data_2CQ4 # _entry.id 2CQ4 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2CQ4 pdb_00002cq4 10.2210/pdb2cq4/pdb RCSB RCSB024495 ? ? WWPDB D_1000024495 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hsi002012635.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2CQ4 _pdbx_database_status.recvd_initial_deposition_date 2005-05-19 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tsuda, K.' 1 'Muto, Y.' 2 'Inoue, M.' 3 'Kigawa, T.' 4 'Terada, T.' 5 'Shirouzu, M.' 6 'Yokoyama, S.' 7 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 8 # _citation.id primary _citation.title 'solution structure of RNA binding domain in RNA binding motif protein 23' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Tsuda, K.' 1 ? primary 'Muto, Y.' 2 ? primary 'Inoue, M.' 3 ? primary 'Kigawa, T.' 4 ? primary 'Terada, T.' 5 ? primary 'Shirouzu, M.' 6 ? primary 'Yokoyama, S.' 7 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'RNA binding motif protein 23' _entity.formula_weight 12374.029 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'RNA recognition motif' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSV PLAIGLTGQRLLGVPIIVQASQAEKNRLSGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSV PLAIGLTGQRLLGVPIIVQASQAEKNRLSGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hsi002012635.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 LYS n 1 9 SER n 1 10 PRO n 1 11 VAL n 1 12 ARG n 1 13 GLU n 1 14 PRO n 1 15 VAL n 1 16 ASP n 1 17 ASN n 1 18 LEU n 1 19 SER n 1 20 PRO n 1 21 GLU n 1 22 GLU n 1 23 ARG n 1 24 ASP n 1 25 ALA n 1 26 ARG n 1 27 THR n 1 28 VAL n 1 29 PHE n 1 30 CYS n 1 31 MET n 1 32 GLN n 1 33 LEU n 1 34 ALA n 1 35 ALA n 1 36 ARG n 1 37 ILE n 1 38 ARG n 1 39 PRO n 1 40 ARG n 1 41 ASP n 1 42 LEU n 1 43 GLU n 1 44 ASP n 1 45 PHE n 1 46 PHE n 1 47 SER n 1 48 ALA n 1 49 VAL n 1 50 GLY n 1 51 LYS n 1 52 VAL n 1 53 ARG n 1 54 ASP n 1 55 VAL n 1 56 ARG n 1 57 ILE n 1 58 ILE n 1 59 SER n 1 60 ASP n 1 61 ARG n 1 62 ASN n 1 63 SER n 1 64 ARG n 1 65 ARG n 1 66 SER n 1 67 LYS n 1 68 GLY n 1 69 ILE n 1 70 ALA n 1 71 TYR n 1 72 VAL n 1 73 GLU n 1 74 PHE n 1 75 CYS n 1 76 GLU n 1 77 ILE n 1 78 GLN n 1 79 SER n 1 80 VAL n 1 81 PRO n 1 82 LEU n 1 83 ALA n 1 84 ILE n 1 85 GLY n 1 86 LEU n 1 87 THR n 1 88 GLY n 1 89 GLN n 1 90 ARG n 1 91 LEU n 1 92 LEU n 1 93 GLY n 1 94 VAL n 1 95 PRO n 1 96 ILE n 1 97 ILE n 1 98 VAL n 1 99 GLN n 1 100 ALA n 1 101 SER n 1 102 GLN n 1 103 ALA n 1 104 GLU n 1 105 LYS n 1 106 ASN n 1 107 ARG n 1 108 LEU n 1 109 SER n 1 110 GLY n 1 111 PRO n 1 112 SER n 1 113 SER n 1 114 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene RBM23 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P050131-08 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell-free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RBM23_HUMAN _struct_ref.pdbx_db_accession Q86U06 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;KSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLT GQRLLGVPIIVQASQAEKNRL ; _struct_ref.pdbx_align_begin 132 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2CQ4 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 108 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q86U06 _struct_ref_seq.db_align_beg 132 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 232 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 132 _struct_ref_seq.pdbx_auth_seq_align_end 232 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2CQ4 GLY A 1 ? UNP Q86U06 ? ? 'cloning artifact' 125 1 1 2CQ4 SER A 2 ? UNP Q86U06 ? ? 'cloning artifact' 126 2 1 2CQ4 SER A 3 ? UNP Q86U06 ? ? 'cloning artifact' 127 3 1 2CQ4 GLY A 4 ? UNP Q86U06 ? ? 'cloning artifact' 128 4 1 2CQ4 SER A 5 ? UNP Q86U06 ? ? 'cloning artifact' 129 5 1 2CQ4 SER A 6 ? UNP Q86U06 ? ? 'cloning artifact' 130 6 1 2CQ4 GLY A 7 ? UNP Q86U06 ? ? 'cloning artifact' 131 7 1 2CQ4 SER A 109 ? UNP Q86U06 ? ? 'cloning artifact' 233 8 1 2CQ4 GLY A 110 ? UNP Q86U06 ? ? 'cloning artifact' 234 9 1 2CQ4 PRO A 111 ? UNP Q86U06 ? ? 'cloning artifact' 235 10 1 2CQ4 SER A 112 ? UNP Q86U06 ? ? 'cloning artifact' 236 11 1 2CQ4 SER A 113 ? UNP Q86U06 ? ? 'cloning artifact' 237 12 1 2CQ4 GLY A 114 ? UNP Q86U06 ? ? 'cloning artifact' 238 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_15N-separated_NOESY 1 2 1 3D_13C-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '2.07mM 13C/15N-PROTEIN, 20mM d-Tris-HCl (pH 7.0), 100mM NaCl, 1mM d-DTT, 0.02% NaN3, 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2CQ4 _pdbx_nmr_refine.method 'torsion angle dynamics, restrainted molecular dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2CQ4 _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function, structures with the lowest energy, structures with the least restraint violations' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2CQ4 _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 3.5 Bruker 1 processing NMRPipe 20030801 'Delaglio, F' 2 'data analysis' NMRView 5.0.4 'Johnson, B.A' 3 'data analysis' KUJIRA 0.9297 'Kobayashi, N' 4 'structure solution' CYANA 2.0.17 'Guntert, P' 5 refinement CYANA 2.0.17 'Guntert, P' 6 # _exptl.entry_id 2CQ4 _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2CQ4 _struct.title 'solution structure of RNA binding domain in RNA binding motif protein 23' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2CQ4 _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN' _struct_keywords.text ;RRM domain, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, RNA BINDING PROTEIN ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU A 21 ? ARG A 26 ? GLU A 145 ARG A 150 1 ? 6 HELX_P HELX_P2 2 ARG A 38 ? SER A 47 ? ARG A 162 SER A 171 1 ? 10 HELX_P HELX_P3 3 GLU A 76 ? GLN A 78 ? GLU A 200 GLN A 202 5 ? 3 HELX_P HELX_P4 4 SER A 79 ? THR A 87 ? SER A 203 THR A 211 1 ? 9 HELX_P HELX_P5 5 SER A 101 ? SER A 109 ? SER A 225 SER A 233 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 52 ? ILE A 57 ? VAL A 176 ILE A 181 A 2 ALA A 70 ? PHE A 74 ? ALA A 194 PHE A 198 A 3 THR A 27 ? MET A 31 ? THR A 151 MET A 155 A 4 VAL A 94 ? ALA A 100 ? VAL A 218 ALA A 224 A 5 GLN A 89 ? LEU A 91 ? GLN A 213 LEU A 215 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ARG A 56 ? N ARG A 180 O TYR A 71 ? O TYR A 195 A 2 3 O ALA A 70 ? O ALA A 194 N CYS A 30 ? N CYS A 154 A 3 4 N MET A 31 ? N MET A 155 O ILE A 97 ? O ILE A 221 A 4 5 O VAL A 94 ? O VAL A 218 N LEU A 91 ? N LEU A 215 # _database_PDB_matrix.entry_id 2CQ4 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2CQ4 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 125 125 GLY GLY A . n A 1 2 SER 2 126 126 SER SER A . n A 1 3 SER 3 127 127 SER SER A . n A 1 4 GLY 4 128 128 GLY GLY A . n A 1 5 SER 5 129 129 SER SER A . n A 1 6 SER 6 130 130 SER SER A . n A 1 7 GLY 7 131 131 GLY GLY A . n A 1 8 LYS 8 132 132 LYS LYS A . n A 1 9 SER 9 133 133 SER SER A . n A 1 10 PRO 10 134 134 PRO PRO A . n A 1 11 VAL 11 135 135 VAL VAL A . n A 1 12 ARG 12 136 136 ARG ARG A . n A 1 13 GLU 13 137 137 GLU GLU A . n A 1 14 PRO 14 138 138 PRO PRO A . n A 1 15 VAL 15 139 139 VAL VAL A . n A 1 16 ASP 16 140 140 ASP ASP A . n A 1 17 ASN 17 141 141 ASN ASN A . n A 1 18 LEU 18 142 142 LEU LEU A . n A 1 19 SER 19 143 143 SER SER A . n A 1 20 PRO 20 144 144 PRO PRO A . n A 1 21 GLU 21 145 145 GLU GLU A . n A 1 22 GLU 22 146 146 GLU GLU A . n A 1 23 ARG 23 147 147 ARG ARG A . n A 1 24 ASP 24 148 148 ASP ASP A . n A 1 25 ALA 25 149 149 ALA ALA A . n A 1 26 ARG 26 150 150 ARG ARG A . n A 1 27 THR 27 151 151 THR THR A . n A 1 28 VAL 28 152 152 VAL VAL A . n A 1 29 PHE 29 153 153 PHE PHE A . n A 1 30 CYS 30 154 154 CYS CYS A . n A 1 31 MET 31 155 155 MET MET A . n A 1 32 GLN 32 156 156 GLN GLN A . n A 1 33 LEU 33 157 157 LEU LEU A . n A 1 34 ALA 34 158 158 ALA ALA A . n A 1 35 ALA 35 159 159 ALA ALA A . n A 1 36 ARG 36 160 160 ARG ARG A . n A 1 37 ILE 37 161 161 ILE ILE A . n A 1 38 ARG 38 162 162 ARG ARG A . n A 1 39 PRO 39 163 163 PRO PRO A . n A 1 40 ARG 40 164 164 ARG ARG A . n A 1 41 ASP 41 165 165 ASP ASP A . n A 1 42 LEU 42 166 166 LEU LEU A . n A 1 43 GLU 43 167 167 GLU GLU A . n A 1 44 ASP 44 168 168 ASP ASP A . n A 1 45 PHE 45 169 169 PHE PHE A . n A 1 46 PHE 46 170 170 PHE PHE A . n A 1 47 SER 47 171 171 SER SER A . n A 1 48 ALA 48 172 172 ALA ALA A . n A 1 49 VAL 49 173 173 VAL VAL A . n A 1 50 GLY 50 174 174 GLY GLY A . n A 1 51 LYS 51 175 175 LYS LYS A . n A 1 52 VAL 52 176 176 VAL VAL A . n A 1 53 ARG 53 177 177 ARG ARG A . n A 1 54 ASP 54 178 178 ASP ASP A . n A 1 55 VAL 55 179 179 VAL VAL A . n A 1 56 ARG 56 180 180 ARG ARG A . n A 1 57 ILE 57 181 181 ILE ILE A . n A 1 58 ILE 58 182 182 ILE ILE A . n A 1 59 SER 59 183 183 SER SER A . n A 1 60 ASP 60 184 184 ASP ASP A . n A 1 61 ARG 61 185 185 ARG ARG A . n A 1 62 ASN 62 186 186 ASN ASN A . n A 1 63 SER 63 187 187 SER SER A . n A 1 64 ARG 64 188 188 ARG ARG A . n A 1 65 ARG 65 189 189 ARG ARG A . n A 1 66 SER 66 190 190 SER SER A . n A 1 67 LYS 67 191 191 LYS LYS A . n A 1 68 GLY 68 192 192 GLY GLY A . n A 1 69 ILE 69 193 193 ILE ILE A . n A 1 70 ALA 70 194 194 ALA ALA A . n A 1 71 TYR 71 195 195 TYR TYR A . n A 1 72 VAL 72 196 196 VAL VAL A . n A 1 73 GLU 73 197 197 GLU GLU A . n A 1 74 PHE 74 198 198 PHE PHE A . n A 1 75 CYS 75 199 199 CYS CYS A . n A 1 76 GLU 76 200 200 GLU GLU A . n A 1 77 ILE 77 201 201 ILE ILE A . n A 1 78 GLN 78 202 202 GLN GLN A . n A 1 79 SER 79 203 203 SER SER A . n A 1 80 VAL 80 204 204 VAL VAL A . n A 1 81 PRO 81 205 205 PRO PRO A . n A 1 82 LEU 82 206 206 LEU LEU A . n A 1 83 ALA 83 207 207 ALA ALA A . n A 1 84 ILE 84 208 208 ILE ILE A . n A 1 85 GLY 85 209 209 GLY GLY A . n A 1 86 LEU 86 210 210 LEU LEU A . n A 1 87 THR 87 211 211 THR THR A . n A 1 88 GLY 88 212 212 GLY GLY A . n A 1 89 GLN 89 213 213 GLN GLN A . n A 1 90 ARG 90 214 214 ARG ARG A . n A 1 91 LEU 91 215 215 LEU LEU A . n A 1 92 LEU 92 216 216 LEU LEU A . n A 1 93 GLY 93 217 217 GLY GLY A . n A 1 94 VAL 94 218 218 VAL VAL A . n A 1 95 PRO 95 219 219 PRO PRO A . n A 1 96 ILE 96 220 220 ILE ILE A . n A 1 97 ILE 97 221 221 ILE ILE A . n A 1 98 VAL 98 222 222 VAL VAL A . n A 1 99 GLN 99 223 223 GLN GLN A . n A 1 100 ALA 100 224 224 ALA ALA A . n A 1 101 SER 101 225 225 SER SER A . n A 1 102 GLN 102 226 226 GLN GLN A . n A 1 103 ALA 103 227 227 ALA ALA A . n A 1 104 GLU 104 228 228 GLU GLU A . n A 1 105 LYS 105 229 229 LYS LYS A . n A 1 106 ASN 106 230 230 ASN ASN A . n A 1 107 ARG 107 231 231 ARG ARG A . n A 1 108 LEU 108 232 232 LEU LEU A . n A 1 109 SER 109 233 233 SER SER A . n A 1 110 GLY 110 234 234 GLY GLY A . n A 1 111 PRO 111 235 235 PRO PRO A . n A 1 112 SER 112 236 236 SER SER A . n A 1 113 SER 113 237 237 SER SER A . n A 1 114 GLY 114 238 238 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-11-19 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 126 ? ? -172.19 143.71 2 1 VAL A 139 ? ? -86.06 41.81 3 1 PRO A 144 ? ? -45.78 -19.01 4 1 ARG A 150 ? ? -83.94 43.99 5 1 ARG A 160 ? ? -118.39 50.96 6 1 THR A 211 ? ? -35.52 102.17 7 1 ARG A 214 ? ? -46.75 107.98 8 1 PRO A 219 ? ? -49.07 152.27 9 1 ASN A 230 ? ? -38.74 -39.90 10 1 SER A 237 ? ? -43.14 159.85 11 2 LEU A 142 ? ? -69.19 94.17 12 2 PRO A 144 ? ? -45.04 -19.42 13 2 ARG A 150 ? ? -83.35 37.70 14 2 ASP A 165 ? ? -38.54 -36.86 15 2 ARG A 188 ? ? -120.93 -59.89 16 2 ARG A 189 ? ? -129.84 -51.20 17 2 THR A 211 ? ? -36.76 118.13 18 2 ARG A 214 ? ? -47.49 104.63 19 2 SER A 225 ? ? -88.57 42.57 20 3 PRO A 134 ? ? -47.23 172.07 21 3 GLU A 137 ? ? -37.26 154.73 22 3 PRO A 144 ? ? -45.19 -19.36 23 3 ARG A 150 ? ? -87.70 43.99 24 3 ARG A 160 ? ? -98.28 42.01 25 3 ASP A 184 ? ? -126.99 -59.18 26 3 SER A 187 ? ? -101.98 -60.32 27 3 THR A 211 ? ? -35.79 98.18 28 3 ARG A 214 ? ? -53.11 108.71 29 3 GLN A 226 ? ? -85.86 43.61 30 3 PRO A 235 ? ? -78.18 42.10 31 4 LEU A 142 ? ? -34.74 115.44 32 4 PRO A 144 ? ? -48.88 -16.05 33 4 ARG A 150 ? ? -82.50 46.80 34 4 ARG A 160 ? ? -98.57 46.67 35 4 SER A 183 ? ? 75.02 40.71 36 4 ARG A 185 ? ? -116.57 77.99 37 4 ASN A 186 ? ? 37.81 40.01 38 4 ARG A 188 ? ? -38.59 155.20 39 4 LYS A 191 ? ? -35.38 126.40 40 4 THR A 211 ? ? -38.01 99.50 41 4 ARG A 214 ? ? -54.51 109.90 42 4 ALA A 224 ? ? -59.09 107.53 43 4 GLN A 226 ? ? -94.70 41.00 44 4 ARG A 231 ? ? -92.31 56.68 45 4 SER A 236 ? ? -59.31 106.01 46 4 SER A 237 ? ? -128.02 -55.99 47 5 SER A 129 ? ? 34.36 52.14 48 5 LYS A 132 ? ? 34.42 45.39 49 5 PRO A 144 ? ? -47.40 -17.36 50 5 ARG A 150 ? ? -82.29 39.57 51 5 ARG A 160 ? ? -109.34 51.63 52 5 SER A 183 ? ? -106.35 77.42 53 5 ASN A 186 ? ? -133.32 -43.04 54 5 THR A 211 ? ? -35.41 107.48 55 5 ARG A 214 ? ? -59.49 100.17 56 5 ARG A 231 ? ? -108.14 62.45 57 6 SER A 126 ? ? -53.94 170.96 58 6 LEU A 142 ? ? -35.83 131.86 59 6 THR A 211 ? ? -35.68 104.92 60 6 ARG A 214 ? ? -41.47 104.93 61 6 SER A 236 ? ? -52.01 108.52 62 7 PRO A 134 ? ? -45.57 109.24 63 7 PRO A 138 ? ? -77.26 -168.54 64 7 ARG A 150 ? ? -83.97 38.73 65 7 ALA A 158 ? ? -48.12 169.19 66 7 ARG A 160 ? ? -99.45 45.43 67 7 SER A 183 ? ? -99.63 44.11 68 7 ARG A 188 ? ? -82.36 44.15 69 7 THR A 211 ? ? -35.65 120.09 70 7 ARG A 214 ? ? -50.01 105.28 71 8 SER A 127 ? ? -121.75 -53.65 72 8 PRO A 138 ? ? -47.04 153.09 73 8 ASN A 141 ? ? -53.47 179.12 74 8 LEU A 142 ? ? -39.18 107.83 75 8 ARG A 150 ? ? -91.61 37.20 76 8 THR A 211 ? ? -36.39 110.20 77 8 ARG A 214 ? ? -50.21 105.42 78 8 LYS A 229 ? ? -56.72 -71.06 79 8 LEU A 232 ? ? -36.54 125.15 80 8 SER A 236 ? ? -174.42 128.33 81 9 ASN A 141 ? ? -40.54 155.02 82 9 LEU A 142 ? ? -35.58 136.59 83 9 ARG A 150 ? ? -95.95 48.27 84 9 ARG A 185 ? ? -64.60 99.31 85 9 SER A 187 ? ? -93.04 40.75 86 9 THR A 211 ? ? -34.48 112.11 87 9 ARG A 214 ? ? -49.92 106.84 88 9 SER A 225 ? ? -98.81 51.94 89 10 SER A 127 ? ? -173.15 140.05 90 10 ARG A 150 ? ? -87.68 48.58 91 10 ARG A 160 ? ? -107.39 46.73 92 10 LEU A 210 ? ? -37.45 -31.74 93 10 THR A 211 ? ? -34.45 103.49 94 10 ARG A 214 ? ? -56.42 109.90 95 10 SER A 225 ? ? -89.35 36.04 96 10 GLN A 226 ? ? -84.35 33.57 97 10 ARG A 231 ? ? -91.13 44.29 98 11 LYS A 132 ? ? -67.82 80.19 99 11 ARG A 136 ? ? -106.85 53.79 100 11 SER A 187 ? ? -37.99 155.42 101 11 LYS A 191 ? ? -83.45 -73.68 102 11 THR A 211 ? ? -35.72 106.42 103 11 ARG A 214 ? ? -49.31 106.79 104 11 GLN A 226 ? ? -99.32 48.82 105 12 ASN A 141 ? ? -38.23 129.65 106 12 ARG A 160 ? ? -113.89 54.34 107 12 ASP A 165 ? ? -35.67 -36.42 108 12 ASN A 186 ? ? -45.44 101.38 109 12 THR A 211 ? ? -38.07 102.71 110 12 ARG A 214 ? ? -48.13 103.15 111 12 GLN A 226 ? ? -94.98 40.66 112 12 ALA A 227 ? ? -98.00 -65.47 113 12 LEU A 232 ? ? -37.11 131.20 114 13 SER A 129 ? ? -95.66 -66.29 115 13 PRO A 138 ? ? -46.86 163.40 116 13 VAL A 139 ? ? -91.36 37.85 117 13 PRO A 144 ? ? -46.85 -19.13 118 13 ALA A 158 ? ? -55.77 175.49 119 13 ARG A 160 ? ? -103.43 48.08 120 13 THR A 211 ? ? -36.93 98.69 121 13 ARG A 214 ? ? -55.79 108.14 122 13 PRO A 219 ? ? -49.07 153.96 123 13 GLU A 228 ? ? -38.45 -39.56 124 13 LYS A 229 ? ? -61.59 -70.28 125 13 SER A 233 ? ? -68.93 90.62 126 14 SER A 126 ? ? -68.79 95.56 127 14 PRO A 138 ? ? -45.95 173.64 128 14 ASN A 141 ? ? -36.96 151.98 129 14 ARG A 150 ? ? -89.88 42.50 130 14 THR A 211 ? ? -35.86 105.59 131 14 ARG A 214 ? ? -57.79 106.45 132 14 GLN A 226 ? ? -61.48 76.04 133 14 ALA A 227 ? ? -125.28 -50.77 134 15 LEU A 142 ? ? -36.57 128.04 135 15 SER A 190 ? ? -54.54 177.53 136 15 THR A 211 ? ? -35.61 103.08 137 15 GLN A 226 ? ? -86.03 35.40 138 16 PRO A 138 ? ? -45.73 150.14 139 16 LEU A 142 ? ? -54.05 177.47 140 16 PRO A 144 ? ? -45.97 -18.81 141 16 ARG A 150 ? ? -83.67 38.48 142 16 ALA A 158 ? ? -55.26 177.52 143 16 ARG A 160 ? ? -97.81 39.97 144 16 ARG A 185 ? ? -39.91 136.67 145 16 SER A 187 ? ? -127.36 -54.17 146 16 LYS A 191 ? ? -175.00 108.86 147 16 THR A 211 ? ? -38.34 114.00 148 16 ASN A 230 ? ? -34.39 -39.97 149 16 ARG A 231 ? ? -104.30 75.80 150 16 LEU A 232 ? ? -162.59 116.60 151 17 ARG A 150 ? ? -90.19 34.94 152 17 ARG A 189 ? ? -35.41 99.91 153 17 THR A 211 ? ? -36.74 116.25 154 17 ARG A 214 ? ? -48.81 109.52 155 17 PRO A 219 ? ? -49.10 153.73 156 17 SER A 237 ? ? -39.80 116.57 157 18 SER A 130 ? ? -171.92 141.40 158 18 LYS A 132 ? ? -172.09 133.99 159 18 SER A 133 ? ? -54.38 108.77 160 18 PRO A 134 ? ? -44.64 163.22 161 18 GLU A 137 ? ? -36.01 141.84 162 18 ASN A 141 ? ? -36.83 111.41 163 18 ARG A 150 ? ? -83.04 42.96 164 18 ALA A 158 ? ? -52.89 -175.59 165 18 ARG A 188 ? ? -34.46 133.19 166 18 THR A 211 ? ? -36.85 107.20 167 18 ARG A 214 ? ? -56.50 108.34 168 18 GLN A 226 ? ? -91.30 44.41 169 18 ARG A 231 ? ? -106.83 77.94 170 18 PRO A 235 ? ? -78.24 38.46 171 19 LEU A 142 ? ? -49.16 178.88 172 19 ARG A 150 ? ? -85.92 33.43 173 19 SER A 187 ? ? -100.84 41.95 174 19 ARG A 189 ? ? -80.50 43.18 175 19 THR A 211 ? ? -36.75 101.83 176 19 ARG A 214 ? ? -45.90 106.46 177 19 GLN A 226 ? ? -104.43 40.44 178 19 ARG A 231 ? ? -89.97 34.96 179 20 PRO A 134 ? ? -77.70 39.83 180 20 ARG A 150 ? ? -86.73 39.83 181 20 ARG A 160 ? ? -108.29 43.67 182 20 THR A 211 ? ? -33.97 123.59 183 20 ARG A 214 ? ? -51.49 99.82 184 20 ALA A 224 ? ? -43.33 153.45 185 20 GLN A 226 ? ? -105.41 44.10 #