 3.5 Bruker 1 processing NMRPipe ': 20030801/20031121' 'Delaglio, F.' 2 'data analysis' NMRView 5.0.4 'Johnson, B.A.' 3 'data analysis' KUJIRA 0.925 'Kobayashi, N.' 4 'structure solution' CYANA 2.0.17 'Guntert, P.' 5 refinement CYANA 2.0.17 'Guntert, P.' 6 # _exptl.entry_id 2CPH _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2CPH _struct.title 'Solution structure of the C-terminal RNA recognition motif of hypothetical RNA-binding protein RBM19' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2CPH _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS, UNKNOWN FUNCTION' _struct_keywords.text ;RNA recognition motif, RRM, RNP, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, UNKNOWN FUNCTION ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLN A 29 ? PHE A 36 ? GLN A 475 PHE A 482 1 ? 8 HELX_P HELX_P2 2 LYS A 68 ? LEU A 78 ? LYS A 514 LEU A 524 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 4 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 42 ? ARG A 46 ? LEU A 488 ARG A 492 A 2 PHE A 60 ? PHE A 65 ? PHE A 506 PHE A 511 A 3 ILE A 18 ? ARG A 21 ? ILE A 464 ARG A 467 A 4 VAL A 90 ? TRP A 93 ? VAL A 536 TRP A 539 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ARG A 46 ? N ARG A 492 O PHE A 62 ? O PHE A 508 A 2 3 O VAL A 63 ? O VAL A 509 N ILE A 18 ? N ILE A 464 A 3 4 N ARG A 21 ? N ARG A 467 O VAL A 90 ? O VAL A 536 # _database_PDB_matrix.entry_id 2CPH _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2CPH _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 447 447 GLY GLY A . n A 1 2 SER 2 448 448 SER SER A . n A 1 3 SER 3 449 449 SER SER A . n A 1 4 GLY 4 450 450 GLY GLY A . n A 1 5 SER 5 451 451 SER SER A . n A 1 6 SER 6 452 452 SER SER A . n A 1 7 GLY 7 453 453 GLY GLY A . n A 1 8 GLN 8 454 454 GLN GLN A . n A 1 9 VAL 9 455 455 VAL VAL A . n A 1 10 PRO 10 456 456 PRO PRO A . n A 1 11 LYS 11 457 457 LYS LYS A . n A 1 12 LYS 12 458 458 LYS LYS A . n A 1 13 GLN 13 459 459 GLN GLN A . n A 1 14 THR 14 460 460 THR THR A . n A 1 15 THR 15 461 461 THR THR A . n A 1 16 SER 16 462 462 SER SER A . n A 1 17 LYS 17 463 463 LYS LYS A . n A 1 18 ILE 18 464 464 ILE ILE A . n A 1 19 LEU 19 465 465 LEU LEU A . n A 1 20 VAL 20 466 466 VAL VAL A . n A 1 21 ARG 21 467 467 ARG ARG A . n A 1 22 ASN 22 468 468 ASN ASN A . n A 1 23 ILE 23 469 469 ILE ILE A . n A 1 24 PRO 24 470 470 PRO PRO A . n A 1 25 PHE 25 471 471 PHE PHE A . n A 1 26 GLN 26 472 472 GLN GLN A . n A 1 27 ALA 27 473 473 ALA ALA A . n A 1 28 ASN 28 474 474 ASN ASN A . n A 1 29 GLN 29 475 475 GLN GLN A . n A 1 30 ARG 30 476 476 ARG ARG A . n A 1 31 GLU 31 477 477 GLU GLU A . n A 1 32 ILE 32 478 478 ILE ILE A . n A 1 33 ARG 33 479 479 ARG ARG A . n A 1 34 GLU 34 480 480 GLU GLU A . n A 1 35 LEU 35 481 481 LEU LEU A . n A 1 36 PHE 36 482 482 PHE PHE A . n A 1 37 SER 37 483 483 SER SER A . n A 1 38 THR 38 484 484 THR THR A . n A 1 39 PHE 39 485 485 PHE PHE A . n A 1 40 GLY 40 486 486 GLY GLY A . n A 1 41 GLU 41 487 487 GLU GLU A . n A 1 42 LEU 42 488 488 LEU LEU A . n A 1 43 LYS 43 489 489 LYS LYS A . n A 1 44 THR 44 490 490 THR THR A . n A 1 45 VAL 45 491 491 VAL VAL A . n A 1 46 ARG 46 492 492 ARG ARG A . n A 1 47 LEU 47 493 493 LEU LEU A . n A 1 48 PRO 48 494 494 PRO PRO A . n A 1 49 LYS 49 495 495 LYS LYS A . n A 1 50 LYS 50 496 496 LYS LYS A . n A 1 51 MET 51 497 497 MET MET A . n A 1 52 THR 52 498 498 THR THR A . n A 1 53 GLY 53 499 499 GLY GLY A . n A 1 54 THR 54 500 500 THR THR A . n A 1 55 GLY 55 501 501 GLY GLY A . n A 1 56 ALA 56 502 502 ALA ALA A . n A 1 57 HIS 57 503 503 HIS HIS A . n A 1 58 ARG 58 504 504 ARG ARG A . n A 1 59 GLY 59 505 505 GLY GLY A . n A 1 60 PHE 60 506 506 PHE PHE A . n A 1 61 GLY 61 507 507 GLY GLY A . n A 1 62 PHE 62 508 508 PHE PHE A . n A 1 63 VAL 63 509 509 VAL VAL A . n A 1 64 ASP 64 510 510 ASP ASP A . n A 1 65 PHE 65 511 511 PHE PHE A . n A 1 66 ILE 66 512 512 ILE ILE A . n A 1 67 THR 67 513 513 THR THR A . n A 1 68 LYS 68 514 514 LYS LYS A . n A 1 69 GLN 69 515 515 GLN GLN A . n A 1 70 ASP 70 516 516 ASP ASP A . n A 1 71 ALA 71 517 517 ALA ALA A . n A 1 72 LYS 72 518 518 LYS LYS A . n A 1 73 LYS 73 519 519 LYS LYS A . n A 1 74 ALA 74 520 520 ALA ALA A . n A 1 75 PHE 75 521 521 PHE PHE A . n A 1 76 ASN 76 522 522 ASN ASN A . n A 1 77 ALA 77 523 523 ALA ALA A . n A 1 78 LEU 78 524 524 LEU LEU A . n A 1 79 CYS 79 525 525 CYS CYS A . n A 1 80 HIS 80 526 526 HIS HIS A . n A 1 81 SER 81 527 527 SER SER A . n A 1 82 THR 82 528 528 THR THR A . n A 1 83 HIS 83 529 529 HIS HIS A . n A 1 84 LEU 84 530 530 LEU LEU A . n A 1 85 TYR 85 531 531 TYR TYR A . n A 1 86 GLY 86 532 532 GLY GLY A . n A 1 87 ARG 87 533 533 ARG ARG A . n A 1 88 ARG 88 534 534 ARG ARG A . n A 1 89 LEU 89 535 535 LEU LEU A . n A 1 90 VAL 90 536 536 VAL VAL A . n A 1 91 LEU 91 537 537 LEU LEU A . n A 1 92 GLU 92 538 538 GLU GLU A . n A 1 93 TRP 93 539 539 TRP TRP A . n A 1 94 ALA 94 540 540 ALA ALA A . n A 1 95 ASP 95 541 541 ASP ASP A . n A 1 96 SER 96 542 542 SER SER A . n A 1 97 GLU 97 543 543 GLU GLU A . n A 1 98 VAL 98 544 544 VAL VAL A . n A 1 99 THR 99 545 545 THR THR A . n A 1 100 VAL 100 546 546 VAL VAL A . n A 1 101 GLN 101 547 547 GLN GLN A . n A 1 102 SER 102 548 548 SER SER A . n A 1 103 GLY 103 549 549 GLY GLY A . n A 1 104 PRO 104 550 550 PRO PRO A . n A 1 105 SER 105 551 551 SER SER A . n A 1 106 SER 106 552 552 SER SER A . n A 1 107 GLY 107 553 553 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-11-19 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_remark.id 650 _pdbx_database_remark.text ;HELIX DETERMINATION METHOD: AUTHOR DETERMINED ; # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLN A 454 ? ? -49.30 178.69 2 1 LEU A 481 ? ? -37.78 -38.49 3 1 THR A 498 ? ? -39.81 95.08 4 1 ALA A 502 ? ? -95.03 -74.97 5 1 ARG A 504 ? ? -64.79 -178.66 6 1 SER A 527 ? ? -166.20 106.88 7 1 SER A 548 ? ? -101.41 -64.66 8 1 PRO A 550 ? ? -69.81 -177.20 9 2 GLN A 454 ? ? -173.28 140.27 10 2 ARG A 479 ? ? -48.82 -70.41 11 2 THR A 490 ? ? -174.86 136.57 12 2 MET A 497 ? ? -103.69 -61.59 13 2 SER A 548 ? ? -44.38 168.97 14 3 SER A 452 ? ? -50.61 91.87 15 3 GLN A 454 ? ? -42.49 150.87 16 3 LYS A 457 ? ? -34.82 121.05 17 3 THR A 484 ? ? -39.71 -36.25 18 3 THR A 490 ? ? -174.51 140.67 19 3 ALA A 502 ? ? -121.00 -55.45 20 3 LYS A 519 ? ? -40.20 -70.34 21 3 SER A 527 ? ? -173.84 109.83 22 4 PRO A 470 ? ? -69.78 -166.09 23 4 THR A 498 ? ? -64.72 74.94 24 4 CYS A 525 ? ? -35.99 -32.52 25 4 SER A 527 ? ? -170.19 109.40 26 4 ASP A 541 ? ? -106.18 78.00 27 5 THR A 490 ? ? -173.03 131.14 28 5 THR A 498 ? ? -112.27 62.07 29 5 CYS A 525 ? ? -38.23 -39.66 30 5 SER A 527 ? ? -170.83 105.91 31 6 SER A 451 ? ? -83.61 47.74 32 6 THR A 460 ? ? -67.74 82.84 33 6 ALA A 473 ? ? -39.13 124.07 34 6 THR A 498 ? ? 34.41 40.94 35 6 THR A 500 ? ? -45.88 108.32 36 6 SER A 527 ? ? -167.68 116.50 37 6 ALA A 540 ? ? -39.93 154.21 38 7 SER A 448 ? ? -173.64 114.51 39 7 SER A 483 ? ? -37.25 -35.67 40 7 THR A 490 ? ? -174.00 148.83 41 7 THR A 500 ? ? -54.60 102.90 42 7 HIS A 503 ? ? -54.84 170.84 43 7 VAL A 546 ? ? 35.83 39.81 44 7 SER A 548 ? ? -132.05 -44.69 45 7 SER A 551 ? ? -97.87 -61.43 46 8 SER A 451 ? ? -127.69 -52.45 47 8 ASN A 468 ? ? 70.39 32.36 48 8 SER A 483 ? ? -38.51 -34.10 49 8 THR A 498 ? ? -41.14 94.79 50 8 SER A 527 ? ? -160.72 105.91 51 8 TYR A 531 ? ? 46.11 28.14 52 8 PRO A 550 ? ? -69.74 1.15 53 9 SER A 451 ? ? -83.40 39.02 54 9 SER A 452 ? ? 37.78 51.60 55 9 LYS A 496 ? ? -49.66 106.06 56 9 THR A 498 ? ? -49.45 163.09 57 9 ALA A 502 ? ? -88.42 -74.82 58 9 SER A 527 ? ? -173.62 105.96 59 9 ALA A 540 ? ? -35.34 145.09 60 10 LYS A 458 ? ? -129.97 -59.52 61 10 ASN A 468 ? ? 71.31 43.00 62 10 ALA A 473 ? ? -50.19 107.47 63 10 GLN A 515 ? ? -35.91 -70.87 64 10 SER A 527 ? ? -174.27 108.25 65 10 ALA A 540 ? ? -43.20 158.29 66 10 GLN A 547 ? ? -163.69 116.06 67 11 THR A 484 ? ? -39.18 -26.94 68 11 THR A 490 ? ? -172.41 136.22 69 11 THR A 498 ? ? 29.17 40.14 70 11 ALA A 502 ? ? -106.31 44.25 71 11 VAL A 546 ? ? 35.39 43.07 72 11 SER A 551 ? ? 38.47 43.77 73 12 PRO A 456 ? ? -69.75 92.23 74 12 GLN A 459 ? ? -104.24 73.65 75 12 ARG A 479 ? ? -42.47 -71.03 76 12 SER A 483 ? ? -36.48 -31.91 77 12 THR A 490 ? ? -173.87 131.10 78 12 ALA A 520 ? ? -54.79 -70.69 79 12 SER A 527 ? ? -169.83 114.85 80 13 LYS A 458 ? ? -97.38 36.95 81 13 THR A 484 ? ? -38.03 -34.28 82 13 THR A 490 ? ? -173.78 132.74 83 13 MET A 497 ? ? -124.04 -50.50 84 13 THR A 498 ? ? -50.32 173.96 85 13 ALA A 502 ? ? -122.70 -64.64 86 13 SER A 527 ? ? -170.48 109.22 87 14 GLN A 454 ? ? -44.28 157.87 88 14 THR A 490 ? ? -172.88 133.65 89 14 SER A 527 ? ? -171.60 108.93 90 15 LYS A 457 ? ? -34.40 125.39 91 15 SER A 483 ? ? -37.24 -39.80 92 15 THR A 490 ? ? -174.03 147.20 93 15 SER A 527 ? ? -170.84 105.36 94 16 SER A 451 ? ? -172.01 127.83 95 16 PRO A 456 ? ? -69.75 2.48 96 16 LYS A 457 ? ? -34.34 118.75 97 16 GLN A 459 ? ? -51.12 86.71 98 16 THR A 490 ? ? -172.98 149.87 99 16 THR A 498 ? ? 36.14 45.90 100 16 THR A 500 ? ? -81.75 40.21 101 16 LYS A 519 ? ? -48.32 -71.28 102 16 SER A 527 ? ? -174.50 105.46 103 16 SER A 548 ? ? 36.34 47.10 104 17 PRO A 456 ? ? -69.77 2.09 105 17 LYS A 458 ? ? 33.26 41.55 106 17 SER A 527 ? ? -166.72 106.33 107 17 PRO A 550 ? ? -69.76 -171.66 108 17 SER A 552 ? ? -160.79 119.56 109 18 LYS A 458 ? ? -34.45 -71.99 110 18 HIS A 526 ? ? -41.49 -70.09 111 19 SER A 452 ? ? -173.55 117.21 112 19 GLN A 454 ? ? -118.73 71.08 113 19 THR A 460 ? ? 34.54 51.76 114 19 THR A 461 ? ? -44.85 168.76 115 19 THR A 490 ? ? -174.13 138.89 116 19 HIS A 503 ? ? -56.56 101.12 117 19 SER A 527 ? ? -163.92 106.12 118 19 ASP A 541 ? ? -108.66 79.15 119 20 PRO A 456 ? ? -69.74 2.54 120 20 THR A 500 ? ? 37.91 41.47 121 20 SER A 527 ? ? -172.46 106.31 122 20 THR A 545 ? ? -44.77 156.83 #