data_2CQL # _entry.id 2CQL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2CQL pdb_00002cql 10.2210/pdb2cql/pdb RCSB RCSB024512 ? ? WWPDB D_1000024512 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hss001000008.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2CQL _pdbx_database_status.recvd_initial_deposition_date 2005-05-20 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Suzuki, S.' 1 'Muto, Y.' 2 'Inoue, M.' 3 'Kigawa, T.' 4 'Terada, T.' 5 'Shirouzu, M.' 6 'Yokoyama, S.' 7 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 8 # _citation.id primary _citation.title 'Solution structure of the N-terminal domain of human ribosomal protein L9' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Suzuki, S.' 1 ? primary 'Muto, Y.' 2 ? primary 'Inoue, M.' 3 ? primary 'Kigawa, T.' 4 ? primary 'Terada, T.' 5 ? primary 'Shirouzu, M.' 6 ? primary 'Yokoyama, S.' 7 ? # _cell.entry_id 2CQL _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2CQL _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description '60S ribosomal protein L9' _entity.formula_weight 10946.706 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'N-terminal domain' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name OK/SW-cl.103 # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGMKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKWWGNRKELATVRTI CSHVQNMIKGVTLGSGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGMKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKWWGNRKELATVRTI CSHVQNMIKGVTLGSGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hss001000008.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 MET n 1 9 LYS n 1 10 THR n 1 11 ILE n 1 12 LEU n 1 13 SER n 1 14 ASN n 1 15 GLN n 1 16 THR n 1 17 VAL n 1 18 ASP n 1 19 ILE n 1 20 PRO n 1 21 GLU n 1 22 ASN n 1 23 VAL n 1 24 ASP n 1 25 ILE n 1 26 THR n 1 27 LEU n 1 28 LYS n 1 29 GLY n 1 30 ARG n 1 31 THR n 1 32 VAL n 1 33 ILE n 1 34 VAL n 1 35 LYS n 1 36 GLY n 1 37 PRO n 1 38 ARG n 1 39 GLY n 1 40 THR n 1 41 LEU n 1 42 ARG n 1 43 ARG n 1 44 ASP n 1 45 PHE n 1 46 ASN n 1 47 HIS n 1 48 ILE n 1 49 ASN n 1 50 VAL n 1 51 GLU n 1 52 LEU n 1 53 SER n 1 54 LEU n 1 55 LEU n 1 56 GLY n 1 57 LYS n 1 58 LYS n 1 59 LYS n 1 60 LYS n 1 61 ARG n 1 62 LEU n 1 63 ARG n 1 64 VAL n 1 65 ASP n 1 66 LYS n 1 67 TRP n 1 68 TRP n 1 69 GLY n 1 70 ASN n 1 71 ARG n 1 72 LYS n 1 73 GLU n 1 74 LEU n 1 75 ALA n 1 76 THR n 1 77 VAL n 1 78 ARG n 1 79 THR n 1 80 ILE n 1 81 CYS n 1 82 SER n 1 83 HIS n 1 84 VAL n 1 85 GLN n 1 86 ASN n 1 87 MET n 1 88 ILE n 1 89 LYS n 1 90 GLY n 1 91 VAL n 1 92 THR n 1 93 LEU n 1 94 GLY n 1 95 SER n 1 96 GLY n 1 97 PRO n 1 98 SER n 1 99 SER n 1 100 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene RPL9 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P040712-07 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell-free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RL9_HUMAN _struct_ref.pdbx_db_accession P32969 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKWWGNRKELATVRTICSHVQNM IKGVTLG ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2CQL _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 94 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P32969 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 87 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 87 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2CQL GLY A 1 ? UNP P32969 ? ? 'cloning artifact' -6 1 1 2CQL SER A 2 ? UNP P32969 ? ? 'cloning artifact' -5 2 1 2CQL SER A 3 ? UNP P32969 ? ? 'cloning artifact' -4 3 1 2CQL GLY A 4 ? UNP P32969 ? ? 'cloning artifact' -3 4 1 2CQL SER A 5 ? UNP P32969 ? ? 'cloning artifact' -2 5 1 2CQL SER A 6 ? UNP P32969 ? ? 'cloning artifact' -1 6 1 2CQL GLY A 7 ? UNP P32969 ? ? 'cloning artifact' 0 7 1 2CQL SER A 95 ? UNP P32969 ? ? 'cloning artifact' 88 8 1 2CQL GLY A 96 ? UNP P32969 ? ? 'cloning artifact' 89 9 1 2CQL PRO A 97 ? UNP P32969 ? ? 'cloning artifact' 90 10 1 2CQL SER A 98 ? UNP P32969 ? ? 'cloning artifact' 91 11 1 2CQL SER A 99 ? UNP P32969 ? ? 'cloning artifact' 92 12 1 2CQL GLY A 100 ? UNP P32969 ? ? 'cloning artifact' 93 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_15N-separated_NOESY 1 2 1 3D_13C-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1.4mM 13C/15N-PROTEIN; 20mM d-Tris-HCl; 100mM NaCl; 1mM d-DTT; 0.02% NaN3' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 700 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2CQL _pdbx_nmr_refine.method 'torsion angle dyanamics, simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_details.entry_id 2CQL _pdbx_nmr_details.text 'The structure was determined using triple-resonance NMR spectroscopy.' # _pdbx_nmr_ensemble.entry_id 2CQL _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2CQL _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 3.5 Bruker 1 processing NMRPipe 20031121 'Delaglio, F.' 2 'data analysis' NMRView 5.0.4 'Johnson, B.A.' 3 'data analysis' KUJIRA 0.9295 'Kobayashi, N.' 4 'data analysis' Olivia 1.10.5 'Yokochi, M.' 5 'structure solution' CYANA 2.0.17 'Guntert, P.' 6 refinement CYANA 2.0.17 'Guntert, P.' 7 # _exptl.entry_id 2CQL _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2CQL _struct.title 'Solution structure of the N-terminal domain of human ribosomal protein L9' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2CQL _struct_keywords.pdbx_keywords TRANSLATION _struct_keywords.text ;N-terminal domain, alpha and beta (a+b), Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, TRANSLATION ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id LYS _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 72 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id THR _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 92 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id LYS _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 65 _struct_conf.end_auth_comp_id THR _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 85 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 21 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLN A 15 ? ASP A 18 ? GLN A 8 ASP A 11 A 2 ARG A 61 ? VAL A 64 ? ARG A 54 VAL A 57 A 3 GLU A 51 ? LEU A 55 ? GLU A 44 LEU A 48 B 1 VAL A 23 ? LYS A 28 ? VAL A 16 LYS A 21 B 2 THR A 31 ? GLY A 36 ? THR A 24 GLY A 29 B 3 GLY A 39 ? ASP A 44 ? GLY A 32 ASP A 37 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 17 ? N VAL A 10 O LEU A 62 ? O LEU A 55 A 2 3 O ASP A 65 ? O ASP A 58 N GLU A 51 ? N GLU A 44 B 1 2 N ASP A 24 ? N ASP A 17 O LYS A 35 ? O LYS A 28 B 2 3 N VAL A 32 ? N VAL A 25 O ARG A 43 ? O ARG A 36 # _database_PDB_matrix.entry_id 2CQL _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2CQL _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -6 -6 GLY GLY A . n A 1 2 SER 2 -5 -5 SER SER A . n A 1 3 SER 3 -4 -4 SER SER A . n A 1 4 GLY 4 -3 -3 GLY GLY A . n A 1 5 SER 5 -2 -2 SER SER A . n A 1 6 SER 6 -1 -1 SER SER A . n A 1 7 GLY 7 0 0 GLY GLY A . n A 1 8 MET 8 1 1 MET MET A . n A 1 9 LYS 9 2 2 LYS LYS A . n A 1 10 THR 10 3 3 THR THR A . n A 1 11 ILE 11 4 4 ILE ILE A . n A 1 12 LEU 12 5 5 LEU LEU A . n A 1 13 SER 13 6 6 SER SER A . n A 1 14 ASN 14 7 7 ASN ASN A . n A 1 15 GLN 15 8 8 GLN GLN A . n A 1 16 THR 16 9 9 THR THR A . n A 1 17 VAL 17 10 10 VAL VAL A . n A 1 18 ASP 18 11 11 ASP ASP A . n A 1 19 ILE 19 12 12 ILE ILE A . n A 1 20 PRO 20 13 13 PRO PRO A . n A 1 21 GLU 21 14 14 GLU GLU A . n A 1 22 ASN 22 15 15 ASN ASN A . n A 1 23 VAL 23 16 16 VAL VAL A . n A 1 24 ASP 24 17 17 ASP ASP A . n A 1 25 ILE 25 18 18 ILE ILE A . n A 1 26 THR 26 19 19 THR THR A . n A 1 27 LEU 27 20 20 LEU LEU A . n A 1 28 LYS 28 21 21 LYS LYS A . n A 1 29 GLY 29 22 22 GLY GLY A . n A 1 30 ARG 30 23 23 ARG ARG A . n A 1 31 THR 31 24 24 THR THR A . n A 1 32 VAL 32 25 25 VAL VAL A . n A 1 33 ILE 33 26 26 ILE ILE A . n A 1 34 VAL 34 27 27 VAL VAL A . n A 1 35 LYS 35 28 28 LYS LYS A . n A 1 36 GLY 36 29 29 GLY GLY A . n A 1 37 PRO 37 30 30 PRO PRO A . n A 1 38 ARG 38 31 31 ARG ARG A . n A 1 39 GLY 39 32 32 GLY GLY A . n A 1 40 THR 40 33 33 THR THR A . n A 1 41 LEU 41 34 34 LEU LEU A . n A 1 42 ARG 42 35 35 ARG ARG A . n A 1 43 ARG 43 36 36 ARG ARG A . n A 1 44 ASP 44 37 37 ASP ASP A . n A 1 45 PHE 45 38 38 PHE PHE A . n A 1 46 ASN 46 39 39 ASN ASN A . n A 1 47 HIS 47 40 40 HIS HIS A . n A 1 48 ILE 48 41 41 ILE ILE A . n A 1 49 ASN 49 42 42 ASN ASN A . n A 1 50 VAL 50 43 43 VAL VAL A . n A 1 51 GLU 51 44 44 GLU GLU A . n A 1 52 LEU 52 45 45 LEU LEU A . n A 1 53 SER 53 46 46 SER SER A . n A 1 54 LEU 54 47 47 LEU LEU A . n A 1 55 LEU 55 48 48 LEU LEU A . n A 1 56 GLY 56 49 49 GLY GLY A . n A 1 57 LYS 57 50 50 LYS LYS A . n A 1 58 LYS 58 51 51 LYS LYS A . n A 1 59 LYS 59 52 52 LYS LYS A . n A 1 60 LYS 60 53 53 LYS LYS A . n A 1 61 ARG 61 54 54 ARG ARG A . n A 1 62 LEU 62 55 55 LEU LEU A . n A 1 63 ARG 63 56 56 ARG ARG A . n A 1 64 VAL 64 57 57 VAL VAL A . n A 1 65 ASP 65 58 58 ASP ASP A . n A 1 66 LYS 66 59 59 LYS LYS A . n A 1 67 TRP 67 60 60 TRP TRP A . n A 1 68 TRP 68 61 61 TRP TRP A . n A 1 69 GLY 69 62 62 GLY GLY A . n A 1 70 ASN 70 63 63 ASN ASN A . n A 1 71 ARG 71 64 64 ARG ARG A . n A 1 72 LYS 72 65 65 LYS LYS A . n A 1 73 GLU 73 66 66 GLU GLU A . n A 1 74 LEU 74 67 67 LEU LEU A . n A 1 75 ALA 75 68 68 ALA ALA A . n A 1 76 THR 76 69 69 THR THR A . n A 1 77 VAL 77 70 70 VAL VAL A . n A 1 78 ARG 78 71 71 ARG ARG A . n A 1 79 THR 79 72 72 THR THR A . n A 1 80 ILE 80 73 73 ILE ILE A . n A 1 81 CYS 81 74 74 CYS CYS A . n A 1 82 SER 82 75 75 SER SER A . n A 1 83 HIS 83 76 76 HIS HIS A . n A 1 84 VAL 84 77 77 VAL VAL A . n A 1 85 GLN 85 78 78 GLN GLN A . n A 1 86 ASN 86 79 79 ASN ASN A . n A 1 87 MET 87 80 80 MET MET A . n A 1 88 ILE 88 81 81 ILE ILE A . n A 1 89 LYS 89 82 82 LYS LYS A . n A 1 90 GLY 90 83 83 GLY GLY A . n A 1 91 VAL 91 84 84 VAL VAL A . n A 1 92 THR 92 85 85 THR THR A . n A 1 93 LEU 93 86 86 LEU LEU A . n A 1 94 GLY 94 87 87 GLY GLY A . n A 1 95 SER 95 88 88 SER SER A . n A 1 96 GLY 96 89 89 GLY GLY A . n A 1 97 PRO 97 90 90 PRO PRO A . n A 1 98 SER 98 91 91 SER SER A . n A 1 99 SER 99 92 92 SER SER A . n A 1 100 GLY 100 93 93 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-11-20 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A -5 ? ? -39.36 148.30 2 1 THR A 3 ? ? -67.81 80.44 3 1 PRO A 13 ? ? -69.74 -165.63 4 1 PRO A 30 ? ? -69.77 1.55 5 1 HIS A 40 ? ? -38.88 -26.25 6 1 LYS A 53 ? ? -56.50 93.84 7 1 TRP A 60 ? ? -39.83 100.42 8 2 SER A -4 ? ? -45.73 164.96 9 2 PRO A 13 ? ? -69.65 -164.99 10 2 PRO A 30 ? ? -69.71 2.10 11 2 LYS A 53 ? ? -57.54 106.94 12 2 ASN A 63 ? ? -54.81 -175.15 13 3 LYS A 2 ? ? -172.34 125.56 14 3 THR A 3 ? ? -65.63 79.80 15 3 PRO A 13 ? ? -69.85 -165.44 16 3 LYS A 51 ? ? -123.80 -63.72 17 3 LYS A 52 ? ? -134.79 -75.09 18 3 TRP A 60 ? ? -39.77 110.65 19 3 TRP A 61 ? ? -64.61 98.81 20 3 ASN A 63 ? ? -51.60 -174.88 21 3 LEU A 86 ? ? -130.98 -45.17 22 4 LEU A 5 ? ? -96.12 54.43 23 4 PRO A 13 ? ? -69.79 -166.87 24 4 LYS A 53 ? ? -46.81 108.59 25 4 TRP A 60 ? ? -39.82 127.10 26 4 ASN A 63 ? ? -61.86 -176.37 27 5 SER A -1 ? ? -59.64 170.30 28 5 ILE A 4 ? ? -38.28 134.97 29 5 PRO A 13 ? ? -69.72 -169.91 30 5 PRO A 30 ? ? -69.75 1.73 31 5 HIS A 40 ? ? -36.88 -31.02 32 5 LYS A 51 ? ? -133.55 -65.43 33 5 LYS A 52 ? ? -124.09 -65.68 34 5 TRP A 60 ? ? -40.56 99.50 35 5 TRP A 61 ? ? -39.93 141.87 36 5 ASN A 63 ? ? -68.30 -177.11 37 5 LEU A 86 ? ? -124.93 -56.11 38 6 MET A 1 ? ? -67.91 88.61 39 6 PRO A 13 ? ? -69.79 -168.82 40 6 PRO A 30 ? ? -69.81 2.36 41 6 HIS A 40 ? ? -36.80 -32.17 42 6 TRP A 60 ? ? -46.19 173.03 43 6 ASN A 63 ? ? -58.18 -174.68 44 7 ILE A 4 ? ? -58.85 78.59 45 7 PRO A 13 ? ? -69.76 -176.84 46 7 PRO A 30 ? ? -69.70 0.58 47 7 TRP A 60 ? ? -39.53 129.21 48 7 SER A 88 ? ? -174.67 128.51 49 8 ILE A 4 ? ? -38.77 158.81 50 8 PRO A 13 ? ? -69.84 -171.40 51 8 PRO A 30 ? ? -69.79 2.56 52 8 LYS A 51 ? ? -131.24 -41.40 53 8 LYS A 53 ? ? -41.47 109.82 54 8 TRP A 60 ? ? -53.65 174.92 55 8 ASN A 63 ? ? -36.09 153.09 56 8 SER A 88 ? ? -69.82 76.73 57 8 PRO A 90 ? ? -69.78 95.43 58 9 PRO A 13 ? ? -69.76 -166.98 59 9 PRO A 30 ? ? -69.77 1.42 60 9 ASN A 63 ? ? -51.50 -174.47 61 9 LEU A 86 ? ? -125.24 -51.23 62 9 PRO A 90 ? ? -69.73 94.66 63 10 MET A 1 ? ? -90.00 47.83 64 10 LEU A 5 ? ? -171.03 -175.09 65 10 PRO A 13 ? ? -69.74 -166.96 66 10 ASN A 42 ? ? -93.05 41.94 67 10 LYS A 53 ? ? -46.94 107.99 68 10 TRP A 60 ? ? -59.51 173.86 69 10 ASN A 63 ? ? -51.56 -174.62 70 10 LEU A 86 ? ? -124.79 -52.09 71 11 SER A -1 ? ? -95.38 -60.91 72 11 MET A 1 ? ? -89.91 41.15 73 11 THR A 3 ? ? -96.39 32.78 74 11 ILE A 4 ? ? -50.25 105.98 75 11 PRO A 13 ? ? -69.77 -172.99 76 11 PRO A 30 ? ? -69.75 2.50 77 11 LYS A 51 ? ? -124.26 -53.97 78 11 LYS A 53 ? ? -51.72 109.08 79 11 TRP A 60 ? ? -39.72 145.81 80 11 ASN A 63 ? ? -60.31 -175.36 81 11 SER A 92 ? ? 71.27 41.82 82 12 THR A 3 ? ? -62.51 81.86 83 12 PRO A 13 ? ? -69.77 -164.43 84 12 LYS A 52 ? ? -129.62 -65.39 85 12 TRP A 60 ? ? -39.45 97.28 86 12 ASN A 63 ? ? -56.88 -177.69 87 12 SER A 91 ? ? -52.72 95.17 88 13 SER A -1 ? ? -94.83 38.77 89 13 LEU A 5 ? ? -47.14 175.32 90 13 PRO A 13 ? ? -69.86 -170.60 91 13 PRO A 30 ? ? -69.68 2.51 92 13 LYS A 52 ? ? -129.34 -70.17 93 13 TRP A 60 ? ? -48.58 101.18 94 14 SER A -4 ? ? -165.70 117.27 95 14 PRO A 13 ? ? -69.71 -176.42 96 14 PRO A 30 ? ? -69.72 1.05 97 14 HIS A 40 ? ? -36.18 -30.13 98 14 LYS A 53 ? ? -46.31 101.79 99 14 TRP A 61 ? ? -39.64 101.50 100 14 LEU A 86 ? ? -120.65 -58.54 101 14 PRO A 90 ? ? -69.87 0.62 102 15 MET A 1 ? ? -44.06 106.82 103 15 PRO A 13 ? ? -69.68 -170.46 104 15 PRO A 30 ? ? -69.69 0.34 105 15 HIS A 40 ? ? -39.44 -28.23 106 15 LYS A 53 ? ? -45.20 109.62 107 15 TRP A 60 ? ? -39.56 152.24 108 15 ASN A 63 ? ? -53.51 -176.67 109 15 SER A 91 ? ? -36.08 94.85 110 16 LEU A 5 ? ? -45.23 160.63 111 16 PRO A 13 ? ? -69.69 -167.36 112 16 PRO A 30 ? ? -69.75 2.81 113 16 LYS A 51 ? ? -131.53 -50.15 114 16 TRP A 60 ? ? -42.45 157.90 115 16 ASN A 63 ? ? -51.24 177.91 116 16 SER A 88 ? ? -175.00 133.75 117 16 SER A 92 ? ? -66.09 90.93 118 17 SER A -5 ? ? -50.93 101.43 119 17 LYS A 2 ? ? -56.05 172.18 120 17 THR A 3 ? ? -95.85 49.95 121 17 PRO A 13 ? ? -69.77 -167.57 122 17 PRO A 30 ? ? -69.75 3.01 123 17 HIS A 40 ? ? -35.83 -30.76 124 17 ASN A 63 ? ? -53.52 178.69 125 17 SER A 88 ? ? -44.61 155.42 126 17 SER A 91 ? ? -42.23 97.63 127 18 PRO A 13 ? ? -69.80 -168.00 128 18 PRO A 30 ? ? -69.76 0.43 129 18 LYS A 53 ? ? -43.68 106.92 130 18 TRP A 60 ? ? -44.89 94.53 131 18 ASN A 63 ? ? -58.81 -177.01 132 19 MET A 1 ? ? -113.69 57.60 133 19 ILE A 4 ? ? -36.46 110.23 134 19 PRO A 13 ? ? -69.77 -174.78 135 19 PRO A 30 ? ? -69.79 2.80 136 19 LYS A 52 ? ? -132.66 -74.06 137 19 TRP A 60 ? ? -39.73 118.53 138 19 TRP A 61 ? ? -69.18 95.12 139 20 SER A -2 ? ? -84.84 42.51 140 20 THR A 3 ? ? -81.39 40.38 141 20 PRO A 13 ? ? -69.72 -167.36 142 20 HIS A 40 ? ? -35.08 -33.45 143 20 LYS A 51 ? ? -134.28 -37.83 144 20 LYS A 53 ? ? -59.03 106.26 145 20 TRP A 60 ? ? -55.09 100.65 146 20 ASN A 63 ? ? -54.26 175.26 147 20 SER A 92 ? ? -39.10 155.83 #