data_2CQP # _entry.id 2CQP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2CQP pdb_00002cqp 10.2210/pdb2cqp/pdb RCSB RCSB024516 ? ? WWPDB D_1000024516 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id mmt008001000.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2CQP _pdbx_database_status.recvd_initial_deposition_date 2005-05-20 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Suzuki, S.' 1 'Muto, Y.' 2 'Inoue, M.' 3 'Kigawa, T.' 4 'Terada, T.' 5 'Shirouzu, M.' 6 'Yokoyama, S.' 7 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 8 # _citation.id primary _citation.title 'Solution structure of the RNA binding domain of RNA-binding protein 12' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Suzuki, S.' 1 ? primary 'Muto, Y.' 2 ? primary 'Inoue, M.' 3 ? primary 'Kigawa, T.' 4 ? primary 'Terada, T.' 5 ? primary 'Shirouzu, M.' 6 ? primary 'Yokoyama, S.' 7 ? # _cell.entry_id 2CQP _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2CQP _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'RNA-binding protein 12' _entity.formula_weight 10194.504 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'RNA recognition motif' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'RNA binding motif protein 12, SH3/WW domain anchor protein in the nucleus, SWAN' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGASSGKPGPTIIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDLNDR PIGSRKVKLVLGSGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGASSGKPGPTIIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDLNDR PIGSRKVKLVLGSGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier mmt008001000.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 ALA n 1 9 SER n 1 10 SER n 1 11 GLY n 1 12 LYS n 1 13 PRO n 1 14 GLY n 1 15 PRO n 1 16 THR n 1 17 ILE n 1 18 ILE n 1 19 LYS n 1 20 VAL n 1 21 GLN n 1 22 ASN n 1 23 MET n 1 24 PRO n 1 25 PHE n 1 26 THR n 1 27 VAL n 1 28 SER n 1 29 ILE n 1 30 ASP n 1 31 GLU n 1 32 ILE n 1 33 LEU n 1 34 ASP n 1 35 PHE n 1 36 PHE n 1 37 TYR n 1 38 GLY n 1 39 TYR n 1 40 GLN n 1 41 VAL n 1 42 ILE n 1 43 PRO n 1 44 GLY n 1 45 SER n 1 46 VAL n 1 47 CYS n 1 48 LEU n 1 49 LYS n 1 50 TYR n 1 51 ASN n 1 52 GLU n 1 53 LYS n 1 54 GLY n 1 55 MET n 1 56 PRO n 1 57 THR n 1 58 GLY n 1 59 GLU n 1 60 ALA n 1 61 MET n 1 62 VAL n 1 63 ALA n 1 64 PHE n 1 65 GLU n 1 66 SER n 1 67 ARG n 1 68 ASP n 1 69 GLU n 1 70 ALA n 1 71 THR n 1 72 ALA n 1 73 ALA n 1 74 VAL n 1 75 ILE n 1 76 ASP n 1 77 LEU n 1 78 ASN n 1 79 ASP n 1 80 ARG n 1 81 PRO n 1 82 ILE n 1 83 GLY n 1 84 SER n 1 85 ARG n 1 86 LYS n 1 87 VAL n 1 88 LYS n 1 89 LEU n 1 90 VAL n 1 91 LEU n 1 92 GLY n 1 93 SER n 1 94 GLY n 1 95 PRO n 1 96 SER n 1 97 SER n 1 98 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'house mouse' _entity_src_gen.gene_src_genus Mus _entity_src_gen.pdbx_gene_src_gene Rbm12 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P041220-02 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell-free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RBM12_MOUSE _struct_ref.pdbx_db_accession Q8R4X3 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;ASSGKPGPTIIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDLNDRPIGSRKV KLVLG ; _struct_ref.pdbx_align_begin 918 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2CQP _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 92 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8R4X3 _struct_ref_seq.db_align_beg 918 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 1002 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 918 _struct_ref_seq.pdbx_auth_seq_align_end 1002 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2CQP GLY A 1 ? UNP Q8R4X3 ? ? 'cloning artifact' 911 1 1 2CQP SER A 2 ? UNP Q8R4X3 ? ? 'cloning artifact' 912 2 1 2CQP SER A 3 ? UNP Q8R4X3 ? ? 'cloning artifact' 913 3 1 2CQP GLY A 4 ? UNP Q8R4X3 ? ? 'cloning artifact' 914 4 1 2CQP SER A 5 ? UNP Q8R4X3 ? ? 'cloning artifact' 915 5 1 2CQP SER A 6 ? UNP Q8R4X3 ? ? 'cloning artifact' 916 6 1 2CQP GLY A 7 ? UNP Q8R4X3 ? ? 'cloning artifact' 917 7 1 2CQP SER A 93 ? UNP Q8R4X3 ? ? 'cloning artifact' 1003 8 1 2CQP GLY A 94 ? UNP Q8R4X3 ? ? 'cloning artifact' 1004 9 1 2CQP PRO A 95 ? UNP Q8R4X3 ? ? 'cloning artifact' 1005 10 1 2CQP SER A 96 ? UNP Q8R4X3 ? ? 'cloning artifact' 1006 11 1 2CQP SER A 97 ? UNP Q8R4X3 ? ? 'cloning artifact' 1007 12 1 2CQP GLY A 98 ? UNP Q8R4X3 ? ? 'cloning artifact' 1008 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_15N-separated_NOESY 1 2 1 3D_13C-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1.3mM 13C/15N-PROTEIN; 20mM d-Tris-HCl(pH7.0); 100mM NaCl; 1mM d-DTT; 0.02% NaN3' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 700 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2CQP _pdbx_nmr_refine.method 'torsion angle dyanamics, simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_details.entry_id 2CQP _pdbx_nmr_details.text 'The structure was determined using triple-resonance NMR spectroscopy.' # _pdbx_nmr_ensemble.entry_id 2CQP _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2CQP _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 3.5 Bruker 1 processing NMRPipe 20031121 'Delaglio, F.' 2 'data analysis' NMRView 5.0.4 'Johnson, B.A.' 3 'data analysis' KUJIRA 0.9295 'Kobayashi, N.' 4 'data analysis' Olivia 1.10.5 'Yokochi, M.' 5 'structure solution' CYANA 2.0.17 'Guntert, P.' 6 refinement CYANA 2.0.17 'Guntert, P.' 7 # _exptl.entry_id 2CQP _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2CQP _struct.title 'Solution structure of the RNA binding domain of RNA-binding protein 12' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2CQP _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN' _struct_keywords.text ;RNA recognition motif, RRM, RNA binding domain, RBD, RNP, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, RNA BINDING PROTEIN ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ILE A 29 ? PHE A 35 ? ILE A 939 PHE A 945 1 ? 7 HELX_P HELX_P2 2 ARG A 67 ? ASP A 76 ? ARG A 977 ASP A 986 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLY 94 A . ? GLY 1004 A PRO 95 A ? PRO 1005 A 1 0.02 2 GLY 94 A . ? GLY 1004 A PRO 95 A ? PRO 1005 A 2 0.03 3 GLY 94 A . ? GLY 1004 A PRO 95 A ? PRO 1005 A 3 0.07 4 GLY 94 A . ? GLY 1004 A PRO 95 A ? PRO 1005 A 4 0.06 5 GLY 94 A . ? GLY 1004 A PRO 95 A ? PRO 1005 A 5 0.01 6 GLY 94 A . ? GLY 1004 A PRO 95 A ? PRO 1005 A 6 0.11 7 GLY 94 A . ? GLY 1004 A PRO 95 A ? PRO 1005 A 7 0.15 8 GLY 94 A . ? GLY 1004 A PRO 95 A ? PRO 1005 A 8 0.05 9 GLY 94 A . ? GLY 1004 A PRO 95 A ? PRO 1005 A 9 0.02 10 GLY 94 A . ? GLY 1004 A PRO 95 A ? PRO 1005 A 10 0.13 11 GLY 94 A . ? GLY 1004 A PRO 95 A ? PRO 1005 A 11 0.00 12 GLY 94 A . ? GLY 1004 A PRO 95 A ? PRO 1005 A 12 0.14 13 GLY 94 A . ? GLY 1004 A PRO 95 A ? PRO 1005 A 13 0.12 14 GLY 94 A . ? GLY 1004 A PRO 95 A ? PRO 1005 A 14 -0.02 15 GLY 94 A . ? GLY 1004 A PRO 95 A ? PRO 1005 A 15 0.05 16 GLY 94 A . ? GLY 1004 A PRO 95 A ? PRO 1005 A 16 0.07 17 GLY 94 A . ? GLY 1004 A PRO 95 A ? PRO 1005 A 17 0.10 18 GLY 94 A . ? GLY 1004 A PRO 95 A ? PRO 1005 A 18 0.04 19 GLY 94 A . ? GLY 1004 A PRO 95 A ? PRO 1005 A 19 0.06 20 GLY 94 A . ? GLY 1004 A PRO 95 A ? PRO 1005 A 20 0.04 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 CYS A 47 ? LYS A 49 ? CYS A 957 LYS A 959 A 2 GLU A 59 ? PHE A 64 ? GLU A 969 PHE A 974 A 3 THR A 16 ? GLN A 21 ? THR A 926 GLN A 931 A 4 LYS A 88 ? LEU A 91 ? LYS A 998 LEU A 1001 B 1 ARG A 80 ? ILE A 82 ? ARG A 990 ILE A 992 B 2 ARG A 85 ? VAL A 87 ? ARG A 995 VAL A 997 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N CYS A 47 ? N CYS A 957 O MET A 61 ? O MET A 971 A 2 3 O ALA A 60 ? O ALA A 970 N VAL A 20 ? N VAL A 930 A 3 4 N GLN A 21 ? N GLN A 931 O LYS A 88 ? O LYS A 998 B 1 2 N ILE A 82 ? N ILE A 992 O ARG A 85 ? O ARG A 995 # _database_PDB_matrix.entry_id 2CQP _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2CQP _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 911 911 GLY GLY A . n A 1 2 SER 2 912 912 SER SER A . n A 1 3 SER 3 913 913 SER SER A . n A 1 4 GLY 4 914 914 GLY GLY A . n A 1 5 SER 5 915 915 SER SER A . n A 1 6 SER 6 916 916 SER SER A . n A 1 7 GLY 7 917 917 GLY GLY A . n A 1 8 ALA 8 918 918 ALA ALA A . n A 1 9 SER 9 919 919 SER SER A . n A 1 10 SER 10 920 920 SER SER A . n A 1 11 GLY 11 921 921 GLY GLY A . n A 1 12 LYS 12 922 922 LYS LYS A . n A 1 13 PRO 13 923 923 PRO PRO A . n A 1 14 GLY 14 924 924 GLY GLY A . n A 1 15 PRO 15 925 925 PRO PRO A . n A 1 16 THR 16 926 926 THR THR A . n A 1 17 ILE 17 927 927 ILE ILE A . n A 1 18 ILE 18 928 928 ILE ILE A . n A 1 19 LYS 19 929 929 LYS LYS A . n A 1 20 VAL 20 930 930 VAL VAL A . n A 1 21 GLN 21 931 931 GLN GLN A . n A 1 22 ASN 22 932 932 ASN ASN A . n A 1 23 MET 23 933 933 MET MET A . n A 1 24 PRO 24 934 934 PRO PRO A . n A 1 25 PHE 25 935 935 PHE PHE A . n A 1 26 THR 26 936 936 THR THR A . n A 1 27 VAL 27 937 937 VAL VAL A . n A 1 28 SER 28 938 938 SER SER A . n A 1 29 ILE 29 939 939 ILE ILE A . n A 1 30 ASP 30 940 940 ASP ASP A . n A 1 31 GLU 31 941 941 GLU GLU A . n A 1 32 ILE 32 942 942 ILE ILE A . n A 1 33 LEU 33 943 943 LEU LEU A . n A 1 34 ASP 34 944 944 ASP ASP A . n A 1 35 PHE 35 945 945 PHE PHE A . n A 1 36 PHE 36 946 946 PHE PHE A . n A 1 37 TYR 37 947 947 TYR TYR A . n A 1 38 GLY 38 948 948 GLY GLY A . n A 1 39 TYR 39 949 949 TYR TYR A . n A 1 40 GLN 40 950 950 GLN GLN A . n A 1 41 VAL 41 951 951 VAL VAL A . n A 1 42 ILE 42 952 952 ILE ILE A . n A 1 43 PRO 43 953 953 PRO PRO A . n A 1 44 GLY 44 954 954 GLY GLY A . n A 1 45 SER 45 955 955 SER SER A . n A 1 46 VAL 46 956 956 VAL VAL A . n A 1 47 CYS 47 957 957 CYS CYS A . n A 1 48 LEU 48 958 958 LEU LEU A . n A 1 49 LYS 49 959 959 LYS LYS A . n A 1 50 TYR 50 960 960 TYR TYR A . n A 1 51 ASN 51 961 961 ASN ASN A . n A 1 52 GLU 52 962 962 GLU GLU A . n A 1 53 LYS 53 963 963 LYS LYS A . n A 1 54 GLY 54 964 964 GLY GLY A . n A 1 55 MET 55 965 965 MET MET A . n A 1 56 PRO 56 966 966 PRO PRO A . n A 1 57 THR 57 967 967 THR THR A . n A 1 58 GLY 58 968 968 GLY GLY A . n A 1 59 GLU 59 969 969 GLU GLU A . n A 1 60 ALA 60 970 970 ALA ALA A . n A 1 61 MET 61 971 971 MET MET A . n A 1 62 VAL 62 972 972 VAL VAL A . n A 1 63 ALA 63 973 973 ALA ALA A . n A 1 64 PHE 64 974 974 PHE PHE A . n A 1 65 GLU 65 975 975 GLU GLU A . n A 1 66 SER 66 976 976 SER SER A . n A 1 67 ARG 67 977 977 ARG ARG A . n A 1 68 ASP 68 978 978 ASP ASP A . n A 1 69 GLU 69 979 979 GLU GLU A . n A 1 70 ALA 70 980 980 ALA ALA A . n A 1 71 THR 71 981 981 THR THR A . n A 1 72 ALA 72 982 982 ALA ALA A . n A 1 73 ALA 73 983 983 ALA ALA A . n A 1 74 VAL 74 984 984 VAL VAL A . n A 1 75 ILE 75 985 985 ILE ILE A . n A 1 76 ASP 76 986 986 ASP ASP A . n A 1 77 LEU 77 987 987 LEU LEU A . n A 1 78 ASN 78 988 988 ASN ASN A . n A 1 79 ASP 79 989 989 ASP ASP A . n A 1 80 ARG 80 990 990 ARG ARG A . n A 1 81 PRO 81 991 991 PRO PRO A . n A 1 82 ILE 82 992 992 ILE ILE A . n A 1 83 GLY 83 993 993 GLY GLY A . n A 1 84 SER 84 994 994 SER SER A . n A 1 85 ARG 85 995 995 ARG ARG A . n A 1 86 LYS 86 996 996 LYS LYS A . n A 1 87 VAL 87 997 997 VAL VAL A . n A 1 88 LYS 88 998 998 LYS LYS A . n A 1 89 LEU 89 999 999 LEU LEU A . n A 1 90 VAL 90 1000 1000 VAL VAL A . n A 1 91 LEU 91 1001 1001 LEU LEU A . n A 1 92 GLY 92 1002 1002 GLY GLY A . n A 1 93 SER 93 1003 1003 SER SER A . n A 1 94 GLY 94 1004 1004 GLY GLY A . n A 1 95 PRO 95 1005 1005 PRO PRO A . n A 1 96 SER 96 1006 1006 SER SER A . n A 1 97 SER 97 1007 1007 SER SER A . n A 1 98 GLY 98 1008 1008 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-11-20 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 923 ? ? -69.74 -170.59 2 1 VAL A 956 ? ? -41.32 100.13 3 1 ASN A 961 ? ? -67.95 -178.61 4 1 ASP A 989 ? ? 73.33 39.04 5 1 PRO A 991 ? ? -69.71 87.72 6 2 VAL A 937 ? ? -45.64 151.10 7 2 VAL A 956 ? ? -37.25 103.56 8 2 PRO A 991 ? ? -69.80 92.27 9 2 SER A 1003 ? ? -34.65 149.90 10 3 ALA A 918 ? ? -89.69 40.72 11 3 ASN A 932 ? ? 72.38 45.09 12 3 VAL A 956 ? ? -43.87 100.12 13 3 PRO A 991 ? ? -69.74 83.80 14 4 SER A 915 ? ? -40.77 160.41 15 4 GLN A 950 ? ? -69.56 89.61 16 4 VAL A 956 ? ? -43.87 107.48 17 4 PRO A 991 ? ? -69.69 85.70 18 4 SER A 1007 ? ? 34.52 44.12 19 5 SER A 915 ? ? -98.02 41.97 20 5 SER A 916 ? ? -168.28 115.73 21 5 SER A 919 ? ? -165.34 107.78 22 5 PRO A 923 ? ? -69.72 88.40 23 5 VAL A 956 ? ? -35.63 112.28 24 5 PRO A 991 ? ? -69.71 83.36 25 6 SER A 916 ? ? -105.89 -63.31 26 6 GLN A 950 ? ? -60.78 97.33 27 6 VAL A 956 ? ? -37.04 105.83 28 6 THR A 967 ? ? -90.32 37.70 29 6 PRO A 991 ? ? -69.73 85.51 30 6 SER A 1006 ? ? -59.31 98.63 31 7 SER A 912 ? ? 38.95 42.17 32 7 SER A 913 ? ? -35.96 128.51 33 7 SER A 920 ? ? 71.61 42.64 34 7 VAL A 956 ? ? -35.99 95.50 35 7 PRO A 991 ? ? -69.74 81.99 36 7 SER A 1003 ? ? -48.78 177.93 37 8 SER A 919 ? ? -82.36 45.67 38 8 GLN A 950 ? ? -69.58 92.31 39 8 VAL A 956 ? ? -40.00 97.32 40 8 PRO A 991 ? ? -69.74 84.46 41 9 SER A 915 ? ? -120.18 -56.89 42 9 GLN A 950 ? ? -65.59 83.69 43 9 VAL A 956 ? ? -34.62 114.97 44 9 PRO A 991 ? ? -69.76 94.61 45 10 SER A 919 ? ? -48.05 151.17 46 10 PRO A 923 ? ? -69.74 -176.50 47 10 VAL A 956 ? ? -34.79 112.12 48 10 PRO A 991 ? ? -69.80 85.64 49 11 SER A 916 ? ? -49.60 99.01 50 11 VAL A 937 ? ? -47.16 155.73 51 11 VAL A 956 ? ? -41.23 109.06 52 11 PRO A 991 ? ? -69.68 86.93 53 11 SER A 1003 ? ? -86.50 32.20 54 12 VAL A 956 ? ? -40.41 104.39 55 12 PRO A 991 ? ? -69.75 83.93 56 13 SER A 920 ? ? -108.87 -64.81 57 13 PRO A 923 ? ? -69.77 -172.22 58 13 VAL A 956 ? ? -38.39 110.65 59 13 PRO A 991 ? ? -69.78 81.42 60 13 SER A 1007 ? ? -37.06 113.98 61 14 SER A 912 ? ? -34.86 138.06 62 14 SER A 916 ? ? -86.32 34.03 63 14 PRO A 923 ? ? -69.74 -167.43 64 14 TYR A 947 ? ? -46.90 155.80 65 14 VAL A 956 ? ? -40.45 109.02 66 14 THR A 967 ? ? -95.25 35.55 67 14 PRO A 991 ? ? -69.72 87.29 68 14 SER A 1003 ? ? -58.14 108.03 69 14 SER A 1007 ? ? -59.31 96.82 70 15 SER A 916 ? ? -63.32 99.74 71 15 PRO A 923 ? ? -69.81 81.51 72 15 VAL A 956 ? ? -36.37 108.40 73 15 PRO A 991 ? ? -69.76 86.39 74 15 SER A 1003 ? ? -51.80 175.17 75 16 PRO A 925 ? ? -69.78 -176.86 76 16 TYR A 947 ? ? -49.38 154.97 77 16 VAL A 956 ? ? -36.32 95.82 78 16 THR A 967 ? ? -89.05 35.43 79 16 PRO A 991 ? ? -69.71 84.96 80 17 TYR A 947 ? ? -44.24 153.78 81 17 VAL A 956 ? ? -46.94 103.08 82 17 ASP A 989 ? ? 73.13 38.59 83 17 PRO A 991 ? ? -69.76 87.51 84 17 SER A 1003 ? ? 34.25 54.78 85 18 SER A 913 ? ? 73.84 48.19 86 18 SER A 916 ? ? -171.34 132.57 87 18 PRO A 923 ? ? -69.80 87.64 88 18 VAL A 937 ? ? -45.66 154.69 89 18 VAL A 956 ? ? -39.34 113.81 90 18 THR A 967 ? ? -99.37 37.70 91 18 PRO A 991 ? ? -69.74 82.47 92 19 PRO A 923 ? ? -69.76 -179.74 93 19 VAL A 956 ? ? -35.59 103.49 94 19 PRO A 991 ? ? -69.76 90.51 95 20 SER A 912 ? ? -68.34 94.33 96 20 ALA A 918 ? ? -130.59 -46.23 97 20 GLN A 950 ? ? -66.07 93.29 98 20 VAL A 956 ? ? -42.12 107.84 99 20 ASN A 961 ? ? -67.03 -175.04 100 20 PRO A 991 ? ? -69.76 82.91 101 20 SER A 1003 ? ? -174.30 -179.75 102 20 SER A 1007 ? ? -34.74 123.31 #